Yong-Su Jin, Ph.D. - Publications

Affiliations: 
1998-2002 University of Wisconsin, Madison, Madison, WI 
 2008- Food Science University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
Food Science and Technology Agriculture, Microbiology Biology

147 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Jagtap SS, Bedekar AA, Liu JJ, Jin YS, Rao CV. Production of galactitol from galactose by the oleaginous yeast IFO0880. Biotechnology For Biofuels. 12: 250. PMID 31636709 DOI: 10.1186/s13068-019-1586-5  1
2019 Xu H, Liu JJ, Liu Z, Li Y, Jin YS, Zhang J. Synchronization of stochastic expressions drives the clustering of functionally related genes. Science Advances. 5: eaax6525. PMID 31633028 DOI: 10.1126/sciadv.aax6525  1
2019 Lane S, Zhang Y, Yun EJ, Ziolkowski L, Zhang G, Jin YS, Avalos JL. Xylose Assimilation Enhances Production of Isobutanol in Engineered Saccharomyces cerevisiae. Biotechnology and Bioengineering. PMID 31631318 DOI: 10.1002/bit.27202  1
2019 Kim HJ, Lee WH, Turner TL, Kwak S, Jin YS. An extra copy of the β-glucosidase gene improved the cellobiose fermentation capability of an engineered strain. 3 Biotech. 9: 367. PMID 31588391 DOI: 10.1007/s13205-019-1899-x  1
2019 Zhang Y, Lane S, Chen JM, Hammer SK, Luttinger J, Yang L, Jin YS, Avalos JL. Xylose utilization stimulates mitochondrial production of isobutanol and 2-methyl-1-butanol in . Biotechnology For Biofuels. 12: 223. PMID 31548865 DOI: 10.1186/s13068-019-1560-2  1
2019 Turner TL, Lane S, Jayakody LN, Zhang GC, Kim H, Cho W, Jin YS. Deletion of JEN1 and ADY2 reduces lactic acid yield from an engineered Saccharomyces cerevisiae, in xylose medium, expressing a heterologous lactate dehydrogenase. Fems Yeast Research. 19. PMID 31505595 DOI: 10.1093/femsyr/foz050  1
2019 Kwak S, Yun EJ, Lane S, Oh EJ, Kim KH, Jin YS. Redirection of the Glycolytic Flux Enhances Isoprenoid Production in Saccharomyces Cerevisiae. Biotechnology Journal. PMID 31466140 DOI: 10.1002/biot.201900173  1
2019 Kim JW, Lee YG, Kim SJ, Jin YS, Seo JH. Deletion of glycerol-3-phosphate dehydrogenase genes improved 2,3-butanediol production by reducing glycerol production in pyruvate decarboxylase-deficient Saccharomyces cerevisiae. Journal of Biotechnology. PMID 31421146 DOI: 10.1016/j.jbiotec.2019.08.009  1
2019 Sun L, Kwak S, Jin YS. Vitamin A production by engineered Saccharomyces cerevisiae from xylose via two-phase in situ extraction. Acs Synthetic Biology. PMID 31374167 DOI: 10.1021/acssynbio.9b00217  1
2019 Han SO, Inui M, Jin YS. Bioenergy and Biorefinery. Biotechnology Journal. 14: e1900160. PMID 31207171 DOI: 10.1002/biot.201900160  0.01
2019 Shin M, Kim JW, Ye S, Kim S, Jeong D, Lee DY, Kim JN, Jin YS, Kim KH, Kim SR. Comparative global metabolite profiling of xylose-fermenting Saccharomyces cerevisiae SR8 and Scheffersomyces stipitis. Applied Microbiology and Biotechnology. PMID 31001747 DOI: 10.1007/s00253-019-09829-5  1
2019 Liu JJ, Zhang GC, Kwak S, Oh EJ, Yun EJ, Chomvong K, Cate JHD, Jin YS. Overcoming the thermodynamic equilibrium of an isomerization reaction through oxidoreductive reactions for biotransformation. Nature Communications. 10: 1356. PMID 30902987 DOI: 10.1038/s41467-019-09288-6  1
2019 Yun EJ, Liu J, Lee J, Kwak S, Yu S, Kim KH, Jin YS. Biosynthetic routes for producing various fucosyl-oligosaccharides. Acs Synthetic Biology. PMID 30668900 DOI: 10.1021/acssynbio.8b00436  1
2019 Oh EJ, Wei N, Kwak S, Kim H, Jin YS. Overexpression of RCK1 improves acetic acid tolerance in Saccharomyces cerevisiae. Journal of Biotechnology. PMID 30615911 DOI: 10.1016/j.jbiotec.2018.12.013  1
2018 Liu JJ, Lee JW, Yun EJ, Jung SM, Seo JH, Jin YS. L-Fucose production by engineered Escherichia coli. Biotechnology and Bioengineering. PMID 30597526 DOI: 10.1002/bit.26907  1
2018 Juneja A, Zhang G, Jin YS, Singh V. Bioprocessing and technoeconomic feasibility analysis of simultaneous production of d-psicose and ethanol using engineered yeast strain KAM-2GD. Bioresource Technology. 275: 27-34. PMID 30576911 DOI: 10.1016/j.biortech.2018.12.025  1
2018 Kwak S, Jo JH, Yun EJ, Jin YS, Seo JH. Production of biofuels and chemicals from xylose using native and engineered yeast strains. Biotechnology Advances. PMID 30553928 DOI: 10.1016/j.biotechadv.2018.12.003  1
2018 Park JH, Yoon JJ, Kumar G, Jin YS, Kim SH. Effects of acclimation and pH on ammonia inhibition for mesophilic methanogenic microflora. Waste Management (New York, N.Y.). 80: 218-223. PMID 30455002 DOI: 10.1016/j.wasman.2018.09.016  0.01
2018 Liu J, Kwak S, Pathanibul P, Lee J, Yu S, Yun EJ, Lim H, Kim KH, Jin YS. Biosynthesis of a functional human milk oligosaccharide, 2'-Fucosyllactose, and L-fucose, using engineered Saccharomyces cerevisiae. Acs Synthetic Biology. PMID 30350568 DOI: 10.1021/acssynbio.8b00134  1
