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Thomas E. Kuhlman, Ph.D. - Publications

Affiliations: 
2007 University of California, San Diego, La Jolla, CA 
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19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kuhlman TE. Repetitive DNA regulates gene expression. Science (New York, N.Y.). 381: 1289-1290. PMID 37733865 DOI: 10.1126/science.adk2055  0.325
2018 Lee G, Sherer NA, Kim NH, Rajic E, Kaur D, Urriola N, Martini KM, Xue C, Goldenfeld N, Kuhlman TE. Testing the retroelement invasion hypothesis for the emergence of the ancestral eukaryotic cell. Proceedings of the National Academy of Sciences of the United States of America. PMID 30455297 DOI: 10.1016/J.Bpj.2019.11.1313  0.335
2017 Englaender JA, Jones JA, Cress BF, Kuhlman TE, Linhardt RJ, Koffas MA. Effect of Genomic Integration Location on Heterologous Protein Expression and Metabolic Engineering in E. coli. Acs Synthetic Biology. PMID 28055177 DOI: 10.1021/Acssynbio.6B00350  0.379
2017 Kim NH, Lee G, Sherer NA, Martini KM, Goldenfeld N, Kuhlman TE. Real Time Study of Transposable Element Activity Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.1537  0.303
2016 Kim NH, Lee G, Sherer NA, Martini KM, Goldenfeld N, Kuhlman TE. Real-time transposable element activity in individual live cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 27298350 DOI: 10.1073/Pnas.1601833113  0.322
2016 Earnest TM, Cole JA, Peterson JR, Hallock MJ, Kuhlman TE, Luthey-Schulten Z. Ribosome biogenesis in replicating cells: Integration of experiment and theory. Biopolymers. PMID 27294303 DOI: 10.1002/Bip.22892  0.428
2015 Zhang J, Fei J, Leslie BJ, Han KY, Kuhlman TE, Ha T. Tandem Spinach Array for mRNA Imaging in Living Bacterial Cells. Scientific Reports. 5: 17295. PMID 26612428 DOI: 10.1038/Srep17295  0.349
2015 Tas H, Nguyen CT, Patel R, Kim NH, Kuhlman TE. An Integrated System for Precise Genome Modification in Escherichia coli. Plos One. 10: e0136963. PMID 26332675 DOI: 10.1371/Journal.Pone.0136963  0.361
2015 Kuhlman TE. Real Time Transposable Element Dynamics Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.1928  0.311
2015 Nguyen CT, Ngo T, Park S, Cox K, Ha T, Luthey-Schulten ZA, Kuhlman TE. Spatial Organization of Ribosome Biogenesis of Escherichia Coli Biophysical Journal. 108: 312a. DOI: 10.1016/J.Bpj.2014.11.1698  0.416
2014 Johnson Chavarria EM, Agrawal U, Tanyeri M, Kuhlman TE, Schroeder CM. Single Cell Response to Periodic Environmental Stimuli using a Microfluidic Bioreactor Biophysical Journal. 106: 225a. DOI: 10.1016/J.Bpj.2013.11.1319  0.371
2013 Kuhlman TE, Cox EC. DNA-binding-protein inhomogeneity in E. coli modeled as biphasic facilitated diffusion. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 88: 022701. PMID 24032858 DOI: 10.1103/Physreve.88.022701  0.356
2013 Kuhlman TE, Cox EC. Gene Location and DNA Density Determine Transcription Factor Distributions in E. Coli Biophysical Journal. 104: 552a. DOI: 10.1016/J.Bpj.2012.11.3060  0.403
2012 Kuhlman TE, Cox EC. Gene location and DNA density determine transcription factor distributions in Escherichia coli. Molecular Systems Biology. 8: 610. PMID 22968444 DOI: 10.1038/Msb.2012.42  0.426
2010 Garcia HG, Sanchez A, Kuhlman T, Kondev J, Phillips R. Transcription by the numbers redux: experiments and calculations that surprise. Trends in Cell Biology. 20: 723-33. PMID 20801657 DOI: 10.1016/J.Tcb.2010.07.002  0.468
2008 Levine E, Zhang Z, Kuhlman T, Hwa T. Correction: Quantitative characteristics of gene regulation by small RNA (PLoS Biology (2007) 5, 9, (e229) DOI: 10.1371/journal.pbio.0050229) Plos Biology. 6: 0191. DOI: 10.1371/Journal.Pbio.0060005  0.565
2007 Levine E, Zhang Z, Kuhlman T, Hwa T. Quantitative characteristics of gene regulation by small RNA. Plos Biology. 5: e229. PMID 17713988 DOI: 10.1371/Journal.Pbio.0050229  0.603
2007 Kuhlman T, Zhang Z, Saier MH, Hwa T. Combinatorial transcriptional control of the lactose operon of Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 104: 6043-6048. PMID 17376875 DOI: 10.1073/Pnas.0606717104  0.589
2005 Bintu L, Buchler NE, Garcia HG, Gerland U, Hwa T, Kondev J, Kuhlman T, Phillips R. Transcriptional regulation by the numbers: applications. Current Opinion in Genetics & Development. 15: 125-35. PMID 15797195 DOI: 10.1016/J.Gde.2005.02.006  0.598
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