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Arlo Randall, Ph.D. - Publications

Affiliations: 
2008 University of California, Irvine, Irvine, CA 
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Mubanga C, Simuyandi M, Mwape K, Chibesa K, Chisenga C, Chilyabanyama ON, Randall A, Liang X, Glashoff RH, Chilengi R. Use of an ETEC Proteome Microarray to Evaluate Cross-Reactivity of ETVAX Vaccine-Induced IgG Antibodies in Zambian Children. Vaccines. 11. PMID 37243042 DOI: 10.3390/vaccines11050939  0.304
2022 Macià D, Campo JJ, Moncunill G, Jairoce C, Nhabomba AJ, Mpina M, Sorgho H, Dosoo D, Traore O, Kusi KA, Williams NA, Oberai A, Randall A, Sanz H, Valim C, et al. Strong off-target antibody reactivity to malarial antigens induced by RTS,S/AS01E vaccination is associated with protection. Jci Insight. PMID 35446785 DOI: 10.1172/jci.insight.158030  0.301
2021 Camerini D, Randall AZ, Trappl-Kimmons K, Oberai A, Hung C, Edgar J, Shandling A, Huynh V, Teng AA, Hermanson G, Pablo JV, Stumpf MM, Lester SN, Harcourt J, Tamin A, et al. Mapping SARS-CoV-2 Antibody Epitopes in COVID-19 Patients with a Multi-Coronavirus Protein Microarray. Microbiology Spectrum. e0141621. PMID 34704808 DOI: 10.1128/Spectrum.01416-21  0.413
2021 Sasson JM, Campo JJ, Carpenter RM, Young MK, Randall AZ, Trappl-Kimmons K, Oberai A, Hung C, Edgar J, Teng AA, Pablo JV, Liang X, Yee A, Petri WA, Camerini D. Diverse Humoral Immune Responses in Younger and Older Adult COVID-19 Patients. Mbio. e0122921. PMID 34182775 DOI: 10.1128/mBio.01229-21  0.329
2021 Sasson JM, Campo JJ, Carpenter RM, Young MK, Randall AZ, Trappl-Kimmons K, Oberai A, Hung C, Edgar J, Teng AA, Pablo JV, Liang X, Yee A, Petri WA, Camerini D. Diverse Humoral Immune Responses in Younger and Older Adult COVID-19 Patients. Mbio. e0122921. PMID 34182775 DOI: 10.1128/mBio.01229-21  0.329
2019 Li L, Bannantine JP, Campo JJ, Randall A, Grohn YT, Schilling MA, Katani R, Radzio-Basu J, Easterling L, Kapur V. Identification of Sero-Diagnostic Antigens for the Early Diagnosis of Johne's Disease using MAP Protein Microarrays. Scientific Reports. 9: 17573. PMID 31772281 DOI: 10.1038/S41598-019-53973-X  0.325
2019 Garg N, Boyle D, Randall A, Teng A, Pablo J, Liang X, Camerini D, Lee AP. Rapid immunodiagnostics of multiple viral infections in an acoustic microstreaming device with serum and saliva samples. Lab On a Chip. PMID 30806409 DOI: 10.1039/C8Lc01303A  0.326
2019 Obiero JM, Campo JJ, Scholzen A, Randall A, Bijker EM, Roestenberg M, Hermsen CC, Teng A, Jain A, Davies DH, Sauerwein RW, Felgner PL. Antibody Biomarkers Associated with Sterile Protection Induced by Controlled Human Malaria Infection under Chloroquine Prophylaxis. Msphere. 4. PMID 30787114 DOI: 10.1128/mSphereDirect.00027-19  0.373
2018 Ndungo E, Randall A, Hazen TH, Kania DA, Trappl-Kimmons K, Liang X, Barry EM, Kotloff KL, Chakraborty S, Mani S, Rasko DA, Pasetti MF. A Novel Proteome Microarray Discriminates Targets of Human Antibody Reactivity following Oral Vaccination and Experimental Challenge. Msphere. 3. PMID 30068560 DOI: 10.1128/mSphere.00260-18  0.348
