Cristina M. Sandoval, Ph.D. - Related publications

2014 Chemistry University of Colorado, Boulder, Boulder, CO, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Maryam A, Khalid RR, Vedithi SC, Ece A, Çınaroğlu SS, Siddiqi AR, Blundell TL. Exploring the structural basis of conformational heterogeneity and autoinhibition of human cGMP-specific protein kinase Iα through computational modelling and molecular dynamics simulations. Computational and Structural Biotechnology Journal. 18: 1625-1638. PMID 32670503 DOI: 10.1016/j.csbj.2020.06.016   
2020 Bhat AS, Kinch LN, Grishin NV. β-Strand-mediated interactions of protein domains. Proteins. PMID 32543729 DOI: 10.1002/prot.25970   
2020 Vignesh R, Aradhyam GK. Change in domain cooperativity drives function of calnuc. Biochemistry. PMID 32543177 DOI: 10.1021/acs.biochem.0c00207   
2020 Chang TH, Hsieh FL, Smallwood PM, Gabelli SB, Nathans J. Structure of the RECK CC domain, an evolutionary anomaly. Proceedings of the National Academy of Sciences of the United States of America. PMID 32541044 DOI: 10.1073/pnas.2006332117   
2020 Manne K, Chattopadhyay D, Agarwal V, Blom AM, Khare B, Chakravarthy S, Chang C, Ton-That H, Narayana SVL. Novel structure of the N-terminal helical domain of BibA, a group B streptococcus immunogenic bacterial adhesin. Acta Crystallographica. Section D, Structural Biology. 76: 759-770. PMID 32744258 DOI: 10.1107/S2059798320008116   
2020 Visconti L, Toto A, Jarvis JA, Troilo F, Malagrinò F, De Simone A, Gianni S. Demonstration of Binding Induced Structural Plasticity in a SH2 Domain. Frontiers in Molecular Biosciences. 7: 89. PMID 32528972 DOI: 10.3389/fmolb.2020.00089   
2020 Panchamia B, Raimalani V, Prashar V, Kumar M, Ratna Prabha C. Structural and Functional Characterisation of the Domains of Ubiquitin-Activating Enzyme (E1) of Saccharomyces cerevisiae. Cell Biochemistry and Biophysics. PMID 32583128 DOI: 10.1007/s12013-020-00924-3   
2020 Geiger JH, Ghanbarpour A, Santos EM, Pinger CH, Assar Z, Nasr SH, Vasileiou C, Spence D, Borhan BH. Human Cellular Retinol Binding Protein II Forms a Domain-Swapped Trimer Representing a Novel Fold and a New Template for Protein Engineering. Chembiochem : a European Journal of Chemical Biology. PMID 32608180 DOI: 10.1002/cbic.202000405   
2020 Yamamoto F, Morisaka H, Ueda M, Watanabe K. Molecular characterization of a prolyl endopeptidase from a feather-degrading thermophile Meiothermus ruber H328. Journal of Biochemistry. PMID 32597969 DOI: 10.1093/jb/mvaa069   
2020 Domański J, Sansom MSP, Stansfeld PJ, Best RB. Atomistic mechanism of transmembrane helix association. Plos Computational Biology. 16: e1007919. PMID 32497094 DOI: 10.1371/journal.pcbi.1007919   
2020 Butt BG, Scourfield EJ, Graham SC. Non-native fold of the putative VPS39 zinc finger domain. Wellcome Open Research. 5: 154. PMID 32724865 DOI: 10.12688/wellcomeopenres.16078.1   
2020 Zhu M, Ou D, Khan MH, Zhao S, Zhu Z, Niu L. Structural insights into the formation of oligomeric state by a type I Hsp40 chaperone. Biochimie. PMID 32621942 DOI: 10.1016/j.biochi.2020.06.009   
2020 Kumar R, Maksudov F, Kononova O, Marx KA, Barsegov V, Singh BR. Botulinum Endopeptidase: SAXS Experiments and MD Simulations Reveal Extended Solution Structures That Account for Its Biochemical Properties. The Journal of Physical Chemistry. B. PMID 32543194 DOI: 10.1021/acs.jpcb.0c02817   
2020 Outlaw VK, Kreitler DF, Stelitano D, Porotto M, Moscona A, Gellman SH. Effects of single α-to-β residue replacements on recognition of an extended segment in a viral fusion protein. Acs Infectious Diseases. PMID 32692914 DOI: 10.1021/acsinfecdis.0c00385   
2020 Tomiczek B, Delewski W, Nierzwicki L, Stolarska M, Grochowina I, Schilke B, Dutkiewicz R, Uzarska MA, Ciesielski SJ, Czub J, Craig EA, Marszalek J. Two-step mechanism of J-domain action in driving Hsp70 function. Plos Computational Biology. 16: e1007913. PMID 32479549 DOI: 10.1371/journal.pcbi.1007913   
2020 Sluysmans D, Willet N, Thevenot J, Lecommandoux S, Duwez AS. Single-molecule mechanical unfolding experiments reveal a critical length for the formation of α-helices in peptides. Nanoscale Horizons. 5: 671-678. PMID 32226978 DOI: 10.1039/d0nh00036a   
