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Daniel A. Henk, Ph.D. - Publications

Affiliations: 
Duke University, Durham, NC 
Area:
Fungal evolution and phylogenetics
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25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Abeln F, Fan J, Budarin VL, Briers H, Parsons S, Allen MJ, Henk DA, Clark J, Chuck CJ. Lipid production through the single-step microwave hydrolysis of macroalgae using the oleaginous yeast Metschnikowia pulcherrima Algal Research. 38: 101411. DOI: 10.1016/J.Algal.2019.101411  0.305
2019 Hicks RH, Chuck CJ, Scott RJ, Leak DJ, Henk DA. Comparison of Nile Red and Cell Size Analysis for High‐Throughput Lipid Estimation Within Oleaginous Yeast European Journal of Lipid Science and Technology. 121: 1800355. DOI: 10.1002/Ejlt.201800355  0.311
2016 Farrer RA, Voelz K, Henk DA, Johnston SA, Fisher MC, May RC, Cuomo CA. Microevolutionary traits and comparative population genomics of the emerging pathogenic fungus Cryptococcus gattii. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 28080992 DOI: 10.1098/Rstb.2016.0021  0.416
2016 Henk DA, Vilgalys R. Genetic Structure within Septobasidium Colonies Suggests Outcrossing and Frequent Non Self-Fusion Fungal Genomics & Biology. 6. DOI: 10.4172/2165-8056.1000143  0.427
2013 Browne AG, Fisher MC, Henk DA. Species-specific PCR to describe local-scale distributions of four cryptic species in the Penicillium chrysogenum complex. Fungal Ecology. 6: 419-429. PMID 24179477 DOI: 10.1016/J.Funeco.2013.04.003  0.42
2013 Voelz K, Ma H, Phadke S, Byrnes EJ, Zhu P, Mueller O, Farrer RA, Henk DA, Lewit Y, Hsueh YP, Fisher MC, Idnurm A, Heitman J, May RC. Transmission of Hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen cryptococcus gattii. Plos Genetics. 9: e1003771. PMID 24039607 DOI: 10.1371/Journal.Pgen.1003771  0.396
2013 Farrer RA, Henk DA, Garner TW, Balloux F, Woodhams DC, Fisher MC. Chromosomal copy number variation, selection and uneven rates of recombination reveal cryptic genome diversity linked to pathogenicity. Plos Genetics. 9: e1003703. PMID 23966879 DOI: 10.1371/Journal.Pgen.1003703  0.442
2013 Farrer RA, Henk DA, MacLean D, Studholme DJ, Fisher MC. Using false discovery rates to benchmark SNP-callers in next-generation sequencing projects. Scientific Reports. 3: 1512. PMID 23518929 DOI: 10.1038/Srep01512  0.324
2012 Henk DA, Shahar-Golan R, Devi KR, Boyce KJ, Zhan N, Fedorova ND, Nierman WC, Hsueh PR, Yuen KY, Sieu TP, Kinh NV, Wertheim H, Baker SG, Day JN, Vanittanakom N, et al. Clonality despite sex: the evolution of host-associated sexual neighborhoods in the pathogenic fungus Penicillium marneffei. Plos Pathogens. 8: e1002851. PMID 23055919 DOI: 10.1371/Journal.Ppat.1002851  0.383
2012 Fisher MC, Henk DA, Briggs CJ, Brownstein JS, Madoff LC, McCraw SL, Gurr SJ. Emerging fungal threats to animal, plant and ecosystem health. Nature. 484: 186-94. PMID 22498624 DOI: 10.1038/Nature10947  0.343
2012 Fisher MC, Henk DA. Sex, drugs and recombination: the wild life of Aspergillus. Molecular Ecology. 21: 1305-6. PMID 22393930 DOI: 10.1111/J.1365-294X.2012.05506.X  0.333
2012 Henk DA, Fisher MC. The gut fungus Basidiobolus ranarum has a large genome and different copy numbers of putatively functionally redundant elongation factor genes. Plos One. 7: e31268. PMID 22363602 DOI: 10.1371/Journal.Pone.0031268  0.311
