Mark Benson, Ph.D. - Publications

Affiliations: 
2009 University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
protein-ligand recognition, protein flexibility, and new methods for computer-aided drug discovery

8 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Clark JJ, Benson ML, Smith RD, Carlson HA. Inherent versus induced protein flexibility: Comparisons within and between apo and holo structures. Plos Computational Biology. 15: e1006705. PMID 30699115 DOI: 10.1371/Journal.Pcbi.1006705  0.711
2012 Benson ML, Faver JC, Ucisik MN, Dashti DS, Zheng Z, Merz KM. Prediction of trypsin/molecular fragment binding affinities by free energy decomposition and empirical scores. Journal of Computer-Aided Molecular Design. 26: 647-59. PMID 22476578 DOI: 10.1007/S10822-012-9567-9  0.368
2011 Faver JC, Benson ML, He X, Roberts BP, Wang B, Marshall MS, Kennedy MR, Sherrill CD, Merz KM. Formal Estimation of Errors in Computed Absolute Interaction Energies of Protein-ligand Complexes. Journal of Chemical Theory and Computation. 7: 790-797. PMID 21666841 DOI: 10.1021/Ct100563B  0.399
2008 Carlson HA, Smith RD, Khazanov NA, Kirchhoff PD, Dunbar JB, Benson ML. Differences between high- and low-affinity complexes of enzymes and nonenzymes. Journal of Medicinal Chemistry. 51: 6432-41. PMID 18826206 DOI: 10.1021/Jm8006504  0.698
2008 Benson ML, Smith RD, Khazanov NA, Dimcheff B, Beaver J, Dresslar P, Nerothin J, Carlson HA. Binding MOAD, a high-quality protein-ligand database. Nucleic Acids Research. 36: D674-8. PMID 18055497 DOI: 10.1093/Nar/Gkm911  0.718
2007 Benson MA, Ledger J, Steiner A. Zwitterionic phosphazenium phosphazenate ligands. Chemical Communications (Cambridge, England). 3823-5. PMID 18217659 DOI: 10.1039/B708993G  0.402
2006 Smith RD, Hu L, Falkner JA, Benson ML, Nerothin JP, Carlson HA. Exploring protein-ligand recognition with Binding MOAD. Journal of Molecular Graphics & Modelling. 24: 414-25. PMID 16168689 DOI: 10.1016/J.Jmgm.2005.08.002  0.756
2005 Hu L, Benson ML, Smith RD, Lerner MG, Carlson HA. Binding MOAD (Mother Of All Databases). Proteins. 60: 333-40. PMID 15971202 DOI: 10.1002/Prot.20512  0.745
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