Jef D. Boeke, PhD Dsc

1985-2013 Molecular Biology & Genetics Johns Hopkins University, Baltimore, MD 
 2014- Institute for Systems Genetics NYU Langone Health  
Molecular Biology, Genetics, Microbiology Biology
"Jef Boeke"


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Norton D. Zinder grad student 1982 Rockefeller (Chemistry Tree)
Peter Model grad student 1977-1982 Rockefeller (Chemistry Tree)
 (coadvised by Norton Zinder and Peter Model)
Gerald R. Fink post-doc (Evolution Tree)


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Allen T Yu research assistant 2007-2008 Johns Hopkins (Cell Biology Tree)
James E DiCarlo research assistant 2006-2010 Johns Hopkins (Chemistry Tree)
Kalpana Gupta grad student 2000 Johns Hopkins
Oxana K. Pickeral grad student 2000 Johns Hopkins
Gregory J. Cost grad student 2001 Johns Hopkins
Eric C. Bolton grad student 2003 Johns Hopkins
Siew L. Ooi grad student 2003 Johns Hopkins
Nurjana Bachman grad student 2004 Johns Hopkins
Jeffrey S. Han grad student 2005 Johns Hopkins
Ivana Celic grad student 2007 Johns Hopkins
Wen-Chih W. Cheng grad student 2007 Johns Hopkins
Edel Hyland grad student 2003-2008 NYU School of Medicine (Evolution Tree)
Yu-yi Lin grad student 2009 Johns Hopkins
Anne Norris grad student 2009 Johns Hopkins
Brad P. Barnett grad student 2010 Johns Hopkins
Jessica S. Dymond grad student 2011 Johns Hopkins
Veena P. Gnanakkan grad student 2012 Johns Hopkins
Giovanni Stracquadanio post-doc 2010-2014 Johns Hopkins (Computational Biology Tree)
Paolo Mita post-doc 2012-2018 Johns Hopkins University School of Medicine; NYU Langone Medical center
BETA: Related publications


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Briggs EM, Mita P, Sun X, et al. (2021) Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas9. Mobile Dna. 12: 21
Gorbunova V, Seluanov A, Mita P, et al. (2021) The role of retrotransposable elements in ageing and age-associated diseases. Nature. 596: 43-53
Woronik A, Shaffer HW, Kiontke K, et al. (2021) EUAdb: A resource for COVID-19 test development and comparison. Plos One. 16: e0255417
Penev A, Bazley A, Shen M, et al. (2021) Alternative splicing is a developmental switch for hTERT expression. Molecular Cell
Mitchell LA, McCulloch LH, Pinglay S, et al. (2021) De novo assembly and delivery to mouse cells of a 101 kb functional human gene. Genetics
Brosh R, Laurent JM, Ordoñez R, et al. (2021) A versatile platform for locus-scale genome rewriting and verification. Proceedings of the National Academy of Sciences of the United States of America. 118
Li D, Sun X, Yu F, et al. (2021) Application of counter-selectable marker PIGA in engineering designer deletion cell lines and characterization of CRISPR deletion efficiency. Nucleic Acids Research
Briggs EM, McKerrow W, Mita P, et al. (2021) RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs. Mobile Dna. 12: 5
Valencia-Sánchez MI, De Ioannes P, Wang M, et al. (2021) Regulation of the Dot1 histone H3K79 methyltransferase by histone H4K16 acetylation. Science (New York, N.Y.). 371
Goldberg GW, Spencer JM, Giganti DO, et al. (2021) Engineered dual selection for directed evolution of SpCas9 PAM specificity. Nature Communications. 12: 349
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