Valmik K. Vyas, Ph.D. - Publications

Affiliations: 
2004 Columbia University, New York, NY 
Area:
Molecular Biology, Genetics, Microbiology Biology

13/68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2013 Strijbis K, Tafesse FG, Fairn GD, Witte MD, Dougan SK, Watson N, Spooner E, Esteban A, Vyas VK, Fink GR, Grinstein S, Ploegh HL. Bruton's Tyrosine Kinase (BTK) and Vav1 contribute to Dectin1-dependent phagocytosis of Candida albicans in macrophages. Plos Pathogens. 9: e1003446. PMID 23825946 DOI: 10.1371/Journal.Ppat.1003446  1
2012 Bernstein DA, Vyas VK, Fink GR. Genes come and go: the evolutionarily plastic path of budding yeast RNase III enzymes. Rna Biology. 9: 1123-8. PMID 23018782 DOI: 10.4161/Rna.21360  1
2012 Kuhn DM, Vyas VK. The Candida glabrata adhesin Epa1p causes adhesion, phagocytosis, and cytokine secretion by innate immune cells. Fems Yeast Research. 12: 398-414. PMID 22225518 DOI: 10.1111/J.1567-1364.2011.00785.X  1
2012 Bernstein DA, Vyas VK, Weinberg DE, Drinnenberg IA, Bartel DP, Fink GR. Candida albicans Dicer (CaDcr1) is required for efficient ribosomal and spliceosomal RNA maturation. Proceedings of the National Academy of Sciences of the United States of America. 109: 523-8. PMID 22173636 DOI: 10.1073/Pnas.1118859109  1
2011 Esteban A, Popp MW, Vyas VK, Strijbis K, Ploegh HL, Fink GR. Fungal recognition is mediated by the association of dectin-1 and galectin-3 in macrophages. Proceedings of the National Academy of Sciences of the United States of America. 108: 14270-5. PMID 21825168 DOI: 10.1073/Pnas.1111415108  1
2005 Vyas VK, Berkey CD, Miyao T, Carlson M. Repressors Nrg1 and Nrg2 regulate a set of stress-responsive genes in Saccharomyces cerevisiae. Eukaryotic Cell. 4: 1882-91. PMID 16278455 DOI: 10.1128/Ec.4.11.1882-1891.2005  1
2004 Berkey CD, Vyas VK, Carlson M. Nrg1 and nrg2 transcriptional repressors are differently regulated in response to carbon source. Eukaryotic Cell. 3: 311-7. PMID 15075261 DOI: 10.1128/Ec.3.2.311-317.2004  1
2003 Kuchin S, Vyas VK, Kanter E, Hong SP, Carlson M. Std1p (Msn3p) positively regulates the Snf1 kinase in Saccharomyces cerevisiae. Genetics. 163: 507-14. PMID 12618390  1
2003 Vyas VK, Kuchin S, Berkey CD, Carlson M. Snf1 kinases with different beta-subunit isoforms play distinct roles in regulating haploid invasive growth. Molecular and Cellular Biology. 23: 1341-8. PMID 12556493 DOI: 10.1128/Mcb.23.4.1341-1348.2003  1
2003 Kuchin S, Vyas VK, Carlson M. Role of the yeast Snf1 protein kinase in invasive growth. Biochemical Society Transactions. 31: 175-7. PMID 12546679 DOI: 10.1042/Bst0310175  1
2002 Kuchin S, Vyas VK, Carlson M. Snf1 protein kinase and the repressors Nrg1 and Nrg2 regulate FLO11, haploid invasive growth, and diploid pseudohyphal differentiation. Molecular and Cellular Biology. 22: 3994-4000. PMID 12024013 DOI: 10.1128/Mcb.22.12.3994-4000.2002  1
2001 Vincent O, Kuchin S, Hong SP, Townley R, Vyas VK, Carlson M. Interaction of the Srb10 kinase with Sip4, a transcriptional activator of gluconeogenic genes in Saccharomyces cerevisiae. Molecular and Cellular Biology. 21: 5790-6. PMID 11486018 DOI: 10.1128/Mcb.21.17.5790-5796.2001  1
2001 Vyas VK, Kuchin S, Carlson M. Interaction of the repressors Nrg1 and Nrg2 with the Snf1 protein kinase in Saccharomyces cerevisiae. Genetics. 158: 563-72. PMID 11404322  1
Low-probability matches
