John T. West, Ph.D. - Related publications

2000 University of Alabama, Birmingham, Birmingham, AL, United States 
Microbiology Biology, Molecular Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Obregon-Perko V, Bricker K, Mensah G, Uddin F, Kumar M, Fray E, Siliciano RF, Schoof N, Horner A, Mavigner M, Liang S, Vanderford T, Sass J, Chan C, Berendam SJ, et al. SHIV.C.CH505 Persistence in ART-Suppressed Infant Macaques is Characterized by Elevated SHIV RNA in the Gut and High Abundance of Intact SHIV DNA in Naïve CD4+ T cells. Journal of Virology. PMID 33087463 DOI: 10.1128/JVI.01669-20   
2020 Brandt L, Cristinelli S, Ciuffi A. Single-Cell Analysis Reveals Heterogeneity of Virus Infection, Pathogenicity, and Host Responses: HIV as a Pioneering Example. Annual Review of Virology. 7: 333-350. PMID 32991268 DOI: 10.1146/annurev-virology-021820-102458   
2020 Siliciano JD, Siliciano RF. Nonsuppressible HIV-1 viremia: a reflection of how the reservoir persists. The Journal of Clinical Investigation. PMID 33016925 DOI: 10.1172/JCI141497   
2020 Zanoni M, Palesch D, Pinacchio C, Statzu M, Tharp GK, Paiardini M, Chahroudi A, Bosinger SE, Yoon J, Cox B, Silvestri G, Kulpa DA. Innate, non-cytolytic CD8+ T cell-mediated suppression of HIV replication by MHC-independent inhibition of virus transcription. Plos Pathogens. 16: e1008821. PMID 32941545 DOI: 10.1371/journal.ppat.1008821   
2020 Macharia GN, Yue L, Staller E, Dilernia D, Wilkins D, Song H, McGowan E, King D, Fast P, Imami N, Price MA, Sanders EJ, Hunter E, Gilmour J. Infection with multiple HIV-1 founder variants is associated with lower viral replicative capacity, faster CD4+ T cell decline and increased immune activation during acute infection. Plos Pathogens. 16: e1008853. PMID 32886726 DOI: 10.1371/journal.ppat.1008853   
2020 Shindiapina P, Ahmed EH, Mozhenkova A, Abebe T, Baiocchi RA. Immunology of EBV-Related Lymphoproliferative Disease in HIV-Positive Individuals. Frontiers in Oncology. 10: 1723. PMID 33102204 DOI: 10.3389/fonc.2020.01723   
2020 Okafo G, Valdebenito S, Donoso M, Luu R, Ajasin D, Prideaux B, Gorantla S, Eugenin EA. Role of Tunneling Nanotube-like Structures during the Early Events of HIV Infection: Novel Features of Tissue Compartmentalization and Mechanism of HIV Spread. Journal of Immunology (Baltimore, Md. : 1950). PMID 33037140 DOI: 10.4049/jimmunol.2000803   
2020 Featherstone A, Aiken C. SERINC5 Inhibits HIV-1 Infectivity by Altering the Conformation of gp120 on HIV-1 Particles. Journal of Virology. PMID 32796070 DOI: 10.1128/JVI.00594-20   
2020 Lv Y, Meng Y, Zhong J, Wan J, Zou W. Research Progress of HIV-1 Nef Inhibitors. Aids Reviews. 23. PMID 33105470 DOI: 10.24875/AIDSRev.20000050   
2020 Langer S, Yin X, Diaz A, Portillo AJ, Gordon DE, Rogers UH, Marlett JM, Krogan NJ, Young JAT, Pache L, Chanda SK. The E3 Ubiquitin-Protein Ligase Cullin 3 Regulates HIV-1 Transcription. Cells. 9. PMID 32882949 DOI: 10.3390/cells9092010   
2020 Stinn T, Kuntz S, Varon D, Huang ML, Selke S, Njikan S, Ford ES, Dragavon J, Coombs RW, Johnston C, Bull ME. Subclinical genital herpes shedding in HIV/HSV-2 co-infected women during antiretroviral therapy (ART) is associated with an increase in HIV tissue reservoirs and potentially promotes HIV evolution. Journal of Virology. PMID 33028713 DOI: 10.1128/JVI.01606-20   
2020 Wang S, Zhang Q, Hui H, Agrawal K, Karris MAY, Rana TM. An Atlas of Immune Cell Exhaustion in HIV-Infected Individuals Revealed by Single-Cell Transcriptomics. Emerging Microbes & Infections. 1-77. PMID 32954948 DOI: 10.1080/22221751.2020.1826361   