2018 Chakraborty S, Randall A, Vickers TJ, Molina D, Harro CD, DeNearing B, Brubaker J, Sack DA, Bourgeois AL, Felgner PL, Liang X, Mani S, Wenzel H, Townsend RR, Gilmore PE, et al. Human experimental challenge with enterotoxigenic Escherichia coli elicits immune responses to canonical and novel antigens relevant to vaccine development. The Journal of Infectious Diseases. PMID 29800314 DOI: 10.1093/Infdis/Jiy312  0.419
2017 Darton TC, Baker S, Randall A, Dongol S, Karkey A, Voysey M, Carter MJ, Jones C, Trappl K, Pablo J, Hung C, Teng A, Shandling A, Le T, Walker C, et al. Identification of Novel Serodiagnostic Signatures of Typhoid Fever Using a Salmonella Proteome Array. Frontiers in Microbiology. 8: 1794. PMID 28970824 DOI: 10.3389/Fmicb.2017.01794  0.399
2017 Li L, Bannantine JP, Campo JJ, Randall A, Grohn YT, Katani R, Schilling M, Radzio-Basu J, Kapur V. Identification of sero-reactive antigens for the early diagnosis of Johne's disease in cattle. Plos One. 12: e0184373. PMID 28863177 DOI: 10.1371/Journal.Pone.0184373  0.327
2017 Bannantine JP, Campo JJ, Li L, Randall A, Pablo J, Praul CA, Raygoza Garay JA, Stabel JR, Kapur V. Identification of Novel Seroreactive Antigens in Johne's Disease Cattle Using the Mycobacterium tuberculosis Protein Array. Clinical and Vaccine Immunology : Cvi. PMID 28515134 DOI: 10.1128/Cvi.00081-17  0.417
2017 Lessa-Aquino C, Lindow JC, Randall A, Wunder E, Pablo J, Nakajima R, Jasinskas A, Cruz JS, Damião AO, Nery N, Ribeiro GS, Costa F, Hagan JE, Reis MG, Ko AI, et al. Distinct antibody responses of patients with mild and severe leptospirosis determined by whole proteome microarray analysis. Plos Neglected Tropical Diseases. 11: e0005349. PMID 28141801 DOI: 10.1371/Journal.Pntd.0005349  0.363
2016 Nakajima R, Escudero R, Molina DM, Rodríguez-Vargas M, Randall A, Jasinskas A, Pablo J, Felgner PL, AuCoin D, Anda P, Davies DH. Towards development of improved serodiagnostics for tularemia using Francisella tularensis proteome microarrays. Journal of Clinical Microbiology. PMID 27098957 DOI: 10.1128/Jcm.02784-15  0.365
2015 King CL, Davies DH, Felgner P, Baum E, Jain A, Randall A, Tetteh K, Drakeley CJ, Greenhouse B. Biosignatures of Exposure/Transmission and Immunity. The American Journal of Tropical Medicine and Hygiene. PMID 26259938 DOI: 10.4269/Ajtmh.15-0037  0.349
2015 Dent AE, Nakajima R, Liang L, Baum E, Moormann AM, Sumba PO, Vulule J, Babineau D, Randall A, Davies DH, Felgner PL, Kazura JW. Plasmodium falciparum Protein Microarray Antibody Profiles Correlate With Protection From Symptomatic Malaria in Kenya. The Journal of Infectious Diseases. PMID 25883384 DOI: 10.1093/Infdis/Jiv224  0.419
2014 Patton DL, Teng A, Randall A, Liang X, Felgner PL, de la Maza LM. Whole genome identification of C. trachomatis immunodominant antigens after genital tract infections and effect of antibiotic treatment of pigtailed macaques. Journal of Proteomics. 108: 99-109. PMID 24862987 DOI: 10.1016/J.Jprot.2014.05.009  0.425
2014 Nagata K, Randall A, Baldi P. Incorporating post-translational modifications and unnatural amino acids into high-throughput modeling of protein structures. Bioinformatics (Oxford, England). 30: 1681-9. PMID 24574112 DOI: 10.1093/Bioinformatics/Btu106  0.659