2016 Srivastava P, Vyas VK, Variya B, Patel P, Qureshi G, Ghate M. Synthesis, anti-inflammatory, analgesic, 5-lipoxygenase (5-LOX) inhibition activities, and molecular docking study of 7-substituted coumarin derivatives. Bioorganic Chemistry. 67: 130-138. PMID 27376460 DOI: 10.1016/j.bioorg.2016.06.004  0.04
2016 Bhadada SV, Vyas VK, Goyal RK. Protective effect of Tephrosia purpurea in diabetic cataract through aldose reductase inhibitory activity. Biomedicine & Pharmacotherapy = Biomedecine & Pharmacotherapie. 83: 221-228. PMID 27372406 DOI: 10.1016/j.biopha.2016.05.018  0.04
2016 Vyas VK, Qureshi G, Ghate M, Patel H, Dalai S. Identification of novel PfDHODH inhibitors as antimalarial agents via pharmacophore-based virtual screening followed by molecular docking and in vivo antimalarial activity. Sar and Qsar in Environmental Research. 1-14. PMID 27310104 DOI: 10.1080/1062936X.2016.1189959  0.04
2016 Chaube UJ, Vyas VK, Bhatt HG. Design and synthesis of potent N-phenylpyrimidine derivatives for the treatment of skin cancer Rsc Advances. 6: 10285-10297. DOI: 10.1039/c5ra27017k  0.04
2015 Vyas VK, Ghate M, Patel K, Qureshi G, Shah S. Homology modeling, binding site identification and docking study of human angiotensin II type I (Ang II-AT1) receptor. Biomedicine & Pharmacotherapy = BioméDecine & PharmacothéRapie. 74: 42-8. PMID 26349961 DOI: 10.1016/j.biopha.2015.07.008  0.04
2015 Vyas VK, Goel A, Ghate M, Patel P. Ligand and structure-based approaches for the identification of SIRT1 activators. Chemico-Biological Interactions. 228: 9-17. PMID 25595223 DOI: 10.1016/j.cbi.2015.01.001  0.04
2015 Parikh P, Ghate M, Vyas VK. CoMFA and CoMSIA studies on 6,7-disubstituted-4-phenoxyquinoline derivatives as c-Met kinase inhibitors and anticancer agents Medicinal Chemistry Research. 24: 4078-4092. DOI: 10.1007/s00044-015-1450-5  0.04
2014 Vyas VK, Variya B, Ghate MD. Design, synthesis and pharmacological evaluation of novel substituted quinoline-2-carboxamide derivatives as human dihydroorotate dehydrogenase (hDHODH) inhibitors and anticancer agents European Journal of Medicinal Chemistry. 82: 385-393. PMID 24929289 DOI: 10.1016/j.ejmech.2014.05.064  0.04
2014 Vyas VK, Gupta N, Ghate M, Patel S. Design, synthesis, pharmacological evaluation and in silico ADMET prediction of novel substituted benzimidazole derivatives as angiotensin II-AT1 receptor antagonists based on predictive 3D QSAR models Sar and Qsar in Environmental Research. 25: 117-146. PMID 24598006 DOI: 10.1080/1062936X.2013.868825  0.04
2014 Patel P, Chintha C, Ghate M, Bhatt H, Vyas VK. 3D QSAR study of 4H-chromen-1,2,3,4-tetrahydropyrimidine-5-carboxylate derivatives as potential anti-mycobacterial agents Medicinal Chemistry Research. 23: 2955-2963. DOI: 10.1007/s00044-013-0881-0  0.04
2014 Gupta N, Vyas VK, Patel B, Ghate M. Predictive 3D-QSAR and HQSAR model generation of isocitrate lyase (ICL) inhibitors by various alignment methods combined with docking study Medicinal Chemistry Research. 23: 2757-2768. DOI: 10.1007/s00044-013-0865-0  0.04
2014 Chintha C, Gupta N, Ghate M, Vyas VK. Homology modeling, binding site identification, and docking study of human β-arrestin: An adaptor protein involved in apoptosis Medicinal Chemistry Research. 23: 1189-1201. DOI: 10.1007/s00044-013-0725-y  0.04
2014 Vyas VK, Patel A, Gupta N, Ghate M. Design of novel anaplastic lymphoma kinase (ALK) inhibitors based on predictive 3D QSAR models using different alignment strategies Medicinal Chemistry Research. 23: 603-617. DOI: 10.1007/s00044-013-0662-9  0.04
2013 Vyas VK, Ghate M, Chintha C, Patel P. 3D QSAR studies on substituted benzimidazole derivatives as angiotensin II-AT1 receptor antagonist Current Computer-Aided Drug Design. 9: 433-445. PMID 24010938 DOI: 10.2174/15734099113099990028  0.04
