Cavan S. Reilly, Ph.D. - Publications

Affiliations: 
2000 Columbia University, New York, NY 
Area:
Statistics

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Kityo C, Makamdop KN, Rothenberger M, Chipman JG, Hoskuldsson T, Beilman GJ, Grzywacz B, Mugyenyi P, Ssali F, Akondy RS, Anderson J, Schmidt TE, Reimann T, Callisto SP, Schoephoerster J, ... ... Reilly C, et al. Lymphoid tissue fibrosis is associated with impaired vaccine responses. The Journal of Clinical Investigation. PMID 29781814 DOI: 10.1172/Jci97377  0.34
2017 Hodgson S, Griffin TJ, Reilly C, Harvey S, Witthuhn BA, Sandri BJ, Kunisaki KM, Wendt CH. Plasma sphingolipids in HIV-associated chronic obstructive pulmonary disease. Bmj Open Respiratory Research. 4: e000180. PMID 28409005 DOI: 10.1136/Bmjresp-2017-000180  0.314
2016 Rawson JM, Roth ME, Xie J, Daly MB, Clouser CL, Landman SR, Reilly CS, Bonnac L, Kim B, Patterson SE, Mansky LM. Synergistic reduction of HIV-1 infectivity by 5-azacytidine and inhibitors of ribonucleotide reductase. Bioorganic & Medicinal Chemistry. PMID 27117260 DOI: 10.1016/J.Bmc.2016.03.052  0.313
2015 Rawson JM, Landman SR, Reilly CS, Bonnac L, Patterson SE, Mansky LM. Lack of Mutational Hot Spots during Decitabine-Mediated HIV-1 Mutagenesis. Antimicrobial Agents and Chemotherapy. 59: 6834-43. PMID 26282416 DOI: 10.1128/Aac.01644-15  0.311
2015 Rawson JM, Landman SR, Reilly CS, Mansky LM. HIV-1 and HIV-2 exhibit similar mutation frequencies and spectra in the absence of G-to-A hypermutation. Retrovirology. 12: 60. PMID 26160407 DOI: 10.1186/S12977-015-0180-6  0.307
2015 Haase AT, Rakasz E, Schultz-Darken N, Nephew K, Weisgrau KL, Reilly CS, Li Q, Southern PJ, Rothenberger M, Peterson ML, Schlievert PM. Glycerol Monolaurate Microbicide Protection against Repeat High-Dose SIV Vaginal Challenge. Plos One. 10: e0129465. PMID 26057743 DOI: 10.1371/Journal.Pone.0129465  0.301
2015 Rothenberger MK, Keele BF, Wietgrefe SW, Fletcher CV, Beilman GJ, Chipman JG, Khoruts A, Estes JD, Anderson J, Callisto SP, Schmidt TE, Thorkelson A, Reilly C, Perkey K, Reimann TG, et al. Large number of rebounding/founder HIV variants emerge from multifocal infection in lymphatic tissues after treatment interruption. Proceedings of the National Academy of Sciences of the United States of America. 112: E1126-34. PMID 25713386 DOI: 10.1073/Pnas.1414926112  0.366
2015 Sanchez JL, Hunt PW, Reilly CS, Hatano H, Beilman GJ, Khoruts A, Jasurda JS, Somsouk M, Thorkelson A, Russ S, Anderson J, Deeks SG, Schacker TW. Lymphoid fibrosis occurs in long-term nonprogressors and persists with antiretroviral therapy but may be reversible with curative interventions. The Journal of Infectious Diseases. 211: 1068-75. PMID 25344521 DOI: 10.1093/Infdis/Jiu586  0.362
2015 Estes JD, Reilly C, Trubey CM, Fletcher CV, Cory TJ, Piatak M, Russ S, Anderson J, Reimann TG, Star R, Smith A, Tracy RP, Berglund A, Schmidt T, Coalter V, et al. Antifibrotic therapy in simian immunodeficiency virus infection preserves CD4+ T-cell populations and improves immune reconstitution with antiretroviral therapy. The Journal of Infectious Diseases. 211: 744-54. PMID 25246534 DOI: 10.1093/Infdis/Jiu519  0.341
