Dwayne A. Elias, Ph.D. - Publications

Affiliations: 
2002 University of Oklahoma, Norman, OK, United States 
Area:
Microbiology Biology, Environmental Engineering

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Kurczy ME, Forsberg EM, Thorgersen MP, Poole FL, Benton HP, Ivanisevic J, Tran ML, Wall JD, Elias DA, Adams MW, Siuzdak G. Global Isotope Metabolomics Reveals Adaptive Strategies for Nitrogen Assimilation in Pseudomonas. Acs Chemical Biology. PMID 27045776 DOI: 10.1021/Acschembio.6B00082  0.6
2016 Lu X, Liu Y, Johs A, Zhao L, Wang T, Yang Z, Lin H, Elias DA, Pierce EM, Liang L, Barkay T, Gu B. Anaerobic Mercury Methylation and Demethylation by Geobacter bemidjiensis Bem. Environmental Science & Technology. PMID 27019098 DOI: 10.1021/Acs.Est.6B00401  0.6
2016 Shatsky M, Allen S, Gold BL, Liu NL, Juba TR, Reveco SA, Elias DA, Prathapam R, He J, Yang W, Szakal ED, Liu H, Singer ME, Geller JT, Lam BR, et al. Bacterial interactomes: interacting protein partners share similar function and are validated in independent assays more frequently than previously reported. Molecular & Cellular Proteomics : McP. PMID 26873250 DOI: 10.1074/Mcp.M115.054692  0.6
2015 Smith MB, Rocha AM, Smillie CS, Olesen SW, Paradis C, Wu L, Campbell JH, Fortney JL, Mehlhorn TL, Lowe KA, Earles JE, Phillips J, Techtmann SM, Joyner DC, Elias DA, et al. Natural bacterial communities serve as quantitative geochemical biosensors. Mbio. 6: e00326-15. PMID 25968645 DOI: 10.1128/Mbio.00326-15  0.6
2015 Smith SD, Bridou R, Johs A, Parks JM, Elias DA, Hurt RA, Brown SD, Podar M, Wall JD. Site-directed mutagenesis of HgcA and HgcB reveals amino acid residues important for mercury methylation. Applied and Environmental Microbiology. 81: 3205-17. PMID 25724962 DOI: 10.1128/Aem.00217-15  0.6
2015 Roy Chowdhury T, Herndon EM, Phelps TJ, Elias DA, Gu B, Liang L, Wullschleger SD, Graham DE. Stoichiometry and temperature sensitivity of methanogenesis and CO2 production from saturated polygonal tundra in Barrow, Alaska. Global Change Biology. 21: 722-37. PMID 25308891 DOI: 10.1111/Gcb.12762  0.6
2015 Xu X, Elias DA, Graham DE, Phelps TJ, Carroll SL, Wullschleger SD, Thornton PE. A microbial functional group-based module for simulating methane production and consumption: Application to an incubated permafrost soil Journal of Geophysical Research G: Biogeosciences. 120: 1315-1333. DOI: 10.1002/2015Jg002935  0.6
2014 Hurt RA, Robeson MS, Shakya M, Moberly JG, Vishnivetskaya TA, Gu B, Elias DA. Improved yield of high molecular weight DNA coincides with increased microbial diversity access from iron oxide cemented sub-surface clay environments. Plos One. 9: e102826. PMID 25033199 DOI: 10.1371/Journal.Pone.0102826  0.6
2014 Lancaster WA, Menon AL, Scott I, Poole FL, Vaccaro BJ, Thorgersen MP, Geller J, Hazen TC, Hurt RA, Brown SD, Elias DA, Adams MW. Metallomics of two microorganisms relevant to heavy metal bioremediation reveal fundamental differences in metal assimilation and utilization. Metallomics : Integrated Biometal Science. 6: 1004-13. PMID 24706256 DOI: 10.1039/C4Mt00050A  0.6
