Richard B. Pyles - Related publications

University of Texas Medical Branch, Galveston, TX 
Microbiology Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Lew ZZR, Liu J, Ong HH, Tan VJ, Luukkainen A, Ong YK, Thong M, Puan KJ, Chow VTK, Tan KS, Wang Y. Contact-Free Co-Culture Model for the Study of Innate Immune Cell Activation During Respiratory Virus Infection. Journal of Visualized Experiments : Jove. PMID 33720120 DOI: 10.3791/62115   
2021 Hasenkrug KJ, Feldmann F, Myers L, Santiago ML, Guo K, Barrett BS, Mickens KL, Carmody A, Okumura A, Rao D, Collins MM, Messer RJ, Lovaglio J, Shaia C, Rosenke R, et al. Recovery from acute SARS-CoV-2 infection and development of anamnestic immune responses in T cell-depleted rhesus macaques. Biorxiv : the Preprint Server For Biology. PMID 33821272 DOI: 10.1101/2021.04.02.438262   
2021 Flerlage T, Boyd DF, Meliopoulos V, Thomas PG, Schultz-Cherry S. Influenza virus and SARS-CoV-2: pathogenesis and host responses in the respiratory tract. Nature Reviews. Microbiology. PMID 33824495 DOI: 10.1038/s41579-021-00542-7   
2021 Lyu S, Yuan X, Liu L, Zhang H, Yu Z, Hang X, Shi W, Wu Y. Application of a recombinant replicase to localize the hemorrhagic syndrome virus and evaluate its effects on antiviral genes of . Journal of Zhejiang University. Science. B. 22: 295-304. PMID 33835763 DOI: 10.1631/jzus.B2000504   
2021 Junjhon J, Panyasu K, Chaiyaloom S, Saipin K, Somasa P, Sangiambut S, Puttikhunt C, Sriburi R, Keelapang P, Ekchariyawat P, Avirutnan P, Hirunpetcharat C, Sittisombut N. Generation and characterization of luciferase-secreting, single-round infectious DENV-2 reporter for functional antibody assays. Journal of Virological Methods. 291: 114119. PMID 33662412 DOI: 10.1016/j.jviromet.2021.114119   
2021 Xie XT, Yitbarek A, Astill J, Singh S, Khan SU, Sharif S, Poljak Z, Greer AL. Within-host model of respiratory virus shedding and antibody response to H9N2 avian influenza virus vaccination and infection in chickens. Infectious Disease Modelling. 6: 490-502. PMID 33778216 DOI: 10.1016/j.idm.2021.02.005   
2021 Gonçalves A, Maisonnasse P, Donati F, Albert M, Behillil S, Contreras V, Naninck T, Marlin R, Solas C, Pizzorno A, Lemaitre J, Kahlaoui N, Terrier O, Ho Tsong Fang R, Enouf V, et al. SARS-CoV-2 viral dynamics in non-human primates. Plos Computational Biology. 17: e1008785. PMID 33730053 DOI: 10.1371/journal.pcbi.1008785   
2021 Shoji M, Esumi T, Tanaka N, Takeuchi M, Yamaji S, Watanabe M, Takahashi E, Kido H, Yamamoto M, Kuzuhara T. Organic synthesis and anti-influenza A virus activity of cyclobakuchiols A, B, C, and D. Plos One. 16: e0248960. PMID 33770117 DOI: 10.1371/journal.pone.0248960   
2021 Barman TK, Racine R, Bonin JL, Califano D, Salmon SL, Metzger DW. Sequential targeting of interferon pathways for increased host resistance to bacterial superinfection during influenza. Plos Pathogens. 17: e1009405. PMID 33690728 DOI: 10.1371/journal.ppat.1009405   
2021 Mirzaei R, Attar A, Papizadeh S, Jeda AS, Hosseini-Fard SR, Jamasbi E, Kazemi S, Amerkani S, Talei GR, Moradi P, Jalalifar S, Yousefimashouf R, Hossain MA, Keyvani H, Karampoor S. The emerging role of probiotics as a mitigation strategy against coronavirus disease 2019 (COVID-19). Archives of Virology. PMID 33745067 DOI: 10.1007/s00705-021-05036-8   
2021 Ravindra NG, Alfajaro MM, Gasque V, Huston NC, Wan H, Szigeti-Buck K, Yasumoto Y, Greaney AM, Habet V, Chow RD, Chen JS, Wei J, Filler RB, Wang B, Wang G, et al. Single-cell longitudinal analysis of SARS-CoV-2 infection in human airway epithelium identifies target cells, alterations in gene expression, and cell state changes. Plos Biology. 19: e3001143. PMID 33730024 DOI: 10.1371/journal.pbio.3001143   