2014 Refsland EW, Hultquist JF, Luengas EM, Ikeda T, Shaban NM, Law EK, Brown WL, Reilly C, Emerman M, Harris RS. Natural polymorphisms in human APOBEC3H and HIV-1 Vif combine in primary T lymphocytes to affect viral G-to-A mutation levels and infectivity. Plos Genetics. 10: e1004761. PMID 25411794 DOI: 10.1371/Journal.Pgen.1004761  0.362
2014 Smith AJ, Wietgrefe SW, Shang L, Reilly CS, Southern PJ, Perkey KE, Duan L, Kohler H, Müller S, Robinson J, Carlis JV, Li Q, Johnson RP, Haase AT. Live simian immunodeficiency virus vaccine correlate of protection: immune complex-inhibitory Fc receptor interactions that reduce target cell availability. Journal of Immunology (Baltimore, Md. : 1950). 193: 3126-33. PMID 25143442 DOI: 10.4049/Jimmunol.1400822  0.336
2014 Fletcher CV, Staskus K, Wietgrefe SW, Rothenberger M, Reilly C, Chipman JG, Beilman GJ, Khoruts A, Thorkelson A, Schmidt TE, Anderson J, Perkey K, Stevenson M, Perelson AS, Douek DC, et al. Persistent HIV-1 replication is associated with lower antiretroviral drug concentrations in lymphatic tissues. Proceedings of the National Academy of Sciences of the United States of America. 111: 2307-12. PMID 24469825 DOI: 10.1073/Pnas.1318249111  0.338
2013 Sasikala-Appukuttan AK, Kim HO, Kinzel NJ, Hong JJ, Smith AJ, Wagstaff R, Reilly C, Piatak M, Lifson JD, Reeves RK, Johnson RP, Haase AT, Skinner PJ. Location and dynamics of the immunodominant CD8 T cell response to SIVΔnef immunization and SIVmac251 vaginal challenge. Plos One. 8: e81623. PMID 24349100 DOI: 10.1371/Journal.Pone.0081623  0.351
2012 Zeng M, Southern PJ, Reilly CS, Beilman GJ, Chipman JG, Schacker TW, Haase AT. Lymphoid tissue damage in HIV-1 infection depletes naïve T cells and limits T cell reconstitution after antiretroviral therapy. Plos Pathogens. 8: e1002437. PMID 22241988 DOI: 10.1371/Journal.Ppat.1002437  0.364
2011 Smith AJ, Toledo CM, Wietgrefe SW, Duan L, Schacker TW, Reilly CS, Haase AT. The immunosuppressive role of IL-32 in lymphatic tissue during HIV-1 infection. Journal of Immunology (Baltimore, Md. : 1950). 186: 6576-84. PMID 21525393 DOI: 10.4049/Jimmunol.1100277  0.343
2011 Zeng M, Smith AJ, Wietgrefe SW, Southern PJ, Schacker TW, Reilly CS, Estes JD, Burton GF, Silvestri G, Lifson JD, Carlis JV, Haase AT. Cumulative mechanisms of lymphoid tissue fibrosis and T cell depletion in HIV-1 and SIV infections. The Journal of Clinical Investigation. 121: 998-1008. PMID 21393864 DOI: 10.1172/Jci45157  0.371
2011 Smith AJ, Zeng M, Schacker TW, Reilly CS, Haase AT. 131 The Role of Chitinase 3-Like-1 in the Pathological Deposition of Collagen in Lymphatic Tissue During HIV-1 Infection Jaids Journal of Acquired Immune Deficiency Syndromes. 56: 53. DOI: 10.1097/01.Qai.0000397318.55330.8C  0.314
2010 Smith AJ, Li Q, Wietgrefe SW, Schacker TW, Reilly CS, Haase AT. Host genes associated with HIV-1 replication in lymphatic tissue. Journal of Immunology (Baltimore, Md. : 1950). 185: 5417-24. PMID 20935203 DOI: 10.4049/Jimmunol.1002197  0.344
2010 Smith AJ, Schacker TW, Reilly CS, Haase AT. A role for syndecan-1 and claudin-2 in microbial translocation during HIV-1 infection. Journal of Acquired Immune Deficiency Syndromes (1999). 55: 306-15. PMID 20700059 DOI: 10.1097/Qai.0B013E3181Ecfeca  0.379
