Steven T. Rutherford, Ph.D. - Publications

2008 University of Wisconsin, Madison, Madison, WI 
Microbiology Biology, Molecular Biology

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Rutherford ST, Valastyan JS, Taillefumier T, Wingreen NS, Bassler BL. Comprehensive analysis reveals how single nucleotides contribute to noncoding RNA function in bacterial quorum sensing. Proceedings of the National Academy of Sciences of the United States of America. 112: E6038-47. PMID 26483489 DOI: 10.1073/pnas.1518958112  0.72
2015 Feng L, Rutherford ST, Papenfort K, Bagert JD, van Kessel JC, Tirrell DA, Wingreen NS, Bassler BL. A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. Cell. 160: 228-40. PMID 25579683 DOI: 10.1016/j.cell.2014.11.051  0.72
2015 van Kessel JC, Rutherford ST, Cong JP, Quinodoz S, Healy J, Bassler BL. Quorum sensing regulates the osmotic stress response in Vibrio harveyi. Journal of Bacteriology. 197: 73-80. PMID 25313392 DOI: 10.1128/JB.02246-14  0.72
2013 Shao Y, Feng L, Rutherford ST, Papenfort K, Bassler BL. Functional determinants of the quorum-sensing non-coding RNAs and their roles in target regulation. The Embo Journal. 32: 2158-71. PMID 23838640 DOI: 10.1038/emboj.2013.155  0.72
2013 van Kessel JC, Rutherford ST, Shao Y, Utria AF, Bassler BL. Individual and combined roles of the master regulators AphA and LuxR in control of the Vibrio harveyi quorum-sensing regulon. Journal of Bacteriology. 195: 436-43. PMID 23204455 DOI: 10.1128/JB.01998-12  0.72
2012 Lennon CW, Ross W, Martin-Tumasz S, Toulokhonov I, Vrentas CE, Rutherford ST, Lee JH, Butcher SE, Gourse RL. Direct interactions between the coiled-coil tip of DksA and the trigger loop of RNA polymerase mediate transcriptional regulation. Genes & Development. 26: 2634-46. PMID 23207918 DOI: 10.1101/gad.204693.112  0.72
2012 Rutherford ST, Bassler BL. Bacterial quorum sensing: its role in virulence and possibilities for its control. Cold Spring Harbor Perspectives in Medicine. 2. PMID 23125205 DOI: 10.1101/cshperspect.a012427  0.72
2011 Rutherford ST, van Kessel JC, Shao Y, Bassler BL. AphA and LuxR/HapR reciprocally control quorum sensing in vibrios. Genes & Development. 25: 397-408. PMID 21325136 DOI: 10.1101/gad.2015011  0.72
2009 Rutherford ST, Villers CL, Lee JH, Ross W, Gourse RL. Allosteric control of Escherichia coli rRNA promoter complexes by DksA. Genes & Development. 23: 236-48. PMID 19171784 DOI: 10.1101/gad.1745409  0.72
2008 Lamour V, Rutherford ST, Kuznedelov K, Ramagopal UA, Gourse RL, Severinov K, Darst SA. Crystal structure of Escherichia coli Rnk, a new RNA polymerase-interacting protein. Journal of Molecular Biology. 383: 367-79. PMID 18760284 DOI: 10.1016/j.jmb.2008.08.011  0.72
2008 Vrentas CE, Gaal T, Berkmen MB, Rutherford ST, Haugen SP, Vassylyev DG, Ross W, Gourse RL. Still looking for the magic spot: the crystallographically defined binding site for ppGpp on RNA polymerase is unlikely to be responsible for rRNA transcription regulation. Journal of Molecular Biology. 377: 551-64. PMID 18272182 DOI: 10.1016/j.jmb.2008.01.042  0.72
2008 Vrentas CE, Gaal T, Berkmen MB, Rutherford ST, Haugen SP, Ross W, Gourse RL. Corrigendum to "Still Looking for the Magic Spot: The Crystallographically Defined Binding Site for ppGpp on RNA Polymerase Is Unlikely toBe Responsible for rRNA Transcription Regulation" [J. Mol. Biol. 377 (2008) 551-564] (DOI:10.1016/j.jmb.2008.01.042) Journal of Molecular Biology. 379: 1130. DOI: 10.1016/j.jmb.2008.04.059  0.72
2007 Rutherford ST, Lemke JJ, Vrentas CE, Gaal T, Ross W, Gourse RL. Effects of DksA, GreA, and GreB on transcription initiation: insights into the mechanisms of factors that bind in the secondary channel of RNA polymerase. Journal of Molecular Biology. 366: 1243-57. PMID 17207814 DOI: 10.1016/j.jmb.2006.12.013  0.72
2006 Mallik P, Paul BJ, Rutherford ST, Gourse RL, Osuna R. DksA is required for growth phase-dependent regulation, growth rate-dependent control, and stringent control of fis expression in Escherichia coli. Journal of Bacteriology. 188: 5775-82. PMID 16885445 DOI: 10.1128/JB.00276-06  0.72
2006 Gourse RL, Ross W, Rutherford ST. General pathway for turning on promoters transcribed by RNA polymerases containing alternative sigma factors. Journal of Bacteriology. 188: 4589-91. PMID 16788165 DOI: 10.1128/JB.00499-06  0.72
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