Wenyuan Shi - Publications

Affiliations: 
University of California, Los Angeles, Los Angeles, CA 
Area:
Dentistry, Public Health, Microbiology Biology

218 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Liu A, Liu F, Shi W, Huang H, Wang G, Ye H. C-type allatostatin and its putative receptor from the mud crab serve an inhibitory role in ovarian development. The Journal of Experimental Biology. PMID 31558587 DOI: 10.1242/jeb.207985  0.6
2019 Chen Y, Agnello M, Dinis M, Chien KC, Wang J, Hu W, Shi W, He X, Zou J. Lollipop containing Glycyrrhiza uralensis extract reduces Streptococcus mutans colonization and maintains oral microbial diversity in Chinese preschool children. Plos One. 14: e0221756. PMID 31442287 DOI: 10.1371/journal.pone.0221756  0.8
2019 Li Y, Wang K, Zhang B, Tu Q, Yao Y, Cui B, Ren B, He J, Shen X, Van Nostrand JD, Zhou J, Shi W, Xiao L, Lu C, Zhou X. Salivary mycobiome dysbiosis and its potential impact on bacteriome shifts and host immunity in oral lichen planus. International Journal of Oral Science. 11: 13. PMID 31263096 DOI: 10.1038/s41368-019-0045-2  1
2019 Baker JL, Hendrickson EL, Tang X, Lux R, He X, Edlund A, McLean JS, Shi W. and emerge as lone survivors following long-term starvation of oral microbiota. Proceedings of the National Academy of Sciences of the United States of America. PMID 30975748 DOI: 10.1073/pnas.1820594116  0.64
2019 Yang G, Wang J, Lu S, Chen Z, Fan S, Chen D, Xue H, Shi W, He J. Short lipopeptides specifically inhibit the growth of Propionibacterium acnes with antibacterial and anti-inflammatory dual action. British Journal of Pharmacology. PMID 30927447 DOI: 10.1111/bph.14680  0.76
2019 Ishijima M, Dorigatti de Avila E, Nakhaei K, Shi W, Lux R, Ogawa T. Ultraviolet Light Treatment of Titanium Suppresses Human Oral Bacterial Attachment and Biofilm Formation: A Short-Term In Vitro Study. The International Journal of Oral & Maxillofacial Implants. PMID 30807627 DOI: 10.11607/jomi.7444  0.64
2019 Yang G, Wang J, Lu S, Chen Z, Fan S, Chen D, Xue H, Shi W, He J. Short lipopeptides specifically inhibit the growth of Propionibacterium acnes with antibacterial and anti-inflammatory dual action. British Journal of Pharmacology. PMID 30644534 DOI: 10.1111/bph.14571  0.76
2018 Edlund A, Yang Y, Yooseph S, He X, Shi W, McLean JS. Uncovering complex microbiome activities via metatranscriptomics during 24 hours of oral biofilm assembly and maturation. Microbiome. 6: 217. PMID 30522530 DOI: 10.1186/s40168-018-0591-4  0.6
2018 Bor B, McLean JS, Foster KR, Cen L, To TT, Serrato-Guillen A, Dewhirst FE, Shi W, He X. Rapid evolution of decreased host susceptibility drives a stable relationship between ultrasmall parasite TM7x and its bacterial host. Proceedings of the National Academy of Sciences of the United States of America. PMID 30442671 DOI: 10.1073/pnas.1810625115  0.6
2018 Bedree JK, Bor B, Cen L, Edlund A, Lux R, McLean JS, Shi W, He X. Quorum Sensing Modulates the Epibiotic-Parasitic Relationship Between and Its Saccharibacteria epibiont, a Strain, TM7x. Frontiers in Microbiology. 9: 2049. PMID 30319555 DOI: 10.3389/fmicb.2018.02049  0.64
2018 Shen M, Yang Y, Shen W, Cen L, McLean JS, Shi W, Le S, He X. A linear plasmid-like prophage of Promotes Biofilm Assembly. Applied and Environmental Microbiology. PMID 29915115 DOI: 10.1128/AEM.01263-18  0.6
2018 Shi W, Zhao L, Li S, Xu G, Zeng Y. Serological diagnosis of Mycoplasma pneumoniae infection by using the mimic epitopes. World Journal of Microbiology & Biotechnology. 34: 82. PMID 29845357 DOI: 10.1007/s11274-018-2467-y  0.64
2018 Liu H, Yang D, Ma T, Shi W, Zhu Q, Kang J, Wang N. Measurement and Associations of the Optic Nerve Subarachnoid Space in Normal Tension Glaucoma and Primary Open-Angle Glaucoma. American Journal of Ophthalmology. PMID 29625699 DOI: 10.1016/j.ajo.2018.03.023  0.52
2018 Shen M, Zhang H, Shen W, Zou Z, Lu S, Li G, He X, Agnello M, Shi W, Hu F, Le S. Pseudomonas aeruginosa MutL promotes large chromosomal deletions through non-homologous end joining to prevent bacteriophage predation. Nucleic Acids Research. PMID 29514250 DOI: 10.1093/nar/gky160  0.76
2018 Yang Y, Reipa V, Liu G, Meng Y, Wang X, Mineart KP, Prabhu VM, Shi W, Lin NJ, He X, Sun J. pH-sensitive Compounds for Selective Inhibition of Acid-producing Bacteria. Acs Applied Materials & Interfaces. PMID 29436821 DOI: 10.1021/acsami.8b01089  1
2018 Liang K, Xiao S, Liu H, Shi W, Li J, Gao Y, He L, Zhou X, Li J. 8DSS peptide induced effective dentinal tubule occlusion in vitro. Dental Materials : Official Publication of the Academy of Dental Materials. PMID 29395469 DOI: 10.1016/j.dental.2018.01.006  0.52
2017 Liu H, Yang D, Ma T, Shi W, Qiang Z, Kang J, Wang N. Measurement and Associations of the Optic Nerve Subarachnoid Space in Normal Tension and Primary Open Angle Glaucoma. American Journal of Ophthalmology. PMID 29246580 DOI: 10.1016/j.ajo.2017.11.024  0.52
2017 Wang C, Wang Y, Zheng Y, Zhang K, Hu W, Shi W, Li Y. [Biofilm formation dominated by sophisticated social behaviors in Myxococcus xanthus]. Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology. 33: 1582-1595. PMID 28956403 DOI: 10.13345/j.cjb.170201  1
2017 Edlund A, Garg N, Mohimani H, Gurevich A, He X, Shi W, Dorrestein PC, McLean JS. Metabolic Fingerprints from the Human Oral Microbiome Reveal a Vast Knowledge Gap of Secreted Small Peptidic Molecules. Msystems. 2. PMID 28761934 DOI: 10.1128/mSystems.00058-17  0.6
2017 de Avila ED, Vergani CE, Mollo Junior FA, Junior MJ, Shi W, Lux R. Effect of titanium and zirconia dental implant abutments on a cultivable polymicrobial saliva community. The Journal of Prosthetic Dentistry. PMID 28343672 DOI: 10.1016/j.prosdent.2017.01.010  0.64
2017 Lima BP, Shi W, Lux R. Identification and characterization of a novel Fusobacterium nucleatum adhesin involved in physical interaction and biofilm formation with Streptococcus gordonii. Microbiologyopen. PMID 28173636 DOI: 10.1002/mbo3.444  0.64
2017 Baker JL, Bor B, Agnello M, Shi W, He X. Ecology of the Oral Microbiome: Beyond Bacteria. Trends in Microbiology. PMID 28089325 DOI: 10.1016/j.tim.2016.12.012  0.6
2016 Shi B, Wu T, McLean J, Edlund A, Young Y, He X, Lv H, Zhou X, Shi W, Li H, Lux R. The Denture-Associated Oral Microbiome in Health and Stomatitis. Msphere. 1. PMID 28066812 DOI: 10.1128/mSphere.00215-16  0.64
2016 Guo L, Shokeen B, He X, Shi W, Lux R. Streptococcus mutans SpaP Binds to RadD of Fusobacterium nucleatum ssp polymorphum. Molecular Oral Microbiology. PMID 27976528 DOI: 10.1111/omi.12177  0.64
2016 Li Y, Cui SX, Sun SY, Shi WN, Song ZY, Wang SQ, Yu XF, Gao ZH, Qu XJ. Chemoprevention of intestinal tumorigenesis by the natural dietary flavonoid myricetin in APCMin/+ mice. Oncotarget. PMID 27507058 DOI: 10.18632/oncotarget.11108  1
2016 Wang M, Carver JJ, Phelan VV, Sanchez LM, Garg N, Peng Y, Nguyen DD, Watrous J, Kapono CA, Luzzatto-Knaan T, Porto C, Bouslimani A, Melnik AV, Meehan MJ, Liu WT, ... ... Shi W, et al. Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking. Nature Biotechnology. 34: 828-837. PMID 27504778 DOI: 10.1038/nbt.3597  0.48