2013 Feher VA, Randall A, Baldi P, Bush RM, de la Maza LM, Amaro RE. A 3-dimensional trimeric β-barrel model for Chlamydia MOMP contains conserved and novel elements of Gram-negative bacterial porins. Plos One. 8: e68934. PMID 23935908 DOI: 10.1371/Journal.Pone.0068934  0.517
2013 Baum E, Randall AZ, Zeller M, Barbour AG. Inferring epitopes of a polymorphic antigen amidst broadly cross-reactive antibodies using protein microarrays: a study of OspC proteins of Borrelia burgdorferi. Plos One. 8: e67445. PMID 23826301 DOI: 10.1371/Journal.Pone.0067445  0.741
2012 Ren D, Dalmau M, Randall A, Shindel MM, Baldi P, Wang SW. Biomimetic Design of Protein Nanomaterials for Hydrophobic Molecular Transport. Advanced Functional Materials. 22: 3170-3180. PMID 23526705 DOI: 10.1002/Adfm.201200052  0.52
2012 Lee SH, Hoshino Y, Randall A, Zeng Z, Baldi P, Doong RA, Shea KJ. Engineered synthetic polymer nanoparticles as IgG affinity ligands. Journal of the American Chemical Society. 134: 15765-72. PMID 22924890 DOI: 10.1021/Ja303612D  0.477
2012 Kao A, Randall A, Yang Y, Patel VR, Kandur W, Guan S, Rychnovsky SD, Baldi P, Huang L. Mapping the structural topology of the yeast 19S proteasomal regulatory particle using chemical cross-linking and probabilistic modeling. Molecular & Cellular Proteomics : McP. 11: 1566-77. PMID 22550050 DOI: 10.1074/Mcp.M112.018374  0.533
2012 Srikrishnan S, Randall A, Baldi P, Da Silva NA. Rationally selected single-site mutants of the Thermoascus aurantiacus endoglucanase increase hydrolytic activity on cellulosic substrates. Biotechnology and Bioengineering. 109: 1595-9. PMID 22180009 DOI: 10.1002/Bit.24414  0.433
2012 Nagata K, Randall A, Baldi P. SIDEpro: a novel machine learning approach for the fast and accurate prediction of side-chain conformations. Proteins. 80: 142-53. PMID 22072531 DOI: 10.1002/Prot.23170  0.664
2011 Andronico A, Randall A, Benz RW, Baldi P. Data-driven high-throughput prediction of the 3-D structure of small molecules: review and progress. Journal of Chemical Information and Modeling. 51: 760-76. PMID 21417267 DOI: 10.1021/Ci100223T  0.431
2011 Clemens K, Larsen L, Zhang M, Kuznetsov Y, Bilanchone V, Randall A, Harned A, Dasilva R, Nagashima K, McPherson A, Baldi P, Sandmeyer S. The TY3 Gag3 spacer controls intracellular condensation and uncoating. Journal of Virology. 85: 3055-66. PMID 21270167 DOI: 10.1128/Jvi.01055-10  0.439
2011 Kao A, Chiu CL, Vellucci D, Yang Y, Patel VR, Guan S, Randall A, Baldi P, Rychnovsky SD, Huang L. Development of a novel cross-linking strategy for fast and accurate identification of cross-linked peptides of protein complexes. Molecular & Cellular Proteomics : McP. 10: M110.002212. PMID 20736410 DOI: 10.1074/Mcp.M110.002212  0.501
2010 Magnan CN, Zeller M, Kayala MA, Vigil A, Randall A, Felgner PL, Baldi P. High-throughput prediction of protein antigenicity using protein microarray data. Bioinformatics (Oxford, England). 26: 2936-43. PMID 20934990 DOI: 10.1093/Bioinformatics/Btq551  0.715