2013 Vyas VK, Brahmbhatt K, Bhatt H, Parmar U. Therapeutic potential of snake venom in cancer therapy: Current perspectives Asian Pacific Journal of Tropical Biomedicine. 3: 156-162. PMID 23593597 DOI: 10.1016/S2221-1691(13)60042-8  0.04
2013 Vyas VK, Ghate M, Goel A. Pharmacophore modeling, virtual screening, docking and in silico ADMET analysis of protein kinase B (PKB β) inhibitors. Journal of Molecular Graphics & Modelling. 42: 17-25. PMID 23507201 DOI: 10.1016/j.jmgm.2013.01.010  0.04
2013 Vyas VK, Bhatt HG, Patel PK, Jalu J, Chintha C, Gupta N, Ghate M. CoMFA and CoMSIA studies on C-aryl glucoside SGLT2 inhibitors as potential anti-diabetic agents Sar and Qsar in Environmental Research. 24: 519-551. PMID 23305412 DOI: 10.1080/1062936X.2012.751553  0.04
2013 Ghate M, Devi P, Parikh J, Vyas VK. Synthesis and QSAR modeling of novel benzimidazolo thiazolidinones, thiazinones and 5-arylidene-2-imino thiazolidinones as antibacterial agents Medicinal Chemistry. 9: 474-485. PMID 22920153 DOI: 10.2174/1573406411309030017  0.04
2013 Vyas VK, Ghate M. QSAR study on a series of aryl carboxylic acid amide derivatives as potential inhibitors of dihydroorotate dehydrogenase (DHODH) Medicinal Chemistry. 9: 222-239. PMID 22920152 DOI: 10.2174/1573406411309020007  0.04
2013 Vyas VK, Chintha C, Pandya MR. Biology and medicinal chemistry approaches towards various apoptosis inducers Anti-Cancer Agents in Medicinal Chemistry. 13: 433-455. PMID 22721391 DOI: 10.2174/1871520611313030007  0.04
2013 Vyas VK, Ghate M. Development of docking-based 3D QSAR models for the design of substituted quinoline derivatives as human dihydroorotate dehydrogenase (hDHODH) inhibitors Sar and Qsar in Environmental Research. 24: 625-645. DOI: 10.1080/1062936X.2013.792871  0.04
2013 Vyas VK, Ghate M, Gupta N. 3D QSAR and HQSAR analysis of protein kinase B (PKB/Akt) inhibitors using various alignment methods Arabian Journal of Chemistry. DOI: 10.1016/j.arabjc.2013.07.052  0.04
2013 Vyas VK, Gupta N, Ghate M. CoMFA and CoMSIA analysis of protein kinase B (PKBβ) inhibitors using various alignment methods Medicinal Chemistry Research. 22: 6046-6062. DOI: 10.1007/s00044-013-0593-5  0.04
2013 Vyas VK, Parikh H, Ghate M. 3D QSAR studies on 5-(2-methylbenzimidazol-1-yl)-N-alkylthiophene-2- carboxamide derivatives as P. falciparum dihydroorotate dehydrogenase (PfDHODH) inhibitors Medicinal Chemistry Research. 22: 2235-2243. DOI: 10.1007/s00044-012-0216-6  0.04
2012 Vyas VK, Ghate M. CoMFA and CoMSIA studies on aryl carboxylic acid amide derivatives as dihydroorotate dehydrogenase (DHODH) inhibitors vivek k. vyas Current Computer-Aided Drug Design. 8: 271-282. PMID 22242798 DOI: 10.2174/157340912803519598  0.04
2012 Vyas VK, Ukawala RD, Ghate M, Chintha C. Homology modeling a fast tool for drug discovery: Current perspectives Indian Journal of Pharmaceutical Sciences. 74: 1-17. DOI: 10.4103/0250-474X.102537  0.04
2012 Vyas VK, Ghate M. 2D and 3D QSAR study on amino nicotinic acid and isonicotinic acid derivatives as potential inhibitors of dihydroorotate dehydrogenase (DHODH) Medicinal Chemistry Research. 21: 3021-3034. DOI: 10.1007/s00044-011-9837-4  0.04
2012 Vyas VK, Ghate M. QSAR analysis on inhibitors of human dihydroorotate dehydrogenase (hDHODH): The aryl carboxylic acid amide derivatives Indian Journal of Chemistry - Section B Organic and Medicinal Chemistry. 51: 1749-1760.  0.04
