Year |
Citation |
Score |
2020 |
Moon JW, Paradis CJ, Joyner DC, von Netzer F, Majumder EL, Dixon ER, Podar M, Ge X, Walian PJ, Smith HJ, Wu X, Zane GM, Walker KF, Thorgersen MP, Poole Ii FL, ... ... Elias DA, et al. Characterization of subsurface media from locations up- and down-gradient of a uranium-contaminated aquifer. Chemosphere. 255: 126951. PMID 32417512 DOI: 10.1016/J.Chemosphere.2020.126951 |
0.354 |
|
2019 |
Zelaya AJ, Parker AE, Bailey KL, Zhang P, Van Nostrand J, Ning D, Elias DA, Zhou J, Hazen TC, Arkin AP, Fields MW. High spatiotemporal variability of bacterial diversity over short time scales with unique hydrochemical associations within a shallow aquifer. Water Research. 164: 114917. PMID 31387058 DOI: 10.1016/J.Watres.2019.114917 |
0.311 |
|
2019 |
Christensen GA, Gionfriddo CM, King AJ, Moberly JG, Miller CL, Somenahally AC, Callister SJ, Brewer H, Podar M, Brown SD, Palumbo AV, Brandt CC, Wymore AM, Brooks SC, Hwang C, ... ... Elias DA, et al. Determining the Reliability of Measuring Mercury Cycling Gene Abundance with Correlations with Mercury and Methylmercury Concentrations. Environmental Science & Technology. PMID 31260289 DOI: 10.1021/Acs.Est.8B06389 |
0.393 |
|
2018 |
Smith HJ, Zelaya AJ, De León KB, Chakraborty R, Elias DA, Hazen TC, Arkin AP, Cunningham AB, Fields MW. Impact of hydrologic boundaries on microbial planktonic and biofilm communities in shallow terrestrial subsurface environments. Fems Microbiology Ecology. PMID 30265315 DOI: 10.1093/Femsec/Fiy191 |
0.32 |
|
2018 |
Paradis CJ, Moon JW, Elias DA, McKay LD, Hazen TC. In situ decay of polyfluorinated benzoic acids under anaerobic conditions. Journal of Contaminant Hydrology. PMID 30201555 DOI: 10.1016/J.Jconhyd.2018.08.009 |
0.317 |
|
2018 |
Qian C, Chen H, Johs A, Lu X, An J, Pierce EM, Parks JM, Elias DA, Hettich RL, Gu B. Quantitative Proteomic Analysis of Biological Processes and Responses of the Bacterium Desulfovibrio desulfuricans ND132 upon Deletion of its Mercury Methylation Genes. Proteomics. e1700479. PMID 30009483 DOI: 10.1002/Pmic.201700479 |
0.376 |
|
2018 |
Ndu U, Christensen GA, Rivera NA, Gionfriddo CM, Deshusses MA, Elias DA, Hsu-Kim H. Quantification of Mercury Bioavailability for Methylation Using Diffusive Gradient in Thin-Film Samplers. Environmental Science & Technology. PMID 29920204 DOI: 10.1021/Acs.Est.8B00647 |
0.384 |
|
2018 |
Gilmour CC, Bullock AL, McBurney A, Podar M, Elias DA. Robust Mercury Methylation across Diverse Methanogenic Archaea. Mbio. 9. PMID 29636434 DOI: 10.1128/Mbio.02403-17 |
0.389 |
|
2018 |
Christensen GA, Moon J, Veach AM, Mosher JJ, Wymore AM, van Nostrand JD, Zhou J, Hazen TC, Arkin AP, Elias DA. Use of in-field bioreactors demonstrate groundwater filtration influences planktonic bacterial community assembly, but not biofilm composition. Plos One. 13: e0194663. PMID 29558522 DOI: 10.1371/Journal.Pone.0194663 |
0.311 |
|
2018 |
Vishnivetskaya TA, Hu H, Van Nostrand JD, Wymore AM, Xu X, Qiu G, Feng X, Zhou J, Brown SD, Brandt CC, Podar M, Gu B, Elias DA. Microbial community structure with trends in methylation gene diversity and abundance in mercury-contaminated rice paddy soils in Guizhou, China. Environmental Science. Processes & Impacts. PMID 29504614 DOI: 10.1039/C7Em00558J |
0.372 |
|
2018 |
He Z, Zhang P, Wu L, Rocha AM, Tu Q, Shi Z, Wu B, Qin Y, Wang J, Yan Q, Curtis D, Ning D, Van Nostrand JD, Wu L, Yang Y, ... Elias DA, et al. Microbial Functional Gene Diversity Predicts Groundwater Contamination and Ecosystem Functioning. Mbio. 9. PMID 29463661 DOI: 10.1128/Mbio.02435-17 |
0.322 |
|
2017 |
Christensen GA, Somenahally AC, Moberly JG, Miller CM, King AJ, Gilmour CC, Brown SD, Podar M, Brandt CC, Brooks SC, Palumbo AV, Wall JD, Elias DA. Carbon Amendments Alter Microbial Community Structure and Net Mercury Methylation Potential in Sediments. Applied and Environmental Microbiology. PMID 29150503 DOI: 10.1128/Aem.01049-17 |