2018 Jayakody LN, Turner TL, Yun EJ, Kong II, Liu JJ, Jin YS. Expression of Gre2p improves tolerance of engineered xylose-fermenting Saccharomyces cerevisiae to glycolaldehyde under xylose metabolism. Applied Microbiology and Biotechnology. PMID 30027490 DOI: 10.1007/s00253-018-9216-x  1
2018 Jayakody LN, Liu JJ, Yun EJ, Turner TL, Oh EJ, Jin YS. Direct conversion of cellulose into ethanol and ethyl-β-d-glucoside via engineered Saccharomyces cerevisiae. Biotechnology and Bioengineering. PMID 30011361 DOI: 10.1002/bit.26799  1
2018 Yu S, Liu JJ, Yun EJ, Kwak S, Kim KH, Jin YS. Production of a human milk oligosaccharide 2'-fucosyllactose by metabolically engineered Saccharomyces cerevisiae. Microbial Cell Factories. 17: 101. PMID 29950173 DOI: 10.1186/s12934-018-0947-2  1
2018 Kim JS, Daum MA, Jin YS, Miller MJ. Yeast Derived LysA2 Can Control Bacterial Contamination in Ethanol Fermentation. Viruses. 10. PMID 29795003 DOI: 10.3390/v10060281  1
2018 Yun EJ, Oh EJ, Liu JJ, Yu S, Kim DH, Kwak S, Kim KH, Jin YS. Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in engineered to assimilate various sugars from renewable biomass. Biotechnology For Biofuels. 11: 140. PMID 29785207 DOI: 10.1186/s13068-018-1135-7  1
2018 Zhang ZT, Jiménez-Bonilla P, Seo SO, Lu T, Jin YS, Blaschek HP, Wang Y. Bacterial Genome Editing with CRISPR-Cas9: Taking Clostridium beijerinckii as an Example. Methods in Molecular Biology (Clifton, N.J.). 1772: 297-325. PMID 29754236 DOI: 10.1007/978-1-4939-7795-6_17  1
2018 Kim H, Oh EJ, Lane ST, Lee WH, Cate JHD, Jin YS. Enhanced cellobiose fermentation by engineered Saccharomyces cerevisiae expressing a mutant cellodextrin facilitator and cellobiose phosphorylase. Journal of Biotechnology. PMID 29660472 DOI: 10.1016/j.jbiotec.2018.04.008  1
2018 Lane S, Dong J, Jin YS. Value-added biotransformation of cellulosic sugars by engineered Saccharomyces cerevisiae. Bioresource Technology. PMID 29655899 DOI: 10.1016/j.biortech.2018.04.013  1
2018 Wei LJ, Kwak S, Liu JJ, Lane S, Hua Q, Kweon DH, Jin YS. Improved squalene production through increasing lipid contents in Saccharomyces cerevisiae. Biotechnology and Bioengineering. PMID 29573412 DOI: 10.1002/bit.26595  1
2018 Liu JJ, Zhang GC, Kong II, Yun EJ, Zheng JQ, Kweon DH, Jin YS. A mutation incausing inefficient galactose metabolism by the probiotic yeast. Applied and Environmental Microbiology. PMID 29523547 DOI: 10.1128/AEM.02858-17  1
2018 Yun EJ, Lee J, Kim DH, Kim J, Kim S, Jin YS, Kim KH. Metabolomic elucidation of the effects of media and carbon sources on fatty acid production by Yarrowia lipolytica. Journal of Biotechnology. PMID 29499237 DOI: 10.1016/j.jbiotec.2018.02.011  1
2018 Xia PF, Li Q, Tan LR, Liu MM, Jin YS, Wang SG. Synthetic Whole-Cell Biodevices for Targeted Degradation of Antibiotics. Scientific Reports. 8: 2906. PMID 29440690 DOI: 10.1038/s41598-018-21350-9  1
2018 Lane S, Xu H, Oh EJ, Kim H, Lesmana A, Jeong D, Zhang G, Tsai CS, Jin YS, Kim SR. Glucose repression can be alleviated by reducing glucose phosphorylation rate in Saccharomyces cerevisiae. Scientific Reports. 8: 2613. PMID 29422502 DOI: 10.1038/s41598-018-20804-4  1
2018 Kong II, Turner TL, Kim H, Kim SR, Jin YS. Phenotypic evaluation and characterization of twenty-one industrial Saccharomyces cerevisiae yeast strains. Fems Yeast Research. PMID 29325040 DOI: 10.1093/femsyr/foy001  1
2017 Bae JH, Kim HJ, Kim MJ, Sung BH, Jeon JH, Kim HS, Jin YS, Kweon DH, Sohn JH. Direct fermentation of Jerusalem artichoke tuber powder for production of l-lactic acid and d-lactic acid by metabolically engineered Kluyveromyces marxianus. Journal of Biotechnology. 266: 27-33. PMID 29208409 DOI: 10.1016/j.jbiotec.2017.12.001  1
2017 Seo SO, Lu T, Jin YS, Blaschek HP. Development of an oxygen-independent flavin mononucleotide-based fluorescent reporter system in Clostridium beijerinckii and its applications. Journal of Biotechnology. PMID 29158189 DOI: 10.1016/j.jbiotec.2017.11.003  1
2017 Jin YS, Cate JH. Metabolic engineering of yeast for lignocellulosic biofuel production. Current Opinion in Chemical Biology. 41: 99-106. PMID 29127883 DOI: 10.1016/j.cbpa.2017.10.025  1
2017 Seo SO, Janssen H, Magis A, Wang Y, Lu T, Price ND, Jin YS, Blaschek HP. Genomic, transcriptional and phenotypic analysis of the glucose derepressed Clostridium beijerinckii mutant exhibiting acid crash phenotype. Biotechnology Journal. PMID 28762642 DOI: 10.1002/biot.201700182  1
2017 Lee WH, Jin YS. Evaluation of ethanol production activity by engineered Saccharomyces cerevisiae fermenting cellobiose through phosphorolytic pathway in simultaneous saccharification and fermentation of cellulose. Journal of Microbiology and Biotechnology. PMID 28683531 DOI: 10.4014/jmb.1705.05039  1