2011 Vyas VK, Ghate M. Recent developments in the medicinal chemistry and therapeutic potential of dihydroorotate dehydrogenase (DHODH) inhibitors Mini-Reviews in Medicinal Chemistry. 11: 1039-1055. PMID 21861807 DOI: 10.2174/138955711797247707  0.04
2011 Vyas VK, Bhandari P, Patidar R. A comprehensive review on Withania somnifera dunal Journal of Natural Remedies. 11: 1-13.  0.04
2011 Vyas VK, Joshib G, Namdeob B, Guptab A. Exploring structure indenture of some aminopyrazolopyridine ureas as potent VEGFR/PDGFR multitargeted kinase inhibitors: A QSAR approach Indian Journal of Chemistry - Section B Organic and Medicinal Chemistry. 50: 858-867.  0.04
2010 Vyas VK, Ghate M. Substituted benzimidazole derivatives as angiotensin II -AT1 receptor antagonist: A review Mini-Reviews in Medicinal Chemistry. 10: 1366-1384. PMID 20937029 DOI: 10.2174/138955710793564151  0.04
2010 Vyas VK, Ghate M, Ukawala RD. Recent advances in characterization of impurities - use of hyphenated LC-MS technique Current Pharmaceutical Analysis. 6: 299-306. DOI: 10.2174/157341210793292392  0.04
2009 Vyas VK, Jain A, Mahajan SC, Patidar R, Mistry S, Chaturvedi SC. Insight into the structural requirement of 2-alkyl-4-(biphenylmethoxy) quinolines as nonpeptide angiotensin II receptor antagonists: A QSAR approach Scientia Pharmaceutica. 77: 33-45. DOI: 10.3797/scipharm.0810-01  0.04
2019 Vyas VK, Bernstein DA. An Introduction to CRISPR-Mediated Genome Editing in Fungi. Journal of Microbiology & Biology Education. 20. PMID 31890080 DOI: 10.1128/Jmbe.V20I3.1809  0.01
2019 Zoppo M, Di Luca M, Franco M, Rizzato C, Lupetti A, Stringaro A, De Bernardis F, Schaudinn C, Barrasa MI, Bottai D, Vyas VK, Tavanti A. CpALS4770 and CpALS4780 contribution to the virulence of Candida parapsilosis. Microbiological Research. 231: 126351. PMID 31707298 DOI: 10.1016/J.Micres.2019.126351  0.01
2019 Zoppo M, Luca MD, Villarreal SN, Poma N, Barrasa MI, Bottai D, Vyas VK, Tavanti A. A CRISPR/Cas9-based strategy to simultaneously inactivate the entire gene family in . Future Microbiology. PMID 31659913 DOI: 10.2217/Fmb-2019-0168  0.01
2019 Mertens S, Gallone B, Steensels J, Herrera-Malaver B, Cortebeek J, Nolmans R, Saels V, Vyas VK, Verstrepen KJ. Correction: Reducing phenolic off-flavors through CRISPR-based gene editing of the FDC1 gene in Saccharomyces cerevisiae x Saccharomyces eubayanus hybrid lager beer yeasts. Plos One. 14: e0224525. PMID 31648239 DOI: 10.1371/Journal.Pone.0224525  0.01
2019 Mertens S, Gallone B, Steensels J, Herrera-Malaver B, Cortebeek J, Nolmans R, Saels V, Vyas VK, Verstrepen KJ. Reducing phenolic off-flavors through CRISPR-based gene editing of the FDC1 gene in Saccharomyces cerevisiae x Saccharomyces eubayanus hybrid lager beer yeasts. Plos One. 14: e0209124. PMID 30625138 DOI: 10.1371/journal.pone.0209124  0.01
2018 Evans BA, Pickerill ES, Vyas VK, Bernstein DA. CRISPR-mediated Genome Editing of the Human Fungal Pathogen Candida albicans. Journal of Visualized Experiments : Jove. PMID 30507925 DOI: 10.3791/58764  0.01
2018 Vyas VK, Bushkin GG, Bernstein DA, Getz MA, Sewastianik M, Barrasa MI, Bartel DP, Fink GR. New CRISPR Mutagenesis Strategies Reveal Variation in Repair Mechanisms among Fungi. Msphere. 3. PMID 29695624 DOI: 10.1128/mSphere.00154-18  0.01
2018 Veri AO, Miao Z, Shapiro RS, Tebbji F, O'Meara TR, Kim SH, Colazo J, Tan K, Vyas VK, Whiteway M, Robbins N, Wong KH, Cowen LE. Tuning Hsf1 levels drives distinct fungal morphogenetic programs with depletion impairing Hsp90 function and overexpression expanding the target space. Plos Genetics. 14: e1007270. PMID 29590106 DOI: 10.1371/Journal.Pgen.1007270  0.01
