Year |
Citation |
Score |
2023 |
Chapman JR, Paukner M, Leser M, Teng KW, Koide S, Holder M, Armache KJ, Becker C, Ueberheide B, Brenowitz M. Systematic Fe(II)-EDTA Method of Dose-Dependent Hydroxyl Radical Generation for Protein Oxidative Footprinting. Analytical Chemistry. PMID 38049117 DOI: 10.1021/acs.analchem.3c02319 |
0.505 |
|
2021 |
Zheng X, Marsman G, Lacey KA, Chapman JR, Goosmann C, Ueberheide BM, Torres VJ. The cell envelope of Staphylococcus aureus selectively controls the sorting of virulence factors. Nature Communications. 12: 6193. PMID 34702812 DOI: 10.1038/s41467-021-26517-z |
0.457 |
|
2019 |
Lee CH, Yu JR, Granat J, Saldaña-Meyer R, Andrade J, LeRoy G, Jin Y, Lund P, Stafford JM, Garcia BA, Ueberheide B, Reinberg D. Automethylation of PRC2 promotes H3K27 methylation and is impaired in H3K27M pediatric glioma. Genes & Development. PMID 31488577 DOI: 10.1101/Gad.328773.119 |
0.48 |
|
2018 |
Brenowitz M, Chapman JR, Ueberheide B, Khine M, Pegan J, Law M, Makkaoui ME, Leser M. Chemical Generation of Hydroxyl Radical for Oxidative 'Footprinting'. Protein and Peptide Letters. PMID 30543161 DOI: 10.2174/0929866526666181212164812 |
0.406 |
|
2018 |
Stafford JM, Lee CH, Voigt P, Descostes N, Saldaña-Meyer R, Yu JR, Leroy G, Oksuz O, Chapman JR, Suarez F, Modrek AS, Bayin NS, Placantonakis DG, Karajannis MA, Snuderl M, ... Ueberheide B, et al. Multiple modes of PRC2 inhibition elicit global chromatin alterations in H3K27M pediatric glioma. Science Advances. 4: eaau5935. PMID 30402543 DOI: 10.1126/Sciadv.Aau5935 |
0.511 |
|
2018 |
Diamond JM, Vanpouille-Box C, Spada S, Rudqvist NP, Chapman J, Ueberheide B, Pilones KA, Sarfraz Y, Formenti SC, Demaria S. Exosomes shuttle TREX1-sensitive IFN-stimulatory dsDNA from irradiated cancer cells to dendritic cells. Cancer Immunology Research. PMID 29907693 DOI: 10.1158/2326-6066.Cir-17-0581 |
0.437 |
|
2018 |
Harper L, Balasubramanian D, Ohneck EA, Sause WE, Chapman J, Mejia-Sosa B, Lhakhang T, Heguy A, Tsirigos A, Ueberheide B, Boyd JM, Lun DS, Torres VJ. Staphylococcus aureus Responds to the Central Metabolite Pyruvate To Regulate Virulence. Mbio. 9. PMID 29362239 DOI: 10.1128/Mbio.02272-17 |
0.444 |
|
2017 |
Chen Z, Notti RQ, Ueberheide BM, Ruthenburg AJ. Quantitative and structural assessment of histone methyllysine analog engagement by cognate binding proteins reveals affinity decrements relative to native counterparts. Biochemistry. PMID 29111671 DOI: 10.1021/Acs.Biochem.7B00926 |
0.347 |
|
2017 |
Moretti J, Roy S, Bozec D, Martinez J, Chapman JR, Ueberheide B, Lamming DW, Chen ZJ, Horng T, Yeretssian G, Green DR, Blander JM. STING Senses Microbial Viability to Orchestrate Stress-Mediated Autophagy of the Endoplasmic Reticulum. Cell. PMID 29056340 DOI: 10.1016/J.Cell.2017.09.034 |
0.429 |
|
2017 |
Coleman KE, Békés M, Chapman JR, Crist SB, Jones MJ, Ueberheide BM, Huang TT. SENP8 limits aberrant neddylation of NEDD8 pathway components to promote cullin-RING ubiquitin ligase function. Elife. 6. PMID 28475037 DOI: 10.7554/Elife.24325 |
0.468 |
|
2017 |
Chapman JR, Katsara O, Ruoff R, Morgenstern D, Nayak S, Basilico C, Ueberheide B, Kolupaeva V. Phosphoproteomics of FGF1 signaling in chondrocytes: Identifying the signature of inhibitory response. Molecular & Cellular Proteomics : McP. PMID 28298517 DOI: 10.1074/Mcp.M116.064980 |
0.477 |
|
2017 |