0.419 |
|
2017 |
King AJ, Preheim SP, Bailey KL, Robeson MS, Roy Chowdhury T, Crable BR, Hurt RA, Mehlhorn TL, Lowe KA, Phelps TJ, Palumbo AV, Brandt CC, Brown SD, Podar M, Zhang P, ... ... Elias DA, et al. Temporal Dynamics of In-Field Bioreactor Populations Reflect the Groundwater System and Respond Predictably to Perturbation. Environmental Science & Technology. PMID 28112946 DOI: 10.1021/Acs.Est.6B04751 |
0.334 |
|
2016 |
Christensen GA, Wymore AM, King AJ, Podar M, Hurt RA, Santillan EU, Soren A, Brandt CC, Brown SD, Palumbo AV, Wall JD, Gilmour CC, Elias DA. Development and Validation of Broad-Range Qualitative and Clade-Specific Quantitative Molecular Probes for Assessing Mercury Methylation in the Environment. Applied and Environmental Microbiology. PMID 27422835 DOI: 10.1128/Aem.01271-16 |
0.398 |
|
2016 |
Kurczy ME, Forsberg EM, Thorgersen MP, Poole FL, Benton HP, Ivanisevic J, Tran ML, Wall JD, Elias DA, Adams MW, Siuzdak G. Global Isotope Metabolomics Reveals Adaptive Strategies for Nitrogen Assimilation in Pseudomonas. Acs Chemical Biology. PMID 27045776 DOI: 10.1021/Acschembio.6B00082 |
0.321 |
|
2016 |
Lu X, Liu Y, Johs A, Zhao L, Wang T, Yang Z, Lin H, Elias DA, Pierce EM, Liang L, Barkay T, Gu B. Anaerobic Mercury Methylation and Demethylation by Geobacter bemidjiensis Bem. Environmental Science & Technology. PMID 27019098 DOI: 10.1021/Acs.Est.6B00401 |
0.396 |
|
2015 |
Podar M, Gilmour CC, Brandt CC, Soren A, Brown SD, Crable BR, Palumbo AV, Somenahally AC, Elias DA. Global prevalence and distribution of genes and microorganisms involved in mercury methylation. Science Advances. 1: e1500675. PMID 26601305 DOI: 10.1126/Sciadv.1500675 |
0.386 |
|
2015 |
De León KB, Utturkar SM, Camilleri LB, Elias DA, Arkin AP, Fields MW, Brown SD, Wall JD. Complete Genome Sequence of Pelosinus fermentans JBW45, a Member of a Remarkably Competitive Group of Negativicutes in the Firmicutes Phylum. Genome Announcements. 3. PMID 26404608 DOI: 10.1128/Genomea.01090-15 |
0.309 |
|
2015 |
Smith MB, Rocha AM, Smillie CS, Olesen SW, Paradis C, Wu L, Campbell JH, Fortney JL, Mehlhorn TL, Lowe KA, Earles JE, Phillips J, Techtmann SM, Joyner DC, Elias DA, et al. Natural bacterial communities serve as quantitative geochemical biosensors. Mbio. 6: e00326-15. PMID 25968645 DOI: 10.1128/Mbio.00326-15 |
0.345 |
|
2015 |
Smith SD, Bridou R, Johs A, Parks JM, Elias DA, Hurt RA, Brown SD, Podar M, Wall JD. Site-directed mutagenesis of HgcA and HgcB reveals amino acid residues important for mercury methylation. Applied and Environmental Microbiology. 81: 3205-17. PMID 25724962 DOI: 10.1128/Aem.00217-15 |
0.338 |
|
2014 |
Brown SD, Utturkar SM, Magnuson TS, Ray AE, Poole FL, Lancaster WA, Thorgersen MP, Adams MW, Elias DA. Complete Genome Sequence of Pelosinus sp. Strain UFO1 Assembled Using Single-Molecule Real-Time DNA Sequencing Technology. Genome Announcements. 2. PMID 25189589 DOI: 10.1128/Genomea.00881-14 |
0.323 |
|
2014 |
Roush D, Elias D, Mormile M. Metabolic Capabilities of the Members of the Order Halanaerobiales and Their Potential Biotechnological Applications Current Biotechnology. 3: 3-9. DOI: 10.2174/221155010301140303102741 |
0.302 |
|
2014 |
Lin H, Hurt RA, Johs A, Parks JM, Morrell-Falvey JL, Liang L, Elias DA, Gu B. Unexpected Effects of Gene Deletion on Interactions of Mercury with the Methylation-Deficient Mutant ΔhgcAB Environmental Science and Technology Letters. 1: 271-276. DOI: 10.1021/Ez500107R |
0.349 |
|
2013 |
Gilmour CC, Podar M, Bullock AL, Graham AM, Brown SD, Somenahally AC, Johs A, Hurt RA, Bailey KL, Elias DA. Mercury methylation by novel microorganisms from new environments. Environmental Science & Technology. 47: 11810-20. PMID 24024607 DOI: 10.1021/Es403075T |
0.398 |
|
2013 |