2016 Cui G, Liu D, Li W, Li Y, Liang Y, Shi W, Zhao S. miR-194 inhibits proliferation and invasion and promotes apoptosis by targeting KDM5B in esophageal squamous cell carcinoma cells. Experimental Biology and Medicine (Maywood, N.J.). PMID 27480251 DOI: 10.1177/1535370216662712  1
2016 Xue Z, Li Y, Zhang L, Shi W, Zhang C, Feng M, Zhang F, Tang D, Yu H, Gu M, Cheng Z. OsMTOPVIB promotes meiotic DNA double-strand break formation in rice. Molecular Plant. PMID 27456761 DOI: 10.1016/j.molp.2016.07.005  1
2016 Bi Y, Liu H, Xiong C, Di Liu, Shi W, Li M, Liu S, Chen J, Chen G, Li Y, Yang G, Lei Y, Xiong Y, Lei F, Wang H, et al. Novel avian influenza A (H5N6) viruses isolated in migratory waterfowl before the first human case reported in China, 2014. Scientific Reports. 6: 29888. PMID 27431568 DOI: 10.1038/srep29888  0.72
2016 Feng XM, Zheng WY, Zhang HM, Shi WY, Li Y, Cui BJ, Wang HY. Vaccination with Bivalent DNA Vaccine of α1-Giardin and CWP2 Delivered by Attenuated Salmonella typhimurium Reduces Trophozoites and Cysts in the Feces of Mice Infected with Giardia lamblia. Plos One. 11: e0157872. PMID 27332547 DOI: 10.1371/journal.pone.0157872  0.48
2016 Zeng X, Chen P, Liu L, Deng G, Li Y, Shi J, Kong H, Feng H, Bai J, Li X, Shi W, Tian G, Chen H. Protective Efficacy of an H5N1 Inactivated Vaccine Against Challenge with Lethal H5N1, H5N2, H5N6, and H5N8 Influenza Viruses in Chickens. Avian Diseases. 60: 253-255. PMID 27309064 DOI: 10.1637/11179-052015-ResNoteR  1
2016 Bor B, Cen L, Agnello M, Shi W, He X. Morphological and physiological changes induced by contact-dependent interaction between Candida albicans and Fusobacterium nucleatum. Scientific Reports. 6: 27956. PMID 27295972 DOI: 10.1038/srep27956  0.6
2016 Li Y, Kronzucker HJ, Shi W. Microprofiling of nitrogen patches in paddy soil: Analysis of spatiotemporal nutrient heterogeneity at the microscale. Scientific Reports. 6: 27064. PMID 27265522 DOI: 10.1038/srep27064  1
2016 Pan Z, Yang G, He H, Zhao G, Yuan T, Li Y, Shi W, Gao P, Dong L, Li Y. Concurrent radiotherapy and intrathecal methotrexate for treating leptomeningeal metastasis from solid tumors with adverse prognostic factors: A prospective and single-arm study. International Journal of Cancer. PMID 27243238 DOI: 10.1002/ijc.30214  0.6
2016 Zhang J, Liu C, Shi W, Yang L, Zhang Q, Cui J, Fang Y, Li Y, Ren G, Yang S, Xiang R. The novel VEGF receptor 2 inhibitor YLL545 inhibits angiogenesis and growth in breast cancer. Oncotarget. PMID 27203384 DOI: 10.18632/oncotarget.9392  1
2016 Deriu E, Boxx GM, He X, Pan C, Benavidez SD, Cen L, Rozengurt N, Shi W, Cheng G. Influenza Virus Affects Intestinal Microbiota and Secondary Salmonella Infection in the Gut through Type I Interferons. Plos Pathogens. 12: e1005572. PMID 27149619 DOI: 10.1371/journal.ppat.1005572  0.6
2016 Edlund A, Liu Q, Watling M, To TT, Bumgarner RE, He X, Shi W, McLean JS. High-Quality Draft Genome Sequence of Low-pH-Active Veillonella parvula Strain SHI-1, Isolated from Human Saliva within an In Vitro Oral Biofilm Model. Genome Announcements. 4. PMID 26893419 DOI: 10.1128/genomeA.01684-15  0.6
2016 Huo L, Shi W, Chong L, Wang J, Zhang K, Li Y. Asiatic acid inhibits left ventricular remodeling and improves cardiac function in a rat model of myocardial infarction. Experimental and Therapeutic Medicine. 11: 57-64. PMID 26889217 DOI: 10.3892/etm.2015.2871  1
2016 McLean JS, Liu Q, Bor B, Bedree JK, Cen L, Watling M, To TT, Bumgarner RE, He X, Shi W. Draft Genome Sequence of Actinomyces odontolyticus subsp. actinosynbacter Strain XH001, the Basibiont of an Oral TM7 Epibiont. Genome Announcements. 4. PMID 26847892 DOI: 10.1128/genomeA.01685-15  0.6
2016 Yang Y, Lv X, Shi W, Zhou X, Li J, Zhang L. Synergistic Inhibition of Enamel Demineralization by Peptide 8DSS and Fluoride. Caries Research. 50: 32-39. PMID 26836439 DOI: 10.1159/000442896  0.52
2016 Hu W, Gibiansky ML, Wang J, Wang C, Lux R, Li Y, Wong GC, Shi W. Interplay between type IV pili activity and exopolysaccharides secretion controls motility patterns in single cells of Myxococcus xanthus. Scientific Reports. 6: 17790. PMID 26821939 DOI: 10.1038/srep17790  0.64
2016 Yu X, Shi W, Cheng L, Wang Y, Chen D, Hu X, Xu J, Xu L, Wu Y, Qu J, Gu F. Identification of a rhodopsin gene mutation in a large family with autosomal dominant retinitis pigmentosa. Scientific Reports. 6: 19759. PMID 26794436 DOI: 10.1038/srep19759  0.44
2015 Yan Y, Shi W, Jiang H, Xiong J, Zhang W, Li Y. Characteristics of the Energetic Igniters Through Integrating Al/NiO Nanolaminates on Cr Film Bridge. Nanoscale Research Letters. 10: 504. PMID 26718851 DOI: 10.1186/s11671-015-1204-9  1
2015 Dong X, Zhao P, Xu B, Fan J, Meng F, Sun P, Ju S, Li Y, Chang S, Shi W, Cui Z. Avian leukosis virus in indigenous chicken breeds, China. Emerging Microbes & Infections. 4: e76. PMID 26714782 DOI: 10.1038/emi.2015.76  1
2015 Yu X, Luo A, Liu Y, Wang S, Li Y, Shi W, Liu Z, Qu X. MiR-214 increases the sensitivity of breast cancer cells to tamoxifen and fulvestrant through inhibition of autophagy. Molecular Cancer. 14: 208. PMID 26666173 DOI: 10.1186/s12943-015-0480-4  0.6
2015 Sun S, Zhang G, Sun Q, Wu Z, Shi W, Yang B, Li Y. Insulin-induced gene 2 expression correlates with colorectal cancer metastasis and disease outcome. Iubmb Life. PMID 26662938 DOI: 10.1002/iub.1461  0.6
2015 Guo L, McLean JS, Lux R, He X, Shi W. The well-coordinated linkage between acidogenicity and aciduricity via insoluble glucans on the surface of Streptococcus mutans. Scientific Reports. 5: 18015. PMID 26657939 DOI: 10.1038/srep18015  0.64
2015 Bor B, Poweleit N, Bois JS, Cen L, Bedree JK, Zhou ZH, Gunsalus RP, Lux R, McLean JS, He X, Shi W. Phenotypic and Physiological Characterization of the Epibiotic Interaction Between TM7x and Its Basibiont Actinomyces. Microbial Ecology. PMID 26597961 DOI: 10.1007/s00248-015-0711-7  0.64
2015 Shi W, Li Y, Gao X, Fu R. Improvement of the respiration efficiency of Lactococcus lactis by decreasing the culture pH. Biotechnology Letters. PMID 26585330 DOI: 10.1007/s10529-015-1999-6  0.48
2015 Cui Z, Ling Z, Pan L, Song H, Chen X, Shi W, Liu Z, Wang Q, Zhang Z, Li Y, Wang X, Qing Y, Xu X, Mao Z, Xu B, et al. Optic radiation mapping reduces the risk of visual field deficits in anterior temporal lobe resection. International Journal of Clinical and Experimental Medicine. 8: 14283-95. PMID 26550412  1
2015 Lee DK, Kim SV, Limansubroto AN, Yen A, Soundia A, Wang CY, Shi W, Hong C, Tetradis S, Kim Y, Park NH, Kang MK, Ho D. Nanodiamond-Gutta Percha Composite Biomaterials for Root Canal Therapy. Acs Nano. PMID 26452304 DOI: 10.1021/acsnano.5b05718  0.48
2015 Shi W, Ma C, Qi Q, Liu L, Bi H, Cong B, Li Y. The effect of different durations of morphine exposure on mesencephalic dopaminergic neurons in morphine dependent rats. Neurotoxicology. PMID 26386147 DOI: 10.1016/j.neuro.2015.09.005  0.52