2014 Lin H, Hurt RA, Johs A, Parks JM, Morrell-Falvey JL, Liang L, Elias DA, Gu B. Unexpected Effects of Gene Deletion on Interactions of Mercury with the Methylation-Deficient Mutant ΔhgcAB Environmental Science and Technology Letters. 1: 271-276. DOI: 10.1021/Ez500107R  0.6
2013 Somenahally AC, Mosher JJ, Yuan T, Podar M, Phelps TJ, Brown SD, Yang ZK, Hazen TC, Arkin AP, Palumbo AV, Van Nostrand JD, Zhou J, Elias DA. Hexavalent chromium reduction under fermentative conditions with lactate stimulated native microbial communities. Plos One. 8: e83909. PMID 24376771 DOI: 10.1371/Journal.Pone.0083909  0.6
2013 Gilmour CC, Podar M, Bullock AL, Graham AM, Brown SD, Somenahally AC, Johs A, Hurt RA, Bailey KL, Elias DA. Mercury methylation by novel microorganisms from new environments. Environmental Science & Technology. 47: 11810-20. PMID 24024607 DOI: 10.1021/Es403075T  0.6
2013 Hu H, Lin H, Zheng W, Rao B, Feng X, Liang L, Elias DA, Gu B. Mercury reduction and cell-surface adsorption by Geobacter sulfurreducens PCA. Environmental Science & Technology. 47: 10922-30. PMID 24020841 DOI: 10.1021/Es400527M  0.6
2013 Parks JM, Johs A, Podar M, Bridou R, Hurt RA, Smith SD, Tomanicek SJ, Qian Y, Brown SD, Brandt CC, Palumbo AV, Smith JC, Wall JD, Elias DA, Liang L. The genetic basis for bacterial mercury methylation. Science (New York, N.Y.). 339: 1332-5. PMID 23393089 DOI: 10.1126/Science.1230667  0.6
2013 Hu H, Lin H, Zheng W, Tomanicek SJ, Johs A, Feng X, Elias DA, Liang L, Gu B. Oxidation and methylation of dissolved elemental mercury by anaerobic bacteria Nature Geoscience. 6: 751-754. DOI: 10.1038/Ngeo1894  0.6
2012 Brown SD, Podar M, Klingeman DM, Johnson CM, Yang ZK, Utturkar SM, Land ML, Mosher JJ, Hurt RA, Phelps TJ, Palumbo AV, Arkin AP, Hazen TC, Elias DA. Draft genome sequences for two metal-reducing Pelosinus fermentans strains isolated from a Cr(VI)-contaminated site and for type strain R7. Journal of Bacteriology. 194: 5147-8. PMID 22933770 DOI: 10.1128/Jb.01174-12  0.6
2012 Graham AM, Bullock AL, Maizel AC, Elias DA, Gilmour CC. Detailed assessment of the kinetics of Hg-cell association, Hg methylation, and methylmercury degradation in several Desulfovibrio species. Applied and Environmental Microbiology. 78: 7337-46. PMID 22885751 DOI: 10.1128/Aem.01792-12  0.6
2012 Hurt RA, Brown SD, Podar M, Palumbo AV, Elias DA. Sequencing intractable DNA to close microbial genomes. Plos One. 7: e41295. PMID 22859974 DOI: 10.1371/Journal.Pone.0041295  0.6
2012 Begemann MB, Mormile MR, Sitton OC, Wall JD, Elias DA. A Streamlined Strategy for Biohydrogen Production with Halanaerobium hydrogeniformans, an Alkaliphilic Bacterium. Frontiers in Microbiology. 3: 93. PMID 22509174 DOI: 10.3389/Fmicb.2012.00093  0.6
2012 Moberly JG, Miller CL, Brown SD, Biswas A, Brandt CC, Palumbo AV, Elias DA. Role of morphological growth state and gene expression in Desulfovibrio africanus strain Walvis Bay mercury methylation. Environmental Science & Technology. 46: 4926-32. PMID 22500779 DOI: 10.1021/Es3000933  0.6