Brown SD, Hurt RA, Gilmour CC, Elias DA. Draft genome sequences for three mercury-methylating, sulfate-reducing bacteria. Genome Announcements. 1. PMID 23950126 DOI: 10.1128/Genomea.00618-13 |
0.352 |
|
2013 |
Brown SD, Utturkar SM, Arkin AP, Deutschbauer AM, Elias DA, Hazen TC, Chakraborty R. Draft Genome Sequence for Desulfovibrio africanus Strain PCS. Genome Announcements. 1: e0014413. PMID 23580709 DOI: 10.1128/Genomea.00144-13 |
0.327 |
|
2013 |
Parks JM, Johs A, Podar M, Bridou R, Hurt RA, Smith SD, Tomanicek SJ, Qian Y, Brown SD, Brandt CC, Palumbo AV, Smith JC, Wall JD, Elias DA, Liang L. The genetic basis for bacterial mercury methylation. Science (New York, N.Y.). 339: 1332-5. PMID 23393089 DOI: 10.1126/Science.1230667 |
0.387 |
|
2013 |
Hu H, Lin H, Zheng W, Tomanicek SJ, Johs A, Feng X, Elias DA, Liang L, Gu B. Oxidation and methylation of dissolved elemental mercury by anaerobic bacteria Nature Geoscience. 6: 751-754. DOI: 10.1038/Ngeo1894 |
0.332 |
|
2012 |
Brown SD, Podar M, Klingeman DM, Johnson CM, Yang ZK, Utturkar SM, Land ML, Mosher JJ, Hurt RA, Phelps TJ, Palumbo AV, Arkin AP, Hazen TC, Elias DA. Draft genome sequences for two metal-reducing Pelosinus fermentans strains isolated from a Cr(VI)-contaminated site and for type strain R7. Journal of Bacteriology. 194: 5147-8. PMID 22933770 DOI: 10.1128/Jb.01174-12 |
0.318 |
|
2012 |
Graham AM, Bullock AL, Maizel AC, Elias DA, Gilmour CC. Detailed assessment of the kinetics of Hg-cell association, Hg methylation, and methylmercury degradation in several Desulfovibrio species. Applied and Environmental Microbiology. 78: 7337-46. PMID 22885751 DOI: 10.1128/Aem.01792-12 |
0.344 |
|
2012 |
Moberly JG, Miller CL, Brown SD, Biswas A, Brandt CC, Palumbo AV, Elias DA. Role of morphological growth state and gene expression in Desulfovibrio africanus strain Walvis Bay mercury methylation. Environmental Science & Technology. 46: 4926-32. PMID 22500779 DOI: 10.1021/Es3000933 |
0.39 |
|
2012 |
Mosher JJ, Phelps TJ, Podar M, Hurt RA, Campbell JH, Drake MM, Moberly JG, Schadt CW, Brown SD, Hazen TC, Arkin AP, Palumbo AV, Faybishenko BA, Elias DA. Microbial community succession during lactate amendment and electron acceptor limitation reveals a predominance of metal-reducing Pelosinus spp. Applied and Environmental Microbiology. 78: 2082-91. PMID 22267668 DOI: 10.1128/Aem.07165-11 |
0.374 |
|
2012 |
Mosher JJ, Vishnivetskaya TA, Elias DA, Podar M, Brooks SC, Brown SD, Brandt CC, Palumbo AV. Characterization of the Deltaproteobacteria in contaminated and uncontaminated stream sediments and identification of potential mercury methylators Aquatic Microbial Ecology. 66: 271-282. DOI: 10.3354/Ame01563 |
0.407 |
|
2011 |
Chhabra SR, Butland G, Elias DA, Chandonia JM, Fok OY, Juba TR, Gorur A, Allen S, Leung CM, Keller KL, Reveco S, Zane GM, Semkiw E, Prathapam R, Gold B, et al. Generalized schemes for high-throughput manipulation of the Desulfovibrio vulgaris genome. Applied and Environmental Microbiology. 77: 7595-604. PMID 21908633 DOI: 10.1128/Aem.05495-11 |
0.316 |
|
2011 |
Brown SD, Wall JD, Kucken AM, Gilmour CC, Podar M, Brandt CC, Teshima H, Detter JC, Han CS, Land ML, Lucas S, Han J, Pennacchio L, Nolan M, Pitluck S, ... ... Elias DA, et al. Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay. Journal of Bacteriology. 193: 4037-8. PMID 21642452 DOI: 10.1128/Jb.05223-11 |
0.378 |
|
2011 |
Gilmour CC, Elias DA, Kucken AM, Brown SD, Palumbo AV, Schadt CW, Wall JD. Sulfate-reducing bacterium Desulfovibrio desulfuricans ND132 as a model for understanding bacterial mercury methylation. Applied and Environmental Microbiology. 77: 3938-51. PMID 21515733 DOI: 10.1128/Aem.02993-10 |
0.38 |
|
2011 |
Brown SD, Gilmour CC, Kucken AM, Wall JD, Elias DA, Brandt CC, Podar M, Chertkov O, Held B, Bruce DC, Detter JC, Tapia R, Han CS, Goodwin LA, Cheng JF, et al. Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132. Journal of Bacteriology. 193: 2078-9. PMID 21357488 DOI: 10.1128/Jb.00170-11 |