2015 Dang J, Jing L, Shi W, Qin P, Li Y, Diao A. Expression and purification of active recombinant human bone morphogenetic 7-2 dimer fusion protein. Protein Expression and Purification. PMID 26276472 DOI: 10.1016/j.pep.2015.08.010  0.48
2015 Bi Y, Zhang Z, Liu W, Yin Y, Hong J, Li X, Wang H, Wong G, Chen J, Li Y, Ru W, Gao R, Liu D, Liu Y, Zhou B, ... ... Shi W, et al. Highly Pathogenic Avian Influenza A(H5N1) Virus Struck Migratory Birds in China in 2015. Scientific Reports. 5: 12986. PMID 26259704 DOI: 10.1038/srep12986  0.72
2015 de Avila ED, Lima BP, Sekiya T, Torii Y, Ogawa T, Shi W, Lux R. Effect of UV-photofunctionalization on oral bacterial attachment and biofilm formation to titanium implant material. Biomaterials. 67: 84-92. PMID 26210175 DOI: 10.1016/j.biomaterials.2015.07.030  0.64
2015 Tian P, Shi W, Liu J, Wang J, Ma C, Qi Q, Cong B, Li Y. Expression of the μ, κ, and δ-opioid receptors and tyrosine hydroxylase in MN9D cells. International Journal of Clinical and Experimental Pathology. 8: 4863-8. PMID 26191179  0.52
2015 Avila ÉD, Molon RS, Lima B, Lux R, Shi W, Jafelicci Junior M, Spolidório D, Vergani CE, Mollo Junior F. The impact of physical chemical characteristics of implant abutment surfaces on bacteria adhesion. The Journal of Oral Implantology. PMID 26103005 DOI: 10.1563/aaid-joi-D-14-00318  0.64
2015 Guo L, McLean JS, Yang Y, Eckert R, Kaplan CW, Kyme P, Sheikh O, Varnum B, Lux R, Shi W, He X. Precision-guided antimicrobial peptide as a targeted modulator of human microbial ecology. Proceedings of the National Academy of Sciences of the United States of America. 112: 7569-74. PMID 26034276 DOI: 10.1073/pnas.1506207112  0.64
2015 Edlund A, Yang Y, Yooseph S, Hall AP, Nguyen DD, Dorrestein PC, Nelson KE, He X, Lux R, Shi W, McLean JS. Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism. The Isme Journal. PMID 26023872 DOI: 10.1038/ismej.2015.72  0.64
2015 Chen W, Rosser EW, Zhang D, Shi W, Li Y, Dong WJ, Ma H, Hu D, Xian M. A specific nucleophilic ring-opening reaction of aziridines as a unique platform for the construction of hydrogen polysulfides sensors. Organic Letters. 17: 2776-9. PMID 25961957 DOI: 10.1021/acs.orglett.5b01194  0.4
2015 Zhuang A, Li Y, Lin M, Shi W, Fan X. Ethmoid osteoma as a culprit of orbital emphysema: a case report. Medicine. 94: e724. PMID 25950683 DOI: 10.1097/MD.0000000000000724  1
2015 Wu T, He X, Lu H, Bradshaw DJ, Axe A, Loewy Z, Liu H, Shi W, Lux R. Development of In Vitro Denture Biofilm Models for Halitosis Related Bacteria and their Application in Testing the Efficacy of Antimicrobial Agents. The Open Dentistry Journal. 9: 125-31. PMID 25926895 DOI: 10.2174/1874210601509010125  0.64
2015 Pan Z, Yang G, Wang Y, He H, Pang X, Gao Y, Shi W, Li Y, Dong L, Song Y. Thinprep plus Papanicolaou stain method is more sensitive than cytospin-coupled Wright Giems stain method in cerebrospinal fluid cytology for diagnosis of leptomeningeal metastasis from solid tumors. Plos One. 10: e0122016. PMID 25850010 DOI: 10.1371/journal.pone.0122016  1
2015 Li J, Qi L, Guo Y, Yue L, Li Y, Ge W, Wu J, Shi W, Dong X. Global mapping transcriptional start sites revealed both transcriptional and post-transcriptional regulation of cold adaptation in the methanogenic archaeon Methanolobus psychrophilus. Scientific Reports. 5: 9209. PMID 25784521 DOI: 10.1038/srep09209  0.44
2015 Zhang L, Li Y, Gu Z, Wang Y, Shi M, Ji Y, Sun J, Xu X, Zhang L, Jiang J, Shi W. Resveratrol inhibits enterovirus 71 replication and pro-inflammatory cytokine secretion in rhabdosarcoma cells through blocking IKKs/NF-κB signaling pathway. Plos One. 10: e0116879. PMID 25692777 DOI: 10.1371/journal.pone.0116879  1
2015 Wu Z, Ji J, Tang D, Wang H, Shen Y, Shi W, Li Y, Tan X, Cheng Z, Luo Q. OsSDS is essential for DSB formation in rice meiosis. Frontiers in Plant Science. 6: 21. PMID 25691887 DOI: 10.3389/fpls.2015.00021  1
2015 He X, McLean JS, Edlund A, Yooseph S, Hall AP, Liu SY, Dorrestein PC, Esquenazi E, Hunter RC, Cheng G, Nelson KE, Lux R, Shi W. Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle. Proceedings of the National Academy of Sciences of the United States of America. 112: 244-9. PMID 25535390 DOI: 10.1073/pnas.1419038112  0.64
2015 Pan H, Zhang J, Kuang D, Yang X, Ju W, Huang Z, Guo J, Li Y, Zhang P, Shi W, Jin H, Shi X, Xu X, Meng J. Molecular analysis and antimicrobial susceptibility of enterotoxigenic Escherichia coli from diarrheal patients. Diagnostic Microbiology and Infectious Disease. 81: 126-31. PMID 25533613 DOI: 10.1016/j.diagmicrobio.2014.10.008  0.44
2015 Irwansyah I, Li YQ, Shi W, Qi D, Leow WR, Tang MB, Li S, Chen X. Gram-positive antimicrobial activity of amino acid-based hydrogels. Advanced Materials (Deerfield Beach, Fla.). 27: 648-54. PMID 25447243 DOI: 10.1002/adma.201403339  0.64
2015 Liu Z, Zhang H, Liu Z, Xing C, Fu P, Ni Z, Chen J, Lin H, Liu F, He Y, He Y, Miao L, Chen N, Li Y, Gu Y, ... Shi W, et al. Multitarget therapy for induction treatment of lupus nephritis: a randomized trial. Annals of Internal Medicine. 162: 18-26. PMID 25383558 DOI: 10.7326/M14-1030  1
2015 Yang J, Chen L, Shi WL, Liu LZ, Li Y, Meng XZ. Mercury distribution in sediment along urban-rural gradient around Shanghai (China): implication for pollution history. Environmental Science and Pollution Research International. 22: 1697-704. PMID 25266058 DOI: 10.1007/s11356-014-3611-3  1
2015 Xu X, He J, Xue J, Wang Y, Li K, Zhang K, Guo Q, Liu X, Zhou Y, Cheng L, Li M, Li Y, Li Y, Shi W, Zhou X. Oral cavity contains distinct niches with dynamic microbial communities. Environmental Microbiology. 17: 699-710. PMID 24800728 DOI: 10.1111/1462-2920.12502  0.64
2014 Shi W, Li JC, Yang SD, Li Y, Jin RT, Sun XL, Wang ZZ, Bi YA, Xiao W. [HPLC fingerprint of liuwei dihuang soft capsule]. Zhongguo Zhong Yao Za Zhi = Zhongguo Zhongyao Zazhi = China Journal of Chinese Materia Medica. 39: 4625-8. PMID 25911813  1
2014 Shi W, Hou X, Peng H, Zhang L, Li Y, Gu Z, Jiang Q, Shi M, Ji Y, Jiang J. MEK/ERK signaling pathway is required for enterovirus 71 replication in immature dendritic cells. Virology Journal. 11: 227. PMID 25548009 DOI: 10.1186/s12985-014-0227-7  1
2014 Sun S, Zhang G, Wu Z, Shi W, Yang B, Li Y. MicroRNA-302a functions as a putative tumor suppressor in colon cancer by targeting Akt. Plos One. 9: e115980. PMID 25542007 DOI: 10.1371/journal.pone.0115980  1
2014 Zhang L, Shi W, Song L, Zhang X, Cheng L, Wang Y, Ge X, Li W, Zhang W, Min Q, Jin ZB, Qu J, Gu F. A recurrent deletion mutation in OPA1 causes autosomal dominant optic atrophy in a Chinese family. Scientific Reports. 4: 6936. PMID 25374051 DOI: 10.1038/srep06936  0.44
2014 Li Y, Shi W, Wang X. New insights into how increases in fertility improve the growth of rice at the seedling stage in red soil regions of subtropical China. Plos One. 9: e109161. PMID 25291182 DOI: 10.1371/journal.pone.0109161  1
2014 Chen H, Wang S, Zhang J, Ren X, Zhang R, Shi W, Lv Y, Zhou Y, Yan X, Chen L, He L, Zhang B, Nan X, Yue W, Li Y, et al. A novel molecule Me6TREN promotes angiogenesis via enhancing endothelial progenitor cell mobilization and recruitment. Scientific Reports. 4: 6222. PMID 25164363 DOI: 10.1038/srep06222  0.6