2020 Wester JR, Lewis JA, Freeman R, Sai H, Palmer LC, Henrich SE, Stupp SI. Supramolecular Exchange among Assemblies of Opposite Charge Leads to Hierarchical Structures. Journal of the American Chemical Society. PMID 32598851 DOI: 10.1021/jacs.0c03529   
2020 Liao TJ, Jang H, Fushman D, Nussinov R. SOS1 interacts with Grb2 through regions that induce closed nSH3 conformations. The Journal of Chemical Physics. 153: 045106. PMID 32752665 DOI: 10.1063/5.0013926   
2020 Marasco M, Carlomagno T. Specificity and regulation of phosphotyrosine signaling through SH2 domains. Journal of Structural Biology: X. 4: 100026. PMID 32647828 DOI: 10.1016/j.yjsbx.2020.100026   
2020 Bhunia A, Ilyas H, Bhattacharjya S. Salt Dependence Conformational Stability of the Dimeric SAM Domain of MAPKKK Ste11 from Budding Yeast: A Native State H/D Exchange NMR Study". Biochemistry. PMID 32667811 DOI: 10.1021/acs.biochem.0c00522   
2020 Ye Q, West AMV, Silletti S, Corbett KD. Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein. Protein Science : a Publication of the Protein Society. PMID 32654247 DOI: 10.1002/pro.3909   
2020 Bahun M, Hartman K, Poklar Ulrih N. Periplasmic production of pernisine in Escherichia coli and determinants for its high thermostability. Applied Microbiology and Biotechnology. PMID 32734388 DOI: 10.1007/s00253-020-10791-w   
2020 Piepoli S, Alt AO, Atilgan C, Mancini EJ, Erman B. Structural analysis of the PATZ1 BTB domain homodimer. Acta Crystallographica. Section D, Structural Biology. 76: 581-593. PMID 32496219 DOI: 10.1107/S2059798320005355   
2020 Pham TK, Kim YW. Helix stabilization by stapled N-capping box. Bioorganic Chemistry. 101: 104024. PMID 32629279 DOI: 10.1016/j.bioorg.2020.104024   
2020 Chan-Yao-Chong M, Marsin S, Quevillon-Cheruel S, Durand D, Ha-Duong T. Structural ensemble and biological activity of DciA intrinsically disordered region. Journal of Structural Biology. 107573. PMID 32679070 DOI: 10.1016/j.jsb.2020.107573   
2020 Whittingham JL, Hanai S, Brannigan JA, Ferreira WT, Dodson EJ, Turkenburg JP, Cartwright J, Cutting SM, Wilkinson AJ. Crystal structures of the GH18 domain of the bifunctional peroxiredoxin-chitinase CotE from Clostridium difficile. Acta Crystallographica. Section F, Structural Biology Communications. 76: 241-249. PMID 32510464 DOI: 10.1107/S2053230X20006147   
2020 Davies JR, Britton A, Liu SM, Acharya KR. High resolution crystal structures of the botulinum neurotoxin binding domains from subtypes A5 and A6. Febs Open Bio. PMID 32654405 DOI: 10.1002/2211-5463.12931   
2020 Thomas C, Tampé R. Structural and Mechanistic Principles of ABC Transporters. Annual Review of Biochemistry. 89: 605-636. PMID 32569521 DOI: 10.1146/annurev-biochem-011520-105201   
2020 Nakayoshi T, Kato K, Kurimoto E, Oda A. Influence of the conformations of αA-crystallin peptides on the isomerization rates of aspartic acid residues. Biochimica Et Biophysica Acta. Proteins and Proteomics. 1868: 140480. PMID 32599296 DOI: 10.1016/j.bbapap.2020.140480   
2020 Zimanyi CM, Guo M, Mahmood A, Hendrickson WA, Hirsh D, Cheung J. Structure of the Regulatory Cytosolic Domain of a Eukaryotic Potassium-Chloride Cotransporter. Structure (London, England : 1993). PMID 32679039 DOI: 10.1016/j.str.2020.06.009   
2020 Ruben EA, Planer W, Chinnaraj M, Chen Z, Zuo X, Pengo V, De Filippis V, Alluri RK, McCrae KR, Macor P, Tedesco F, Pozzi N. The J-elongated conformation of β-glycoprotein I predominates in solution: Implications for our understanding of antiphospholipid syndrome. The Journal of Biological Chemistry. PMID 32518155 DOI: 10.1074/jbc.RA120.013939   
2020 Song WS, Hong HJ, Yoon SI. Structural study of the flagellar junction protein FlgL from Legionella pneumophila. Biochemical and Biophysical Research Communications. 529: 513-518. PMID 32703460 DOI: 10.1016/j.bbrc.2020.06.012   
2020 Schubeis T, Schwarzer TS, Le Marchand T, Stanek J, Movellan KT, Castiglione K, Pintacuda G, Andreas LB. Resonance assignment of the outer membrane protein AlkL in lipid bilayers by proton-detected solid-state NMR. Biomolecular Nmr Assignments. PMID 32607893 DOI: 10.1007/s12104-020-09964-5   