2020 Kumar S, Batra H, Singh S, Chawla H, Singh R, Katpara S, Hussain AW, Das BK, Lodha R, Kabra SK, Luthra K. Effect of combination antiretroviral therapy on human immunodeficiency virus 1 specific antibody responses in subtype-C infected children. The Journal of General Virology. PMID 32915123 DOI: 10.1099/jgv.0.001480   
2020 Telwatte S, Kim P, Chen TH, Milush JM, Somsouk M, Deeks SG, Hunt PW, Wong JK, Yukl SA. Mechanistic differences underlying HIV latency in the gut and blood contribute to differential responses to latency-reversing agents. Aids (London, England). PMID 32910065 DOI: 10.1097/QAD.0000000000002684   
2020 Kant S, Zhang N, Barbé A, Routy JP, Tremblay C, Thomas R, Szabo J, Côté P, Trottier B, LeBlanc R, Rouleau D, Harris M, Dupuy FP, Bernard NF. Polyfunctional Fc Dependent Activity of Antibodies to Native Trimeric Envelope in HIV Elite Controllers. Frontiers in Immunology. 11: 583820. PMID 33101312 DOI: 10.3389/fimmu.2020.583820   
2020 Ward AR, Mota TM, Jones RB. Immunological approaches to HIV cure. Seminars in Immunology. 101412. PMID 32981836 DOI: 10.1016/j.smim.2020.101412   
2020 Ward AR, Mota TM, Jones RB. Immunological approaches to HIV cure. Seminars in Immunology. 101412. PMID 32981836 DOI: 10.1016/j.smim.2020.101412   
2020 Buch S, Periyasamy P, Thangaraj A, Sil S, Chivero ET, Tripathi A. Opioid-Mediated HIV-1 Immunopathogenesis. Journal of Neuroimmune Pharmacology : the Official Journal of the Society On Neuroimmune Pharmacology. PMID 33029670 DOI: 10.1007/s11481-020-09960-5   
2020 Simpson SR, Singh MV, Dewhurst S, Schifitto G, Maggirwar SB. Platelets function as an acute viral reservoir during HIV-1 infection by harboring virus and T-cell complex formation. Blood Advances. 4: 4512-4521. PMID 32946568 DOI: 10.1182/bloodadvances.2020002420   
2020 Mihimit A, Adawaye C, Péré H, Costiniuk C, Koyalta D, Mbopi-Keou FX, Mboumba Bouassa RS, Talla F, Moussa S, Longo JD, Tchombou BH, Grésenguet G, Charpentier C, Bélec L. HSV-2 Infection as a Potential Cofactor for HIV Disease Progression and Selection of Drug Resistance Mutations in Adults under WHO-Recommended First-Line Antiretroviral Therapy: A Multicentric, Cross-Sectional Study in Cameroon, Central African Republic, Chad, and Gabon. Tropical Medicine and Infectious Disease. 5. PMID 32846938 DOI: 10.3390/tropicalmed5030136   
2020 Olson A, Coote C, Snyder-Cappione JE, Lin N, Sagar M. HIV-1 transcription but not intact provirus levels are associated with systemic inflammation. The Journal of Infectious Diseases. PMID 33075121 DOI: 10.1093/infdis/jiaa657   
2020 Sáez-Cirión A, Sereti I. Immunometabolism and HIV-1 pathogenesis: food for thought. Nature Reviews. Immunology. PMID 32764670 DOI: 10.1038/s41577-020-0381-7   
2020 Weinberg A, Tugizov S, Pandiyan P, Jin G, Rakshit S, Vyakarnam A, Naglik JR. Innate immune mechanisms to oral pathogens in oral mucosa of HIV-infected individuals. Oral Diseases. 26: 69-79. PMID 32862519 DOI: 10.1111/odi.13470   
2020 Butt ZA, Wong S, Rossi C, Binka M, Wong J, Yu A, Darvishian M, Alvarez M, Chapinal N, Mckee G, Gilbert M, Tyndall MW, Krajden M, Janjua NZ. Concurrent Hepatitis C and B Virus and Human Immunodeficiency Virus Infections Are Associated With Higher Mortality Risk Illustrating the Impact of Syndemics on Health Outcomes. Open Forum Infectious Diseases. 7: ofaa347. PMID 32964065 DOI: 10.1093/ofid/ofaa347   
2020 Saing CH, Prem K, Uk P, Chhoun P, Chann N, Tuot S, Mun P, Yi S. Risk factors associated with HIV and hepatitis C virus co-infection among people who inject drugs in Cambodia. The International Journal On Drug Policy. 86: 102974. PMID 33068831 DOI: 10.1016/j.drugpo.2020.102974   
