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Vaishali Katju, Ph.D. - Publications

Affiliations: 
Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Evolution
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Sequeira AN, O'Keefe IP, Katju V, Bergthorsson U. Friend turned foe: selfish behavior of a spontaneously arising mitochondrial deletion in an experimentally evolved C. elegans population. G3 (Bethesda, Md.). PMID 38261394 DOI: 10.1093/g3journal/jkae018  0.309
2022 Daigle AT, Deiss TC, Melde RH, Bergthorsson U, Katju V. Bergerac Strains of C. elegans Revisited: Expansion of Tc1 elements Impose a Significant Genomic and Fitness Cost. G3 (Bethesda, Md.). PMID 35977391 DOI: 10.1093/g3journal/jkac214  0.352
2021 Katju V, Konrad A, Deiss TC, Bergthorsson U. Mutation rate and spectrum in obligately outcrossing Caenorhabditis elegans mutation accumulation lines subjected to RNAi-induced knockdown of the mismatch repair gene msh-2. G3 (Bethesda, Md.). PMID 34849777 DOI: 10.1093/g3journal/jkab364  0.594
2020 Bergthorsson U, Sheeba CJ, Konrad A, Belicard T, Beltran T, Katju V, Sarkies P. Long-term experimental evolution reveals purifying selection on piRNA-mediated control of transposable element expression. Bmc Biology. 18: 162. PMID 33158445 DOI: 10.1186/s12915-020-00897-y  0.553
2020 Beltran T, Shahrezaei V, Katju V, Sarkies P. Epimutations driven by small RNAs arise frequently but most have limited duration in Caenorhabditis elegans. Nature Ecology & Evolution. PMID 32868918 DOI: 10.1038/S41559-020-01293-Z  0.394
2020 Dubie JJ, Caraway AR, Stout MM, Katju V, Bergthorsson U. The conflict within: origin, proliferation and persistence of a spontaneously arising selfish mitochondrial genome. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190174. PMID 31787044 DOI: 10.1098/Rstb.2019.0174  0.409
2019 Konrad A, Brady MJ, Bergthorsson U, Katju V. Mutational Landscape of Spontaneous Base Substitutions and Small Indels in Experimental Caenorhabditis elegans Populations of Differing Size. Genetics. 212: 837-854. PMID 33954401 DOI: 10.1534/genetics.119.302054  0.59
2019 Konrad A, Brady MJ, Bergthorsson U, Katju V. Mutational Landscape of Spontaneous Base Substitutions and Small Indels in Experimental Caenorhabditis elegans Populations of Differing Size. Genetics. 212: 837-854. PMID 33954383 DOI: 10.1534/genetics.119.302054  0.59
2019 Konrad A, Brady MJ, Bergthorsson U, Katju V. Mutational Landscape of Spontaneous Base Substitutions and Small Indels in Experimental Populations of Differing Size. Genetics. PMID 31110155 DOI: 10.1534/Genetics.119.302054  0.607
2018 Katju V, Bergthorsson U. Old trade, new tricks: insights into the spontaneous mutation process from the partnering of classical mutation accumulation experiments with high-throughput genomic approaches. Genome Biology and Evolution. PMID 30476040 DOI: 10.1093/Gbe/Evy252  0.408
2018 Konrad A, Flibotte S, Taylor J, Waterston RH, Moerman DG, Bergthorsson U, Katju V. Mutational and transcriptional landscape of spontaneous gene duplications and deletions in . Proceedings of the National Academy of Sciences of the United States of America. PMID 29941601 DOI: 10.1073/Pnas.1801930115  0.646
2018 Katju V, Packard LB, Keightley PD. Fitness decline under osmotic stress in Caenorhabditis elegans populations subjected to spontaneous mutation accumulation at varying population sizes. Evolution; International Journal of Organic Evolution. PMID 29513384 DOI: 10.1111/Evo.13463  0.341
2017 Konrad A, Thompson O, Waterston RH, Moerman DG, Keightley PD, Bergthorsson U, Katju V. Article: Discoveries. Molecular Biology and Evolution. PMID 28087770 DOI: 10.1093/Molbev/Msx051  0.629