2012 Mosher JJ, Phelps TJ, Podar M, Hurt RA, Campbell JH, Drake MM, Moberly JG, Schadt CW, Brown SD, Hazen TC, Arkin AP, Palumbo AV, Faybishenko BA, Elias DA. Microbial community succession during lactate amendment and electron acceptor limitation reveals a predominance of metal-reducing Pelosinus spp. Applied and Environmental Microbiology. 78: 2082-91. PMID 22267668 DOI: 10.1128/Aem.07165-11  0.6
2012 Graham DE, Wallenstein MD, Vishnivetskaya TA, Waldrop MP, Phelps TJ, Pfiffner SM, Onstott TC, Whyte LG, Rivkina EM, Gilichinsky DA, Elias DA, Mackelprang R, VerBerkmoes NC, Hettich RL, Wagner D, et al. Microbes in thawing permafrost: the unknown variable in the climate change equation. The Isme Journal. 6: 709-12. PMID 22094350 DOI: 10.1038/Ismej.2011.163  0.6
2012 Mosher JJ, Vishnivetskaya TA, Elias DA, Podar M, Brooks SC, Brown SD, Brandt CC, Palumbo AV. Characterization of the Deltaproteobacteria in contaminated and uncontaminated stream sediments and identification of potential mercury methylators Aquatic Microbial Ecology. 66: 271-282. DOI: 10.3354/Ame01563  0.6
2011 Chhabra SR, Butland G, Elias DA, Chandonia JM, Fok OY, Juba TR, Gorur A, Allen S, Leung CM, Keller KL, Reveco S, Zane GM, Semkiw E, Prathapam R, Gold B, et al. Generalized schemes for high-throughput manipulation of the Desulfovibrio vulgaris genome. Applied and Environmental Microbiology. 77: 7595-604. PMID 21908633 DOI: 10.1128/Aem.05495-11  0.6
2011 Brown SD, Wall JD, Kucken AM, Gilmour CC, Podar M, Brandt CC, Teshima H, Detter JC, Han CS, Land ML, Lucas S, Han J, Pennacchio L, Nolan M, Pitluck S, ... ... Elias DA, et al. Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay. Journal of Bacteriology. 193: 4037-8. PMID 21642452 DOI: 10.1128/Jb.05223-11  0.6
2011 Brown SD, Begemann MB, Mormile MR, Wall JD, Han CS, Goodwin LA, Pitluck S, Land ML, Hauser LJ, Elias DA. Complete genome sequence of the haloalkaliphilic, hydrogen-producing bacterium Halanaerobium hydrogeniformans. Journal of Bacteriology. 193: 3682-3. PMID 21602336 DOI: 10.1128/Jb.05209-11  0.6
2011 Gilmour CC, Elias DA, Kucken AM, Brown SD, Palumbo AV, Schadt CW, Wall JD. Sulfate-reducing bacterium Desulfovibrio desulfuricans ND132 as a model for understanding bacterial mercury methylation. Applied and Environmental Microbiology. 77: 3938-51. PMID 21515733 DOI: 10.1128/Aem.02993-10  0.6
2011 Brown SD, Gilmour CC, Kucken AM, Wall JD, Elias DA, Brandt CC, Podar M, Chertkov O, Held B, Bruce DC, Detter JC, Tapia R, Han CS, Goodwin LA, Cheng JF, et al. Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132. Journal of Bacteriology. 193: 2078-9. PMID 21357488 DOI: 10.1128/Jb.00170-11  0.6
2011 Vishnivetskaya TA, Mosher JJ, Palumbo AV, Yang ZK, Podar M, Brown SD, Brooks SC, Gu B, Southworth GR, Drake MM, Brandt CC, Elias DA. Mercury and other heavy metals influence bacterial community structure in contaminated Tennessee streams. Applied and Environmental Microbiology. 77: 302-11. PMID 21057024 DOI: 10.1128/Aem.01715-10  0.6
2009 Elias DA, Mukhopadhyay A, Joachimiak MP, Drury EC, Redding AM, Yen HC, Fields MW, Hazen TC, Arkin AP, Keasling JD, Wall JD. Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation. Nucleic Acids Research. 37: 2926-39. PMID 19293273 DOI: 10.1093/Nar/Gkp164  0.6
