| Year |
Citation |
Score |
| 2023 |
Liu J, Spencer N, Utter DR, Grossman A, Santos NCD, Shi W, Baker JL, Hasturk H, He X, Bor B. Persistent enrichment of multidrug resistant in oral and nasal communities during long-term starvation. Biorxiv : the Preprint Server For Biology. PMID 38187725 DOI: 10.1101/2023.12.18.572173 |
0.301 |
|
| 2017 |
Agnello M, Cen L, Tran NC, Shi W, McLean JS, He X. Arginine Improves pH Homeostasis via Metabolism and Microbiome Modulation. Journal of Dental Research. 22034517707512. PMID 28486080 DOI: 10.1177/0022034517707512 |
0.379 |
|
| 2017 |
Zhao X, Shen M, Jiang X, Shen W, Zhong Q, Yang Y, Tan Y, Agnello M, He X, Hu F, Le S. Transcriptomic and Metabolomics Profiling of Phage-Host Interactions between Phage PaP1 and Pseudomonas aeruginosa. Frontiers in Microbiology. 8: 548. PMID 28421049 DOI: 10.3389/Fmicb.2017.00548 |
0.331 |
|
| 2017 |
Baker JL, Bor B, Agnello M, Shi W, He X. Ecology of the Oral Microbiome: Beyond Bacteria. Trends in Microbiology. PMID 28089325 DOI: 10.1016/J.Tim.2016.12.012 |
0.397 |
|
| 2016 |
Guo L, Shokeen B, He X, Shi W, Lux R. Streptococcus mutans SpaP Binds to RadD of Fusobacterium nucleatum ssp polymorphum. Molecular Oral Microbiology. PMID 27976528 DOI: 10.1111/Omi.12177 |
0.355 |
|
| 2016 |
Bor B, Cen L, Agnello M, Shi W, He X. Morphological and physiological changes induced by contact-dependent interaction between Candida albicans and Fusobacterium nucleatum. Scientific Reports. 6: 27956. PMID 27295972 DOI: 10.1038/Srep27956 |
0.33 |
|
| 2016 |
Ren W, Xun Z, Wang Z, Zhang Q, Liu X, Zheng H, Zhang Q, Zhang Y, Zhang L, Wu C, Zheng S, Qin N, Ehrlich SD, Li Y, He X, et al. Tongue Coating and the Salivary Microbial Communities Vary in Children with Halitosis. Scientific Reports. 6: 24481. PMID 27080513 DOI: 10.1038/Srep24481 |
0.316 |
|
| 2016 |
Edlund A, Liu Q, Watling M, To TT, Bumgarner RE, He X, Shi W, McLean JS. High-Quality Draft Genome Sequence of Low-pH-Active Veillonella parvula Strain SHI-1, Isolated from Human Saliva within an In Vitro Oral Biofilm Model. Genome Announcements. 4. PMID 26893419 DOI: 10.1128/Genomea.01684-15 |
0.305 |
|
| 2015 |
Guo L, McLean JS, Lux R, He X, Shi W. The well-coordinated linkage between acidogenicity and aciduricity via insoluble glucans on the surface of Streptococcus mutans. Scientific Reports. 5: 18015. PMID 26657939 DOI: 10.1038/Srep18015 |
0.331 |
|
| 2015 |
Bor B, Poweleit N, Bois JS, Cen L, Bedree JK, Zhou ZH, Gunsalus RP, Lux R, McLean JS, He X, Shi W. Phenotypic and Physiological Characterization of the Epibiotic Interaction Between TM7x and Its Basibiont Actinomyces. Microbial Ecology. PMID 26597961 DOI: 10.1007/S00248-015-0711-7 |
0.326 |
|
| 2015 |
Wu T, Cen L, Kaplan C, Zhou X, Lux R, Shi W, He X. Cellular Components Mediating Coadherence of Candida albicans and Fusobacterium nucleatum. Journal of Dental Research. PMID 26152186 DOI: 10.1177/0022034515593706 |
0.353 |
|
| 2015 |
Guo L, McLean JS, Yang Y, Eckert R, Kaplan CW, Kyme P, Sheikh O, Varnum B, Lux R, Shi W, He X. Precision-guided antimicrobial peptide as a targeted modulator of human microbial ecology. Proceedings of the National Academy of Sciences of the United States of America. 112: 7569-74. PMID 26034276 DOI: 10.1073/Pnas.1506207112 |
0.379 |
|
| 2015 |
Edlund A, Yang Y, Yooseph S, Hall AP, Nguyen DD, Dorrestein PC, Nelson KE, He X, Lux R, Shi W, McLean JS. Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism. The Isme Journal. PMID 26023872 DOI: 10.1038/Ismej.2015.72 |