2015 Farslow JC, Lipinski KJ, Packard LB, Edgley ML, Taylor J, Flibotte S, Moerman DG, Katju V, Bergthorsson U. Rapid Increase in frequency of gene copy-number variants during experimental evolution in Caenorhabditis elegans. Bmc Genomics. 16: 1044. PMID 26645535 DOI: 10.1186/S12864-015-2253-2  0.442
2015 Bu L, Katju V. Early evolutionary history and genomic features of gene duplicates in the human genome. Bmc Genomics. 16: 621. PMID 26290067 DOI: 10.1186/S12864-015-1827-3  0.474
2015 Katju V, Packard LB, Bu L, Keightley PD, Bergthorsson U. Fitness decline in spontaneous mutation accumulation lines of Caenorhabditis elegans with varying effective population sizes. Evolution; International Journal of Organic Evolution. 69: 104-16. PMID 25338758 DOI: 10.1111/Evo.12554  0.366
2013 Katju V, Bergthorsson U. Copy-number changes in evolution: rates, fitness effects and adaptive significance. Frontiers in Genetics. 4: 273. PMID 24368910 DOI: 10.3389/Fgene.2013.00273  0.502
2013 Katju V. To the beat of a different drum: determinants implicated in the asymmetric sequence divergence of Caenorhabditis elegans paralogs. Bmc Evolutionary Biology. 13: 73. PMID 23530733 DOI: 10.1186/1471-2148-13-73  0.44
2012 Katju V. In with the old, in with the new: the promiscuity of the duplication process engenders diverse pathways for novel gene creation. International Journal of Evolutionary Biology. 2012: 341932. PMID 23008799 DOI: 10.1155/2012/341932  0.433
2011 Bu L, Bergthorsson U, Katju V. Local synteny and codon usage contribute to asymmetric sequence divergence of Saccharomyces cerevisiae gene duplicates. Bmc Evolutionary Biology. 11: 279. PMID 21955875 DOI: 10.1186/1471-2148-11-279  0.452
2011 Lipinski KJ, Farslow JC, Fitzpatrick KA, Lynch M, Katju V, Bergthorsson U. High spontaneous rate of gene duplication in Caenorhabditis elegans. Current Biology : Cb. 21: 306-10. PMID 21295484 DOI: 10.1016/J.Cub.2011.01.026  0.642
2010 Katju V, Bergthorsson U. Genomic and population-level effects of gene conversion in caenorhabditis paralogs. Genes. 1: 452-68. PMID 24710096 DOI: 10.3390/Genes1030452  0.463
2010 Rane HS, Smith JM, Bergthorsson U, Katju V. Gene conversion and DNA sequence polymorphism in the sex-determination gene fog-2 and its paralog ftr-1 in Caenorhabditis elegans. Molecular Biology and Evolution. 27: 1561-9. PMID 20133352 DOI: 10.1093/Molbev/Msq039  0.439
2009 Katju V, Farslow JC, Bergthorsson U. Variation in gene duplicates with low synonymous divergence in Saccharomyces cerevisiae relative to Caenorhabditis elegans. Genome Biology. 10: R75. PMID 19594930 DOI: 10.1186/Gb-2009-10-7-R75  0.501
2008 Katju V, LaBeau EM, Lipinski KJ, Bergthorsson U. Sex change by gene conversion in a Caenorhabditis elegans fog-2 mutant. Genetics. 180: 669-72. PMID 18757925 DOI: 10.1534/Genetics.108.090035  0.41
2007 Kamping A, Katju V, Beukeboom LW, Werren JH. Inheritance of gynandromorphism in the parasitic wasp Nasonia vitripennis. Genetics. 175: 1321-33. PMID 17179086 DOI: 10.1534/Genetics.106.067082  0.314
2006 Katju V, Lynch M. On the formation of novel genes by duplication in the Caenorhabditis elegans genome. Molecular Biology and Evolution. 23: 1056-67. PMID 16500928 DOI: 10.1093/Molbev/Msj114  0.6
2004 Lynch M, Katju V. The altered evolutionary trajectories of gene duplicates. Trends in Genetics : Tig. 20: 544-9. PMID 15475113 DOI: 10.1016/J.Tig.2004.09.001  0.579
2003 Katju V, Lynch M. The structure and early evolution of recently arisen gene duplicates in the Caenorhabditis elegans genome. Genetics. 165: 1793-803. PMID 14704166  0.556
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