Chapman JR, Balasubramanian D, Tam K, Askenazi M, Copin R, Shopsin B, Torres VJ, Ueberheide B. Using quantitative mass spectrometry to better understand the influence of genetics and nutritional perturbations on the virulence potential of Staphylococcus aureus. Molecular & Cellular Proteomics : McP. PMID 28196877 DOI: 10.1074/Mcp.O116.065581 |
0.507 |
|
2016 |
Diamond J, Chapman J, Ueberheide B, Formenti S, Demaria S. Tumor-Derived Exosomes as Modulators of Radiation-Induced Anti-Tumor Immunity. International Journal of Radiation Oncology, Biology, Physics. 96: S53. PMID 27675954 DOI: 10.1016/J.Ijrobp.2016.06.138 |
0.402 |
|
2016 |
Balasubramanian D, Ohneck EA, Chapman J, Weiss A, Kim MK, Reyes-Robles T, Zhong J, Shaw LN, Lun DS, Ueberheide B, Shopsin B, Torres VJ. Staphylococcus aureus Coordinates Leukocidin Expression and Pathogenesis by Sensing Metabolic Fluxes via RpiRc. Mbio. 7. PMID 27329753 DOI: 10.1128/Mbio.00818-16 |
0.469 |
|
2016 |
Tufariello JM, Chapman JR, Kerantzas CA, Wong KW, Vilchèze C, Jones CM, Cole LE, Tinaztepe E, Thompson V, Fenyö D, Niederweis M, Ueberheide B, Philips JA, Jacobs WR. Separable roles for Mycobacterium tuberculosis ESX-3 effectors in iron acquisition and virulence. Proceedings of the National Academy of Sciences of the United States of America. PMID 26729876 DOI: 10.1073/Pnas.1523321113 |
0.435 |
|
2015 |
Campos EI, Smits AH, Kang YH, Landry S, Escobar TM, Nayak S, Ueberheide BM, Durocher D, Vermeulen M, Hurwitz J, Reinberg D. Analysis of the Histone H3.1 Interactome: A Suitable Chaperone for the Right Event. Molecular Cell. PMID 26527279 DOI: 10.1016/J.Molcel.2015.08.005 |
0.312 |
|
2015 |
Diamond JM, Chapman JR, Ueberheide B, Formenti S, Demaria S. Ionizing radiation modifies immune-related molecular profiles of tumor-derived exosomes Journal For Immunotherapy of Cancer. 3. DOI: 10.1186/2051-1426-3-S2-P382 |
0.441 |
|
2013 |
Békés M, Okamoto K, Crist SB, Jones MJ, Chapman JR, Brasher BB, Melandri FD, Ueberheide BM, Denchi EL, Huang TT. DUB-resistant ubiquitin to survey ubiquitination switches in mammalian cells. Cell Reports. 5: 826-38. PMID 24210823 DOI: 10.1016/J.Celrep.2013.10.008 |
0.471 |
|
2012 |
Cotto-Rios XM, Békés M, Chapman J, Ueberheide B, Huang TT. Deubiquitinases as a signaling target of oxidative stress. Cell Reports. 2: 1475-84. PMID 23219552 DOI: 10.1016/J.Celrep.2012.11.011 |
0.459 |
|
2012 |
Bozzacco L, Yu H, Dengjel J, Trumpfheller C, Zebroski HA, Zhang N, Küttner V, Ueberheide BM, Deng H, Chait BT, Steinman RM, Mojsov S, Fenyö D. Strategy for identifying dendritic cell-processed CD4+ T cell epitopes from the HIV gag p24 protein. Plos One. 7: e41897. PMID 22860026 DOI: 10.1371/Journal.Pone.0041897 |
0.342 |
|
2011 |
Ruthenburg AJ, Li H, Milne TA, Dewell S, McGinty RK, Yuen M, Ueberheide B, Dou Y, Muir TW, Patel DJ, Allis CD. Recognition of a mononucleosomal histone modification pattern by BPTF via multivalent interactions. Cell. 145: 692-706. PMID 21596426 DOI: 10.1016/J.Cell.2011.03.053 |
0.43 |
|
2010 |
Garcia BA, Cooper HJ, Dorrestein PC, Tang K, Ueberheide BM. Proteomics. Journal of Biomedicine & Biotechnology. 2010: 453045. PMID 21541239 DOI: 10.1155/2010/453045 |
0.422 |
|
2010 |
Zhang G, Ueberheide BM, Waldemarson S, Myung S, Molloy K, Eriksson J, Chait BT, Neubert TA, Fenyö D. Protein quantitation using mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 673: 211-22. PMID 20835801 DOI: 10.1007/978-1-60761-842-3_13 |
0.434 |
|
2009 |
