Shane D. Lavery - Publications

Affiliations: 
University of Auckland, Auckland, Auckland, New Zealand 
Area:
molecular ecology and evolution

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Plön S, Best PB, Duignan P, Lavery SD, Bernard RTF, Van Waerebeek K, Baker CS. Population structure of pygmy (Kogia breviceps) and dwarf (Kogia sima) sperm whales in the Southern Hemisphere may reflect foraging ecology and dispersal patterns. Advances in Marine Biology. 96: 85-114. PMID 37980130 DOI: 10.1016/bs.amb.2023.09.001  0.343
2022 Farhadi A, Jeffs AG, Lavery SD. Genome-wide SNPs in the spiny lobster Panulirus homarus reveal a hybrid origin for its subspecies. Bmc Genomics. 23: 750. PMID 36368918 DOI: 10.1186/s12864-022-08984-w  0.423
2022 van der Reis AL, Norrie CR, Jeffs AG, Lavery SD, Carroll EL. Genetic and particle modelling approaches to assessing population connectivity in a deep sea lobster. Scientific Reports. 12: 16783. PMID 36202873 DOI: 10.1038/s41598-022-19790-5  0.391
2022 Salloum PM, Santure AW, Lavery SD, de Villemereuil P. Finding the adaptive needles in a population-structured haystack: A case study in a New Zealand mollusc. The Journal of Animal Ecology. PMID 35318661 DOI: 10.1111/1365-2656.13692  0.773
2021 Withers SJ, Parsons S, Hauber ME, Kendrick A, Lavery SD. Genetic divergence between isolated populations of the North Island New Zealand Rifleman () implicates ancient biogeographic impacts rather than recent habitat fragmentation. Ecology and Evolution. 11: 5998-6014. PMID 34141198 DOI: 10.1002/ece3.7358  0.438
2020 Salloum PM, Villemereuil Pd, Santure AW, Waters JM, Lavery SD. Hitchhiking consequences for genetic and morphological patterns: the influence of kelp-rafting on a brooding chiton Biological Journal of the Linnean Society. 130: 756-770. DOI: 10.1093/Biolinnean/Blaa073  0.307
2019 Plön S, Thakur V, Parr L, Lavery SD. Phylogeography of the dugong (Dugong dugon) based on historical samples identifies vulnerable Indian Ocean populations. Plos One. 14: e0219350. PMID 31509531 DOI: 10.1371/Journal.Pone.0219350  0.537
2019 Jones AT, Lavery SD, Le Port A, Wang YG, Blower D, Ovenden J. Sweepstakes reproductive success is absent in a New Zealand snapper (Chrysophrus auratus) population protected from fishing despite 'tiny' Ne/N ratios elsewhere. Molecular Ecology. PMID 31087739 DOI: 10.1111/Mec.15130  0.332
2019 Ammon Uv, Wood SA, Laroche O, Zaiko A, Lavery SD, Inglis GJ, Pochon X. Linking Environmental DNA and RNA for Improved Detection of the Marine Invasive Fanworm Sabella spallanzanii Frontiers in Marine Science. 6. DOI: 10.3389/Fmars.2019.00621  0.378
2019 Roycroft EJ, Port AL, Lavery SD. Population structure and male-biased dispersal in the short-tail stingray Bathytoshia brevicaudata (Myliobatoidei: Dasyatidae) Conservation Genetics. 20: 717-728. DOI: 10.1007/S10592-019-01167-3  0.425
2018 Ammon UV, Wood SA, Laroche O, Zaiko A, Tait L, Lavery S, Inglis GJ, Pochon X. Combining morpho-taxonomy and metabarcoding enhances the detection of non-indigenous marine pests in biofouling communities. Scientific Reports. 8: 16290. PMID 30389965 DOI: 10.1038/S41598-018-34541-1  0.652
2018 van der Reis AL, Laroche O, Jeffs AG, Lavery SD. Preliminary analysis of New Zealand scampi () diet using metabarcoding. Peerj. 6: e5641. PMID 30258728 DOI: 10.7717/Peerj.5641  0.45
2018 Ammon UEv, Wood SA, Laroche O, Zaiko A, Tait L, Lavery S, Inglis G, Pochon X. The impact of artificial surfaces on marine bacterial and eukaryotic biofouling assemblages: A high-throughput sequencing analysis Marine Environmental Research. 133: 57-66. PMID 29229186 DOI: 10.1016/J.Marenvres.2017.12.003  0.321