2017 Kwak S, Kim SR, Xu H, Zhang GC, Lane S, Kim H, Jin YS. Enhanced isoprenoid production from xylose by engineered Saccharomyces cerevisiae. Biotechnology and Bioengineering. PMID 28667762 DOI: 10.1002/bit.26369  1
2017 Sung J, Kim S, Cabatbat JJT, Jang S, Jin YS, Jung GY, Chia N, Kim PJ. Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis. Nature Communications. 8: 15393. PMID 28585563 DOI: 10.1038/ncomms15393  1
2017 Oh EJ, Kwak S, Kim H, Jin YS. Transporter engineering for cellobiose fermentation under lower pH conditions by engineered Saccharomyces cerevisiae. Bioresource Technology. PMID 28583406 DOI: 10.1016/j.biortech.2017.05.138  1
2017 Jo JH, Park YC, Jin YS, Seo JH. Construction of efficient xylose-fermenting Saccharomyces cerevisiae through a synthetic isozyme system of xylose reductase from Scheffersomyces stipitis. Bioresource Technology. 241: 88-94. PMID 28550778 DOI: 10.1016/j.biortech.2017.05.091  1
2017 Kwak S, Jin YS. Production of fuels and chemicals from xylose by engineered Saccharomyces cerevisiae: a review and perspective. Microbial Cell Factories. 16: 82. PMID 28494761 DOI: 10.1186/s12934-017-0694-9  1
2017 Jang YJ, Seo SO, Kim SA, Li L, Kim TJ, Kim SC, Jin YS, Han NS. Elimination of the cryptic plasmid in Leuconostoc citreum by CRISPR/Cas9 system. Journal of Biotechnology. PMID 28433723 DOI: 10.1016/j.jbiotec.2017.04.018  1
2017 Kim SK, Jo JH, Park YC, Jin YS, Seo JH. Metabolic engineering of Saccharomyces cerevisiae for production of spermidine under optimal culture conditions. Enzyme and Microbial Technology. 101: 30-35. PMID 28433188 DOI: 10.1016/j.enzmictec.2017.03.008  1
2017 Rin Kim S, Skerker JM, Iok Kong I, Kim H, Maurer MJ, Zhang GC, Peng D, Wei N, Arkin AP, Jin YS. Metabolic engineering of a haploid strain derived from a triploid industrial yeast for producing cellulosic ethanol. Metabolic Engineering. PMID 28216106 DOI: 10.1016/j.ymben.2017.02.006  1
2017 Lee WH, Jin YS. Improved ethanol production by engineered Saccharomyces cerevisiae expressing a mutated cellobiose transporter during simultaneous saccharification and fermentation. Journal of Biotechnology. PMID 28143766 DOI: 10.1016/j.jbiotec.2017.01.018  1
2017 Kim SK, Jo JH, Jin YS, Seo JH. Enhanced ethanol fermentation by engineered Saccharomyces cerevisiae strains with high spermidine contents. Bioprocess and Biosystems Engineering. PMID 28120125 DOI: 10.1007/s00449-016-1733-3  1
2017 Zhang GC, Turner TL, Jin YS. Enhanced xylose fermentation by engineered yeast expressing NADH oxidase through high cell density inoculums. Journal of Industrial Microbiology & Biotechnology. PMID 28070721 DOI: 10.1007/s10295-016-1899-3  1
2016 Li X, Park A, Estrela R, Kim SR, Jin YS, Cate JH. Comparison of xylose fermentation by two high-performance engineered strains of Saccharomyces cerevisiae. Biotechnology Reports (Amsterdam, Netherlands). 9: 53-56. PMID 28352592 DOI: 10.1016/j.btre.2016.01.003  1
2016 Lee YG, Jin YS, Cha YL, Seo JH. Bioethanol production from cellulosic hydrolysates by engineered industrial Saccharomyces cerevisiae. Bioresource Technology. 228: 355-361. PMID 28088640 DOI: 10.1016/j.biortech.2016.12.042  1
2016 Kim JW, Kim J, Seo SO, Kim KH, Jin YS, Seo JH. Enhanced production of 2,3-butanediol by engineered Saccharomyces cerevisiae through fine-tuning of pyruvate decarboxylase and NADH oxidase activities. Biotechnology For Biofuels. 9: 265. PMID 27990176 DOI: 10.1186/s13068-016-0677-9  1
2016 Turner TL, Kim H, Kong II, Liu JJ, Zhang GC, Jin YS. Engineering and Evolution of Saccharomyces cerevisiae to Produce Biofuels and Chemicals. Advances in Biochemical Engineering/Biotechnology. PMID 27913828 DOI: 10.1007/10_2016_22  1
2016 Turner TL, Kim E, Hwang C, Zhang GC, Liu JJ, Jin YS. Short communication: Conversion of lactose and whey into lactic acid by engineered yeast. Journal of Dairy Science. PMID 27837988 DOI: 10.3168/jds.2016-11784  1
2016 Xia PF, Zhang GC, Walker B, Seo SO, Kwak S, Liu J, Kim H, Ort D, Wang SG, Jin YS. Recycling Carbon Dioxide during Xylose Fermentation by Engineered Saccharomyces cerevisiae. Acs Synthetic Biology. PMID 27744692 DOI: 10.1021/acssynbio.6b00167  1
2016 Bode L, Contractor N, Barile D, Pohl N, Prudden AR, Boons GJ, Jin YS, Jennewein S. Overcoming the limited availability of human milk oligosaccharides: challenges and opportunities for research and application. Nutrition Reviews. 74: 635-44. PMID 27634978 DOI: 10.1093/nutrit/nuw025  0.01