0.366 |
|
2011 |
Vishnivetskaya TA, Mosher JJ, Palumbo AV, Yang ZK, Podar M, Brown SD, Brooks SC, Gu B, Southworth GR, Drake MM, Brandt CC, Elias DA. Mercury and other heavy metals influence bacterial community structure in contaminated Tennessee streams. Applied and Environmental Microbiology. 77: 302-11. PMID 21057024 DOI: 10.1128/Aem.01715-10 |
0.349 |
|
2010 |
Mosher JJ, Drake MM, Carroll SL, Yang ZK, Schadt CW, Brown SD, Podar M, Hazen TC, Arkin AP, Phelps TJ, Palumbo AV, Faybishenko BA, Elias DA. Microbial Community Dynamics of Lactate Enriched Hanford Groundwaters Lawrence Berkeley National Laboratory. DOI: 10.2172/986244 |
0.332 |
|
2008 |
Elias DA, Tollaksen SL, Kennedy DW, Mottaz HM, Giometti CS, McLean JS, Hill EA, Pinchuk GE, Lipton MS, Fredrickson JK, Gorby YA. The influence of cultivation methods on Shewanella oneidensis physiology and proteome expression. Archives of Microbiology. 189: 313-24. PMID 18030449 DOI: 10.1007/S00203-007-0321-Y |
0.317 |
|
2007 |
Elias DA, Yang F, Mottaz HM, Beliaev AS, Lipton MS. Enrichment of functional redox reactive proteins and identification by mass spectrometry results in several terminal Fe(III)-reducing candidate proteins in Shewanella oneidensis MR-1. Journal of Microbiological Methods. 68: 367-75. PMID 17137661 DOI: 10.1016/J.Mimet.2006.09.023 |
0.342 |
|
2006 |
Lipton MS, Romine MF, Monroe ME, Elias DA, Pasa-Tolic L, Anderson GA, Anderson DJ, Fredrickson J, Hixson KK, Masselon C, Mottaz H, Tolic N, Smith RD. AMT tag approach to proteomic characterization of Deinococcus radiodurans and Shewanella oneidensis. Methods of Biochemical Analysis. 49: 113-34. PMID 16929677 DOI: 10.1002/0471973165.Ch9 |
0.331 |
|
2006 |
Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, Chang IS, Kim BH, Kim KS, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, ... ... Elias DA, et al. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms. Proceedings of the National Academy of Sciences of the United States of America. 103: 11358-63. PMID 16849424 DOI: 10.1073/Pnas.0604517103 |
0.325 |
|
2006 |
Shi L, Chen B, Wang Z, Elias DA, Mayer MU, Gorby YA, Ni S, Lower BH, Kennedy DW, Wunschel DS, Mottaz HM, Marshall MJ, Hill EA, Beliaev AS, Zachara JM, et al. Isolation of a high-affinity functional protein complex between OmcA and MtrC: Two outer membrane decaheme c-type cytochromes of Shewanella oneidensis MR-1. Journal of Bacteriology. 188: 4705-14. PMID 16788180 DOI: 10.1128/Jb.01966-05 |
0.32 |
|
2005 |
Elias DA, Monroe ME, Marshall MJ, Romine MF, Belieav AS, Fredrickson JK, Anderson GA, Smith RD, Lipton MS. Global detection and characterization of hypothetical proteins in Shewanella oneidensis MR-1 using LC-MS based proteomics. Proteomics. 5: 3120-30. PMID 16038018 DOI: 10.1002/Pmic.200401140 |
0.333 |
|
2005 |
Kolker E, Picone AF, Galperin MY, Romine MF, Higdon R, Makarova KS, Kolker N, Anderson GA, Qiu X, Auberry KJ, Babnigg G, Beliaev AS, Edlefsen P, Elias DA, Gorby YA, et al. Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations. Proceedings of the National Academy of Sciences of the United States of America. 102: 2099-104. PMID 15684069 DOI: 10.1073/Pnas.0409111102 |
0.339 |
|
2004 |
Elias DA, Suflita JM, McInerney MJ, Krumholz LR. Periplasmic cytochrome c3 of Desulfovibrio vulgaris is directly involved in H2-mediated metal but not sulfate reduction. Applied and Environmental Microbiology. 70: 413-20. PMID 14711670 DOI: 10.1128/Aem.70.1.413-420.2004 |
0.555 |
|
2003 |
Elias DA, Krumholz LR, Wong D, Long PE, Suflita JM. Characterization of microbial activities and U reduction in a shallow aquifer contaminated by uranium mill tailings. Microbial Ecology. 46: 83-91. PMID 12754659 DOI: 10.1007/S00248-002-1060-X |
0.573 |
|
2003 |