2020 Wang J, Xiang R, Wang R, Zhang B, Gong W, Zhang J, Zhang M, Wang M. The variable oligomeric state of Amuc_1100 from Akkermansia muciniphila. Journal of Structural Biology. 107593. PMID 32736072 DOI: 10.1016/j.jsb.2020.107593   
2020 Wakamoto T, Kitazawa S, Kameda T, Kitahara R. Dynamic aspects of pressure and temperature-stabilized intermediates of outer surface protein A. Proteins. PMID 32519353 DOI: 10.1002/prot.25962   
2020 Stalmans G, Lilina AV, Vermeire PJ, Fiala J, Novák P, Strelkov SV. Addressing the Molecular Mechanism of Longitudinal Lamin Assembly Using Chimeric Fusions. Cells. 9. PMID 32645958 DOI: 10.3390/cells9071633   
2020 Jaworek MW, Ruggiero A, Graziano G, Winter R, Vitagliano L. On the extraordinary pressure stability of the Thermotoga maritima arginine binding protein and its folded fragments - a high-pressure FTIR spectroscopy study. Physical Chemistry Chemical Physics : Pccp. 22: 11244-11248. PMID 32400824 DOI: 10.1039/d0cp01618g   
2020 Tomasek D, Rawson S, Lee J, Wzorek JS, Harrison SC, Li Z, Kahne D. Structure of a nascent membrane protein as it folds on the BAM complex. Nature. PMID 32528179 DOI: 10.1038/s41586-020-2370-1   
2020 Chakraborty R, Fan JS, Lai CC, Raghuvamsi PV, Chee PX, Anand GS, Yang D. Structural Basis of Oligomerization of N-Terminal Domain of Spider Aciniform Silk Protein. International Journal of Molecular Sciences. 21. PMID 32586030 DOI: 10.3390/ijms21124466   
2020 Potter ZE, Lau HT, Chakraborty S, Fang L, Guttman M, Ong SE, Fowler DM, Maly DJ. Parallel Chemoselective Profiling for Mapping Protein Structure. Cell Chemical Biology. PMID 32649906 DOI: 10.1016/j.chembiol.2020.06.014   
2020 Thakur A, Sharma K, Jaiswal K, Goyal A. Structure and dynamics analysis of a family 43 glycoside hydrolase α-L-arabinofuranosidase (PsGH43_12) from Pseudopedobacter saltans by computational modeling and small-angle X-ray scattering. International Journal of Biological Macromolecules. 163: 582-592. PMID 32640320 DOI: 10.1016/j.ijbiomac.2020.07.007   
2020 Sriroopreddy R, Raghuraman P, Sudandiradoss C. Structural debilitation of mutation G322D associated with MSH2 and their role in triple negative breast cancer. Journal of Biomolecular Structure & Dynamics. 38: 771-780. PMID 30806579 DOI: 10.1080/07391102.2019.1587512   
2020 Lou JW, Mazhab-Jafari MT. Steric occlusion regulates proximal interactions of acyl carrier protein domain in fungal fatty acid synthase. Communications Biology. 3: 274. PMID 32471977 DOI: 10.1038/s42003-020-0997-y   
2020 Kriegler T, Lang S, Notari L, Hessa T. Prion Protein Translocation Mechanism Revealed by Pulling Force Studies. Journal of Molecular Biology. PMID 32502491 DOI: 10.1016/j.jmb.2020.05.022   
2020 Chen J, Qi Y, Duan Y, Duan M, Yang M. C1188D mutation abolishes specific recognition between MLL1-CXXC domain and CpG site by inducing conformational switch of flexible N- terminal. Proteins. PMID 32519403 DOI: 10.1002/prot.25960   
2020 Hosford CJ, Adams MC, Niu Y, Chappie JS. The N-terminal domain of Staphylothermus marinus McrB shares structural homology with PUA-like RNA binding proteins Journal of Structural Biology. PMID 32652237 DOI: 10.1016/j.jsb.2020.107572   
2020 Jeong S, Ahn J, Kwon AR, Ha NC. Cleavage-Dependent Activation of ATP-Dependent Protease HslUV from . Molecules and Cells. PMID 32694241 DOI: 10.14348/molcells.2020.0074   
2020 Chen Z, Wasney GA, Picaud S, Filippakopoulos P, Vedadi M, D'Angiolella V, Bullock AN. Identification of a PGXPP degron motif in dishevelled and structural basis for its binding to the E3 ligase KLHL12. Open Biology. 10: 200041. PMID 32574548 DOI: 10.1098/rsob.200041   
2020 Sun J, Frishman D. DeepHelicon: accurate prediction of inter-helical residue contacts in transmembrane proteins by residual neural networks. Journal of Structural Biology. 107574. PMID 32663598 DOI: 10.1016/j.jsb.2020.107574   
2020 Pal S, Banerjee S, Kumar A, Prabhakaran EN. H-Bond Surrogate-Stabilized Shortest Single-Turn α-Helices: sp Constraints and Residue Preferences for the Highest α-Helicities. Acs Omega. 5: 13902-13912. PMID 32566857 DOI: 10.1021/acsomega.0c01277