2010 Guzmán DL, Randall A, Baldi P, Guan Z. Computational and single-molecule force studies of a macro domain protein reveal a key molecular determinant for mechanical stability. Proceedings of the National Academy of Sciences of the United States of America. 107: 1989-94. PMID 20080695 DOI: 10.1073/Pnas.0905796107  0.498
2010 Randall A, Baldi P. Transmembrane beta-barrel protein structure prediction Structural Bioinformatics of Membrane Proteins. 83-102. DOI: 10.1007/978-3-7091-0045-5_5  0.477
2009 Magnan CN, Randall A, Baldi P. SOLpro: accurate sequence-based prediction of protein solubility. Bioinformatics (Oxford, England). 25: 2200-7. PMID 19549632 DOI: 10.1093/Bioinformatics/Btp386  0.547
2008 Randall A, Baldi P. SELECTpro: effective protein model selection using a structure-based energy function resistant to BLUNDERs. Bmc Structural Biology. 8: 52. PMID 19055744 DOI: 10.1186/1472-6807-8-52  0.55
2008 Doolan DL, Mu Y, Unal B, Sundaresh S, Hirst S, Valdez C, Randall A, Molina D, Liang X, Freilich DA, Oloo JA, Blair PL, Aguiar JC, Baldi P, Davies DH, et al. Profiling humoral immune responses to P. falciparum infection with protein microarrays. Proteomics. 8: 4680-94. PMID 18937256 DOI: 10.1002/Pmic.200800194  0.751
2008 Randall A, Cheng J, Sweredoski M, Baldi P. TMBpro: secondary structure, beta-contact and tertiary structure prediction of transmembrane beta-barrel proteins. Bioinformatics (Oxford, England). 24: 513-20. PMID 18006547 DOI: 10.1093/Bioinformatics/Btm548  0.681
2007 Sundaresh S, Randall A, Unal B, Petersen JM, Belisle JT, Hartley MG, Duffield M, Titball RW, Davies DH, Felgner PL, Baldi P. From protein microarrays to diagnostic antigen discovery: a study of the pathogen Francisella tularensis. Bioinformatics (Oxford, England). 23: i508-18. PMID 17646338 DOI: 10.1093/bioinformatics/btm207  0.756
2007 Eyles JE, Unal B, Hartley MG, Newstead SL, Flick-Smith H, Prior JL, Oyston PC, Randall A, Mu Y, Hirst S, Molina DM, Davies DH, Milne T, Griffin KF, Baldi P, et al. Immunodominant Francisella tularensis antigens identified using proteome microarray. Proteomics. 7: 2172-83. PMID 17533643 DOI: 10.1002/Pmic.200600985  0.596
2006 Cheng J, Randall A, Baldi P. Prediction of protein stability changes for single-site mutations using support vector machines. Proteins. 62: 1125-32. PMID 16372356 DOI: 10.1002/Prot.20810  0.566
2005 Cheng J, Randall AZ, Sweredoski MJ, Baldi P. SCRATCH: a protein structure and structural feature prediction server. Nucleic Acids Research. 33: W72-6. PMID 15980571 DOI: 10.1093/Nar/Gki396  0.669
2005 Davies DH, Liang X, Hernandez JE, Randall A, Hirst S, Mu Y, Romero KM, Nguyen TT, Kalantari-Dehaghi M, Crotty S, Baldi P, Villarreal LP, Felgner PL. Profiling the humoral immune response to infection by using proteome microarrays: high-throughput vaccine and diagnostic antigen discovery. Proceedings of the National Academy of Sciences of the United States of America. 102: 547-52. PMID 15647345 DOI: 10.1073/Pnas.0408782102  0.607
2004 Randall AZ, Baldi P, Villarreal LP. Structural proteomics of the poxvirus family. Artificial Intelligence in Medicine. 31: 105-15. PMID 15219289 DOI: 10.1016/J.Artmed.2004.01.006  0.469
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