Elias DA, Senko JM, Krumholz LR. A procedure for quantitation of total oxidized uranium for bioremediation studies. Journal of Microbiological Methods. 53: 343-53. PMID 12689712 DOI: 10.1016/S0167-7012(02)00252-X |
0.311 |
|
2003 |
Krumholz LR, Elias DA, Suflita JM. Immobilization of cobalt by sulfate-reducing bacteria in subsurface sediments Geomicrobiology Journal. 20: 61-72. DOI: 10.1080/01490450303892 |
0.552 |
|
1999 |
Elias DA, Krumholz LR, Tanner RS, Suflita JM. Estimation of methanogen biomass by quantitation of coenzyme M. Applied and Environmental Microbiology. 65: 5541-5. PMID 10584015 DOI: 10.1128/Aem.65.12.5541-5545.1999 |
0.56 |
|
Low-probability matches (unlikely to be authored by this person) |
2013 |
Hu H, Lin H, Zheng W, Rao B, Feng X, Liang L, Elias DA, Gu B. Mercury reduction and cell-surface adsorption by Geobacter sulfurreducens PCA. Environmental Science & Technology. 47: 10922-30. PMID 24020841 DOI: 10.1021/Es400527M |
0.3 |
|
2012 |
Hurt RA, Brown SD, Podar M, Palumbo AV, Elias DA. Sequencing intractable DNA to close microbial genomes. Plos One. 7: e41295. PMID 22859974 DOI: 10.1371/Journal.Pone.0041295 |
0.299 |
|
2011 |
Brown SD, Begemann MB, Mormile MR, Wall JD, Han CS, Goodwin LA, Pitluck S, Land ML, Hauser LJ, Elias DA. Complete genome sequence of the haloalkaliphilic, hydrogen-producing bacterium Halanaerobium hydrogeniformans. Journal of Bacteriology. 193: 3682-3. PMID 21602336 DOI: 10.1128/Jb.05209-11 |
0.299 |
|
2013 |
Somenahally AC, Mosher JJ, Yuan T, Podar M, Phelps TJ, Brown SD, Yang ZK, Hazen TC, Arkin AP, Palumbo AV, Van Nostrand JD, Zhou J, Elias DA. Hexavalent chromium reduction under fermentative conditions with lactate stimulated native microbial communities. Plos One. 8: e83909. PMID 24376771 DOI: 10.1371/Journal.Pone.0083909 |
0.299 |
|
2015 |
Roy Chowdhury T, Herndon EM, Phelps TJ, Elias DA, Gu B, Liang L, Wullschleger SD, Graham DE. Stoichiometry and temperature sensitivity of methanogenesis and CO2 production from saturated polygonal tundra in Barrow, Alaska. Global Change Biology. 21: 722-37. PMID 25308891 DOI: 10.1111/Gcb.12762 |
0.298 |
|
2014 |
Lancaster WA, Menon AL, Scott I, Poole FL, Vaccaro BJ, Thorgersen MP, Geller J, Hazen TC, Hurt RA, Brown SD, Elias DA, Adams MW. Metallomics of two microorganisms relevant to heavy metal bioremediation reveal fundamental differences in metal assimilation and utilization. Metallomics : Integrated Biometal Science. 6: 1004-13. PMID 24706256 DOI: 10.1039/C4Mt00050A |
0.297 |
|
2006 |
Fang R, Elias DA, Monroe ME, Shen Y, McIntosh M, Wang P, Goddard CD, Callister SJ, Moore RJ, Gorby YA, Adkins JN, Fredrickson JK, Lipton MS, Smith RD. Differential label-free quantitative proteomic analysis of Shewanella oneidensis cultured under aerobic and suboxic conditions by accurate mass and time tag approach. Molecular & Cellular Proteomics : McP. 5: 714-25. PMID 16401633 DOI: 10.1074/Mcp.M500301-Mcp200 |
0.296 |
|
2004 |
Romine MF, Elias DA, Monroe ME, Auberry K, Fang R, Fredrickson JK, Anderson GA, Smith RD, Lipton MS. Validation of Shewanella oneidensis MR-1 small proteins by AMT tag-based proteome analysis. Omics : a Journal of Integrative Biology. 8: 239-54. PMID 15669716 DOI: 10.1089/Omi.2004.8.239 |
0.295 |
|
2016 |
Lancaster WA, Utturkar SM, Poole FL, Klingeman DM, Elias DA, Adams MW, Brown SD. Near-Complete Genome Sequence of Clostridium paradoxum Strain JW-YL-7. Genome Announcements. 4. PMID 27151784 DOI: 10.1128/Genomea.00229-16 |
0.293 |
|
2009 |
Elias DA, Mukhopadhyay A, Joachimiak MP, Drury EC, Redding AM, Yen HC, Fields MW, Hazen TC, Arkin AP, Keasling JD, Wall JD. Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation. Nucleic Acids Research. 37: 2926-39. PMID 19293273 DOI: 10.1093/Nar/Gkp164 |
0.292 |
|
2006 |
Norbeck AD, Callister SJ, Monroe ME, Jaitly N, Elias DA, Lipton MS, Smith RD. Proteomic approaches to bacterial differentiation. Journal of Microbiological Methods. 67: 473-86. PMID 16919344 DOI: 10.1016/J.Mimet.2006.04.024 |