2016 Choi EJ, Kim JW, Kim SJ, Seo SO, Lane S, Park YC, Jin YS, Seo JH. Enhanced production of 2,3-butanediol in pyruvate decarboxylase-deficient Saccharomyces cerevisiae through optimizing ratio of glucose/galactose. Biotechnology Journal. PMID 27528190 DOI: 10.1002/biot.201600042  1
2016 Seo SO, Wang Y, Lu T, Jin YS, Blaschek HP. Characterization of a Clostridium beijerinckii spo0A mutant and its application for butyl butyrate production. Biotechnology and Bioengineering. PMID 27474812 DOI: 10.1002/bit.26057  1
2016 Liu JJ, Zhang GC, Oh EJ, Pathanibul P, Turner TL, Jin YS. Lactose fermentation by engineered Saccharomyces cerevisiae capable of fermenting cellobiose. Journal of Biotechnology. PMID 27457698 DOI: 10.1016/j.jbiotec.2016.07.018  1
2016 Zhang GC, Kong II, Wei N, Peng D, Turner TL, Sung BH, Sohn JH, Jin YS. Optimization of an acetate reduction pathway for producing cellulosic ethanol by engineered yeast. Biotechnology and Bioengineering. PMID 27240865 DOI: 10.1002/bit.26021  1
2016 Wang Y, Zhang ZT, Seo SO, Lynn P, Lu T, Jin YS, Blaschek HP. Gene transcription repression in Clostridium beijerinckii using CRISPR-dCas9. Biotechnology and Bioengineering. PMID 27240718 DOI: 10.1002/bit.26020  1
2016 Quarterman J, Skerker JM, Feng X, Liu IY, Zhao H, Arkin AP, Jin YS. Rapid and efficient galactose fermentation by engineered Saccharomyces cerevisiae. Journal of Biotechnology. PMID 27140870 DOI: 10.1016/j.jbiotec.2016.04.041  1
2016 Wang Y, Zhang ZT, Seo SO, Lynn P, Lu T, Jin YS, Blaschek HP. Bacterial Genome Editing with CRISPR-Cas9: Deletion, Integration, Single Nucleotide Modification, and Desirable "Clean" Mutant Selection in Clostridium beijerinckii as an Example. Acs Synthetic Biology. PMID 27115041 DOI: 10.1021/acssynbio.6b00060  1
2016 Oh EJ, Skerker JM, Kim SR, Wei N, Turner TL, Maurer MJ, Arkin AP, Jin YS. Gene amplification on demand accelerates cellobiose utilization in engineered Saccharomyces cerevisiae. Applied and Environmental Microbiology. PMID 27084006 DOI: 10.1128/AEM.00410-16  1
2016 Xia PF, Zhang GC, Liu JJ, Kwak S, Tsai CS, Kong II, Sung BH, Sohn JH, Wang SG, Jin YS. GroE chaperonins assisted functional expression of bacterial enzymes in Saccharomyces cerevisiae. Biotechnology and Bioengineering. PMID 27003667 DOI: 10.1002/bit.25980  1
2016 Liu JJ, Kong II, Zhang GC, Jayakody LN, Kim H, Xia PF, Kwak S, Sung BH, Sohn JH, Walukiewicz HE, Rao CV, Jin YS. Metabolic engineering of a probiotic Saccharomyces boulardii. Applied and Environmental Microbiology. PMID 26850302 DOI: 10.1128/AEM.00057-16  1
2016 Kim JS, Cho DH, Heo P, Jung SC, Park M, Oh EJ, Sung J, Kim PJ, Lee SC, Lee DH, Lee S, Lee CH, Shin D, Jin YS, Kweon DH. Fumarate-mediated persistence of Escherichia coli against antibiotics. Antimicrobial Agents and Chemotherapy. PMID 26810657 DOI: 10.1128/AAC.01794-15  1
2016 Seo JH, Jin YS. Editorial overview: Food biotechnology: Critical gap filler in the nexus of food, energy, and waste for a prosperous future. Current Opinion in Biotechnology. PMID 26781619 DOI: 10.1016/j.copbio.2016.01.001  1
2016 Jayakody LN, Lane S, Kim H, Jin YS. Mitigating health risks associated with alcoholic beverages through metabolic engineering. Current Opinion in Biotechnology. 37: 173-181. PMID 26760759 DOI: 10.1016/j.copbio.2015.12.001  1
2015 Xu H, Kim S, Sorek H, Lee Y, Jeong D, Kim JY, Oh EJ, Yun EJ, Wemmer DE, Kim KH, Kim SR, Jin YS. PHO13 Deletion-Induced Transcriptional Activation Prevents Sedoheptulose Accumulation during Xylose Metabolism in Engineered Saccharomyces cerevisiae. Metabolic Engineering. PMID 26724864 DOI: 10.1016/j.ymben.2015.12.007  1
2015 Park YC, Oh EJ, Jo JH, Jin YS, Seo JH. Recent advances in biological production of sugar alcohols. Current Opinion in Biotechnology. 37: 105-113. PMID 26723007 DOI: 10.1016/j.copbio.2015.11.006  1
2015 Turner TL, Zhang GC, Oh EJ, Subramaniam V, Adiputra A, Subramaniam V, Skory CD, Jang JY, Yu BJ, Park I, Jin YS. Lactic acid production from cellobiose and xylose by engineered Saccharomyces cerevisiae. Biotechnology and Bioengineering. PMID 26524688 DOI: 10.1002/bit.25875  1
2015 Zhang GC, Liu JJ, Kong II, Kwak S, Jin YS. Combining C6 and C5 sugar metabolism for enhancing microbial bioconversion. Current Opinion in Chemical Biology. 29: 49-57. PMID 26432418 DOI: 10.1016/j.cbpa.2015.09.008  1
2015 Liao C, Seo SO, Celik V, Liu H, Kong W, Wang Y, Blaschek H, Jin YS, Lu T. Integrated, systems metabolic picture of acetone-butanol-ethanol fermentation by Clostridium acetobutylicum. Proceedings of the National Academy of Sciences of the United States of America. 112: 8505-10. PMID 26100881 DOI: 10.1073/pnas.1423143112  1
2015 Turner TL, Zhang GC, Kim SR, Subramaniam V, Steffen D, Skory CD, Jang JY, Yu BJ, Jin YS. Lactic acid production from xylose by engineered Saccharomyces cerevisiae without PDC or ADH deletion. Applied Microbiology and Biotechnology. PMID 26043971 DOI: 10.1007/s00253-015-6701-3  1
