Mira V. Han - Publications

Affiliations: 
Indiana University, Bloomington, Bloomington, IN, United States 

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Villacastin AJ, Adams KS, Boonjue R, Rushton PJ, Han M, Shen JQ. Dynamic differential evolution schemes of WRKY transcription factors in domesticated and wild rice. Scientific Reports. 11: 14887. PMID 34290268 DOI: 10.1038/s41598-021-94109-4  0.388
2019 Trimidal SG, Benjamin R, Bae JE, Han MV, Kong E, Singer A, Williams TS, Yang B, Schiller MR. Can Designer Indels Be Tailored by Gene Editing?: Can Indels Be Customized? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e1900126. PMID 31693213 DOI: 10.1002/bies.201900126  0.443
2019 Chung N, Jonaid GM, Quinton S, Ross A, Sexton CE, Alberto A, Clymer C, Churchill D, Navarro Leija O, Han MV. Correction to: Transcriptome analyses of tumor-adjacent somatic tissues reveal genes co-expressed with transposable elements. Mobile Dna. 10: 41. PMID 31632473 DOI: 10.1186/s13100-019-0183-2  0.337
2019 Chung N, Jonaid GM, Quinton S, Ross A, Sexton CE, Alberto A, Clymer C, Churchill D, Navarro Leija O, Han MV. Transcriptome analyses of tumor-adjacent somatic tissues reveal genes co-expressed with transposable elements. Mobile Dna. 10: 39. PMID 31497073 DOI: 10.1186/s13100-019-0180-5  0.365
2019 Sexton CE, Han MV. Paired-end mappability of transposable elements in the human genome. Mobile Dna. 10: 29. PMID 31320939 DOI: 10.1186/s13100-019-0172-5  0.317
2018 Hardy CM, Burke MK, Everett LJ, Han MV, Lantz KM, Gibbs AG. Genome-Wide Analysis of Starvation-Selected Drosophila melanogaster-A Genetic Model of Obesity. Molecular Biology and Evolution. 35: 50-65. PMID 29309688 DOI: 10.1093/Molbev/Msx254  0.36
2017 Graves JL, Hertweck KL, Phillips MA, Han MV, Cabral LG, Barter TT, Greer LF, Burke MK, Mueller LD, Rose MR. Genomics of Parallel Experimental Evolution in Drosophila. Molecular Biology and Evolution. PMID 28087779 DOI: 10.1093/Molbev/Msw282  0.347
2016 Navarro Leija O, Varghese S, Han MV. Measuring Accelerated Rates of Insertions and Deletions Independent of Rates of Nucleotide Substitution. Journal of Molecular Evolution. PMID 27770175 DOI: 10.1007/s00239-016-9761-9  0.326
2016 Kim JE, Song D, Kim J, Choi J, Kim JR, Yoon HS, Bae JS, Han M, Lee S, Hong JS, Song D, Kim SJ, Son MJ, Choi SW, Chung JH, et al. Oral supplementation with cocoa extract reduces UVB-induced wrinkles in hairless mouse skin. The Journal of Investigative Dermatology. PMID 26854493 DOI: 10.1016/j.jid.2015.11.032  0.327
2015 Zhang Z, Li X, Yu R, Han M, Wu Z. Isolation, structural analysis, and expression characteristics of the maize TIFY gene family. Molecular Genetics and Genomics : Mgg. PMID 25862669 DOI: 10.1007/s00438-015-1042-6  0.312
2015 Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, ... ... Han MV, et al. Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes. Science (New York, N.Y.). 347: 1258522. PMID 25554792 DOI: 10.1126/Science.1258522  0.624
2013 Han MV, Thomas GW, Lugo-Martinez J, Hahn MW. Estimating gene gain and loss rates in the presence of error in genome assembly and annotation using CAFE 3. Molecular Biology and Evolution. 30: 1987-97. PMID 23709260 DOI: 10.1093/molbev/mst100  0.576
2012 Chen S, Xu J, Liu C, Zhu Y, Nelson DR, Zhou S, Li C, Wang L, Guo X, Sun Y, Luo H, Li Y, Song J, Henrissat B, Levasseur A, ... ... Han MV, et al. Genome sequence of the model medicinal mushroom Ganoderma lucidum. Nature Communications. 3: 913. PMID 22735441 DOI: 10.1038/Ncomms1923  0.467
2012 Han MV. Characterizing gene movements between chromosomes in Drosophila. Fly. 6: 121-5. PMID 22634624 DOI: 10.4161/fly.20144  0.543
2012 Han MV, Hahn MW. Inferring the history of interchromosomal gene transposition in Drosophila using n-dimensional parsimony. Genetics. 190: 813-25. PMID 22095076 DOI: 10.1534/genetics.111.135947  0.636
2011 Snell-Rood EC, Cash A, Han MV, Kijimoto T, Andrews J, Moczek AP. Developmental decoupling of alternative phenotypes: insights from the transcriptomes of horn-polyphenic beetles. Evolution; International Journal of Organic Evolution. 65: 231-45. PMID 20731717 DOI: 10.1111/J.1558-5646.2010.01106.X  0.435
2010 Lu YK, Marden J, Han M, Swingley WD, Mastrian SD, Chowdhury SR, Hao J, Helmy T, Kim S, Kurdoglu AA, Matthies HJ, Rollo D, Stothard P, Blankenship RE, Bauer CE, et al. Metabolic flexibility revealed in the genome of the cyst-forming alpha-1 proteobacterium Rhodospirillum centenum. Bmc Genomics. 11: 325. PMID 20500872 DOI: 10.1186/1471-2164-11-325  0.399
2010 Moyle LC, Muir CD, Han MV, Hahn MW. The contribution of gene movement to the "two rules of speciation". Evolution; International Journal of Organic Evolution. 64: 1541-57. PMID 20298429 DOI: 10.1111/J.1558-5646.2010.00990.X  0.585
2009 Meisel RP, Han MV, Hahn MW. A complex suite of forces drives gene traffic from Drosophila X chromosomes. Genome Biology and Evolution. 1: 176-88. PMID 20333188 DOI: 10.1093/Gbe/Evp018  0.589
2009 Han MV, Zmasek CM. phyloXML: XML for evolutionary biology and comparative genomics. Bmc Bioinformatics. 10: 356. PMID 19860910 DOI: 10.1186/1471-2105-10-356  0.413
2009 Han MV, Demuth JP, McGrath CL, Casola C, Hahn MW. Adaptive evolution of young gene duplicates in mammals. Genome Research. 19: 859-67. PMID 19411603 DOI: 10.1101/Gr.085951.108  0.692
2009 Han MV, Hahn MW. Identifying parent-daughter relationships among duplicated genes. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 114-25. PMID 19213133  0.571
2008 Costello JC, Han MV, Hahn MW. Limitations of pseudogenes in identifying gene losses Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5267: 14-25. DOI: 10.1007/978-3-540-87989-3_2  0.543
2007 Hahn MW, Han MV, Han SG. Gene family evolution across 12 Drosophila genomes. Plos Genetics. 3: e197. PMID 17997610 DOI: 10.1371/journal.pgen.0030197  0.641
2007 Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Hodges E, ... ... Han MV, et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature. 450: 219-32. PMID 17994088 DOI: 10.1038/Nature06340  0.607
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Han MV, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.607
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