2014 Guo L, He X, Shi W. Intercellular communications in multispecies oral microbial communities. Frontiers in Microbiology. 5: 328. PMID 25071741 DOI: 10.3389/fmicb.2014.00328  0.6
2014 Wang Y, Xue J, Zhou X, You M, Du Q, Yang X, He J, Zou J, Cheng L, Li M, Li Y, Zhu Y, Li J, Shi W, Xu X. Oral microbiota distinguishes acute lymphoblastic leukemia pediatric hosts from healthy populations. Plos One. 9: e102116. PMID 25025462 DOI: 10.1371/journal.pone.0102116  1
2014 Miao YL, Guo WZ, Shi WZ, Fang WW, Liu Y, Liu J, Li BW, Wu W, Li YF. Midazolam ameliorates the behavior deficits of a rat posttraumatic stress disorder model through dual 18 kDa translocator protein and central benzodiazepine receptor and neurosteroidogenesis. Plos One. 9: e101450. PMID 24988461 DOI: 10.1371/journal.pone.0101450  0.6
2014 Peng H, Shi M, Zhang L, Li Y, Sun J, Zhang L, Wang X, Xu X, Zhang X, Mao Y, Ji Y, Jiang J, Shi W. Activation of JNK1/2 and p38 MAPK signaling pathways promotes enterovirus 71 infection in immature dendritic cells. Bmc Microbiology. 14: 147. PMID 24906853 DOI: 10.1186/1471-2180-14-147  1
2014 Le S, Yao X, Lu S, Tan Y, Rao X, Li M, Jin X, Wang J, Zhao Y, Wu NC, Lux R, He X, Shi W, Hu F. Chromosomal DNA deletion confers phage resistance to Pseudomonas aeruginosa. Scientific Reports. 4: 4738. PMID 24770387 DOI: 10.1038/srep04738  0.64
2014 Sharma S, Lavender S, Woo J, Guo L, Shi W, Kilpatrick-Liverman L, Gimzewski JK. Nanoscale characterization of effect of L-arginine on Streptococcus mutans biofilm adhesion by atomic force microscopy. Microbiology (Reading, England). 160: 1466-73. PMID 24763427 DOI: 10.1099/mic.0.075267-0  0.56
2014 Zhang X, Ge X, Shi W, Huang P, Min Q, Li M, Yu X, Wu Y, Zhao G, Tong Y, Jin ZB, Qu J, Gu F. Molecular diagnosis of putative Stargardt disease by capture next generation sequencing. Plos One. 9: e95528. PMID 24763286 DOI: 10.1371/journal.pone.0095528  0.6
2014 Li Y, He J, He Z, Zhou Y, Yuan M, Xu X, Sun F, Liu C, Li J, Xie W, Deng Y, Qin Y, VanNostrand JD, Xiao L, Wu L, ... ... Shi W, et al. Phylogenetic and functional gene structure shifts of the oral microbiomes in periodontitis patients. The Isme Journal. 8: 1879-91. PMID 24671083 DOI: 10.1038/ismej.2014.28  0.64
2014 Kaplan A, Kaplan CW, He X, McHardy I, Shi W, Lux R. Characterization of aid1, a novel gene involved in Fusobacterium nucleatum interspecies interactions. Microbial Ecology. 68: 379-87. PMID 24643713 DOI: 10.1007/s00248-014-0400-y  0.64
2014 Tu Q, He Z, Li Y, Chen Y, Deng Y, Lin L, Hemme CL, Yuan T, Van Nostrand JD, Wu L, Zhou X, Shi W, Li L, Xu J, Zhou J. Development of HuMiChip for functional profiling of human microbiomes. Plos One. 9: e90546. PMID 24595026 DOI: 10.1371/journal.pone.0090546  0.64
2014 Sarkar J, McHardy IH, Simanian EJ, Shi W, Lux R. Transcriptional responses of Treponema denticola to other oral bacterial species. Plos One. 9: e88361. PMID 24505483 DOI: 10.1371/journal.pone.0088361  0.64
2014 He X, McLean JS, Guo L, Lux R, Shi W. The social structure of microbial community involved in colonization resistance. The Isme Journal. 8: 564-74. PMID 24088624 DOI: 10.1038/ismej.2013.172  0.64
2014 Lillehoj PB, Kaplan CW, He J, Shi W, Ho CM. Rapid, electrical impedance detection of bacterial pathogens using immobilized antimicrobial peptides. Journal of Laboratory Automation. 19: 42-9. PMID 23850865 DOI: 10.1177/2211068213495207  0.64
2013 Edlund A, Yang Y, Hall AP, Guo L, Lux R, He X, Nelson KE, Nealson KH, Yooseph S, Shi W, McLean JS. An in vitro biofilm model system maintaining a highly reproducible species and metabolic diversity approaching that of the human oral microbiome. Microbiome. 1: 25. PMID 24451062 DOI: 10.1186/2049-2618-1-25  0.64
2013 Le S, He X, Tan Y, Huang G, Zhang L, Lux R, Shi W, Hu F. Mapping the tail fiber as the receptor binding protein responsible for differential host specificity of Pseudomonas aeruginosa bacteriophages PaP1 and JG004. Plos One. 8: e68562. PMID 23874674 DOI: 10.1371/journal.pone.0068562  0.64
2013 Pan H, He X, Lux R, Luan J, Shi W. Killing of Escherichia coli by Myxococcus xanthus in aqueous environments requires exopolysaccharide-dependent physical contact. Microbial Ecology. 66: 630-8. PMID 23828520 DOI: 10.1007/s00248-013-0252-x  0.64
2013 Wu T, Hu W, Guo L, Finnegan M, Bradshaw DJ, Webster P, Loewy ZG, Zhou X, Shi W, Lux R. Development of a new model system to study microbial colonization on dentures. Journal of Prosthodontics : Official Journal of the American College of Prosthodontists. 22: 344-50. PMID 23790238 DOI: 10.1111/jopr.12002  0.8
2013 Guo L, Shi W. Salivary biomarkers for caries risk assessment. Journal of the California Dental Association. 41: 107-9, 112-8. PMID 23505756  0.56
2013 Guo L, Hu W, He X, Lux R, McLean J, Shi W. investigating acid production by Streptococcus mutans with a surface-displayed pH-sensitive green fluorescent protein. Plos One. 8: e57182. PMID 23468929 DOI: 10.1371/journal.pone.0057182  0.8
2013 Gibiansky ML, Hu W, Dahmen KA, Shi W, Wong GC. Earthquake-like dynamics in Myxococcus xanthus social motility. Proceedings of the National Academy of Sciences of the United States of America. 110: 2330-5. PMID 23341622 DOI: 10.1073/pnas.1215089110  0.64
2013 Hu W, Lux R, Shi W. Analysis of exopolysaccharides in Myxococcus xanthus using confocal laser scanning microscopy. Methods in Molecular Biology (Clifton, N.J.). 966: 121-31. PMID 23299732 DOI: 10.1007/978-1-62703-245-2_8  0.8
2013 Chen YS, Lee SM, Lin CC, Liu CY, Wu MC, Shi WL. Kinetic study on the tyrosinase and melanin formation inhibitory activities of carthamus yellow isolated from Carthamus tinctorius L. Journal of Bioscience and Bioengineering. 115: 242-5. PMID 23063243 DOI: 10.1016/j.jbiosc.2012.09.013  0.32
2012 Hu W, Li L, Sharma S, Wang J, McHardy I, Lux R, Yang Z, He X, Gimzewski JK, Li Y, Shi W. DNA builds and strengthens the extracellular matrix in Myxococcus xanthus biofilms by interacting with exopolysaccharides. Plos One. 7: e51905. PMID 23300576 DOI: 10.1371/journal.pone.0051905  0.64
2012 Pan H, Luan J, He X, Lux R, Shi W. The clpB gene is involved in the stress response of Myxococcus xanthus during vegetative growth and development. Microbiology (Reading, England). 158: 2336-43. PMID 22790397 DOI: 10.1099/mic.0.060103-0  0.64
2012 Hu W, Wang J, McHardy I, Lux R, Yang Z, Li Y, Shi W. Effects of exopolysaccharide production on liquid vegetative growth, stress survival, and stationary phase recovery in Myxococcus xanthus. Journal of Microbiology (Seoul, Korea). 50: 241-8. PMID 22538652 DOI: 10.1007/s12275-012-1349-5  1
2012 McLean JS, Fansler SJ, Majors PD, McAteer K, Allen LZ, Shirtliff ME, Lux R, Shi W. Identifying low pH active and lactate-utilizing taxa within oral microbiome communities from healthy children using stable isotope probing techniques. Plos One. 7: e32219. PMID 22403637 DOI: 10.1371/journal.pone.0032219  0.64