0.345 |
|
| 2015 |
Wu T, He X, Lu H, Bradshaw DJ, Axe A, Loewy Z, Liu H, Shi W, Lux R. Development of In Vitro Denture Biofilm Models for Halitosis Related Bacteria and their Application in Testing the Efficacy of Antimicrobial Agents. The Open Dentistry Journal. 9: 125-31. PMID 25926895 DOI: 10.2174/1874210601509010125 |
0.335 |
|
| 2015 |
He X, McLean JS, Edlund A, Yooseph S, Hall AP, Liu SY, Dorrestein PC, Esquenazi E, Hunter RC, Cheng G, Nelson KE, Lux R, Shi W. Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle. Proceedings of the National Academy of Sciences of the United States of America. 112: 244-9. PMID 25535390 DOI: 10.1073/Pnas.1419038112 |
0.34 |
|
| 2014 |
Guo L, He X, Shi W. Intercellular communications in multispecies oral microbial communities. Frontiers in Microbiology. 5: 328. PMID 25071741 DOI: 10.3389/Fmicb.2014.00328 |
0.387 |
|
| 2014 |
Le S, Yao X, Lu S, Tan Y, Rao X, Li M, Jin X, Wang J, Zhao Y, Wu NC, Lux R, He X, Shi W, Hu F. Chromosomal DNA deletion confers phage resistance to Pseudomonas aeruginosa. Scientific Reports. 4: 4738. PMID 24770387 DOI: 10.1038/Srep04738 |
0.306 |
|
| 2014 |
Kaplan A, Kaplan CW, He X, McHardy I, Shi W, Lux R. Characterization of aid1, a novel gene involved in Fusobacterium nucleatum interspecies interactions. Microbial Ecology. 68: 379-87. PMID 24643713 DOI: 10.1007/S00248-014-0400-Y |
0.382 |
|
| 2014 |
He X, McLean JS, Guo L, Lux R, Shi W. The social structure of microbial community involved in colonization resistance. The Isme Journal. 8: 564-74. PMID 24088624 DOI: 10.1038/Ismej.2013.172 |
0.39 |
|
| 2013 |
Edlund A, Yang Y, Hall AP, Guo L, Lux R, He X, Nelson KE, Nealson KH, Yooseph S, Shi W, McLean JS. An in vitro biofilm model system maintaining a highly reproducible species and metabolic diversity approaching that of the human oral microbiome. Microbiome. 1: 25. PMID 24451062 DOI: 10.1186/2049-2618-1-25 |
0.398 |
|
| 2013 |
Le S, He X, Tan Y, Huang G, Zhang L, Lux R, Shi W, Hu F. Mapping the tail fiber as the receptor binding protein responsible for differential host specificity of Pseudomonas aeruginosa bacteriophages PaP1 and JG004. Plos One. 8: e68562. PMID 23874674 DOI: 10.1371/Journal.Pone.0068562 |
0.302 |
|
| 2013 |
Pan H, He X, Lux R, Luan J, Shi W. Killing of Escherichia coli by Myxococcus xanthus in aqueous environments requires exopolysaccharide-dependent physical contact. Microbial Ecology. 66: 630-8. PMID 23828520 DOI: 10.1007/S00248-013-0252-X |
0.345 |
|
| 2013 |
Guo L, Hu W, He X, Lux R, McLean J, Shi W. investigating acid production by Streptococcus mutans with a surface-displayed pH-sensitive green fluorescent protein. Plos One. 8: e57182. PMID 23468929 DOI: 10.1371/Journal.Pone.0057182 |
0.341 |
|
| 2013 |
Guo L, Wu T, Hu W, He X, Sharma S, Webster P, Gimzewski JK, Zhou X, Lux R, Shi W. Phenotypic characterization of the foldase homologue PrsA in Streptococcus mutans. Molecular Oral Microbiology. 28: 154-65. PMID 23241367 DOI: 10.1111/Omi.12014 |
0.333 |
|
| 2012 |
Hu W, Li L, Sharma S, Wang J, McHardy I, Lux R, Yang Z, He X, Gimzewski JK, Li Y, Shi W. DNA builds and strengthens the extracellular matrix in Myxococcus xanthus biofilms by interacting with exopolysaccharides. Plos One. 7: e51905. PMID 23300576 DOI: 10.1371/Journal.Pone.0051905 |
0.322 |
|
| 2012 |