2010 Winstead CJ, Reilly CS, Moon JJ, Jenkins MK, Hamilton SE, Jameson SC, Way SS, Khoruts A. CD4+CD25+Foxp3+ regulatory T cells optimize diversity of the conventional T cell repertoire during reconstitution from lymphopenia. Journal of Immunology (Baltimore, Md. : 1950). 184: 4749-60. PMID 20357265 DOI: 10.4049/Jimmunol.0904076  0.304
2009 Li Q, Smith AJ, Schacker TW, Carlis JV, Duan L, Reilly CS, Haase AT. Microarray analysis of lymphatic tissue reveals stage-specific, gene expression signatures in HIV-1 infection. Journal of Immunology (Baltimore, Md. : 1950). 183: 1975-82. PMID 19596987 DOI: 10.4049/Jimmunol.0803222  0.323
2009 Li Q, Skinner PJ, Ha SJ, Duan L, Mattila TL, Hage A, White C, Barber DL, O'Mara L, Southern PJ, Reilly CS, Carlis JV, Miller CJ, Ahmed R, Haase AT. Visualizing antigen-specific and infected cells in situ predicts outcomes in early viral infection. Science (New York, N.Y.). 323: 1726-9. PMID 19325114 DOI: 10.1126/Science.1168676  0.331
2009 Li Q, Estes JD, Schlievert PM, Duan L, Brosnahan AJ, Southern PJ, Reilly CS, Peterson ML, Schultz-Darken N, Brunner KG, Nephew KR, Pambuccian S, Lifson JD, Carlis JV, Haase AT. Glycerol monolaurate prevents mucosal SIV transmission. Nature. 458: 1034-8. PMID 19262509 DOI: 10.1038/Nature07831  0.375
2008 Estes J, Baker JV, Brenchley JM, Khoruts A, Barthold JL, Bantle A, Reilly CS, Beilman GJ, George ME, Douek DC, Haase AT, Schacker TW. Collagen deposition limits immune reconstitution in the gut. The Journal of Infectious Diseases. 198: 456-64. PMID 18598193 DOI: 10.1086/590112  0.337
2008 Estes JD, Gordon SN, Zeng M, Chahroudi AM, Dunham RM, Staprans SI, Reilly CS, Silvestri G, Haase AT. Early resolution of acute immune activation and induction of PD-1 in SIV-infected sooty mangabeys distinguishes nonpathogenic from pathogenic infection in rhesus macaques. Journal of Immunology (Baltimore, Md. : 1950). 180: 6798-807. PMID 18453600 DOI: 10.4049/Jimmunol.180.10.6798  0.311
2008 Li Q, Estes JD, Duan L, Jessurun J, Pambuccian S, Forster C, Wietgrefe S, Zupancic M, Schacker T, Reilly C, Carlis JV, Haase AT. Simian immunodeficiency virus-induced intestinal cell apoptosis is the underlying mechanism of the regenerative enteropathy of early infection Journal of Infectious Diseases. 197: 420-429. PMID 18199035 DOI: 10.1086/525046  0.342
2007 Estes JD, Wietgrefe S, Schacker T, Southern P, Beilman G, Reilly C, Milush JM, Lifson JD, Sodora DL, Carlis JV, Haase AT. Simian immunodeficiency virus-induced lymphatic tissue fibrosis is mediated by transforming growth factor beta 1-positive regulatory T cells and begins in early infection. The Journal of Infectious Diseases. 195: 551-61. PMID 17230415 DOI: 10.1086/510852  0.33
2007 Reilly CS, Wietgrefe SW, Sedgewick G, Haase AT. Determination of simian immunodeficiency virus production by infected activated and resting cells. Aids. 21: 163-168. PMID 17197806 DOI: 10.1097/Qad.0B013E328012565B  0.328
2007 Reilly C, Gelman A. Weighted classical variogram estimation for data with clustering Technometrics. 49: 184-194. DOI: 10.1198/004017006000000282  0.413
2006 Schacker TW, Brenchley JM, Beilman GJ, Reilly C, Pambuccian SE, Taylor J, Skarda D, Larson M, Douek DC, Haase AT. Lymphatic tissue fibrosis is associated with reduced numbers of naive CD4+ T cells in human immunodeficiency virus type 1 infection. Clinical and Vaccine Immunology : Cvi. 13: 556-60. PMID 16682476 DOI: 10.1128/Cvi.13.5.556-560.2006  0.386