2009 Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, In SC, Byung HK, Kyung SK, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, ... ... Elias DA, et al. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms (Proceedings of the National Academy of Sciences of the United States of America (2006) 103, 30, (11358-11363) DOI 10.1073/pnas.0604517103) Proceedings of the National Academy of Sciences of the United States of America. 106: 9535. DOI: 10.1073/Pnas.0903426106  0.6
2008 Elias DA, Tollaksen SL, Kennedy DW, Mottaz HM, Giometti CS, McLean JS, Hill EA, Pinchuk GE, Lipton MS, Fredrickson JK, Gorby YA. The influence of cultivation methods on Shewanella oneidensis physiology and proteome expression. Archives of Microbiology. 189: 313-24. PMID 18030449 DOI: 10.1007/S00203-007-0321-Y  0.6
2007 Elias DA, Yang F, Mottaz HM, Beliaev AS, Lipton MS. Enrichment of functional redox reactive proteins and identification by mass spectrometry results in several terminal Fe(III)-reducing candidate proteins in Shewanella oneidensis MR-1. Journal of Microbiological Methods. 68: 367-75. PMID 17137661 DOI: 10.1016/J.Mimet.2006.09.023  0.6
2006 Lipton MS, Romine MF, Monroe ME, Elias DA, Pasa-Tolic L, Anderson GA, Anderson DJ, Fredrickson J, Hixson KK, Masselon C, Mottaz H, Tolic N, Smith RD. AMT tag approach to proteomic characterization of Deinococcus radiodurans and Shewanella oneidensis. Methods of Biochemical Analysis. 49: 113-34. PMID 16929677 DOI: 10.1002/0471973165.Ch9  0.6
2006 Norbeck AD, Callister SJ, Monroe ME, Jaitly N, Elias DA, Lipton MS, Smith RD. Proteomic approaches to bacterial differentiation. Journal of Microbiological Methods. 67: 473-86. PMID 16919344 DOI: 10.1016/J.Mimet.2006.04.024  0.6
2006 Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, Chang IS, Kim BH, Kim KS, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, ... ... Elias DA, et al. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms. Proceedings of the National Academy of Sciences of the United States of America. 103: 11358-63. PMID 16849424 DOI: 10.1073/Pnas.0604517103  0.6
2006 Shi L, Chen B, Wang Z, Elias DA, Mayer MU, Gorby YA, Ni S, Lower BH, Kennedy DW, Wunschel DS, Mottaz HM, Marshall MJ, Hill EA, Beliaev AS, Zachara JM, et al. Isolation of a high-affinity functional protein complex between OmcA and MtrC: Two outer membrane decaheme c-type cytochromes of Shewanella oneidensis MR-1. Journal of Bacteriology. 188: 4705-14. PMID 16788180 DOI: 10.1128/Jb.01966-05  0.6
2006 Elias DA, Monroe ME, Smith RD, Fredrickson JK, Lipton MS. Confirmation of the expression of a large set of conserved hypothetical proteins in Shewanella oneidensis MR-1. Journal of Microbiological Methods. 66: 223-33. PMID 16417935 DOI: 10.1016/J.Mimet.2005.11.009  0.6
2006 Fang R, Elias DA, Monroe ME, Shen Y, McIntosh M, Wang P, Goddard CD, Callister SJ, Moore RJ, Gorby YA, Adkins JN, Fredrickson JK, Lipton MS, Smith RD. Differential label-free quantitative proteomic analysis of Shewanella oneidensis cultured under aerobic and suboxic conditions by accurate mass and time tag approach. Molecular & Cellular Proteomics : McP. 5: 714-25. PMID 16401633 DOI: 10.1074/Mcp.M500301-Mcp200  0.6