2012 Wang R, Kaplan A, Guo L, Shi W, Zhou X, Lux R, He X. The influence of iron availability on human salivary microbial community composition. Microbial Ecology. 64: 152-61. PMID 22318873 DOI: 10.1007/s00248-012-0013-2  0.64
2012 Zhang G, Zhang F, Ding G, Li J, Guo X, Zhu J, Zhou L, Cai S, Liu X, Luo Y, Zhang G, Shi W, Dong X. Acyl homoserine lactone-based quorum sensing in a methanogenic archaeon. The Isme Journal. 6: 1336-44. PMID 22237544 DOI: 10.1038/ismej.2011.203  0.6
2012 Hung DC, Downey JS, Kreth J, Qi F, Shi W, Cvitkovitch DG, Goodman SD. Oligomerization of the response regulator ComE from Streptococcus mutans is affected by phosphorylation. Journal of Bacteriology. 194: 1127-35. PMID 22210762 DOI: 10.1128/JB.06565-11  0.6
2012 He X, Hu W, Kaplan CW, Guo L, Shi W, Lux R. Adherence to streptococci facilitates Fusobacterium nucleatum integration into an oral microbial community. Microbial Ecology. 63: 532-42. PMID 22202886 DOI: 10.1007/s00248-011-9989-2  0.64
2012 Hu W, Yang Z, Lux R, Zhao M, Wang J, He X, Shi W. Direct visualization of the interaction between pilin and exopolysaccharides of Myxococcus xanthus with eGFP-fused PilA protein. Fems Microbiology Letters. 326: 23-30. PMID 22092602 DOI: 10.1111/j.1574-6968.2011.02430.x  0.8
2012 Shi W. Gelcasting of BeO Applied Mechanics and Materials. 184: 992-1000. DOI: 10.4028/www.scientific.net/AMM.184-185.992  0.6
2012 Shi W. High power monolithic pulsed fiber lasers in nanosecond regime for nonlinear frequency applications 2012 Ieee Photonics Conference, Ipc 2012. 499-500. DOI: 10.1109/IPCon.2012.6358711  0.6
2012 Shi W. A new adaptive equalization aimed at the inter-symbol interference based on new quasi-Newton algorithm Beijing Youdian Daxue Xuebao/Journal of Beijing University of Posts and Telecommunications. 35: 83-86.  0.6
2011 Cao Y, Zhou X, Shi W. [New progress in research of Granulicatella species]. Hua Xi Kou Qiang Yi Xue Za Zhi = Huaxi Kouqiang Yixue Zazhi = West China Journal of Stomatology. 29: 665-9. PMID 22332588  0.52
2011 Huynh T, Kapur RV, Kaplan CW, Cacalano N, Kinder Haake S, Shi W, Sieling P, Jewett A. The role of aggregation in Fusobacterium nucleatum- induced immune cell death. Journal of Endodontics. 37: 1531-5. PMID 22000457 DOI: 10.1016/j.joen.2011.06.034  0.64
2011 Chugal N, Wang JK, Wang R, He X, Kang M, Li J, Zhou X, Shi W, Lux R. Molecular characterization of the microbial flora residing at the apical portion of infected root canals of human teeth. Journal of Endodontics. 37: 1359-64. PMID 21924182 DOI: 10.1016/j.joen.2011.06.020  0.64
2011 Yarbrough DK, Eckert R, He J, Hagerman E, Qi F, Lux R, Wu B, Anderson MH, Shi W. Rapid probing of biological surfaces with a sparse-matrix peptide library. Plos One. 6: e23551. PMID 21858167 DOI: 10.1371/journal.pone.0023551  0.64
2011 Hendrata M, Yang Z, Lux R, Shi W. Experimentally guided computational model discovers important elements for social behavior in myxobacteria. Plos One. 6: e22169. PMID 21811570 DOI: 10.1371/journal.pone.0022169  0.64
2011 Hung DC, Downey JS, Ayala EA, Kreth J, Mair R, Senadheera DB, Qi F, Cvitkovitch DG, Shi W, Goodman SD. Characterization of DNA binding sites of the ComE response regulator from Streptococcus mutans. Journal of Bacteriology. 193: 3642-52. PMID 21602345 DOI: 10.1128/JB.00155-11  0.64
2011 Kaplan CW, Sim JH, Shah KR, Kolesnikova-Kaplan A, Shi W, Eckert R. Selective membrane disruption: mode of action of C16G2, a specifically targeted antimicrobial peptide. Antimicrobial Agents and Chemotherapy. 55: 3446-52. PMID 21518845 DOI: 10.1128/AAC.00342-11  0.64
2011 Yang Z, Hu W, Chen K, Wang J, Lux R, Zhou ZH, Shi W. Alanine 32 in PilA is important for PilA stability and type IV pili function in Myxococcus xanthus. Microbiology (Reading, England). 157: 1920-8. PMID 21493683 DOI: 10.1099/mic.0.049684-0  0.8
2011 Wang J, Hu W, Lux R, He X, Li Y, Shi W. Natural transformation of Myxococcus xanthus. Journal of Bacteriology. 193: 2122-32. PMID 21378184 DOI: 10.1128/JB.00041-11  1
2011 Liang P, Gao Y, Zhang H, Yu X, Wang Y, Duan Y, Shi W. Microwave ablation in the spleen for treatment of secondary hypersplenism: a preliminary study. Ajr. American Journal of Roentgenology. 196: 692-6. PMID 21343515 DOI: 10.2214/AJR.10.4193  0.8
2011 Hu W, Hossain M, Lux R, Wang J, Yang Z, Li Y, Shi W. Exopolysaccharide-independent social motility of Myxococcus xanthus. Plos One. 6: e16102. PMID 21245931 DOI: 10.1371/journal.pone.0016102  1
2011 Shi W, Liang P, Zhu Q, Yu X, Shao Q, Lu T, Wang Y, Dong B. Microwave ablation: results with double 915 MHz antennae in ex vivo bovine livers. European Journal of Radiology. 79: 214-7. PMID 20395095 DOI: 10.1016/j.ejrad.2010.03.015  0.8
2010 McHardy I, Keegan C, Sim JH, Shi W, Lux R. Transcriptional profiles of Treponema denticola in response to environmental conditions. Plos One. 5: e13655. PMID 21048920 DOI: 10.1371/journal.pone.0013655  0.64
2010 Kaplan CW, Ma X, Paranjpe A, Jewett A, Lux R, Kinder-Haake S, Shi W. Fusobacterium nucleatum outer membrane proteins Fap2 and RadD induce cell death in human lymphocytes. Infection and Immunity. 78: 4773-8. PMID 20823215 DOI: 10.1128/IAI.00567-10  0.64
2010 He X, Tian Y, Guo L, Lux R, Zusman DR, Shi W. Oral-derived bacterial flora defends its domain by recognizing and killing intruders--a molecular analysis using Escherichia coli as a model intestinal bacterium. Microbial Ecology. 60: 655-64. PMID 20625713 DOI: 10.1007/s00248-010-9708-4  0.64
2010 He X, Tian Y, Guo L, Ano T, Lux R, Zusman DR, Shi W. In vitro communities derived from oral and gut microbial floras inhibit the growth of bacteria of foreign origins. Microbial Ecology. 60: 665-76. PMID 20625712 DOI: 10.1007/s00248-010-9711-9  0.64
2010 Pan PC, Harper S, Ricci-Nittel D, Lux R, Shi W. In-vitro evidence for efficacy of antimicrobial mouthrinses. Journal of Dentistry. 38: S16-20. PMID 20621239 DOI: 10.1016/S0300-5712(10)70006-3  0.64
2010 Yang Z, Lux R, Hu W, Hu C, Shi W. PilA localization affects extracellular polysaccharide production and fruiting body formation in Myxococcus xanthus. Molecular Microbiology. 76: 1500-13. PMID 20444090 DOI: 10.1111/j.1365-2958.2010.07180.x  0.8
2010 He J, Yarbrough DK, Kreth J, Anderson MH, Shi W, Eckert R. Systematic approach to optimizing specifically targeted antimicrobial peptides against Streptococcus mutans. Antimicrobial Agents and Chemotherapy. 54: 2143-51. PMID 20211885 DOI: 10.1128/AAC.01391-09  0.64
2010 Liu PF, Shi W, Zhu W, Smith JW, Hsieh SL, Gallo RL, Huang CM. Vaccination targeting surface FomA of Fusobacterium nucleatum against bacterial co-aggregation: Implication for treatment of periodontal infection and halitosis. Vaccine. 28: 3496-505. PMID 20189489 DOI: 10.1016/j.vaccine.2010.02.047  0.64
2010 Yarbrough DK, Hagerman E, Eckert R, He J, Choi H, Cao N, Le K, Hedger J, Qi F, Anderson M, Rutherford B, Wu B, Tetradis S, Shi W. Specific binding and mineralization of calcified surfaces by small peptides. Calcified Tissue International. 86: 58-66. PMID 19949943 DOI: 10.1007/s00223-009-9312-0  0.64