2017 Le Port A, Montgomery JC, Smith ANH, Croucher AE, McLeod IM, Lavery SD. Temperate marine protected area provides recruitment subsidies to local fisheries. Proceedings. Biological Sciences. 284. PMID 29046384 DOI: 10.1098/Rspb.2017.1300  0.406
2017 Farhadi A, Jeffs AG, Farahmand H, Rejiniemon TS, Smith G, Lavery SD. Mechanisms of peripheral phylogeographic divergence in the indo-Pacific: lessons from the spiny lobster Panulirus homarus. Bmc Evolutionary Biology. 17: 195. PMID 28821229 DOI: 10.1186/S12862-017-1050-8  0.511
2017 Gallego R, Dennis TE, Basher Z, Lavery S, Sewell MA. On the need to consider multiphasic sensitivity of marine organisms to climate change: a case study of the Antarctic acorn barnacle Journal of Biogeography. 44: 2165-2175. DOI: 10.1111/Jbi.13023  0.408
2017 Yellapu B, Jeffs A, Battaglene S, Lavery SD. Population subdivision in the tropical spiny lobster Panulirus ornatus throughout its Indo-West Pacific distribution Ices Journal of Marine Science. 74: 759-768. DOI: 10.1093/Icesjms/Fsw184  0.762
2016 Veale AJ, Williams L, Tsai P, Thakur V, Lavery S. The complete mitochondrial genomes of two chiton species (Sypharochiton pelliserpentis and Sypharochiton sinclairi) obtained using Illumina next generation sequencing. Mitochondrial Dna. Part a, Dna Mapping, Sequencing, and Analysis. 27: 537-8. PMID 24708108 DOI: 10.3109/19401736.2014.905846  0.43
2016 Farhadi A, Farahmand H, Nematollahi MA, Jeffs A, Lavery SD. A correction to “Mitochondrial DNA population structure of the scalloped lobster Panulirus homarus (Linnaeus 1758) from the West Indian Ocean” Ices Journal of Marine Science. 73: 2747-2747. DOI: 10.1093/Icesjms/Fsw082  0.383
2016 Port AL, Roycroft EJ, Thakur V, Lavery SD. Characterisation of eleven new polymorphic microsatellite markers for the coastal stingray Dasyatis brevicaudata (Dasyatidae Hutton 1875), and cross-amplification in seven dasyatid species Biochemical Systematics and Ecology. 65: 234-237. DOI: 10.1016/J.Bse.2016.02.009  0.49
2016 Wong NA, Tooman LK, Sewell MA, Lavery SD. The population genetics and origin of invasion of the invasive Asian paddle crab, Charybdis japonica (A. Milne-Edwards, 1861) (Brachyura: Portunidae) in north-eastern New Zealand Marine Biology. 163: 1-13. DOI: 10.1007/S00227-016-2906-Y  0.458
2015 O'Rorke R, Jeffs AG, Wang M, Waite AM, Beckley LE, Lavery SD. Spinning in different directions: western rock lobster larval condition varies with eddy polarity, but does their diet? Journal of Plankton Research. 37: 542-553. DOI: 10.1093/Plankt/Fbv026  0.711
2015 Gallego R, Heimeier D, Lavery S, Sewell MA. The meroplankton communities from the coastal Ross Sea: a latitudinal study Hydrobiologia. 761: 195-209. DOI: 10.1007/S10750-015-2487-7  0.392
2015 Nagel MM, Sewell MA, Lavery SD. Differences in population connectivity of a benthic marine invertebrate Evechinus chloroticus (Echinodermata: Echinoidea) across large and small spatial scales Conservation Genetics. 16: 965-978. DOI: 10.1007/S10592-015-0716-2  0.475
2015 Rabone M, Lavery SD, Little A, Clements KD. Discordance between nuclear and mitochondrial DNA analyses of population structure in closely related triplefin fishes (Forsterygion lapillum and F. capito, F. Tripterygiidae) supports speciation with gene flow Marine Biology. 162: 1611-1624. DOI: 10.1007/S00227-015-2697-6  0.457