2015 Yun EJ, Kwak S, Kim SR, Park YC, Jin YS, Kim KH. Production of (S)-3-hydroxybutyrate by metabolically engineered Saccharomyces cerevisiae. Journal of Biotechnology. 209: 23-30. PMID 26026703 DOI: 10.1016/j.jbiotec.2015.05.017  1
2015 Tsai CS, Kong II, Lesmana A, Million G, Zhang GC, Kim SR, Jin YS. Rapid and marker-free refactoring of xylose-fermenting yeast strains with Cas9/CRISPR. Biotechnology and Bioengineering. PMID 25943337 DOI: 10.1002/bit.25632  1
2015 Lewis ZT, Totten SM, Smilowitz JT, Popovic M, Parker E, Lemay DG, Van Tassell ML, Miller MJ, Jin YS, German JB, Lebrilla CB, Mills DA. Maternal fucosyltransferase 2 status affects the gut bifidobacterial communities of breastfed infants. Microbiome. 3: 13. PMID 25922665 DOI: 10.1186/s40168-015-0071-z  1
2015 Kim JW, Seo SO, Zhang GC, Jin YS, Seo JH. Expression of Lactococcus lactis NADH oxidase increases 2,3-butanediol production in Pdc-deficient Saccharomyces cerevisiae. Bioresource Technology. 191: 512-9. PMID 25769689 DOI: 10.1016/j.biortech.2015.02.077  1
2015 Kim S, Sung J, Foo M, Jin YS, Kim PJ. Uncovering the nutritional landscape of food. Plos One. 10: e0118697. PMID 25768022 DOI: 10.1371/journal.pone.0118697  1
2015 Kim SK, Jin YS, Choi IG, Park YC, Seo JH. Enhanced tolerance of Saccharomyces cerevisiae to multiple lignocellulose-derived inhibitors through modulation of spermidine contents. Metabolic Engineering. 29: 46-55. PMID 25724339 DOI: 10.1016/j.ymben.2015.02.004  1
2015 Kim SM, Guo J, Kwak S, Jin YS, Lee DK, Singh V. Effects of genetic variation and growing condition of prairie cordgrass on feedstock composition and ethanol yield. Bioresource Technology. 183: 70-7. PMID 25723129 DOI: 10.1016/j.biortech.2015.02.020  1
2015 Wang Y, Zhang ZT, Seo SO, Choi K, Lu T, Jin YS, Blaschek HP. Markerless chromosomal gene deletion in Clostridium beijerinckii using CRISPR/Cas9 system. Journal of Biotechnology. 200: 1-5. PMID 25680931 DOI: 10.1016/j.jbiotec.2015.02.005  1
2015 Li X, Yu VY, Lin Y, Chomvong K, Estrela R, Park A, Liang JM, Znameroski EA, Feehan J, Kim SR, Jin YS, Glass NL, Cate JH. Expanding xylose metabolism in yeast for plant cell wall conversion to biofuels. Elife. 4. PMID 25647728 DOI: 10.7554/eLife.05896  1
2015 Wei N, Oh EJ, Million G, Cate JH, Jin YS. Simultaneous Utilization of Cellobiose, Xylose, and Acetic Acid from Lignocellulosic Biomass for Biofuel Production by an Engineered Yeast Platform. Acs Synthetic Biology. 4: 707-13. PMID 25587748 DOI: 10.1021/sb500364q  1
2015 Kim SR, Xu H, Lesmana A, Kuzmanovic U, Au M, Florencia C, Oh EJ, Zhang G, Kim KH, Jin YS. Deletion of PHO13, encoding haloacid dehalogenase type IIA phosphatase, results in upregulation of the pentose phosphate pathway in Saccharomyces cerevisiae. Applied and Environmental Microbiology. 81: 1601-9. PMID 25527558 DOI: 10.1128/AEM.03474-14  1
2015 Quarterman J, Kim SR, Kim PJ, Jin YS. Enhanced hexose fermentation by Saccharomyces cerevisiae through integration of stoichiometric modeling and genetic screening. Journal of Biotechnology. 194: 48-57. PMID 25435378 DOI: 10.1016/j.jbiotec.2014.11.017  1
2015 Lane S, Zhang S, Wei N, Rao C, Jin YS. Development and physiological characterization of cellobiose-consuming Yarrowia lipolytica. Biotechnology and Bioengineering. 112: 1012-22. PMID 25421388 DOI: 10.1002/bit.25499  1
2014 Lin Y, Chomvong K, Acosta-Sampson L, Estrela R, Galazka JM, Kim SR, Jin YS, Cate JH. Leveraging transcription factors to speed cellobiose fermentation by Saccharomyces cerevisiae. Biotechnology For Biofuels. 7: 126. PMID 25435910 DOI: 10.1186/s13068-014-0126-6  1
2014 Zhang GC, Kong II, Kim H, Liu JJ, Cate JH, Jin YS. Construction of a quadruple auxotrophic mutant of an industrial polyploid saccharomyces cerevisiae strain by using RNA-guided Cas9 nuclease. Applied and Environmental Microbiology. 80: 7694-701. PMID 25281382 DOI: 10.1128/AEM.02310-14  1
2014 Tsai CS, Kwak S, Turner TL, Jin YS. Yeast synthetic biology toolbox and applications for biofuel production. Fems Yeast Research. PMID 25195615 DOI: 10.1111/1567-1364.12206  1
2014 Chomvong K, Kordi? V, Li X, Bauer S, Gillespie AE, Ha SJ, Oh EJ, Galazka JM, Jin YS, Cate JH. Overcoming inefficient cellobiose fermentation by cellobiose phosphorylase in the presence of xylose. Biotechnology For Biofuels. 7: 85. PMID 24944578 DOI: 10.1186/1754-6834-7-85  1
2014 Nan H, Seo SO, Oh EJ, Seo JH, Cate JH, Jin YS. 2,3-butanediol production from cellobiose by engineered Saccharomyces cerevisiae. Applied Microbiology and Biotechnology. 98: 5757-64. PMID 24743979 DOI: 10.1007/s00253-014-5683-x  1