2020 Warren JA, Zhou S, Xu Y, Moeser MJ, MacMillan DR, Council O, Kirchherr J, Sung JM, Roan N, Adimora AA, Joseph S, Kuruc JD, Gay CL, Margolis DM, Archin N, et al. The HIV-1 latent reservoir is largely sensitive to circulating T cells. Elife. 9. PMID 33021198 DOI: 10.7554/eLife.57246   
2020 Lorin V, Danckaert A, Porrot F, Schwartz O, Afonso PV, Mouquet H. Antibody Neutralization of HIV-1 Crossing the Blood-Brain Barrier. Mbio. 11. PMID 33082263 DOI: 10.1128/mBio.02424-20   
2020 Kishimoto N, Yamamoto K, Iga N, Kirihara C, Abe T, Takamune N, Misumi S. Alpha-enolase in viral target cells suppresses the human immunodeficiency virus type 1 integration. Retrovirology. 17: 31. PMID 32917235 DOI: 10.1186/s12977-020-00539-9   
2020 Barham MS, Whatney WE, Khayumbi J, Ongalo J, Sasser LE, Campbell A, Franczek M, Kabongo MM, Ouma SG, Hayara FO, Gandhi NR, Day CL. Activation-Induced Marker Expression Identifies -Specific CD4 T Cells in a Cytokine-Independent Manner in HIV-Infected Individuals with Latent Tuberculosis. Immunohorizons. 4: 573-584. PMID 33008839 DOI: 10.4049/immunohorizons.2000051   
2020 Sénécal V, Barat C, Tremblay MJ. The delicate balance between neurotoxicity and neuroprotection in the context of HIV-1 infection. Glia. PMID 32910482 DOI: 10.1002/glia.23904   
2020 Eleje GU, Mbachu II, Ogwaluonye UC, Kalu SO, Onubogu CU, Nweje SI, Uzochukwu CE, Nwankwo CH, Fiebai PO, Loto OM, Akaba GO, Usman HA, Rabiu A, Egeonu RO, Igue OE, ... , et al. Prevalence, seroconversion and mother-to-child transmission of dual and triplex infections of HIV, hepatitis B and C viruses among pregnant women in Nigeria: study protocol. Reproductive Health. 17: 144. PMID 32977846 DOI: 10.1186/s12978-020-00995-8   
2020 Covino DA, Kaczor-Urbanowicz KE, Lu J, Chiantore MV, Fiorucci G, Vescio MF, Catapano L, Purificato C, Galluzzo CM, Amici R, Andreotti M, Gauzzi MC, Pellegrini M, Fantuzzi L. Transcriptome Profiling of Human Monocyte-Derived Macrophages Upon CCL2 Neutralization Reveals an Association Between Activation of Innate Immune Pathways and Restriction of HIV-1 Gene Expression. Frontiers in Immunology. 11: 2129. PMID 33072075 DOI: 10.3389/fimmu.2020.02129   
2020 Dos Reis RS, Sant S, Keeney H, Wagner MCE, Ayyavoo V. Modeling HIV-1 neuropathogenesis using three-dimensional human brain organoids (hBORGs) with HIV-1 infected microglia. Scientific Reports. 10: 15209. PMID 32938988 DOI: 10.1038/s41598-020-72214-0   
2020 Howard J, Thompson TZ, MacArthur RD, Rojiani AM, White J. Widely Disseminated Cryptococcosis Manifesting in a Previously Undiagnosed Human Immunodeficiency Virus (HIV)-Positive 18-Year-Old. The American Journal of Case Reports. 21: e924410. PMID 33041322 DOI: 10.12659/AJCR.924410   
2020 Cabezas C, Trujillo O, Balbuena J, Marin L, Suárez M, Themme M, Rodriguez H, Valencia P, Crispin-Huamani L. Prevalence of retrovirus, hepatitis B and D infection in the Matsés ethnic group in Loreto, Peru. Revista Peruana De Medicina Experimental Y Salud Publica. 37: 259-264. PMID 32876214 DOI: 10.17843/rpmesp.2020.372.4696   
2020 Bermejo-Jambrina M, Blatzer M, Jauregui-Onieva P, Yordanov TE, Hörtnagl P, Valovka T, Huber LA, Wilflingseder D, Posch W. CR4 Signaling Contributes to a DC-Driven Enhanced Immune Response Against Complement-Opsonized HIV-1. Frontiers in Immunology. 11: 2010. PMID 32922405 DOI: 10.3389/fimmu.2020.02010   
2020 García M, López-Fernández L, Mínguez P, Morón-López S, Restrepo C, Navarrete-Muñoz MA, López-Bernaldo JC, Benguría A, García MI, Cabello A, Fernández-Guerrero M, De la Hera FJ, Estrada V, Barros C, Martínez-Picado J, et al. Transcriptional signature of resting-memory CD4 T cells differentiates spontaneous from treatment-induced HIV control. Journal of Molecular Medicine (Berlin, Germany). 98: 1093-1105. PMID 32556382 DOI: 10.1007/s00109-020-01930-x   