0.29 |
|
2006 |
Elias DA, Monroe ME, Smith RD, Fredrickson JK, Lipton MS. Confirmation of the expression of a large set of conserved hypothetical proteins in Shewanella oneidensis MR-1. Journal of Microbiological Methods. 66: 223-33. PMID 16417935 DOI: 10.1016/J.Mimet.2005.11.009 |
0.29 |
|
2014 |
Hurt RA, Robeson MS, Shakya M, Moberly JG, Vishnivetskaya TA, Gu B, Elias DA. Improved yield of high molecular weight DNA coincides with increased microbial diversity access from iron oxide cemented sub-surface clay environments. Plos One. 9: e102826. PMID 25033199 DOI: 10.1371/Journal.Pone.0102826 |
0.287 |
|
2016 |
Lu X, Liu Y, Johs A, Zhao L, Wang T, Yang Z, Lin H, Elias DA, Pierce EM, Liang L, Barkay T, Gu B. Response to Comment on "Anaerobic Mercury Methylation and Demethylation by Geobacter Bemidjiensis Bem". Environmental Science & Technology. PMID 27518209 DOI: 10.1021/Acs.Est.6B03687 |
0.287 |
|
2012 |
Begemann MB, Mormile MR, Sitton OC, Wall JD, Elias DA. A Streamlined Strategy for Biohydrogen Production with Halanaerobium hydrogeniformans, an Alkaliphilic Bacterium. Frontiers in Microbiology. 3: 93. PMID 22509174 DOI: 10.3389/Fmicb.2012.00093 |
0.285 |
|
2019 |
Wilpiszeski RL, Aufrecht JA, Retterer ST, Sullivan MB, Graham DE, Pierce EM, Zablocki OD, Palumbo AV, Elias DA. Soil aggregate microbial communities: Towards understanding microbiome interactions at biologically relevant scales. Applied and Environmental Microbiology. PMID 31076430 DOI: 10.1128/Aem.00324-19 |
0.279 |
|
2021 |
Carrell AA, Schwartz GE, Cregger MA, Gionfriddo CM, Elias DA, Wilpiszeski RL, Klingeman DM, Wymore AM, Muller KA, Brooks SC. Nutrient Exposure Alters Microbial Composition, Structure, and Mercury Methylating Activity in Periphyton in a Contaminated Watershed. Frontiers in Microbiology. 12: 647861. PMID 33815336 DOI: 10.3389/fmicb.2021.647861 |
0.277 |
|
2015 |
Xu X, Elias DA, Graham DE, Phelps TJ, Carroll SL, Wullschleger SD, Thornton PE. A microbial functional group-based module for simulating methane production and consumption: Application to an incubated permafrost soil Journal of Geophysical Research G: Biogeosciences. 120: 1315-1333. DOI: 10.1002/2015Jg002935 |
0.271 |
|
2018 |
Date S, Rush K, Yin X, Wall J, Ragsdale S, Parks J, Elias D, Gu B, Johs A. Discerning Mercury Methylation: Interdisciplinary Approaches to Solve a Complex Puzzle Biophysical Journal. 114: 225a. DOI: 10.1016/J.Bpj.2017.11.1255 |
0.27 |
|
2016 |
Utturkar SM, Bayer EA, Borovok I, Lamed R, Hurt RA, Land ML, Klingeman DM, Elias D, Zhou J, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, et al. Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7. Genome Announcements. 4. PMID 27688341 DOI: 10.1128/Genomea.01043-16 |
0.268 |
|
2012 |
Graham DE, Wallenstein MD, Vishnivetskaya TA, Waldrop MP, Phelps TJ, Pfiffner SM, Onstott TC, Whyte LG, Rivkina EM, Gilichinsky DA, Elias DA, Mackelprang R, VerBerkmoes NC, Hettich RL, Wagner D, et al. Microbes in thawing permafrost: the unknown variable in the climate change equation. The Isme Journal. 6: 709-12. PMID 22094350 DOI: 10.1038/Ismej.2011.163 |
0.267 |
|
2021 |
Schwartz GE, Muller KA, Rathore SS, Wilpiszeski RL, Carrell AA, Cregger MA, Elias DA, Podar M, Painter SL, Brooks SC. Incorporating concentration-dependent sediment microbial activity into methylmercury production kinetics modeling. Environmental Science. Processes & Impacts. PMID 34727150 DOI: 10.1039/d1em00287b |
0.264 |
|
2005 |
Yang F, Bogdanov B, Strittmatter EF, Vilkov AN, Gritsenko M, Shi L, Elias DA, Ni S, Romine M, Pasa-Tolić L, Lipton MS, Smith RD. Characterization of purified c-type heme-containing peptides and identification of c-type heme-attachment sites in Shewanella oneidenis cytochromes using mass spectrometry. Journal of Proteome Research. 4: 846-54. PMID 15952731 DOI: 10.1021/Pr0497475 |