2014 Kim SJ, Seo SO, Park YC, Jin YS, Seo JH. Production of 2,3-butanediol from xylose by engineered Saccharomyces cerevisiae. Journal of Biotechnology. 192: 376-82. PMID 24480571 DOI: 10.1016/j.jbiotec.2013.12.017  1
2014 Kim H, Lee WH, Galazka JM, Cate JH, Jin YS. Analysis of cellodextrin transporters from Neurospora crassa in Saccharomyces cerevisiae for cellobiose fermentation. Applied Microbiology and Biotechnology. 98: 1087-94. PMID 24190499 DOI: 10.1007/s00253-013-5339-2  1
2014 Bae YH, Kang KH, Jin YS, Seo JH. Molecular cloning and expression of fungal cellobiose transporters and β-glucosidases conferring efficient cellobiose fermentation in Saccharomyces cerevisiae. Journal of Biotechnology. 169: 34-41. PMID 24184384 DOI: 10.1016/j.jbiotec.2013.10.030  1
2013 Ha SJ, Kim SR, Kim H, Du J, Cate JH, Jin YS. Continuous co-fermentation of cellobiose and xylose by engineered Saccharomyces cerevisiae. Bioresource Technology. 149: 525-31. PMID 24140899 DOI: 10.1016/j.biortech.2013.09.082  1
2013 Wei N, Quarterman J, Kim SR, Cate JH, Jin YS. Enhanced biofuel production through coupled acetic acid and xylose consumption by engineered yeast. Nature Communications. 4: 2580. PMID 24105024 DOI: 10.1038/ncomms3580  1
2013 Li S, Ha SJ, Kim HJ, Galazka JM, Cate JH, Jin YS, Zhao H. Investigation of the functional role of aldose 1-epimerase in engineered cellobiose utilization. Journal of Biotechnology. 168: 1-6. PMID 23954547 DOI: 10.1016/j.jbiotec.2013.08.003  1
2013 Kim SJ, Seo SO, Jin YS, Seo JH. Production of 2,3-butanediol by engineered Saccharomyces cerevisiae. Bioresource Technology. 146: 274-81. PMID 23941711 DOI: 10.1016/j.biortech.2013.07.081  1
2013 Wang Y, Li X, Milne CB, Janssen H, Lin W, Phan G, Hu H, Jin YS, Price ND, Blaschek HP. Development of a gene knockout system using mobile group II introns (Targetron) and genetic disruption of acid production pathways in Clostridium beijerinckii. Applied and Environmental Microbiology. 79: 5853-63. PMID 23872562 DOI: 10.1128/AEM.00971-13  1
2013 Lee WH, Nan H, Kim HJ, Jin YS. Simultaneous saccharification and fermentation by engineered Saccharomyces cerevisiae without supplementing extracellular β-glucosidase. Journal of Biotechnology. 167: 316-22. PMID 23835155 DOI: 10.1016/j.jbiotec.2013.06.016  1
2013 Kim HJ, Lee HR, Kim CS, Jin YS, Seo JH. Investigation of protein expression profiles of erythritol-producing Candida magnoliae in response to glucose perturbation. Enzyme and Microbial Technology. 53: 174-80. PMID 23830459 DOI: 10.1016/j.enzmictec.2013.03.016  1
2013 Kim HJ, Turner TL, Jin YS. Combinatorial genetic perturbation to refine metabolic circuits for producing biofuels and biochemicals. Biotechnology Advances. 31: 976-85. PMID 23562845 DOI: 10.1016/j.biotechadv.2013.03.010  1
2013 Kim SR, Park YC, Jin YS, Seo JH. Strain engineering of Saccharomyces cerevisiae for enhanced xylose metabolism. Biotechnology Advances. 31: 851-61. PMID 23524005 DOI: 10.1016/j.biotechadv.2013.03.004  1
2013 Wei N, Xu H, Kim SR, Jin YS. Deletion of FPS1, encoding aquaglyceroporin Fps1p, improves xylose fermentation by engineered Saccharomyces cerevisiae. Applied and Environmental Microbiology. 79: 3193-201. PMID 23475614 DOI: 10.1128/AEM.00490-13  1
2013 Kim SR, Skerker JM, Kang W, Lesmana A, Wei N, Arkin AP, Jin YS. Rational and evolutionary engineering approaches uncover a small set of genetic changes efficient for rapid xylose fermentation in Saccharomyces cerevisiae. Plos One. 8: e57048. PMID 23468911 DOI: 10.1371/journal.pone.0057048  1
2013 Lee WH, Kim MD, Jin YS, Seo JH. Engineering of NADPH regenerators in Escherichia coli for enhanced biotransformation. Applied Microbiology and Biotechnology. 97: 2761-72. PMID 23420268 DOI: 10.1007/s00253-013-4750-z  1
2013 Kim SR, Kwee NR, Kim H, Jin YS. Feasibility of xylose fermentation by engineered Saccharomyces cerevisiae overexpressing endogenous aldose reductase (GRE3), xylitol dehydrogenase (XYL2), and xylulokinase (XYL3) from Scheffersomyces stipitis. Fems Yeast Research. 13: 312-21. PMID 23398717 DOI: 10.1111/1567-1364.12036  1
2013 Kim SR, Lee KS, Kong II, Lesmana A, Lee WH, Seo JH, Kweon DH, Jin YS. Construction of an efficient xylose-fermenting diploid Saccharomyces cerevisiae strain through mating of two engineered haploid strains capable of xylose assimilation. Journal of Biotechnology. 164: 105-11. PMID 23376240 DOI: 10.1016/j.jbiotec.2012.12.012  1
2013 Guo B, Zhang Y, Yu G, Lee WH, Jin YS, Morgenroth E. Two-stage acidic-alkaline hydrothermal pretreatment of lignocellulose for the high recovery of cellulose and hemicellulose sugars. Applied Biochemistry and Biotechnology. 169: 1069-87. PMID 23306881 DOI: 10.1007/s12010-012-0038-5  1