2021 Zheng H, Rao AM, Dermadi D, Toh J, Murphy Jones L, Donato M, Liu Y, Su Y, Dai CL, Kornilov SA, Karagiannis M, Marantos T, Hasin-Brumshtein Y, He YD, Giamarellos-Bourboulis EJ, et al. Multi-cohort analysis of host immune response identifies conserved protective and detrimental modules associated with severity across viruses. Immunity. PMID 33765435 DOI: 10.1016/j.immuni.2021.03.002   
2021 Dixon DCK, Ratan C, Nair B, Mangalath S, Abraham R, Nath LR. RNA sensors as a mechanism of innate immune evasion among SARS-CoV2, HIV and Nipah viruses. Current Protein & Peptide Science. PMID 33749559 DOI: 10.2174/1389203722666210322142725   
2021 Wang F. Sending Out Alarms: A Perspective on Intercellular Communications in Insect Antiviral Immune Response. Frontiers in Immunology. 12: 613729. PMID 33708207 DOI: 10.3389/fimmu.2021.613729   
2021 Chege GK, Adams CH, Keyser AT, Bekker V, Morris L, Villinger FJ, Williamson AL, Chapman RE. Infection of Chinese Rhesus Monkeys with a Subtype C SHIV Resulted in Attenuated In Vivo Viral Replication Despite Successful Animal-to-Animal Serial Passages. Viruses. 13. PMID 33801437 DOI: 10.3390/v13030397   
2021 Prabhu VM, Padwal V, Velhal S, Salwe S, Nagar V, Patil P, Bandivdekar AH, Patel V. Vaginal Epithelium Transiently Harbours HIV-1 Facilitating Transmission. Frontiers in Cellular and Infection Microbiology. 11: 634647. PMID 33816339 DOI: 10.3389/fcimb.2021.634647   
2021 Fosse JH, Haraldsen G, Falk K, Edelmann R. Endothelial Cells in Emerging Viral Infections. Frontiers in Cardiovascular Medicine. 8: 619690. PMID 33718448 DOI: 10.3389/fcvm.2021.619690   
2021 Czuppon P, Débarre F, Gonçalves A, Tenaillon O, Perelson AS, Guedj J, Blanquart F. Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action. Plos Computational Biology. 17: e1008752. PMID 33647008 DOI: 10.1371/journal.pcbi.1008752   
2021 Carter C, Hughes P, McHugh A, Nadat F, Lewthwaite P, Savic S, Clark B. SARS-CoV-2 diagnostics: Towards a more comprehensive approach to routine patient testing. Journal of Immunological Methods. 113044. PMID 33785349 DOI: 10.1016/j.jim.2021.113044   
2021 Felt SA, Sun Y, Jozwik A, Paras A, Habibi MS, Nickle D, Anderson L, Achouri E, Feemster KA, Cárdenas AM, Turi KN, Chang M, Hartert TV, Sengupta S, Chiu C, et al. Detection of respiratory syncytial virus defective genomes in nasal secretions is associated with distinct clinical outcomes. Nature Microbiology. PMID 33795879 DOI: 10.1038/s41564-021-00882-3   
2021 Yan H, Sun J, Wang K, Wang H, Wu S, Bao L, He W, Wang D, Zhu A, Zhang T, Gao R, Dong B, Li J, Yang L, Zhong M, et al. Repurposing CFDA-approved drug carrimycin as an antiviral agent against human coronaviruses, including the currently pandemic SARS-CoV-2. Acta Pharmaceutica Sinica. B. PMID 33723501 DOI: 10.1016/j.apsb.2021.02.024   
2021 Choudhury SKM, Ma X, Abdullah SW, Zheng H. Activation and Inhibition of the NLRP3 Inflammasome by RNA Viruses. Journal of Inflammation Research. 14: 1145-1163. PMID 33814921 DOI: 10.2147/JIR.S295706   
2021 Patel DR, Field CJ, Septer KM, Sim DG, Jones MJ, Heinly TA, Vanderford TH, McGraw EA, Sutton TC. Transmission and protection against re-infection in the ferret model with the SARS-CoV-2 USA-WA1/2020 reference isolate. Journal of Virology. PMID 33827954 DOI: 10.1128/JVI.02232-20   
2021 Saygili E, Yildiz-Ozturk E, Green MJ, Ghaemmaghami AM, Yesil-Celiktas O. Human lung-on-chips: Advanced systems for respiratory virus models and assessment of immune response. Biomicrofluidics. 15: 021501. PMID 33791050 DOI: 10.1063/5.0038924   
2021 Saygili E, Yildiz-Ozturk E, Green MJ, Ghaemmaghami AM, Yesil-Celiktas O. Human lung-on-chips: Advanced systems for respiratory virus models and assessment of immune response. Biomicrofluidics. 15: 021501. PMID 33791050 DOI: 10.1063/5.0038924   