2014 Lavery SD, Farhadi A, Farahmand H, Chan TY, Azhdehakoshpour A, Thakur V, Jeffs AG. Evolutionary divergence of geographic subspecies within the scalloped spiny lobster Panulirus homarus (Linnaeus 1758). Plos One. 9: e97247. PMID 24892781 DOI: 10.1371/Journal.Pone.0097247  0.49
2014 Robins JH, Tintinger V, Aplin KP, Hingston M, Matisoo-Smith E, Penny D, Lavery SD. Phylogenetic species identification in Rattus highlights rapid radiation and morphological similarity of New Guinean species. Plos One. 9: e98002. PMID 24865350 DOI: 10.1371/Journal.Pone.0098002  0.73
2014 O'Rorke R, Lavery SD, Wang M, Gallego R, Waite AM, Beckley LE, Thompson PA, Jeffs AG. Phyllosomata associated with large gelatinous zooplankton: hitching rides and stealing bites Ices Journal of Marine Science. 72: i124-i127. DOI: 10.1093/Icesjms/Fsu163  0.727
2014 Connell S, O'Rorke R, Jeffs A, Lavery S. DNA identification of the phyllosoma diet of Jasus edwardsii and Scyllarus sp. Z New Zealand Journal of Marine and Freshwater Research. 48: 416-429. DOI: 10.1080/00288330.2014.914042  0.756
2014 Gallego R, Lavery S, Sewell MA. The meroplankton community of the oceanic Ross Sea during late summer Antarctic Science. 26: 345-360. DOI: 10.1017/S0954102013000795  0.378
2014 O’Rorke R, Lavery SD, Wang M, Nodder SD, Jeffs AG. Determining the diet of larvae of the red rock lobster (Jasus edwardsii) using high-throughput DNA sequencing techniques Marine Biology. 161: 551-563. DOI: 10.1007/S00227-013-2357-7  0.385
2013 Port AL, Pawley MDM, Lavery SD. Speciation of two stingrays with antitropical distributions: low levels of divergence in mitochondrial DNA and morphological characters suggest recent evolution Aquatic Biology. 19: 153-165. DOI: 10.3354/Ab00518  0.471
2013 Farhadi A, Farhamand H, Nematollahi MA, Jeffs A, Lavery SD. Mitochondrial DNA population structure of the scalloped lobster Panulirus homarus (Linnaeus 1758) from the West Indian Ocean Ices Journal of Marine Science. 70: 1491-1498. DOI: 10.1093/Icesjms/Fst097  0.554
2013 O'Rorke R, Jeffs AG, Fitzgibbon Q, Chow S, Lavery S. Extracting DNA from whole organism homogenates and the risk of false positives in PCR based diet studies: A case study using spiny lobster larvae Journal of Experimental Marine Biology and Ecology. 441: 1-6. DOI: 10.1016/J.Jembe.2013.01.003  0.727
2012 O'Rorke R, Lavery S, Chow S, Takeyama H, Tsai P, Beckley LE, Thompson PA, Waite AM, Jeffs AG. Determining the diet of larvae of western rock lobster (Panulirus cygnus) using high-throughput DNA sequencing techniques. Plos One. 7: e42757. PMID 22927937 DOI: 10.1371/Journal.Pone.0042757  0.75
2012 Carroll EL, Childerhouse SJ, Christie M, Lavery S, Patenaude N, Alexander A, Constantine R, Steel D, Boren L, Scott Baker C. Paternity assignment and demographic closure in the New Zealand southern right whale. Molecular Ecology. 21: 3960-73. PMID 22726223 DOI: 10.1111/J.1365-294X.2012.05676.X  0.369
2012 Port AL, Lavery S. Population Structure and Phylogeography of the Short-Tailed Stingray, Dasyatis brevicaudata (Hutton 1875), in the Southern Hemisphere Journal of Heredity. 103: 174-185. PMID 22174443 DOI: 10.1093/Jhered/Esr131  0.531
2012 Le Port A, Lavery S, Montgomery JC. Conservation of coastal stingrays: Seasonal abundance and population structure of the short-tailed stingray Dasyatis brevicaudata at a Marine Protected Area Ices Journal of Marine Science. 69: 1427-1435. DOI: 10.1093/Icesjms/Fss120  0.428
2012 Veale A, Lavery S. The population genetic structure of the waratah anemone (Actinia tenebrosa) around New Zealand New Zealand Journal of Marine and Freshwater Research. 46: 523-536. DOI: 10.1080/00288330.2012.730053  0.476