2010 Li L, He J, Eckert R, Yarbrough D, Lux R, Anderson M, Shi W. Design and characterization of an acid-activated antimicrobial peptide. Chemical Biology & Drug Design. 75: 127-32. PMID 19878192 DOI: 10.1111/j.1747-0285.2009.00904.x  0.64
2010 Shi W, Shi K. A benefit-cost analytic framework for selection of human resource measures Proceedings - 2010 Ieee 2nd Symposium On Web Society, Sws 2010. 626-631. DOI: 10.1109/SWS.2010.5607374  0.52
2009 Sondej M, Denny PA, Xie Y, Ramachandran P, Si Y, Takashima J, Shi W, Wong DT, Loo JA, Denny PC. Glycoprofiling of the Human Salivary Proteome. Clinical Proteomics. 5: 52-68. PMID 20161393 DOI: 10.1007/s12014-008-9021-0  0.64
2009 Cross SE, Kreth J, Wali RP, Sullivan R, Shi W, Gimzewski JK. Evaluation of bacteria-induced enamel demineralization using optical profilometry. Dental Materials : Official Publication of the Academy of Dental Materials. 25: 1517-26. PMID 19732947 DOI: 10.1016/j.dental.2009.07.012  0.64
2009 Black WP, Xu Q, Cadieux CL, Suh SJ, Shi W, Yang Z. Isolation and characterization of a suppressor mutation that restores Myxococcus xanthus exopolysaccharide production. Microbiology (Reading, England). 155: 3599-610. PMID 19684067 DOI: 10.1099/mic.0.031070-0  0.64
2009 Gu F, Li Y, Zhou C, Wong DT, Ho CM, Qi F, Shi W. [Not Available]. The Open Dentistry Journal. 3: 80-4. PMID 19543549 DOI: 10.2174/1874210600903010080  1
2009 Mu L, Shi W, She G, Chang JC, Lee ST. Fluorescent logic gates chemically attached to silicon nanowires. Angewandte Chemie (International Ed. in English). 48: 3469-72. PMID 19343751 DOI: 10.1002/anie.200805015  0.64
2009 Nguyen T, Zhang Z, Huang IH, Wu C, Merritt J, Shi W, Qi F. Genes involved in the repression of mutacin I production in Streptococcus mutans. Microbiology (Reading, England). 155: 551-6. PMID 19202103 DOI: 10.1099/mic.0.021303-0  0.6
2009 He J, Anderson MH, Shi W, Eckert R. Design and activity of a 'dual-targeted' antimicrobial peptide. International Journal of Antimicrobial Agents. 33: 532-7. PMID 19188046 DOI: 10.1016/j.ijantimicag.2008.11.013  0.64
2009 Palsdottir H, Remis JP, Schaudinn C, O'Toole E, Lux R, Shi W, McDonald KL, Costerton JW, Auer M. Three-dimensional macromolecular organization of cryofixed Myxococcus xanthus biofilms as revealed by electron microscopic tomography. Journal of Bacteriology. 191: 2077-82. PMID 19168614 DOI: 10.1128/JB.01333-08  0.64
2009 Kaplan CW, Lux R, Haake SK, Shi W. The Fusobacterium nucleatum outer membrane protein RadD is an arginine-inhibitable adhesin required for inter-species adherence and the structured architecture of multispecies biofilm. Molecular Microbiology. 71: 35-47. PMID 19007407 DOI: 10.1111/j.1365-2958.2008.06503.x  0.64
2009 Wang Q, Zheng JY, Kreth J, Yan X, Kamata M, Campbell RA, Xie Y, Chiu R, Berenson JR, Shi W, Chen ISY, Pang S. Regulation of Prostate-Specific Antigen Expression by the Junctional Adhesion Molecule A Urology. 73: 1119-1125. PMID 18602143 DOI: 10.1016/j.urology.2008.02.060  0.64
2009 Shi W. Black hole search with tokens in interconnected networks Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5873: 670-682. DOI: 10.1007/978-3-642-05118-0_46  0.6
2008 Hsu CC, Chung HY, Hagerman EM, Shi W, Yang JM, Wu B. Effects on Hardness and Elastic Modulus for DSS-8 Peptide Treatment on Remineralization of Human Dental Tissues. Materials Research Society Symposia Proceedings. Materials Research Society. 1132. PMID 25355990 DOI: 10.1557/PROC-1132-Z09-05  0.36
2008 He X, Wu C, Yarbrough D, Sim L, Niu G, Merritt J, Shi W, Qi F. The cia operon of Streptococcus mutans encodes a unique component required for calcium-mediated autoregulation. Molecular Microbiology. 70: 112-26. PMID 18681938 DOI: 10.1111/j.1365-2958.2008.06390.x  0.6
2008 Tong H, Chen W, Shi W, Qi F, Dong X. SO-LAAO, a novel L-amino acid oxidase that enables Streptococcus oligofermentans to outcompete Streptococcus mutans by generating H2O2 from peptone. Journal of Bacteriology. 190: 4716-21. PMID 18469105 DOI: 10.1128/JB.00363-08  0.6
2008 Mu L, Shi W, Chang JC, Lee ST. Silicon nanowires-based fluorescence sensor for Cu(II). Nano Letters. 8: 104-9. PMID 18095729 DOI: 10.1021/nl072164k  0.64
2007 Kuramitsu HK, He X, Lux R, Anderson MH, Shi W. Interspecies interactions within oral microbial communities. Microbiology and Molecular Biology Reviews : Mmbr. 71: 653-70. PMID 18063722 DOI: 10.1128/MMBR.00024-07  0.64
2007 Eckert R, Mchardy I, Yarbrough DK, He J, Qi F, Anderson MH, Shi W. Stability and activity in sputum of G10KHc, a potent anti-Pseudomonas antimicrobial peptide. Chemical Biology & Drug Design. 70: 456-60. PMID 17927719 DOI: 10.1111/j.1747-0285.2007.00580.x  0.64
2007 Cross SE, Kreth J, Zhu L, Sullivan R, Shi W, Qi F, Gimzewski JK. Nanomechanical properties of glucans and associated cell-surface adhesion of Streptococcus mutans probed by atomic force microscopy under in situ conditions. Microbiology (Reading, England). 153: 3124-32. PMID 17768255 DOI: 10.1099/mic.0.2007/007625-0  0.64
2007 Merritt J, Zheng L, Shi W, Qi F. Genetic characterization of the hdrRM operon: a novel high-cell-density-responsive regulator in Streptococcus mutans. Microbiology (Reading, England). 153: 2765-73. PMID 17660440 DOI: 10.1099/mic.0.2007/007468-0  0.6
2007 Kreth J, Hung DC, Merritt J, Perry J, Zhu L, Goodman SD, Cvitkovitch DG, Shi W, Qi F. The response regulator ComE in Streptococcus mutans functions both as a transcription activator of mutacin production and repressor of CSP biosynthesis. Microbiology (Reading, England). 153: 1799-807. PMID 17526837 DOI: 10.1099/mic.0.2007/005975-0  0.6
2007 Shi W, Lux R. Focal adhesion: getting a grasp on myxobacterial gliding. Nature Chemical Biology. 3: 205-6. PMID 17372604 DOI: 10.1038/nchembio0407-205  0.64
2007 Tong H, Chen W, Merritt J, Qi F, Shi W, Dong X. Streptococcus oligofermentans inhibits Streptococcus mutans through conversion of lactic acid into inhibitory H2O2: a possible counteroffensive strategy for interspecies competition. Molecular Microbiology. 63: 872-80. PMID 17302806 DOI: 10.1111/j.1365-2958.2006.05546.x  0.6
2007 He J, Eckert R, Pharm T, Simanian MD, Hu C, Yarbrough DK, Qi F, Anderson MH, Shi W. Novel synthetic antimicrobial peptides against Streptococcus mutans. Antimicrobial Agents and Chemotherapy. 51: 1351-8. PMID 17296741 DOI: 10.1128/AAC.01270-06  0.64
2007 Zhang X, Zhang X, Shi W, Meng X, Lee C, Lee S. Single-crystal organic microtubes with a rectangular cross section. Angewandte Chemie (International Ed. in English). 46: 1525-8. PMID 17225225 DOI: 10.1002/anie.200604359  0.72
2007 Chalmers NI, Palmer RJ, Du-Thumm L, Sullivan R, Shi W, Kolenbrander PE. Use of quantum dot luminescent probes to achieve single-cell resolution of human oral bacteria in biofilms. Applied and Environmental Microbiology. 73: 630-6. PMID 17114321 DOI: 10.1128/AEM.02164-06  0.64