2006 Loré K, Seggewiss R, Guenaga FJ, Pittaluga S, Donahue RE, Krouse A, Metzger ME, Koup RA, Reilly C, Douek DC, Dunbar CE. In vitro culture during retroviral transduction improves thymic repopulation and output after total body irradiation and autologous peripheral blood progenitor cell transplantation in rhesus macaques. Stem Cells (Dayton, Ohio). 24: 1539-48. PMID 16497945 DOI: 10.1634/Stemcells.2005-0455  0.302
2006 Estes JD, Li Q, Reynolds MR, Wietgrefe S, Duan L, Schacker T, Picker LJ, Watkins DI, Lifson JD, Reilly C, Carlis J, Haase AT. Premature induction of an immunosuppressive regulatory T cell response during acute simian immunodeficiency virus infection. The Journal of Infectious Diseases. 193: 703-12. PMID 16453267 DOI: 10.1086/500368  0.346
2005 Schacker TW, Reilly C, Beilman GJ, Taylor J, Skarda D, Krason D, Larson M, Haase AT. Amount of lymphatic tissue fibrosis in HIV infection predicts magnitude of HAART-associated change in peripheral CD4 cell count. Aids (London, England). 19: 2169-71. PMID 16284469 DOI: 10.1097/01.Aids.0000194801.51422.03  0.342
2005 Li Q, Lifson JD, Duan L, Schacker TW, Reilly C, Carlis J, Estes JD, Haase AT. Potential roles of follicular dendritic cell-associated osteopontin in lymphoid follicle pathology and repair and in B cell regulation in HIV-1 and SIV infection. The Journal of Infectious Diseases. 192: 1269-76. PMID 16136472 DOI: 10.1086/444430  0.368
2005 Li Q, Duan L, Estes JD, Ma ZM, Rourke T, Wang Y, Reilly C, Carlis J, Miller CJ, Haase AT. Peak SIV replication in resting memory CD4+ T cells depletes gut lamina propria CD4+ T cells. Nature. 434: 1148-52. PMID 15793562 DOI: 10.1038/Nature03513  0.346
2004 Reilly C, Price P, Gelman A, Sandgathe SA. Using image and curve registration for measuring the goodness of fit of spatial and temporal predictions. Biometrics. 60: 954-64. PMID 15606416 DOI: 10.1111/J.0006-341X.2004.00251.X  0.408
2004 Zhang ZQ, Wietgrefe SW, Li Q, Shore MD, Duan L, Reilly C, Lifson JD, Haase AT. Roles of substrate availability and infection of resting and activated CD4+ T cells in transmission and acute simian immunodeficiency virus infection. Proceedings of the National Academy of Sciences of the United States of America. 101: 5640-5. PMID 15064398 DOI: 10.1073/Pnas.0308425101  0.365
2002 Schacker TW, Nguyen PL, Martinez E, Reilly C, Gatell JM, Horban A, Bakowska E, Berzins B, van Leeuwen R, Wolinsky S, Haase AT, Murphy RL. Persistent abnormalities in lymphoid tissues of human immunodeficiency virus-infected patients successfully treated with highly active antiretroviral therapy. The Journal of Infectious Diseases. 186: 1092-7. PMID 12355359 DOI: 10.1086/343802  0.348
2002 Schacker TW, Nguyen PL, Beilman GJ, Wolinsky S, Larson M, Reilly C, Haase AT. Collagen deposition in HIV-1 infected lymphatic tissues and T cell homeostasis Journal of Clinical Investigation. 110: 1133-1139. DOI: 10.1172/Jci0216413  0.36
2001 Reilly C, Gelman A, Katz J. Poststratification Without Population Level Information on the Poststratifying Variable With Application to Political Polling Journal of the American Statistical Association. 96: 1-11. DOI: 10.1198/016214501750332640  0.433
Show low-probability matches.