Alan Pacheco
Affiliations: | Bioinformatics Program | Boston University, Boston, MA, United States |
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"Alan Pacheco"
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| Schäfer M, Pacheco AR, Künzler R, et al. (2023) Metabolic interaction models recapitulate leaf microbiota ecology. Science (New York, N.Y.). 381: eadf5121 |
| Pacheco AR, Vorholt JA. (2023) Resolving metabolic interaction mechanisms in plant microbiomes. Current Opinion in Microbiology. 74: 102317 |
| Pacheco AR, Pauvert C, Kishore D, et al. (2022) Toward FAIR Representations of Microbial Interactions. Msystems. e0065922 |
| Ankrah NYD, Bernstein DB, Biggs M, et al. (2021) Enhancing Microbiome Research through Genome-Scale Metabolic Modeling. Msystems. 6: e0059921 |
| Dukovski I, Bajić D, Chacón JM, et al. (2021) A metabolic modeling platform for the computation of microbial ecosystems in time and space (COMETS). Nature Protocols |
| Moyer D, Pacheco AR, Bernstein DB, et al. (2021) Stoichiometric Modeling of Artificial String Chemistries Reveals Constraints on Metabolic Network Structure. Journal of Molecular Evolution |
| Pacheco AR, Segrè D. (2021) An evolutionary algorithm for designing microbial communities via environmental modification. Journal of the Royal Society, Interface. 18: 20210348 |
| Pacheco AR, Osborne ML, Segrè D. (2021) Non-additive microbial community responses to environmental complexity. Nature Communications. 12: 2365 |
| Pacheco AR, Segrè D. (2019) A multidimensional perspective on microbial interactions. Fems Microbiology Letters |
| Pacheco AR, Moel M, Segrè D. (2019) Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems. Nature Communications. 10: 103 |