Buck S. Samuel, Ph.D.

2015- Center for Metagenomics and Microbiome Research Baylor College of Medicine, Houston, TX 
Microbiome, C. elegans, Systems Biology, Genetics and Genomics, Host-Microbe Interactions
"Buck Samuel"


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Jeffrey Gordon grad student 2007 Washington University
 (Genomic and metabolic foundations of archaeal -bacterial mutualism in the gut.)
Gary Ruvkun post-doc 2008-2014 MGH & Harvard Medical School (Neurotree)


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Mario Loeza Cabrera research assistant 2017- Baylor
Christopher Ayoub research assistant 2015-2017 Baylor
Jessica Weckhorst grad student 2016- Baylor
Fan Zhang post-doc 2015- Baylor
Adrien Assie post-doc 2018- Baylor
Anastasia Khodakova post-doc 2018- Baylor


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Fred M. Ausubel collaborator (Chemistry Tree)
Gretchen E. Diehl collaborator (Neurotree)
Katherine E. Gregory collaborator (Nursing Tree)
Cara Helene Haney collaborator (Plant Biology Tree)
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Zhang F, Weckhorst JL, Assié A, et al. (2021) Natural genetic variation drives microbiome selection in the Caenorhabditis elegans gut. Current Biology : Cb
Khodakova AS, Vilchis DV, Blackburn D, et al. (2021) Population scale nucleic acid delivery to Caenorhabditis elegans via electroporation. G3 (Bethesda, Md.)
Dirksen P, Assié A, Zimmermann J, et al. (2020) CeMbio - The Microbiome Resource. G3 (Bethesda, Md.)
Zhang F, Weckhorst JL, Assié A, et al. (2020) High-Throughput Assessment of Changes in the Caenorhabditis elegans Gut Microbiome. Methods in Molecular Biology (Clifton, N.J.). 2144: 131-144
Assié A, Samuel BS. (2019) The Devil Is in the Microbial Genetic Details. Molecular Cell. 74: 1108-1109
Bodine TJ, Evangelista MA, Chang HT, et al. (2017) Escherichia coli DNA ligase B may mitigate damage from oxidative stress. Plos One. 12: e0180800
Zhang F, Berg M, Dierking K, et al. (2017) Caenorhabditis elegans as a Model for Microbiome Research. Frontiers in Microbiology. 8: 485
Gregory KE, Samuel BS, Houghteling P, et al. (2016) Influence of maternal breast milk ingestion on acquisition of the intestinal microbiome in preterm infants. Microbiome. 4: 68
Samuel BS, Rowedder H, Braendle C, et al. (2016) Caenorhabditis elegans responses to bacteria from its natural habitats. Proceedings of the National Academy of Sciences of the United States of America
Haney CH, Samuel BS, Bush J, et al. (2015) Associations with rhizosphere bacteria can confer an adaptive advantage to plants. Nature Plants. 1
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