2011 Farrer RA, Weinert LA, Bielby J, Garner TW, Balloux F, Clare F, Bosch J, Cunningham AA, Weldon C, du Preez LH, Anderson L, Pond SL, Shahar-Golan R, Henk DA, Fisher MC. Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage. Proceedings of the National Academy of Sciences of the United States of America. 108: 18732-6. PMID 22065772 DOI: 10.1073/Pnas.1111915108  0.415
2011 Henk DA, Eagle CE, Brown K, Van Den Berg MA, Dyer PS, Peterson SW, Fisher MC. Speciation despite globally overlapping distributions in Penicillium chrysogenum: the population genetics of Alexander Fleming's lucky fungus. Molecular Ecology. 20: 4288-301. PMID 21951491 DOI: 10.1111/J.1365-294X.2011.05244.X  0.468
2011 Henk DA, Fisher MC. Genetic diversity, recombination, and divergence in animal associated Penicillium dipodomyis. Plos One. 6: e22883. PMID 21850241 DOI: 10.1371/Journal.Pone.0022883  0.433
2011 Meece JK, Anderson JL, Fisher MC, Henk DA, Sloss BL, Reed KD. Population genetic structure of clinical and environmental isolates of Blastomyces dermatitidis, based on 27 polymorphic microsatellite markers. Applied and Environmental Microbiology. 77: 5123-31. PMID 21705544 DOI: 10.1128/Aem.00258-11  0.392
2011 Simwami SP, Khayhan K, Henk DA, Aanensen DM, Boekhout T, Hagen F, Brouwer AE, Harrison TS, Donnelly CA, Fisher MC. Low diversity Cryptococcus neoformans variety grubii multilocus sequence types from Thailand are consistent with an ancestral African origin. Plos Pathogens. 7: e1001343. PMID 21573144 DOI: 10.1371/Journal.Ppat.1001343  0.427
2011 Henk DA, Farr DF, Aime MC. Mycodiplosis (Diptera) infestation of rust fungi is frequent, wide spread and possibly host specific Fungal Ecology. 4: 284-289. DOI: 10.1016/J.Funeco.2011.03.006  0.45
2010 Walker SF, Bosch J, Gomez V, Garner TW, Cunningham AA, Schmeller DS, Ninyerola M, Henk DA, Ginestet C, Arthur CP, Fisher MC. Factors driving pathogenicity vs. prevalence of amphibian panzootic chytridiomycosis in Iberia. Ecology Letters. 13: 372-82. PMID 20132274 DOI: 10.1111/J.1461-0248.2009.01434.X  0.338
2007 Henk DA, Vilgalys R. Molecular phylogeny suggests a single origin of insect symbiosis in the Pucciniomycetes with support for some relationships within the genus Septobasidium. American Journal of Botany. 94: 1515-26. PMID 21636518 DOI: 10.3732/Ajb.94.9.1515  0.577
2007 Arnold AE, Henk DA, Eells RL, Lutzoni F, Vilgalys R. Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR. Mycologia. 99: 185-206. PMID 17682771 DOI: 10.3852/Mycologia.99.2.185  0.604
2006 Aime MC, Matheny PB, Henk DA, Frieders EM, Nilsson RH, Piepenbring M, McLaughlin DJ, Szabo LJ, Begerow D, Sampaio JP, Bauer R, Weiss M, Oberwinkler F, Hibbett D. An overview of the higher level classification of Pucciniomycotina based on combined analyses of nuclear large and small subunit rDNA sequences. Mycologia. 98: 896-905. PMID 17486966 DOI: 10.3852/Mycologia.98.6.896  0.576
2005 Henk DA. New species of Septobasidium from southern Costa Rica and the southeastern United States. Mycologia. 97: 908-13. PMID 16457360 DOI: 10.3852/Mycologia.97.4.908  0.384
2003 Blackwell M, Henk DA, Jones KG. Extreme morphological divergence: phylogenetic position of a termite ectoparasite. Mycologia. 95: 987-92. PMID 21149006 DOI: 10.1080/15572536.2004.11833013  0.4
2003 Henk DA, Weir A, Blackwell M. Laboulbeniopsis termitarius, an ectoparasite of termites newly recognized as a member of the Laboulbeniomycetes. Mycologia. 95: 561-4. PMID 21148964 DOI: 10.1080/15572536.2004.11833059  0.388
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