2021 Yanhua MA, Wang Y, Zan X, Wu Y, Wang J, Li G, Chai C, Fu C, Wang S, Yin H, Wang W. Phylogenetic and pathogenicity analysis of a novel lineage of caprine parainfluenza virus type 3. Microbial Pathogenesis. 104854. PMID 33757898 DOI: 10.1016/j.micpath.2021.104854   
2021 Susarla SK, Palkar S, Sv PS, Diwan A, Barsode S, Satish M, Rajashakar BC, Sandhya G, Lingala R, Sahoo DP. Safety and immunogenicity of inactivated hepatitis-A vaccine developed by Human Biologicals Institute in two age groups of healthy subjects: A phase I open label study. Vaccine. PMID 33741190 DOI: 10.1016/j.vaccine.2021.03.012   
2021 Chen YC. CRISPR based genome editing and removal of human viruses. Progress in Molecular Biology and Translational Science. 179: 93-116. PMID 33785179 DOI: 10.1016/bs.pmbts.2020.12.014   
2021 Vincent F, Sheyn U, Porat Z, Schatz D, Vardi A. Visualizing active viral infection reveals diverse cell fates in synchronized algal bloom demise. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33707211 DOI: 10.1073/pnas.2021586118   
2021 Martins M, Ramos LFC, Murillo JR, Torres A, de Carvalho SS, Domont GB, de Oliveira DMP, Mesquita RD, Nogueira FCS, Maciel-de-Freitas R, Junqueira M. Comprehensive Quantitative Proteome Analysis of Identifies Proteins and Pathways Involved in and Zika Virus Interference Phenomenon. Frontiers in Physiology. 12: 642237. PMID 33716790 DOI: 10.3389/fphys.2021.642237   
2021 Sefik E, Israelow B, Zhao J, Qu R, Song E, Mirza H, Kaffe E, Halene S, Meffre E, Kluger Y, Nussenzweig M, Wilen C, Iwasaki A, Flavell RA. A humanized mouse model of chronic COVID-19 to evaluate disease mechanisms and treatment options. Research Square. PMID 33758831 DOI: 10.21203/   
2021 Tian B, Cai D, Wang M, He T, Deng L, Wu L, Jia R, Zhu D, Liu M, Chen S, Yang Q, Wu Y, Zhao X, Zhang S, Rehman MU, et al. SC75741 antagonizes vesicular stomatitis virus, duck Tembusu virus, and duck plague virus infection in duck cells through promoting innate immune responses. Poultry Science. 100: 101085. PMID 33799115 DOI: 10.1016/j.psj.2021.101085   
2021 Park M, Pawliuk C, Nguyen T, Griffitt A, Dix-Cooper L, Fourik N, Dawes M. Determining the communicable period of SARS-CoV-2: A rapid review of the literature, March to September 2020. Euro Surveillance : Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin. 26. PMID 33834961 DOI: 10.2807/1560-7917.ES.2021.26.14.2001506   
2021 de Mello IS, Fernandes DR, Furtado ND, Dos Santos AAC, Dos Santos MP, Ribeiro IP, Raphael LMS, Nogueira MDS, da Cruz SOD, Rocha ADS, Manso PPA, Pelajo-Machado M, Bonaldo MC. Recovery of Synthetic Zika Virus Based on Rio-U1 Isolate Using a Genetically Stable Two Plasmid System and cDNA Amplification. Frontiers in Microbiology. 12: 639655. PMID 33717035 DOI: 10.3389/fmicb.2021.639655   
2021 Soni B, Singh S. COVID-19 co-infection mathematical model as guided through signaling structural framework. Computational and Structural Biotechnology Journal. 19: 1672-1683. PMID 33815692 DOI: 10.1016/j.csbj.2021.03.028   
2021 Addetia A, Phung Q, Bradley BT, Lin M, Zhu H, Xie H, Huang ML, Greninger AL. In generation of BK and JC polyomavirus defective viral genomes in human urine samples associated with higher viral loads. Journal of Virology. PMID 33827948 DOI: 10.1128/JVI.00250-21   
2021 Li J, Wang H, Lian P, Bai Y, Zhang Z, Zhao L, Xu T, Qiao J. Increased pulmonary pneumococcal clearance after resolution of H9N2 avian influenza virus infection in mice. Infection and Immunity. PMID 33722928 DOI: 10.1128/IAI.00062-21   