2013 Ha SJ, Kim H, Lin Y, Jang MU, Galazka JM, Kim TJ, Cate JH, Jin YS. Single amino acid substitutions in HXT2.4 from Scheffersomyces stipitis lead to improved cellobiose fermentation by engineered Saccharomyces cerevisiae. Applied and Environmental Microbiology. 79: 1500-7. PMID 23263959 DOI: 10.1128/AEM.03253-12  1
2013 Wei N, Quarterman J, Jin YS. Marine macroalgae: an untapped resource for producing fuels and chemicals. Trends in Biotechnology. 31: 70-7. PMID 23245657 DOI: 10.1016/j.tibtech.2012.10.009  1
2013 Ha SJ, Galazka JM, Joong Oh E, Kordić V, Kim H, Jin YS, Cate JH. Energetic benefits and rapid cellobiose fermentation by Saccharomyces cerevisiae expressing cellobiose phosphorylase and mutant cellodextrin transporters. Metabolic Engineering. 15: 134-43. PMID 23178501 DOI: 10.1016/j.ymben.2012.11.005  1
2013 Oh EJ, Ha SJ, Rin Kim S, Lee WH, Galazka JM, Cate JH, Jin YS. Enhanced xylitol production through simultaneous co-utilization of cellobiose and xylose by engineered Saccharomyces cerevisiae. Metabolic Engineering. 15: 226-34. PMID 23103205 DOI: 10.1016/j.ymben.2012.09.003  1
2013 Lee KS, Kim JS, Heo P, Yang TJ, Sung YJ, Cheon Y, Koo HM, Yu BJ, Seo JH, Jin YS, Park JC, Kweon DH. Characterization of Saccharomyces cerevisiae promoters for heterologous gene expression in Kluyveromyces marxianus. Applied Microbiology and Biotechnology. 97: 2029-41. PMID 22911091 DOI: 10.1007/s00253-012-4306-7  1
2012 Lee WH, Pathanibul P, Quarterman J, Jo JH, Han NS, Miller MJ, Jin YS, Seo JH. Whole cell biosynthesis of a functional oligosaccharide, 2'-fucosyllactose, using engineered Escherichia coli. Microbial Cell Factories. 11: 48. PMID 22545760 DOI: 10.1186/1475-2859-11-48  1
2012 Lee WH, Seo SO, Bae YH, Nan H, Jin YS, Seo JH. Isobutanol production in engineered Saccharomyces cerevisiae by overexpression of 2-ketoisovalerate decarboxylase and valine biosynthetic enzymes. Bioprocess and Biosystems Engineering. 35: 1467-75. PMID 22543927 DOI: 10.1007/s00449-012-0736-y  1
2012 Kim SR, Ha SJ, Kong II, Jin YS. High expression of XYL2 coding for xylitol dehydrogenase is necessary for efficient xylose fermentation by engineered Saccharomyces cerevisiae. Metabolic Engineering. 14: 336-43. PMID 22521925 DOI: 10.1016/j.ymben.2012.04.001  1
2012 Jin YS, Cate JH. Model-guided strain improvement: simultaneous hydrolysis and co-fermentation of cellulosic sugars. Biotechnology Journal. 7: 328-9. PMID 22383191 DOI: 10.1002/biot.201100489  1
2012 Guo B, Zhang Y, Ha SJ, Jin YS, Morgenroth E. Combined biomimetic and inorganic acids hydrolysis of hemicellulose in Miscanthus for bioethanol production. Bioresource Technology. 110: 278-87. PMID 22366607 DOI: 10.1016/j.biortech.2012.01.133  1
2012 Kim SR, Ha SJ, Wei N, Oh EJ, Jin YS. Simultaneous co-fermentation of mixed sugars: a promising strategy for producing cellulosic ethanol. Trends in Biotechnology. 30: 274-82. PMID 22356718 DOI: 10.1016/j.tibtech.2012.01.005  1
2012 Cha C, Kim SR, Jin YS, Kong H. Tuning structural durability of yeast-encapsulating alginate gel beads with interpenetrating networks for sustained bioethanol production. Biotechnology and Bioengineering. 109: 63-73. PMID 21732329 DOI: 10.1002/bit.23258  1
2011 Lu CH, Choi JH, Engelmann Moran N, Jin YS, Erdman JW. Laboratory-scale production of 13C-labeled lycopene and phytoene by bioengineered Escherichia coli. Journal of Agricultural and Food Chemistry. 59: 9996-10005. PMID 21888370 DOI: 10.1021/jf202599z  1
2011 Kim JS, Heo P, Yang TJ, Lee KS, Jin YS, Kim SK, Shin D, Kweon DH. Bacterial persisters tolerate antibiotics by not producing hydroxyl radicals. Biochemical and Biophysical Research Communications. 413: 105-10. PMID 21872573 DOI: 10.1016/j.bbrc.2011.08.063  1
2011 Ha SJ, Wei Q, Kim SR, Galazka JM, Cate JH, Cate J, Jin YS. Cofermentation of cellobiose and galactose by an engineered Saccharomyces cerevisiae strain. Applied and Environmental Microbiology. 77: 5822-5. PMID 21705527 DOI: 10.1128/AEM.05228-11  1
2011 Ha SJ, Kim SR, Choi JH, Park MS, Jin YS. Xylitol does not inhibit xylose fermentation by engineered Saccharomyces cerevisiae expressing xylA as severely as it inhibits xylose isomerase reaction in vitro. Applied Microbiology and Biotechnology. 92: 77-84. PMID 21655987 DOI: 10.1007/s00253-011-3345-9  1
2011 Lee KS, Hong ME, Jung SC, Ha SJ, Yu BJ, Koo HM, Park SM, Seo JH, Kweon DH, Park JC, Jin YS. Improved galactose fermentation of Saccharomyces cerevisiae through inverse metabolic engineering. Biotechnology and Bioengineering. 108: 621-31. PMID 21246509 DOI: 10.1002/bit.22988  1
2010 Kim SR, Lee KS, Choi JH, Ha SJ, Kweon DH, Seo JH, Jin YS. Repeated-batch fermentations of xylose and glucose-xylose mixtures using a respiration-deficient Saccharomyces cerevisiae engineered for xylose metabolism. Journal of Biotechnology. 150: 404-7. PMID 20933550 DOI: 10.1016/j.jbiotec.2010.09.962  1