2011 Knight S, Gordon DP, Lavery SD. A multi-locus analysis of phylogenetic relationships within cheilostome bryozoans supports multiple origins of ascophoran frontal shields. Molecular Phylogenetics and Evolution. 61: 351-62. PMID 21798360 DOI: 10.1016/J.Ympev.2011.07.005  0.462
2011 McLay CL, Hinnendael F, Lavery S, Riquelme-Bugueño RB. Morphological and Molecular Comparison of Hemigrapsus crenulatus (Milne Edwards, 1837) (Brachyura: Varunidae) from New Zealand and Chile: Was Miss Rathbun Right? Journal of Crustacean Biology. 31: 582-589. DOI: 10.1651/11-3494.1  0.486
2011 Veale AJ, Lavery SD. Phylogeography of the snakeskin chiton Sypharochiton pelliserpentis (Mollusca: Polyplacophora) around New Zealand: are seasonal near‐shore upwelling events a dynamic barrier to gene flow? Biological Journal of the Linnean Society. 104: 552-563. DOI: 10.1111/J.1095-8312.2011.01743.X  0.465
2010 Heimeier D, Lavery S, Sewell MA. Using DNA barcoding and phylogenetics to identify Antarctic invertebrate larvae: Lessons from a large scale study. Marine Genomics. 3: 165-77. PMID 21798211 DOI: 10.1016/j.margen.2010.09.004  0.369
2010 Heimeier D, Lavery S, Sewell MA. Molecular species identification of Astrotoma agassizii from planktonic embryos: further evidence for a cryptic species complex. The Journal of Heredity. 101: 775-9. PMID 20576922 DOI: 10.1093/jhered/esq074  0.41
2010 Chow S, Suzuki S, Matsunaga T, Lavery S, Jeffs A, Takeyama H. Investigation on natural diets of larval marine animals using peptide nucleic acid-directed polymerase chain reaction clamping. Marine Biotechnology (New York, N.Y.). 13: 305-13. PMID 20535520 DOI: 10.1007/s10126-010-9301-3  0.314
2010 Endo T, Hisamichi Y, Kimura O, Haraguchi K, Lavery S, Dalebout ML, Funahashi N, Baker CS. Stable isotope ratios of carbon and nitrogen and mercury concentrations in 13 toothed whale species taken from the western Pacific Ocean off Japan. Environmental Science & Technology. 44: 2675-2681. PMID 20218671 DOI: 10.1021/Es903534R  0.331
2010 Heimeier D, Lavery S, Sewell MA. Molecular species identification of astrotoma agassizii from planktonic embryos: Further evidence for a cryptic species complex Journal of Heredity. 101: 775-779. DOI: 10.1093/Jhered/Esq074  0.496
2010 Heimeier D, Lavery S, Sewell MA. Using DNA barcoding and phylogenetics to identify Antarctic invertebrate larvae: Lessons from a large scale study Marine Genomics. 3: 165-177. DOI: 10.1016/J.Margen.2010.09.004  0.468
2009 Hickey AJ, Lavery SD, Hannan DA, Baker CS, Clements KD. New Zealand triplefin fishes (family Tripterygiidae): contrasting population structure and mtDNA diversity within a marine species flock. Molecular Ecology. 18: 680-96. PMID 19215584 DOI: 10.1111/j.1365-294X.2008.04052.x  0.452
2009 Tezanos-Pinto G, Baker CS, Russell K, Martien K, Baird RW, Hutt A, Stone G, Mignucci-Giannoni AA, Caballero S, Endo T, Lavery S, Oremus M, Olavarría C, Garrigue C. A worldwide perspective on the population structure and genetic diversity of bottlenose dolphins (Tursiops truncatus) in New Zealand Journal of Heredity. 100: 11-24. PMID 18495650 DOI: 10.1093/jhered/esn039  0.402
2009 Lukoschek V, Funahashi N, Lavery S, Dalebout ML, Cipriano F, Baker CS. High proportion of protected minke whales sold on Japanese markets is due to illegal, unreported or unregulated exploitation Animal Conservation. 12: 385-395. DOI: 10.1111/J.1469-1795.2009.00302.X  0.312
2009 Nielsen JF, Lavery S, Lörz A. Synopsis of a new collection of sea spiders (Arthropoda: Pycnogonida) from the Ross Sea, Antarctica Polar Biology. 32: 1147-1155. DOI: 10.1007/S00300-009-0675-5  0.493
2006 Dethmers KE, Broderick D, Moritz C, Fitzsimmons NN, Limpus CJ, Lavery S, Whiting S, Guinea M, Prince RI, Kennett R. The genetic structure of Australasian green turtles (Chelonia mydas): exploring the geographical scale of genetic exchange. Molecular Ecology. 15: 3931-46. PMID 17054494 DOI: 10.1111/J.1365-294X.2006.03070.X  0.773
2004 Lavery S, Chan TY, Tam YK, Chu KH. Phylogenetic relationships and evolutionary history of the shrimp genus Penaeus s.l. derived from mitochondrial DNA. Molecular Phylogenetics and Evolution. 31: 39-49. PMID 15019607 DOI: 10.1016/J.Ympev.2003.07.015  0.376
2004 Hickey AJR, Lavery SD, Eyton SR, Clements KD. Verifying invasive marine fish species using molecular techniques: A model example using triplefin fishes (Family Tripterygiidae) New Zealand Journal of Marine and Freshwater Research. 38: 439-446. DOI: 10.1080/00288330.2004.9517251  0.477
2003 Ross HA, Lento GM, Dalebout ML, Goode M, Ewing G, McLaren P, Rodrigo AG, Lavery S, Baker CS. DNA surveillance: web-based molecular identification of whales, dolphins, and porpoises. The Journal of Heredity. 94: 111-4. PMID 12721222 DOI: 10.1093/JHERED/ESG027  0.354
2003 Chu KH, Li CP, Tam YK, Lavery S. Application of mitochondrial control region in population genetic studies of the shrimp Penaeus Molecular Ecology Notes. 3: 120-122. DOI: 10.1046/J.1471-8286.2003.00376.X  0.367
2003 Baker C, Dalebout ML, Lavery S, Ross HA. www.DNA-surveillance: applied molecular taxonomy for species conservation and discovery Trends in Ecology & Evolution. 18: 271-272. DOI: 10.1016/S0169-5347(03)00101-0  0.312
2002 Morrison CL, Harvey AW, Lavery S, Tieu K, Huang Y, Cunningham CW. Mitochondrial gene rearrangements confirm the parallel evolution of the crab-like form. Proceedings. Biological Sciences / the Royal Society. 269: 345-50. PMID 11886621 DOI: 10.1098/Rspb.2001.1886  0.385
1998 Chenoweth SF, Hughes JM, Keenan CP, Lavery S. When oceans meet: A teleost shows secondary intergradation at an Indian-Pacific interface Proceedings of the Royal Society B: Biological Sciences. 265: 415-420. DOI: 10.1098/Rspb.1998.0310  0.398
1998 Chenoweth SF, Hughes JM, Keenan CP, Lavery S. Concordance between dispersal and mitochondrial gene flow: Isolation by distance in a tropical teleost, Lates calcarifer (Australian barramundi) Heredity. 80: 187-197. DOI: 10.1046/J.1365-2540.1998.00292.X  0.396
1996 Lavery S, Moritz C, Fielder DR. Indo-Pacific population structure and evolutionary history of the coconut crab Birgus latro Molecular Ecology. 5: 557-570. DOI: 10.1111/J.1365-294X.1996.Tb00347.X  0.616
1996 Lavery S, Moritz C, Fielder. Genetic Patterns Suggest Exponential Population Growth in a Declining Species Molecular Biology and Evolution. 13: 1106-1113. DOI: 10.1093/Oxfordjournals.Molbev.A025672  0.569
1995 Lavery S, Moritz C, Fielder DR. Changing patterns of population structure and gene flow at different spatial scales in Birgus latro (the coconut crab) Heredity. 74: 531-541. DOI: 10.1038/Hdy.1995.75  0.43
1990 Lavery S, Staples D. Use of Allozyme Electrophoresis for identifying two species of Penaeid Prawn Postlarvae Marine and Freshwater Research. 41: 259. DOI: 10.1071/MF9900259  0.347
1989 Lavery S, Shaklee J. Population genetics of two tropical sharks, Carcharhinus tilstoni and C. sorrah, in Northern Australia Marine and Freshwater Research. 40: 541. DOI: 10.1071/MF9890541  0.362
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