0.264 |
|
2016 |
Shatsky M, Allen S, Gold BL, Liu NL, Juba TR, Reveco SA, Elias DA, Prathapam R, He J, Yang W, Szakal ED, Liu H, Singer ME, Geller JT, Lam BR, et al. Bacterial interactomes: interacting protein partners share similar function and are validated in independent assays more frequently than previously reported. Molecular & Cellular Proteomics : McP. PMID 26873250 DOI: 10.1074/Mcp.M115.054692 |
0.26 |
|
2022 |
Pierce CE, Furman OS, Nicholas SL, Wasik JC, Gionfriddo CM, Wymore AM, Sebestyen SD, Kolka RK, Mitchell CPJ, Griffiths NA, Elias DA, Nater EA, Toner BM. Role of Ester Sulfate and Organic Disulfide in Mercury Methylation in Peatland Soils. Environmental Science & Technology. 56: 1433-1444. PMID 34979084 DOI: 10.1021/acs.est.1c04662 |
0.249 |
|
2020 |
Bowman KL, Collins RE, Agather AM, Lamborg CH, Hammerschmidt CR, Kaul D, Dupont CL, Christensen GA, Elias DA. Distribution of mercury‐cycling genes in the Arctic and equatorial Pacific Oceans and their relationship to mercury speciation Limnology and Oceanography. 65. DOI: 10.1002/Lno.11310 |
0.247 |
|
2000 |
Elias DA, Juck DF, Berry KA, Sparling R. Purification of the NADP+:F420 oxidoreductase of Methanosphaera stadtmanae. Canadian Journal of Microbiology. 46: 998-1003. PMID 11109487 DOI: 10.1139/W00-090 |
0.247 |
|
2000 |
Elias DA, Juck DF, Berry KA, Sparling R. Purification of the NADP + :F 420 oxidoreductase of Methanosphaera stadtmanae Canadian Journal of Microbiology. 46: 998-1003. DOI: 10.1139/Cjm-46-11-998 |
0.246 |
|
2009 |
Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, In SC, Byung HK, Kyung SK, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, ... ... Elias DA, et al. Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms (Proceedings of the National Academy of Sciences of the United States of America (2006) 103, 30, (11358-11363) DOI 10.1073/pnas.0604517103) Proceedings of the National Academy of Sciences of the United States of America. 106: 9535. DOI: 10.1073/Pnas.0903426106 |
0.245 |
|
2021 |
Gilmour CC, Soren AB, Gionfriddo CM, Podar M, Wall JD, Brown SD, Michener JK, Urriza MSG, Elias DA. sp. nov., a mercury-methylating bacterium isolated from sediment. International Journal of Systematic and Evolutionary Microbiology. PMID 33570484 DOI: 10.1099/ijsem.0.004697 |
0.24 |
|
2021 |
Podar PT, Peyton K, Soren A, Wilpiszeski RL, Gilmour CC, Elias DA, Podar M. Complete Genome Sequence of Desulfobulbus oligotrophicus Prop6, an Anaerobic Strain That Lacks Mercury Methylation Capability. Microbiology Resource Announcements. 10. PMID 33541869 DOI: 10.1128/MRA.00002-21 |
0.238 |
|
2022 |
Capo E, Peterson BD, Kim M, Jones DS, Acinas SG, Amyot M, Bertilsson S, Björn E, Buck M, Cosio C, Elias DA, Gilmour C, Goñi Urriza MS, Gu B, Lin H, et al. A consensus protocol for the recovery of mercury methylation genes from metagenomes. Molecular Ecology Resources. PMID 35839241 DOI: 10.1111/1755-0998.13687 |
0.237 |
|
2010 |
Gorur A, Leung C, Jorgens D, Tauscher A, Remis J, Ball D, Chhabra S, Fok V, Geller J, Singer M, Hazen T, Juba T, Elias D, Wall J, Biggin M, et al. Subcellular Localization of Proteins in the Anaerobic Sulfate Reducer Desulfovibrio vulgaris via SNAP-tag Labeling and Photoconversion Microscopy and Microanalysis. 16: 864-865. DOI: 10.1017/S1431927610057727 |
0.237 |
|
2022 |
Neal-Walthall N, Ndu U, Rivera NA, Elias DA, Hsu-Kim H. Utility of Diffusive Gradient in Thin-Film Passive Samplers for Predicting Mercury Methylation Potential and Bioaccumulation in Freshwater Wetlands. Environmental Science & Technology. PMID 35044747 DOI: 10.1021/acs.est.1c06796 |
0.235 |
|
2023 |
Gionfriddo CM, Soren AB, Wymore AM, Hartnett DS, Podar M, Parks JM, Elias DA, Gilmour CC. Transcriptional Control of by an ArsR-Like Regulator in ND132. Applied and Environmental Microbiology. e0176822. PMID 36951561 DOI: 10.1128/aem.01768-22 |