2021 Unal MA, Bayrakdar F, Fusco L, Besbinar O, Shuck CE, Yalcin S, Erken MT, Ozkul A, Gurcan C, Panatli O, Summak GY, Gokce C, Orecchioni M, Gazzi A, Vitale F, et al. 2D MXenes with antiviral and immunomodulatory properties: a pilot study against SARS-CoV-2. Nano Today. 101136. PMID 33753982 DOI: 10.1016/j.nantod.2021.101136   
2021 Campillo M, Smith SH, Gally DL, Opriessnig T. Review of methods for the detection of infection in pigs. Journal of Veterinary Diagnostic Investigation : Official Publication of the American Association of Veterinary Laboratory Diagnosticians, Inc. 10406387211003551. PMID 33739176 DOI: 10.1177/10406387211003551   
2021 Shah M, Kumar S. Adaptation and characterization of Anatid herpesvirus 1 in different permissible cell lines. Biologicals : Journal of the International Association of Biological Standardization. PMID 33744089 DOI: 10.1016/j.biologicals.2021.02.003   
2021 Sun D, Hsu A, Bogardus L, Rubinstein LJ, Antonello JM, Gurney KB, Whiteman MC, Dellatore S. Development and qualification of a fast, high-throughput and robust imaging-based neutralization assay for respiratory syncytial virus. Journal of Immunological Methods. 113054. PMID 33845088 DOI: 10.1016/j.jim.2021.113054   
2021 Hartlage AS, Dravid P, Walker CM, Kapoor A. Adenovirus-vectored T cell vaccine for hepacivirus shows reduced effectiveness against a CD8 T cell escape variant in rats. Plos Pathogens. 17: e1009391. PMID 33735321 DOI: 10.1371/journal.ppat.1009391   
2021 Umeoguaju FU, Ephraim-Emmanuel BC, Patrick-Iwuanyanwu KC, Zelikoff JT, Orisakwe OE. Plant-Derived Food Grade Substances (PDFGS) Active Against Respiratory Viruses: A Systematic Review of Non-clinical Studies. Frontiers in Nutrition. 8: 606782. PMID 33634160 DOI: 10.3389/fnut.2021.606782   
2021 Zhao L, Hao Y, Song Z, Fan Y, Li S. TRIM37 negatively regulates inflammatory responses induced by virus infection via controlling TRAF6 ubiquitination. Biochemical and Biophysical Research Communications. 556: 87-92. PMID 33839419 DOI: 10.1016/j.bbrc.2021.03.147   
2021 Mangold CA, Rathbun MM, Renner DW, Kuny CV, Szpara ML. Viral infection of human neurons triggers strain-specific differences in host neuronal and viral transcriptomes. Plos Pathogens. 17: e1009441. PMID 33750985 DOI: 10.1371/journal.ppat.1009441   
2021 Karauzum H, Venkatasubramaniam A, Adhikari RP, Kort T, Holtsberg FW, Mukherjee I, Mednikov M, Ortines R, Nguyen NTQ, Doan TMN, Diep BA, Lee JC, Aman MJ. IBT-V02: A Multicomponent Toxoid Vaccine Protects Against Primary and Secondary Skin Infections Caused by . Frontiers in Immunology. 12: 624310. PMID 33777005 DOI: 10.3389/fimmu.2021.624310   
2021 Prince T, Smith SL, Radford AD, Solomon T, Hughes GL, Patterson EI. SARS-CoV-2 Infections in Animals: Reservoirs for Reverse Zoonosis and Models for Study. Viruses. 13. PMID 33802857 DOI: 10.3390/v13030494   
2021 Donahue RN, Marté JL, Goswami M, Toney NJ, Tsai YT, Gulley JL, Schlom J. Interrogation of the cellular immunome of cancer patients with regard to the COVID-19 pandemic. Journal For Immunotherapy of Cancer. 9. PMID 33707314 DOI: 10.1136/jitc-2020-002087   
2021 Alexander MR, Brice AM, Jansen van Vuren P, Rootes CL, Tribolet L, Cowled C, Bean AGD, Stewart CR. Ribosome-Profiling Reveals Restricted Post Transcriptional Expression of Antiviral Cytokines and Transcription Factors during SARS-CoV-2 Infection. International Journal of Molecular Sciences. 22. PMID 33806254 DOI: 10.3390/ijms22073392   
2021 Liu R, Americo JL, Cotter CA, Earl PL, Erez N, Peng C, Moss B. One or two injections of MVA-vectored vaccine shields hACE2 transgenic mice from SARS-CoV-2 upper and lower respiratory tract infection. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33688035 DOI: 10.1073/pnas.2026785118