Daniel J. Spakowicz, Ph.D. - Publications

Affiliations: 
2013 Yale University, New Haven, CT 
Area:
RNA, Ribosome

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Adaku N, Park HB, Spakowicz DJ, Tiwari MK, Strobel SA, Crawford JM, Rogers FA. A DNA Repair Inhibitor Isolated from an Ecuadorian Fungal Endophyte Exhibits Synthetic Lethality in PTEN-Deficient Glioblastoma. Journal of Natural Products. PMID 32407116 DOI: 10.1021/Acs.Jnatprod.0C00012  0.556
2019 Johnson JS, Spakowicz DJ, Hong BY, Petersen LM, Demkowicz P, Chen L, Leopold SR, Hanson BM, Agresta HO, Gerstein M, Sodergren E, Weinstock GM. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis. Nature Communications. 10: 5029. PMID 31695033 DOI: 10.1038/S41467-019-13036-1  0.336
2017 de Sena Filho JG, Barreto IC, Soares Filho AO, Nogueira PCL, Teodoro AV, Cruz da Silva AV, Xavier HS, Rabbani ARC, Spakowicz DJ, Duringer JM. Volatile Metabolomic Composition of Vitex Species: Chemodiversity Insights and Acaricidal Activity. Frontiers in Plant Science. 8: 1931. PMID 29184560 DOI: 10.3389/Fpls.2017.01931  0.392
2016 de Sena Filho JG, Quin MB, Spakowicz DJ, Shaw JJ, Kucera K, Dunican B, Strobel SA, Schmidt-Dannert C. Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway. Fungal Biology. 120: 1050-63. PMID 27521636 DOI: 10.1016/J.Funbio.2016.04.001  0.613
2016 de Sena Filho JG, Quin MB, Spakowicz DJ, Shaw JJ, Kucera K, Dunican B, Strobel SA, Schmidt-Dannert C. Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway Fungal Biology. DOI: 10.1016/j.funbio.2016.04.001  0.582
2016 Kolařík M, Spakowicz DJ, Gazis R, Shaw J, Kubátová A, Nováková A, Chudíčková M, Forcina GC, Kang KW, Kelnarová I, Skaltsas D, Portero CE, Strobel SA, Narváez-Trujillo A. Biatriospora (Ascomycota: Pleosporales) is an ecologically diverse genus including facultative marine fungi and endophytes with biotechnological potential Plant Systematics and Evolution. 1-16. DOI: 10.1007/S00606-016-1350-2  0.545
2015 Rundell SM, Spakowicz DJ, Narváez-Trujillo A, Strobel SA. The Biological Diversity and Production of Volatile Organic Compounds by Stem-Inhabiting Endophytic Fungi of Ecuador. Journal of Fungi (Basel, Switzerland). 1: 384-396. PMID 29376917 DOI: 10.3390/Jof1030384  0.615
2015 Patridge EV, Darnell A, Kucera K, Phillips GM, Bokesch HR, Gustafson KR, Spakowicz DJ, Zhou L, Hungerford WM, Plummer M, Hoyer D, Narváez-Trujillo A, Phillips AJ, Strobel SA. Pyrrolocin A, a 3-Decalinoyltetramic Acid with Selective Biological Activity, Isolated from Amazonian Cultures of the Novel Endophyte Diaporthales sp. E6927E. Natural Product Communications. 10: 1649-54. PMID 26669095 DOI: 10.1177/1934578X1501001006  0.584
2015 Forcina GC, Castro A, Bokesch HR, Spakowicz DJ, Legaspi ME, Kucera K, Villota S, Narváez-Trujillo A, McMahon JB, Gustafson KR, Strobel SA. Stelliosphaerols A and B, Sesquiterpene-Polyol Conjugates from an Ecuadorian Fungal Endophyte. Journal of Natural Products. PMID 26651879 DOI: 10.1021/Acs.Jnatprod.5B00749  0.586
2015 Spakowicz DJ, Strobel SA. Biosynthesis of hydrocarbons and volatile organic compounds by fungi: bioengineering potential. Applied Microbiology and Biotechnology. 99: 4943-51. PMID 25957494 DOI: 10.1007/S00253-015-6641-Y  0.594
2015 Shaw JJ, Spakowicz DJ, Dalal RS, Davis JH, Lehr NA, Dunican BF, Orellana EA, Narváez-Trujillo A, Strobel SA. Biosynthesis and genomic analysis of medium-chain hydrocarbon production by the endophytic fungal isolate Nigrograna mackinnonii E5202H. Applied Microbiology and Biotechnology. 99: 3715-28. PMID 25672844 DOI: 10.1007/S00253-014-6206-5  0.63
2015 Shaw JJ, Berbasova T, Sasaki T, Jefferson-George K, Spakowicz DJ, Dunican BF, Portero CE, Narváez-Trujillo A, Strobel SA. Identification of a fungal 1,8-cineole synthase from Hypoxylon sp. with specificity determinants in common with the plant synthases. The Journal of Biological Chemistry. 290: 8511-26. PMID 25648891 DOI: 10.1074/Jbc.M114.636159  0.618
2012 Gianoulis TA, Griffin MA, Spakowicz DJ, Dunican BF, Alpha CJ, Sboner A, Sismour AM, Kodira C, Egholm M, Church GM, Gerstein MB, Strobel SA. Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides. Plos Genetics. 8: e1002558. PMID 22396667 DOI: 10.1371/Journal.Pgen.1002558  0.689
2010 Tomsheck AR, Strobel GA, Booth E, Geary B, Spakowicz D, Knighton B, Floerchinger C, Sears J, Liarzi O, Ezra D. Hypoxylon sp., an endophyte of Persea indica, producing 1,8-Cineole and Other Bioactive Volatiles with Fuel Potential Microbial Ecology. 60: 903-914. PMID 20953951 DOI: 10.1007/S00248-010-9759-6  0.449
2010 Griffin MA, Spakowicz DJ, Gianoulis TA, Strobel SA. Volatile organic compound production by organisms in the genus Ascocoryne and a re-evaluation of myco-diesel production by NRRL 50072. Microbiology (Reading, England). 156: 3814-29. PMID 20705658 DOI: 10.1099/Mic.0.041327-0  0.698
2010 Strobel GA, Knighton B, Kluck K, Ren Y, Livinghouse T, Griffin M, Spakowicz D, Sears J. The production of myco-diesel hydrocarbons and their derivatives by the endophytic fungus Gliocladium roseum (NRRL 50072) (Microbiology (2008), 154, Part 11, (3319-3328)) Microbiology. 156: 3830-3833. DOI: 10.1099/mic.0.30824-0  0.601
2010 Strobel G, Tomsheck A, Geary B, Spakowicz D, Strobel S, Mattner S, Mann R. Endophyte Strain NRRL 50072 producing volatile organics is a species of Ascocoryne Mycology. 1: 187-194. DOI: 10.1080/21501203.2010.510122  0.572
2008 Strobel GA, Knighton B, Kluck K, Ren Y, Livinghouse T, Griffin M, Spakowicz D, Sears J. The production of myco-diesel hydrocarbons and their derivatives by the endophytic fungus Gliocladium roseum (NRRL 50072). Microbiology (Reading, England). 154: 3319-28. PMID 18957585 DOI: 10.1099/Mic.0.2008/022186-0  0.621
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