Basu A, Rose KL, Zhang J, Beavis RC, Ueberheide B, Garcia BA, Chait B, Zhao Y, Hunt DF, Segal E, Allis CD, Hake SB. Proteome-wide prediction of acetylation substrates. Proceedings of the National Academy of Sciences of the United States of America. 106: 13785-90. PMID 19666589 DOI: 10.1073/Pnas.0906801106 |
0.605 |
|
2009 |
Ueberheide BM, Fenyö D, Alewood PF, Chait BT. Rapid sensitive analysis of cysteine rich peptide venom components. Proceedings of the National Academy of Sciences of the United States of America. 106: 6910-5. PMID 19380747 DOI: 10.1073/Pnas.0900745106 |
0.409 |
|
2007 |
Garcia BA, Mollah S, Ueberheide BM, Busby SA, Muratore TL, Shabanowitz J, Hunt DF. Chemical derivatization of histones for facilitated analysis by mass spectrometry. Nature Protocols. 2: 933-8. PMID 17446892 DOI: 10.1038/Nprot.2007.106 |
0.729 |
|
2007 |
Taverna SD, Ueberheide BM, Liu Y, Tackett AJ, Diaz RL, Shabanowitz J, Chait BT, Hunt DF, Allis CD. Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini. Proceedings of the National Academy of Sciences of the United States of America. 104: 2086-91. PMID 17284592 DOI: 10.1073/Pnas.0610993104 |
0.585 |
|
2007 |
Ueberheide BM, Mollah S. Deciphering the histone code using mass spectrometry International Journal of Mass Spectrometry. 259: 46-56. DOI: 10.1016/J.Ijms.2006.09.001 |
0.685 |
|
2006 |
Mikesh LM, Ueberheide B, Chi A, Coon JJ, Syka JE, Shabanowitz J, Hunt DF. The utility of ETD mass spectrometry in proteomic analysis. Biochimica Et Biophysica Acta. 1764: 1811-22. PMID 17118725 DOI: 10.1016/J.Bbapap.2006.10.003 |
0.746 |
|
2006 |
Li J, Riehle MM, Zhang Y, Xu J, Oduol F, Gomez SM, Eiglmeier K, Ueberheide BM, Shabanowitz J, Hunt DF, Ribeiro JM, Vernick KD. Anopheles gambiae genome reannotation through synthesis of ab initio and comparative gene prediction algorithms. Genome Biology. 7: R24. PMID 16569258 DOI: 10.1186/Gb-2006-7-3-R24 |
0.473 |
|
2005 |
Fischle W, Tseng BS, Dormann HL, Ueberheide BM, Garcia BA, Shabanowitz J, Hunt DF, Funabiki H, Allis CD. Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation. Nature. 438: 1116-22. PMID 16222246 DOI: 10.1038/Nature04219 |
0.617 |
|
2005 |
Coon JJ, Ueberheide B, Syka JE, Dryhurst DD, Ausio J, Shabanowitz J, Hunt DF. Protein identification using sequential ion/ion reactions and tandem mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 102: 9463-8. PMID 15983376 DOI: 10.1073/Pnas.0503189102 |
0.752 |
|
2004 |
Syka JE, Marto JA, Bai DL, Horning S, Senko MW, Schwartz JC, Ueberheide B, Garcia B, Busby S, Muratore T, Shabanowitz J, Hunt DF. Novel linear quadrupole ion trap/FT mass spectrometer: performance characterization and use in the comparative analysis of histone H3 post-translational modifications. Journal of Proteome Research. 3: 621-6. PMID 15253445 DOI: 10.1021/Pr0499794 |
0.68 |
|
2004 |
Barber CM, Turner FB, Wang Y, Hagstrom K, Taverna SD, Mollah S, Ueberheide B, Meyer BJ, Hunt DF, Cheung P, Allis CD. The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved. Chromosoma. 112: 360-71. PMID 15133681 DOI: 10.1007/S00412-004-0281-9 |
0.683 |
|
2003 |
Rice JC, Briggs SD, Ueberheide B, Barber CM, Shabanowitz J, Hunt DF, Shinkai Y, Allis CD. Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains. Molecular Cell. 12: 1591-8. PMID 14690610 DOI: 10.1016/S1097-2765(03)00479-9 |
0.548 |
|
2002 |
Mollah S, Ueberheide B, Busby S, Moran R, Barber CM, Shabanowitz J, Allis CD, Hunt DF. New approach to mapping of post-translational modifications of histones Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 331-332. |
0.652 |
|
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