2010 Jung SC, Smith CL, Lee KS, Hong ME, Kweon DH, Stephanopoulos G, Jin YS. Restoration of growth phenotypes of Escherichia coli DH5alpha in minimal media through reversal of a point mutation in purB. Applied and Environmental Microbiology. 76: 6307-9. PMID 20675450 DOI: 10.1128/AEM.01210-10  1
2010 Hong ME, Lee KS, Yu BJ, Sung YJ, Park SM, Koo HM, Kweon DH, Park JC, Jin YS. Identification of gene targets eliciting improved alcohol tolerance in Saccharomyces cerevisiae through inverse metabolic engineering. Journal of Biotechnology. 149: 52-9. PMID 20600383 DOI: 10.1016/j.jbiotec.2010.06.006  1
2009 Shin JY, Shin JI, Kim JS, Yang YS, Hwang Y, Yang JS, Shin D, Seo JH, Jin YS, Park YC, Hwang JS, Kweon DH. Assembly of Coenzyme Q10 nanostructure resembling nascent discoidal high density lipoprotein particle. Biochemical and Biophysical Research Communications. 388: 217-21. PMID 19646960 DOI: 10.1016/j.bbrc.2009.07.140  1
2009 Tyo KE, Jin YS, Espinoza FA, Stephanopoulos G. Identification of gene disruptions for increased poly-3-hydroxybutyrate accumulation in Synechocystis PCC 6803. Biotechnology Progress. 25: 1236-43. PMID 19606467 DOI: 10.1002/btpr.228  1
2009 Lee J, Seo E, Kweon DH, Park K, Jin YS. Fermentation of rice bran and defatted rice bran for butanol 5 production using clostridium beijerinckii NCIMB 8052. Journal of Microbiology and Biotechnology. 19: 482-90. PMID 19494696  1
2008 Jung CH, Yang YS, Kim JS, Shin JI, Jin YS, Shin JY, Lee JH, Chung KM, Hwang JS, Oh JM, Shin YK, Kweon DH. A search for synthetic peptides that inhibit soluble N-ethylmaleimide sensitive-factor attachment receptor-mediated membrane fusion. The Febs Journal. 275: 3051-63. PMID 18459979 DOI: 10.1111/j.1742-4658.2008.06458.x  1
2007 Jin YS, Stephanopoulos G. Multi-dimensional gene target search for improving lycopene biosynthesis in Escherichia coli. Metabolic Engineering. 9: 337-47. PMID 17509919 DOI: 10.1016/j.ymben.2007.03.003  1
2007 Jeffries TW, Grigoriev IV, Grimwood J, Laplaza JM, Aerts A, Salamov A, Schmutz J, Lindquist E, Dehal P, Shapiro H, Jin YS, Passoth V, Richardson PM. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Nature Biotechnology. 25: 319-26. PMID 17334359 DOI: 10.1038/nbt1290  1
2005 Jin YS, Alper H, Yang YT, Stephanopoulos G. Improvement of xylose uptake and ethanol production in recombinant Saccharomyces cerevisiae through an inverse metabolic engineering approach. Applied and Environmental Microbiology. 71: 8249-56. PMID 16332810 DOI: 10.1128/AEM.71.12.8249-8256.2005  1
2005 Alper H, Jin YS, Moxley JF, Stephanopoulos G. Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli. Metabolic Engineering. 7: 155-64. PMID 15885614 DOI: 10.1016/j.ymben.2004.12.003  1
2005 Jin YS, Cruz J, Jeffries TW. Xylitol production by a Pichia stipitis D-xylulokinase mutant. Applied Microbiology and Biotechnology. 68: 42-5. PMID 15635458 DOI: 10.1007/s00253-004-1854-5  1
2004 Jin YS, Laplaza JM, Jeffries TW. Saccharomyces cerevisiae engineered for xylose metabolism exhibits a respiratory response. Applied and Environmental Microbiology. 70: 6816-25. PMID 15528549 DOI: 10.1128/AEM.70.11.6816-6825.2004  1
2004 Jin YS, Jeffries TW. Stoichiometric network constraints on xylose metabolism by recombinant Saccharomyces cerevisiae. Metabolic Engineering. 6: 229-38. PMID 15256213 DOI: 10.1016/j.ymben.2003.11.006  1
2004 Jeffries TW, Jin YS. Metabolic engineering for improved fermentation of pentoses by yeasts. Applied Microbiology and Biotechnology. 63: 495-509. PMID 14595523 DOI: 10.1007/s00253-003-1450-0  1
2003 Jin YS, Jeffries TW. Changing flux of xylose metabolites by altering expression of xylose reductase and xylitol dehydrogenase in recombinant Saccharomyces cerevisiae. Applied Biochemistry and Biotechnology. 105: 277-86. PMID 12721451 DOI: 10.1385/ABAB:106:1-3:277  1
2003 Jin YS, Ni H, Laplaza JM, Jeffries TW. Optimal growth and ethanol production from xylose by recombinant Saccharomyces cerevisiae require moderate D-xylulokinase activity. Applied and Environmental Microbiology. 69: 495-503. PMID 12514033 DOI: 10.1128/AEM.69.1.495-503.2003  1
2002 Jin YS, Jones S, Shi NQ, Jeffries TW. Molecular cloning of XYL3 (D-xylulokinase) from Pichia stipitis and characterization of its physiological function. Applied and Environmental Microbiology. 68: 1232-9. PMID 11872473 DOI: 10.1128/AEM.68.3.1232-1239.2002  1
2000 Jeffries TW, Jin YS. Ethanol and thermotolerance in the bioconversion of xylose by yeasts. Advances in Applied Microbiology. 47: 221-68. PMID 12876799  1
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