2007 Chavira M, Cao N, Le K, Riar T, Moradshahi N, McBride M, Lux R, Shi W. Beta-D-Allose inhibits fruiting body formation and sporulation in Myxococcus xanthus. Journal of Bacteriology. 189: 169-78. PMID 17056749 DOI: 10.1128/JB.00792-06  0.64
2006 Cross SE, Kreth J, Zhu L, Qi F, Pelling AE, Shi W, Gimzewski JK. Atomic force microscopy study of the structure-function relationships of the biofilm-forming bacterium Streptococcus mutans. Nanotechnology. 17: S1-7. PMID 21727347 DOI: 10.1088/0957-4484/17/4/001  0.64
2006 Gu F, Qi F, Anderson MH, Shi W. Comparative analysis of a monoclonal antibody-based Streptococcus mutans detection method with selective culture assays using polymerase chain reaction as a gold standard. Hybridoma (2005). 25: 372-7. PMID 17204000 DOI: 10.1089/hyb.2006.25.372  0.64
2006 Tong H, Zhu B, Chen W, Qi F, Shi W, Dong X. Establishing a genetic system for ecological studies of Streptococcus oligofermentans. Fems Microbiology Letters. 264: 213-9. PMID 17064375 DOI: 10.1111/j.1574-6968.2006.00453.x  0.6
2006 Eckert R, He J, Yarbrough DK, Qi F, Anderson MH, Shi W. Targeted killing of Streptococcus mutans by a pheromone-guided "smart" antimicrobial peptide. Antimicrobial Agents and Chemotherapy. 50: 3651-7. PMID 17060534 DOI: 10.1128/AAC.00622-06  0.64
2006 Kreth J, Merritt J, Zhu L, Shi W, Qi F. Cell density- and ComE-dependent expression of a group of mutacin and mutacin-like genes in Streptococcus mutans. Fems Microbiology Letters. 265: 11-7. PMID 16981904 DOI: 10.1111/j.1574-6968.2006.00459.x  0.6
2006 Eckert R, Brady KM, Greenberg EP, Qi F, Yarbrough DK, He J, McHardy I, Anderson MH, Shi W. Enhancement of antimicrobial activity against pseudomonas aeruginosa by coadministration of G10KHc and tobramycin. Antimicrobial Agents and Chemotherapy. 50: 3833-8. PMID 16940063 DOI: 10.1128/AAC.00509-06  0.64
2006 Tsang P, Merritt J, Shi W, Qi F. IrvA-dependent and IrvA-independent pathways for mutacin gene regulation in Streptococcus mutans. Fems Microbiology Letters. 261: 231-4. PMID 16907725 DOI: 10.1111/j.1574-6968.2006.00351.x  0.6
2006 Merritt J, Qi F, Shi W. Milk helps build strong teeth and promotes oral health. Journal of the California Dental Association. 34: 361-6. PMID 16900979  0.6
2006 Massoth D, Massoth G, Massoth IR, Laflamme L, Shi W, Hu C, Gu F. The effect of xylitol on Streptococcus mutans in children. Journal of the California Dental Association. 34: 231-4. PMID 16895079  0.64
2006 Zhu L, Kreth J, Cross SE, Gimzewski JK, Shi W, Qi F. Functional characterization of cell-wall-associated protein WapA in Streptococcus mutans. Microbiology (Reading, England). 152: 2395-404. PMID 16849803 DOI: 10.1099/mic.0.28883-0  0.64
2006 Tsang P, Qi F, Shi W. Medical approach to dental caries: fight the disease, not the lesion. Pediatric Dentistry. 28: 188-91; discussion 1. PMID 16708795  0.64
2006 Tsang PW, Qi F, Huwig AK, Anderson MH, Wesley D, Shi W. A medical approach to the diagnosis and treatment of dental caries. Ahip Coverage. 47: 38-42. PMID 16700451  0.6
2006 Eckert R, Qi F, Yarbrough DK, He J, Anderson MH, Shi W. Adding selectivity to antimicrobial peptides: rational design of a multidomain peptide against Pseudomonas spp. Antimicrobial Agents and Chemotherapy. 50: 1480-8. PMID 16569868 DOI: 10.1128/AAC.50.4.1480-1488.2006  0.64
2006 Fan X, Meng XM, Zhang XH, Shi WS, Zhang WJ, Zapien JA, Lee CS, Lee ST. Dart-shaped tricrystal ZnS nanoribbons. Angewandte Chemie (International Ed. in English). 45: 2568-71. PMID 16544347 DOI: 10.1002/anie.200504069  0.64
2006 He J, Chen L, Heber D, Shi W, Lu QY. Antibacterial compounds from Glycyrrhiza uralensis. Journal of Natural Products. 69: 121-4. PMID 16441081 DOI: 10.1021/np058069d  0.76
2006 Pelling AE, Li Y, Cross SE, Castaneda S, Shi W, Gimzewski JK. Self-organized and highly ordered domain structures within swarms of Myxococcus xanthus. Cell Motility and the Cytoskeleton. 63: 141-8. PMID 16421928 DOI: 10.1002/cm.20112  0.64
2005 Fung A, Yang CY, Freire S, Montemagno C, Brough B, Ho CM, Gu F, Shi W. Fluorescent Detection of Oral Pathogens by a Solid-Phase Immunoassay on PDMS. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 3: 2630-3. PMID 17282778 DOI: 10.1109/IEMBS.2005.1617009  0.64
2005 Zhang X, Zhang X, Shi W, Meng X, Lee C, Lee S. Morphology-controllable synthesis of pyrene nanostructures and its morphology dependence of optical properties. The Journal of Physical Chemistry. B. 109: 18777-80. PMID 16853416 DOI: 10.1021/jp052385j  0.72
2005 Nguyen T, Tsang P, Shi W, Qi F. Dental caries and chemical warfare within the mouth. Journal of the California Dental Association. 33: 947-50. PMID 16454237  0.64
2005 Tsang P, Merritt J, Nguyen T, Shi W, Qi F. Identification of genes associated with mutacin I production in Streptococcus mutans using random insertional mutagenesis. Microbiology (Reading, England). 151: 3947-55. PMID 16339939 DOI: 10.1099/mic.0.28221-0  0.6
2005 Kreth J, Merritt J, Shi W, Qi F. Competition and coexistence between Streptococcus mutans and Streptococcus sanguinis in the dental biofilm. Journal of Bacteriology. 187: 7193-203. PMID 16237003 DOI: 10.1128/JB.187.21.7193-7203.2005  0.6
2005 Wang H, Zhang X, Meng X, Zhou S, Wu S, Shi W, Lee S. Bulk preparation of Si-SiOx hierarchical structures: high-density radially oriented amorphous silica nanowires on a single-crystal silicon nanocore. Angewandte Chemie (International Ed. in English). 44: 6934-7. PMID 16215977 DOI: 10.1002/anie.200501960  0.72
2005 Lux R, Shi W. A novel bacterial signalling system with a combination of a Ser/Thr kinase cascade and a His/Asp two-component system. Molecular Microbiology. 58: 345-8. PMID 16194223 DOI: 10.1111/j.1365-2958.2005.04856.x  0.64
2005 Yang CY, Brooks E, Li Y, Denny P, Ho CM, Qi F, Shi W, Wolinsky L, Wu B, Wong DT, Montemagno CD. Detection of picomolar levels of interleukin-8 in human saliva by SPR. Lab On a Chip. 5: 1017-23. PMID 16175255 DOI: 10.1039/b504737d  0.64
2005 Qi F, Kreth J, Lévesque CM, Kay O, Mair RW, Shi W, Cvitkovitch DG, Goodman SD. Peptide pheromone induced cell death of Streptococcus mutans. Fems Microbiology Letters. 251: 321-6. PMID 16165324 DOI: 10.1016/j.femsle.2005.08.018  0.64
2005 Zhang X, Ju W, Gu M, Meng X, Shi W, Zhang X, Lee S. A facile route to fabrication of inorganic-small organic molecule cable-like nanocomposite arrays. Chemical Communications (Cambridge, England). 4202-4. PMID 16100603 DOI: 10.1039/b506459g  0.72
2005 Merritt J, Kreth J, Shi W, Qi F. LuxS controls bacteriocin production in Streptococcus mutans through a novel regulatory component. Molecular Microbiology. 57: 960-9. PMID 16091037 DOI: 10.1111/j.1365-2958.2005.04733.x  0.6
2005 Kaplan CW, Lux R, Huynh T, Jewett A, Shi W, Haake SK. Fusobacterium nucleatum apoptosis-inducing outer membrane protein. Journal of Dental Research. 84: 700-4. PMID 16040725 DOI: 10.1177/154405910508400803  0.64
2005 Chen L, Cheng X, Shi W, Lu Q, Go VL, Heber D, Ma L. Inhibition of growth of Streptococcus mutans, methicillin-resistant Staphylococcus aureus, and vancomycin-resistant enterococci by kurarinone, a bioactive flavonoid isolated from Sophora flavescens. Journal of Clinical Microbiology. 43: 3574-5. PMID 16000511 DOI: 10.1128/JCM.43.7.3574-3575.2005  0.56