0.232 |
|
2020 |
Wilpiszeski RL, Gionfriddo CM, Wymore AM, Moon JW, Lowe KA, Podar M, Rafie S, Fields MW, Hazen TC, Ge X, Poole F, Adams MWW, Chakraborty R, Fan Y, Van Nostrand JD, ... ... Elias DA, et al. In-field bioreactors demonstrate dynamic shifts in microbial communities in response to geochemical perturbations. Plos One. 15: e0232437. PMID 32986713 DOI: 10.1371/journal.pone.0232437 |
0.223 |
|
2021 |
Otwell AE, Carr AV, Majumder ELW, Ruiz MK, Wilpiszeski RL, Hoang LT, Webb B, Turkarslan S, Gibbons SM, Elias DA, Stahl DA, Siuzdak G, Baliga NS. Sulfur Metabolites Play Key System-Level Roles in Modulating Denitrification. Msystems. 6. PMID 33563788 DOI: 10.1128/mSystems.01025-20 |
0.217 |
|
1996 |
Johnston CE, Bristow GK, Elias DA, Giesbrecht GG. Alcohol lowers the vasoconstriction threshold in humans without affecting core cooling rate during mild cold exposure European Journal of Applied Physiology and Occupational Physiology. 74: 293-295. PMID 8897037 DOI: 10.1007/Bf00377453 |
0.202 |
|
2020 |
Gionfriddo CM, Wymore AM, Jones DS, Wilpiszeski RL, Lynes MM, Christensen GA, Soren A, Gilmour CC, Podar M, Elias DA. An Improved Primer Set and Direct High-Throughput Sequencing Expand Hg-Methylator Diversity in Nature. Frontiers in Microbiology. 11: 541554. PMID 33123100 DOI: 10.3389/fmicb.2020.541554 |
0.201 |
|
2021 |
Kim M, Wilpiszeski RL, Wells M, Wymore AM, Gionfriddo CM, Brooks SC, Podar M, Elias DA. Metagenome-Assembled Genome Sequences of Novel Prokaryotic Species from the Mercury-Contaminated East Fork Poplar Creek, Oak Ridge, Tennessee, USA. Microbiology Resource Announcements. 10. PMID 33927032 DOI: 10.1128/MRA.00153-21 |
0.195 |
|
2005 |
Lipton MS, Romine MF, Monroe ME, Elias DA, Pasa-Tolic L, Anderson GA, Anderson DJ, Fredrickson J, Hixson KK, Masselon C, Mattaz H, Tolic N, Smith RD. AMT Tag Approach to Proteomic Characterization of Deinococcus Radiodurans and Shewanella Oneidensis Methods of Biochemical Analysis. 51: 113-134. |
0.082 |
|
2023 |
Sobek E, Elias DA. Bipolar ionization rapidly inactivates real-world, airborne concentrations of infective respiratory viruses. Plos One. 18: e0293504. PMID 37992037 DOI: 10.1371/journal.pone.0293504 |
0.066 |
|
1996 |
Johnston CE, Elias DA, Ready AE, Giesbrecht GG. Hypercapnia lowers the shivering threshold and increases core cooling rate in humans. Aviation, Space, and Environmental Medicine. 67: 438-44. PMID 8725470 |
0.055 |
|
2012 |
Deganello A, Meacock L, Tavakkolizadeh A, Sinha J, Elias DA. The value of ultrasound in assessing displacement of a medial clavicular physeal separation in an adolescent Skeletal Radiology. 41: 857-860. DOI: 10.1007/s00256-011-1357-2 |
0.05 |
|
2010 |
Agha CA, Ibrahim S, Hassan A, Elias DA, Fathallah-Shaykh HM. Bevacizumab is active as a single agent against recurrent malignant gliomas. Anticancer Research. 30: 609-11. PMID 20332478 |
0.049 |
|
2004 |
Heffez DS, Ross RE, Shade-Zeldow Y, Kostas K, Shah S, Gottschalk R, Elias DA, Shepard A, Leurgans SE, Moore CG. Clinical evidence for cervical myelopathy due to Chiari malformation and spinal stenosis in a non-randomized group of patients with the diagnosis of fibromyalgia. European Spine Journal : Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society. 13: 516-23. PMID 15083352 DOI: 10.1007/S00586-004-0672-X |
0.042 |
|
2001 |
Elias DA, Sohaib SA, Reznek RH. Imaging of the adrenal glands Cme Journal Radiology. 2: 107-112. |
0.042 |
|
2007 |
Heffez DS, Ross RE, Shade-Zeldow Y, Kostas K, Morrissey M, Elias DA, Shepard A. Treatment of cervical myelopathy in patients with the fibromyalgia syndrome: outcomes and implications. European Spine Journal : Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society. 16: 1423-33. PMID 17426987 DOI: 10.1007/s00586-007-0366-2 |
0.041 |
|
2012 |
Tsitskaris K, Sharif K, Meacock LM, Bansal M, Ayis S, Li PL, