Gary Jay Olsen

University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Microbiology Biology
"Gary Jay Olsen"


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Mitchell L. Sogin grad student 1983 CU Boulder (Chemistry Tree)
 (Comparative analysis of nucleotide sequence data.)


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Jonathan Badger grad student (Evolution Tree)
David E. Graham grad student 2000 UIUC
Gretchen M. Colon Gonzalez grad student 2001 UIUC
Leslie K. McNeil grad student 2002 UIUC
Enhu Li grad student 2007 UIUC
Brian Dorvel grad student 2013 UIUC
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Davis JJ, Wattam AR, Aziz RK, et al. (2019) The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities. Nucleic Acids Research
Zhang C, Phillips APR, Wipfler RL, et al. (2018) The essential genome of the crenarchaeal model Sulfolobus islandicus. Nature Communications. 9: 4908
Antonopoulos DA, Assaf R, Aziz RK, et al. (2017) PATRIC as a unique resource for studying antimicrobial resistance. Briefings in Bioinformatics
Wattam AR, Davis JJ, Assaf R, et al. (2016) Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center. Nucleic Acids Research
Davis JJ, Gerdes S, Olsen GJ, et al. (2016) PATtyFams: Protein Families for the Microbial Genomes in the PATRIC Database. Frontiers in Microbiology. 7: 118
Wetzel ME, Olsen GJ, Chakravartty V, et al. (2015) The repABC Plasmids with Quorum-Regulated Transfer Systems in Members of the Rhizobiales Divide into Two Structurally and Separately Evolving Groups. Genome Biology and Evolution. 7: 3337-57
Matthews TD, Schmieder R, Silva GG, et al. (2015) Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum. Plos One. 10: e0126883
Brettin T, Davis JJ, Disz T, et al. (2015) RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes. Scientific Reports. 5: 8365
Davis JJ, Olsen GJ, Overbeek R, et al. (2014) In search of genome annotation consistency: solid gene clusters and how to use them. 3 Biotech. 4: 331-335
Wetzel ME, Kim KS, Miller M, et al. (2014) Quorum-dependent mannopine-inducible conjugative transfer of an Agrobacterium opine-catabolic plasmid. Journal of Bacteriology. 196: 1031-44
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