| Year |
Citation |
Score |
| 2022 |
Hedouin S, Logsdon GA, Underwood JG, Biggins S. A transcriptional roadblock protects yeast centromeres. Nucleic Acids Research. PMID 35253883 DOI: 10.1093/nar/gkac117 |
0.346 |
|
| 2021 |
Brannan KW, Chaim IA, Marina RJ, Yee BA, Kofman ER, Lorenz DA, Jagannatha P, Dong KD, Madrigal AA, Underwood JG, Yeo GW. Robust single-cell discovery of RNA targets of RNA-binding proteins and ribosomes. Nature Methods. 18: 507-519. PMID 33963355 DOI: 10.1038/s41592-021-01128-0 |
0.422 |
|
| 2019 |
Underwood JG, Smith JL, Call LF, Tseng E, Hylkema TA, Ries RE, Leonti AR, Farrar JE, Triche TJ, Meshinchi S. Discovery of Novel IL3RA (CD123) Isoforms By Long Read Transcriptomics, Heterogeneous Expression Among AML Patient Cohorts and the Implications for Anti-CD123 Therapeutics Blood. 134: 4658-4658. DOI: 10.1182/Blood-2019-131508 |
0.302 |
|
| 2016 |
Uzilov AV, Underwood JG. High-Throughput Nuclease Probing of RNA Structures Using FragSeq. Methods in Molecular Biology (Clifton, N.J.). 1490: 105-34. PMID 27665596 DOI: 10.1007/978-1-4939-6433-8_8 |
0.328 |
|
| 2015 |
Gordon SP, Tseng E, Salamov A, Zhang J, Meng X, Zhao Z, Kang D, Underwood J, Grigoriev IV, Figueroa M, Schilling JS, Chen F, Wang Z. Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing. Plos One. 10: e0132628. PMID 26177194 DOI: 10.1371/Journal.Pone.0132628 |
0.328 |
|
| 2014 |
Li S, Tighe SW, Nicolet CM, Grove D, Levy S, Farmerie W, Viale A, Wright C, Schweitzer PA, Gao Y, Kim D, Boland J, Hicks B, Kim R, Chhangawala S, ... ... Underwood JG, et al. Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study. Nature Biotechnology. 32: 915-25. PMID 25150835 DOI: 10.1038/Nbt.2972 |
0.339 |
|
| 2013 |
Au KF, Sebastiano V, Afshar PT, Durruthy JD, Lee L, Williams BA, van Bakel H, Schadt EE, Reijo-Pera RA, Underwood JG, Wong WH. Characterization of the human ESC transcriptome by hybrid sequencing. Proceedings of the National Academy of Sciences of the United States of America. 110: E4821-30. PMID 24282307 DOI: 10.1073/Pnas.1320101110 |
0.325 |
|
| 2012 |
Onodera CS, Underwood JG, Katzman S, Jacobs F, Greenberg D, Salama SR, Haussler D. Gene isoform specificity through enhancer-associated antisense transcription. Plos One. 7: e43511. PMID 22937057 DOI: 10.1371/Journal.Pone.0043511 |
0.406 |
|
| 2010 |
Underwood JG, Uzilov AV, Katzman S, Onodera CS, Mainzer JE, Mathews DH, Lowe TM, Salama SR, Haussler D. FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing. Nature Methods. 7: 995-1001. PMID 21057495 DOI: 10.1038/Nmeth.1529 |
0.315 |
|
| 2006 |
Auweter SD, Fasan R, Reymond L, Underwood JG, Black DL, Pitsch S, Allain FH. Molecular basis of RNA recognition by the human alternative splicing factor Fox-1. The Embo Journal. 25: 163-73. PMID 16362037 DOI: 10.1038/Sj.Emboj.7600918 |
0.581 |
|
| 2005 |
Underwood JG, Boutz PL, Dougherty JD, Stoilov P, Black DL. Homologues of the Caenorhabditis elegans Fox-1 protein are neuronal splicing regulators in mammals. Molecular and Cellular Biology. 25: 10005-16. PMID 16260614 DOI: 10.1128/Mcb.25.22.10005-10016.2005 |
0.627 |
|
| 2001 |
Rooke N, Underwood J. In vitro RNA splicing in mammalian cell extracts. Current Protocols in Cell Biology / Editorial Board, Juan S. Bonifacino ... [Et Al.]. Unit 11.17. PMID 18228306 DOI: 10.1002/0471143030.Cb1117S18 |
0.492 |
|
| 2000 |
Chou MY, Underwood JG, Nikolic J, Luu MH, Black DL. Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing. Molecular Cell. 5: 949-57. PMID 10911989 DOI: 10.1016/S1097-2765(00)80260-9 |
0.59 |
|
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