2005 Kreth J, Merritt J, Shi W, Qi F. Co-ordinated bacteriocin production and competence development: a possible mechanism for taking up DNA from neighbouring species. Molecular Microbiology. 57: 392-404. PMID 15978073 DOI: 10.1111/j.1365-2958.2005.04695.x  0.6
2005 Sim JH, Shi W, Lux R. Protein-protein interactions in the chemotaxis signalling pathway of Treponema denticola. Microbiology (Reading, England). 151: 1801-7. PMID 15941989 DOI: 10.1099/mic.0.27622-0  0.64
2005 Gu F, Lux R, Du-Thumm L, Stokes I, Kreth J, Anderson MH, Wong DT, Wolinsky L, Sullivan R, Shi W. In situ and non-invasive detection of specific bacterial species in oral biofilms using fluorescently labeled monoclonal antibodies. Journal of Microbiological Methods. 62: 145-60. PMID 15935497 DOI: 10.1016/j.mimet.2005.02.013  0.64
2005 Lancero HL, Castaneda S, Caberoy NB, Ma X, Garza AG, Shi W. Analysing protein-protein interactions of the Myxococcus xanthus Dif signalling pathway using the yeast two-hybrid system. Microbiology (Reading, England). 151: 1535-41. PMID 15870463 DOI: 10.1099/mic.0.27743-0  0.64
2005 Pelling AE, Li Y, Shi W, Gimzewski JK. Nanoscale visualization and characterization of Myxococcus xanthus cells with atomic force microscopy. Proceedings of the National Academy of Sciences of the United States of America. 102: 6484-9. PMID 15840722 DOI: 10.1073/pnas.0501207102  0.64
2005 Merritt J, Kreth J, Qi F, Sullivan R, Shi W. Non-disruptive, real-time analyses of the metabolic status and viability of Streptococcus mutans cells in response to antimicrobial treatments. Journal of Microbiological Methods. 61: 161-70. PMID 15722141 DOI: 10.1016/j.mimet.2004.11.012  0.6
2005 Li Y, Bustamante VH, Lux R, Zusman D, Shi W. Divergent regulatory pathways control A and S motility in Myxococcus xanthus through FrzE, a CheA-CheY fusion protein. Journal of Bacteriology. 187: 1716-23. PMID 15716443 DOI: 10.1128/JB.187.5.1716-1723.2005  1
2005 Li Y, Lux R, Pelling AE, Gimzewski JK, Shi W. Analysis of type IV pilus and its associated motility in Myxococcus xanthus using an antibody reactive with native pilin and pili. Microbiology (Reading, England). 151: 353-60. PMID 15699186 DOI: 10.1099/mic.0.27614-0  0.64
2005 Merritt J, Qi F, Shi W. A unique nine-gene comY operon in Streptococcus mutans. Microbiology (Reading, England). 151: 157-66. PMID 15632435 DOI: 10.1099/mic.0.27554-0  0.6
2005 Lu A, Cho K, Black WP, Duan XY, Lux R, Yang Z, Kaplan HB, Zusman DR, Shi W. Exopolysaccharide biosynthesis genes required for social motility in Myxococcus xanthus. Molecular Microbiology. 55: 206-20. PMID 15612929 DOI: 10.1111/j.1365-2958.2004.04369.x  0.64
2004 Lancero H, Caberoy NB, Castaneda S, Li Y, Lu A, Dutton D, Duan XY, Kaplan HB, Shi W, Garza AG. Characterization of a Myxococcus xanthus mutant that is defective for adventurous motility and social motility. Microbiology (Reading, England). 150: 4085-93. PMID 15583161 DOI: 10.1099/mic.0.27381-0  0.64
2004 St John MA, Li Y, Zhou X, Denny P, Ho CM, Montemagno C, Shi W, Qi F, Wu B, Sinha U, Jordan R, Wolinsky L, Park NH, Liu H, Abemayor E, et al. Interleukin 6 and interleukin 8 as potential biomarkers for oral cavity and oropharyngeal squamous cell carcinoma. Archives of Otolaryngology--Head & Neck Surgery. 130: 929-35. PMID 15313862 DOI: 10.1001/archotol.130.8.929  0.64
2004 Lux R, Shi W. Chemotaxis-guided movements in bacteria. Critical Reviews in Oral Biology and Medicine : An Official Publication of the American Association of Oral Biologists. 15: 207-20. PMID 15284186  0.64
2004 Qi F, Merritt J, Lux R, Shi W. Inactivation of the ciaH Gene in Streptococcus mutans diminishes mutacin production and competence development, alters sucrose-dependent biofilm formation, and reduces stress tolerance. Infection and Immunity. 72: 4895-9. PMID 15271957 DOI: 10.1128/IAI.72.8.4895-4899.2004  0.64
2004 Li X, Lee SL, Wong SC, Shi W, Thornton I. The study of metal contamination in urban soils of Hong Kong using a GIS-based approach. Environmental Pollution (Barking, Essex : 1987). 129: 113-24. PMID 14749075  0.48
2004 Shi W. High performance chirped fiber Bragg grating by dithering method Proceedings of Spie - the International Society For Optical Engineering. 5279: 607-610. DOI: 10.1117/12.521878  0.6
2004 Zhu W, Shi W. Development of instrument used in luminosity distribution measurement of headlight of vehicle Yi Qi Yi Biao Xue Bao/Chinese Journal of Scientific Instrument. 25: 152.  0.48
2003 Wang Y, Shi W, Chen W, Chen C. Type IV pilus gene homologs pilABCD are required for natural transformation in Actinobacillus actinomycetemcomitans. Gene. 312: 249-55. PMID 12909361  0.8
2003 Li Y, Sun H, Ma X, Lu A, Lux R, Zusman D, Shi W. Extracellular polysaccharides mediate pilus retraction during social motility of Myxococcus xanthus. Proceedings of the National Academy of Sciences of the United States of America. 100: 5443-8. PMID 12704238 DOI: 10.1073/pnas.0836639100  1
2003 Merritt J, Qi F, Goodman SD, Anderson MH, Shi W. Mutation of luxS affects biofilm formation in Streptococcus mutans. Infection and Immunity. 71: 1972-9. PMID 12654815  0.6
2002 Gu F, Ma X, Lux R, Shi W. Production and characterization of species-specific monoclonal antibodies against Actinomyces naeslundii and Lactobacillus casei. Hybridoma and Hybridomics. 21: 469-78. PMID 12573111 DOI: 10.1089/153685902321044007  0.64
2002 Bellenger K, Ma X, Shi W, Yang Z. A CheW homologue is required for Myxococcus xanthus fruiting body development, social gliding motility, and fibril biogenesis Journal of Bacteriology. 184: 5654-5660. PMID 12270823 DOI: 10.1128/JB.184.20.5654-5660.2002  0.64
2002 Gu F, Lux R, Anderson MH, del Aguila MA, Wolinsky L, Hume WR, Shi W. Analyses of Streptococcus mutans in saliva with species-specific monoclonal antibodies. Hybridoma and Hybridomics. 21: 225-32. PMID 12193274 DOI: 10.1089/153685902760213822  0.64
2002 Lux R, Sim JH, Tsai JP, Shi W. Construction and characterization of a cheA mutant of Treponema denticola. Journal of Bacteriology. 184: 3130-4. PMID 12003957 DOI: 10.1128/JB.184.11.3130-3134.2002  0.64
2002 Lancero H, Brofft JE, Downard J, Birren BW, Nusbaum C, Naylor J, Shi W, Shimkets LJ. Mapping of Myxococcus xanthus social motility dsp mutations to the dif genes. Journal of Bacteriology. 184: 1462-5. PMID 11844780  0.64
2002 Shi W, Sun H. Type IV pilus-dependent motility and its possible role in bacterial pathogenesis. Infection and Immunity. 70: 1-4. PMID 11748156  0.56
2001 Shi W, Peng H, Wang N, Li CP, Xu L, Lee CS, Kalish R, Lee ST. Free-standing single crystal silicon nanoribbons. Journal of the American Chemical Society. 123: 11095-6. PMID 11686728  0.64
2001 Higgins RW, Shi W. Intercomparison of the principal modes of interannual and intraseasonal variability of the North American Monsoon System Journal of Climate. 14: 403-417.  0.6
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