Wang R, Kaplan A, Guo L, Shi W, Zhou X, Lux R, He X. The influence of iron availability on human salivary microbial community composition. Microbial Ecology. 64: 152-61. PMID 22318873 DOI: 10.1007/S00248-012-0013-2 |
0.31 |
|
| 2012 |
He X, Hu W, Kaplan CW, Guo L, Shi W, Lux R. Adherence to streptococci facilitates Fusobacterium nucleatum integration into an oral microbial community. Microbial Ecology. 63: 532-42. PMID 22202886 DOI: 10.1007/S00248-011-9989-2 |
0.384 |
|
| 2011 |
He X, Hu W, He J, Guo L, Lux R, Shi W. Community-based interference against integration of Pseudomonas aeruginosa into human salivary microbial biofilm. Molecular Oral Microbiology. 26: 337-52. PMID 22053962 DOI: 10.1111/J.2041-1014.2011.00622.X |
0.412 |
|
| 2011 |
Chugal N, Wang JK, Wang R, He X, Kang M, Li J, Zhou X, Shi W, Lux R. Molecular characterization of the microbial flora residing at the apical portion of infected root canals of human teeth. Journal of Endodontics. 37: 1359-64. PMID 21924182 DOI: 10.1016/J.Joen.2011.06.020 |
0.307 |
|
| 2011 |
Wang RK, He XS, Hu W, Lux R, Li JY, Zhou XD, Shi WY. Analysis of interspecies adherence of oral bacteria using a membrane binding assay coupled with polymerase chain reaction-denaturing gradient gel electrophoresis profiling. International Journal of Oral Science. 3: 90-7. PMID 21485313 DOI: 10.4248/Ijos11033 |
0.379 |
|
| 2010 |
Tian Y, He X, Torralba M, Yooseph S, Nelson KE, Lux R, McLean JS, Yu G, Shi W. Using DGGE profiling to develop a novel culture medium suitable for oral microbial communities Molecular Oral Microbiology. 25: 357-367. PMID 20883224 DOI: 10.1111/J.2041-1014.2010.00585.X |
0.384 |
|
| 2010 |
He X, Tian Y, Guo L, Lux R, Zusman DR, Shi W. Oral-derived bacterial flora defends its domain by recognizing and killing intruders--a molecular analysis using Escherichia coli as a model intestinal bacterium. Microbial Ecology. 60: 655-64. PMID 20625713 DOI: 10.1007/S00248-010-9708-4 |
0.4 |
|
| 2010 |
He X, Tian Y, Guo L, Ano T, Lux R, Zusman DR, Shi W. In vitro communities derived from oral and gut microbial floras inhibit the growth of bacteria of foreign origins. Microbial Ecology. 60: 665-76. PMID 20625712 DOI: 10.1007/S00248-010-9711-9 |
0.393 |
|
| 2009 |
He X, Shi W. Oral Microbiology: Past, Present and Future International Journal of Oral Science. 1: 47-58. PMID 20687296 DOI: 10.4248/Ijos.09029 |
0.37 |
|
| 2009 |
He X, Lux R, Kuramitsu HK, Anderson MH, Shi W. Achieving probiotic effects via modulating oral microbial ecology Advances in Dental Research. 21: 53-56. PMID 19710082 DOI: 10.1177/0895937409335626 |
0.384 |
|
| 2007 |
Kuramitsu HK, He X, Lux R, Anderson MH, Shi W. Interspecies interactions within oral microbial communities. Microbiology and Molecular Biology Reviews : Mmbr. 71: 653-70. PMID 18063722 DOI: 10.1128/Mmbr.00024-07 |
0.401 |
|
| 2005 |
He X, Bhateja M, Fuqua C. Promoter-probe cassettes with the gusA (beta-glucuronidase) reporter gene and several different antibiotic resistance markers. Journal of Microbiological Methods. 60: 281-3. PMID 15590103 DOI: 10.1016/J.Mimet.2004.10.005 |
0.515 |
|
| 2003 |
He X, Chang W, Pierce DL, Seib LO, Wagner J, Fuqua C. Quorum sensing in Rhizobium sp. strain NGR234 regulates conjugal transfer (tra) gene expression and influences growth rate. Journal of Bacteriology. 185: 809-22. PMID 12533456 DOI: 10.1128/Jb.185.3.809-822.2003 |
0.545 |
|
| Show low-probability matches. |