2020 Singh KP, Zerbato JM, Zhao W, Braat S, Deleage C, Tennakoon GS, Mason H, Dantanarayana A, Rhodes A, Rhodes JW, Torresi J, Harman AN, Revill PA, Crane M, Estes JD, et al. Intrahepatic CXCL10 is strongly associated with liver fibrosis in HIV-Hepatitis B co-infection. Plos Pathogens. 16: e1008744. PMID 32898182 DOI: 10.1371/journal.ppat.1008744   
2020 Sutar J, Padwal V, Nagar V, Patil P, Patel V, Bandivdekar A. Analysis of sequence diversity and selection pressure in HIV-1 clade C gp41 from India. Virusdisease. 31: 277-291. PMID 32904888 DOI: 10.1007/s13337-020-00595-x   
2020 Nguyen Quang N, Goudey S, Ségéral E, Mohammad A, Lemoine S, Blugeon C, Versapuech M, Paillart JC, Berlioz-Torrent C, Emiliani S, Gallois-Montbrun S. Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection. Retrovirology. 17: 25. PMID 32807178 DOI: 10.1186/s12977-020-00533-1   
2020 Gopalakrishnan V, Bose E, Nair U, Cheng Y, Ghebremichael M. Pre-HAART CD4+ T-lymphocytes as biomarkers of post-HAART immune recovery in HIV-infected children with or without TB co-infection. Bmc Infectious Diseases. 20: 756. PMID 33059622 DOI: 10.1186/s12879-020-05458-w   
2020 Wang Y, Zhang Y, Tang T, Zhao W, Fu S, Zhang Z, Fu Y, Xu J, Ding H, Han X, Jiang Y. Natural killer cell counts in primary HIV infection predicts disease progression and immune restoration after treatment. Virology. 550: 89-98. PMID 32920454 DOI: 10.1016/j.virol.2020.08.007   
2020 Zhao JC, Deng K. Heterogeneity of HIV-1 Latent Reservoirs. Chinese Medical Journal. PMID 32941239 DOI: 10.1097/CM9.0000000000001085   
2020 Zhang G, Campbell GR, Zhang Q, Maule E, Hanna J, Gao W, Zhang L, Spector SA. CD4 T Cell-Mimicking Nanoparticles Broadly Neutralize HIV-1 and Suppress Viral Replication through Autophagy. Mbio. 11. PMID 32934078 DOI: 10.1128/mBio.00903-20   
2020 Das J, Devadhasan A, Linde C, Broge T, Sassic J, Mangano M, O'Keefe S, Suscovich T, Streeck H, Irrinki A, Pohlmeyer C, Min-Oo G, Lin S, Weiner JA, Cihlar T, et al. Mining for humoral correlates of HIV control and latent reservoir size. Plos Pathogens. 16: e1008868. PMID 33048992 DOI: 10.1371/journal.ppat.1008868   
2020 Biswas S, Chen E, Haleyurgirisetty M, Lee S, Hewlett I, Devadas K. Comparison of miRNA Expression Profiles between HIV-1 and HIV-2 Infected Monocyte-Derived Macrophages (MDMs) and Peripheral Blood Mononuclear Cells (PBMCs). International Journal of Molecular Sciences. 21. PMID 32971935 DOI: 10.3390/ijms21186970   
2020 Zhou X, Nakashima K, Ito M, Zhang X, Sakai S, Feng C, Sun H, Chen H, Li TC, Suzuki T. Prevalence and viral loads of polyomaviruses BKPyV, JCPyV, MCPyV, TSPyV and NJPyV and hepatitis viruses HBV, HCV and HEV in HIV-infected patients in China. Scientific Reports. 10: 17066. PMID 33051567 DOI: 10.1038/s41598-020-74244-0   
2020 Sampey GC, Iordanskiy S, Pleet ML, DeMarino C, Romerio F, Mahieux R, Kashanchi F. Identification of Modulators of HIV-1 Proviral Transcription from a Library of FDA-Approved Pharmaceuticals. Viruses. 12. PMID 32977702 DOI: 10.3390/v12101067   
2020 Staudt RP, Alvarado JJ, Emert-Sedlak LA, Shi H, Shu ST, Wales TE, Engen JR, Smithgall TE. Structure, function, and inhibitor targeting of HIV-1 Nef-effector kinase complexes. The Journal of Biological Chemistry. PMID 32862141 DOI: 10.1074/jbc.REV120.012317   
2020 Klingler J, Anton H, Réal E, Zeiger M, Moog C, Mély Y, Boutant E. How HIV-1 Gag Manipulates Its Host Cell Proteins: A Focus on Interactors of the Nucleocapsid Domain. Viruses. 12. PMID 32823718 DOI: 10.3390/v12080888