2016 Vyas VK, Sampath Kumar A, Singh SP, Pyare R. Effect of Cobalt Oxide Substitution on Mechanical Behaviour and Elastic Properties of Bioactive Glass and Glass-Ceramics Transactions of the Indian Ceramic Society. 1-8. DOI: 10.1080/0371750X.2016.1149098  0.01
2016 Vyas VK, Bhanage BM. Asymmetric transfer hydrogenation of seven membered tricyclic ketones:: N -substituted dibenzo [b, e] azepine-6,11-dione driven by nonclassical CH/O interactions Organic Chemistry Frontiers. 3: 614-619. DOI: 10.1039/C6Qo00036C  0.01
2015 Vyas VK, Barrasa MI, Fink GR. A Candida albicans CRISPR system permits genetic engineering of essential genes and gene families. Science Advances. 1: e1500248. PMID 25977940 DOI: 10.1126/sciadv.1500248  0.01
2015 Arepalli SK, Tripathi H, Vyas VK, Jain S, Suman SK, Pyare R, Singh SP. Influence of barium substitution on bioactivity, thermal and physico-mechanical properties of bioactive glass. Materials Science & Engineering. C, Materials For Biological Applications. 49: 549-59. PMID 25686983 DOI: 10.1016/j.msec.2015.01.049  0.01
2015 Selvan M, Rao MS, Kharb I, Thirumalachari S, Vyas VK, Neelakandan S. Experimental analysis of simplex atomizer spray and swirling flow interactions in unconfined conditions Asme 2015 Gas Turbine India Conference, Gtindia 2015. DOI: 10.1115/GTINDIA2015-1347  0.01
2015 Vyas VK, Kumar AS, Sunil P, Singh SP, Pyare R. Bioactivity and mechanical behaviour of cobalt oxide-doped bioactive glass Bulletin of Materials Science. 38: 957-964.  0.01
2014 Govindaraj M, Suryanarayana MH, Vyas VK, Rajendran J, Natarajan R, Pradhan A, Perdoor C, Pattil P, Sameer M. Axial and radial variation of spray characteristics of a small-scale simplex atomizer Asme 2014 Gas Turbine India Conference, Gtindia 2014. DOI: 10.1115/GTINDIA2014-8148  0.01
2013 Govindaraj MS, Rao MHS, Vyas VK, Shanmugasundaram K, Venugopal N, Sankar K. Effect of inlet tangential port area on droplet size distribution of small-scale simplex atomizer Asme 2013 Gas Turbine India Conference, Gtindia 2013. DOI: 10.1115/GTINDIA2013-3549  0.01
2010 Yadav RK, Purohit SD, Vyas VK. On transformations involving generalized basic hypergeometric function of two variables Revista Tecnica De La Facultad De Ingenieria Universidad Del Zulia. 33: 176-182.  0.01
2005 Park S, Kelly R, Kahn JN, Robles J, Hsu MJ, Register E, Li W, Vyas V, Fan H, Abruzzo G, Flattery A, Gill C, Chrebet G, Parent SA, Kurtz M, et al. Specific substitutions in the echinocandin target Fks1p account for reduced susceptibility of rare laboratory and clinical Candida sp. isolates. Antimicrobial Agents and Chemotherapy. 49: 3264-73. PMID 16048935 DOI: 10.1128/Aac.49.8.3264-3273.2005  0.01
1997 Vyas VK, Kothari S, Banerji KK. Correlation analysis of structure and reactivity in the oxidation of substituted benzyl alcohols bybis(2,2′-bipyridyl) copper(II) permanganate International Journal of Chemical Kinetics. 29: 9-16.  0.01
1996 Vyas VK, Jalani N, Kothari S, Banerji KK. Kinetics and Mechanism of the Oxidation of Organic Sulfides by Pyridinium Hydrobromide Perbromide Journal of Chemical Research - Part S. 370-371.  0.01
1996 Vyas VK, Kothari S, Banerji KK. Kinetics and mechanism of oxidation of aliphatic aldehydes by N-bromobenzamide Indian Journal of Chemistry - Section a Inorganic, Physical, Theoretical and Analytical Chemistry. 35: 112-115.  0.01
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