2005 Elias DA, Monroe ME, Marshall MJ, Romine MF, Belieav AS, Fredrickson JK, Anderson GA, Smith RD, Lipton MS. Global detection and characterization of hypothetical proteins in Shewanella oneidensis MR-1 using LC-MS based proteomics. Proteomics. 5: 3120-30. PMID 16038018 DOI: 10.1002/Pmic.200401140  0.6
2005 Yang F, Bogdanov B, Strittmatter EF, Vilkov AN, Gritsenko M, Shi L, Elias DA, Ni S, Romine M, Pasa-Tolić L, Lipton MS, Smith RD. Characterization of purified c-type heme-containing peptides and identification of c-type heme-attachment sites in Shewanella oneidenis cytochromes using mass spectrometry. Journal of Proteome Research. 4: 846-54. PMID 15952731 DOI: 10.1021/Pr0497475  0.6
2005 Kolker E, Picone AF, Galperin MY, Romine MF, Higdon R, Makarova KS, Kolker N, Anderson GA, Qiu X, Auberry KJ, Babnigg G, Beliaev AS, Edlefsen P, Elias DA, Gorby YA, et al. Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations. Proceedings of the National Academy of Sciences of the United States of America. 102: 2099-104. PMID 15684069 DOI: 10.1073/Pnas.0409111102  0.6
2005 Lipton MS, Romine MF, Monroe ME, Elias DA, Pasa-Tolic L, Anderson GA, Anderson DJ, Fredrickson J, Hixson KK, Masselon C, Mattaz H, Tolic N, Smith RD. AMT Tag Approach to Proteomic Characterization of Deinococcus Radiodurans and Shewanella Oneidensis Methods of Biochemical Analysis. 51: 113-134.  0.6
2004 Romine MF, Elias DA, Monroe ME, Auberry K, Fang R, Fredrickson JK, Anderson GA, Smith RD, Lipton MS. Validation of Shewanella oneidensis MR-1 small proteins by AMT tag-based proteome analysis. Omics : a Journal of Integrative Biology. 8: 239-54. PMID 15669716 DOI: 10.1089/Omi.2004.8.239  0.6
2004 Elias DA, Suflita JM, McInerney MJ, Krumholz LR. Periplasmic cytochrome c3 of Desulfovibrio vulgaris is directly involved in H2-mediated metal but not sulfate reduction. Applied and Environmental Microbiology. 70: 413-20. PMID 14711670 DOI: 10.1128/Aem.70.1.413-420.2004  0.6
2003 Elias DA, Krumholz LR, Wong D, Long PE, Suflita JM. Characterization of microbial activities and U reduction in a shallow aquifer contaminated by uranium mill tailings. Microbial Ecology. 46: 83-91. PMID 12754659 DOI: 10.1007/S00248-002-1060-X  0.6
2003 Elias DA, Senko JM, Krumholz LR. A procedure for quantitation of total oxidized uranium for bioremediation studies. Journal of Microbiological Methods. 53: 343-53. PMID 12689712 DOI: 10.1016/S0167-7012(02)00252-X  0.6
2003 Krumholz LR, Elias DA, Suflita JM. Immobilization of cobalt by sulfate-reducing bacteria in subsurface sediments Geomicrobiology Journal. 20: 61-72. DOI: 10.1080/01490450303892  0.6
2000 Elias DA, Juck DF, Berry KA, Sparling R. Purification of the NADP+:F420 oxidoreductase of Methanosphaera stadtmanae. Canadian Journal of Microbiology. 46: 998-1003. PMID 11109487 DOI: 10.1139/W00-090  0.6
1999 Elias DA, Krumholz LR, Tanner RS, Suflita JM. Estimation of methanogen biomass by quantitation of coenzyme M. Applied and Environmental Microbiology. 65: 5541-5. PMID 10584015 DOI: 10.1128/Aem.65.12.5541-5545.1999  0.6
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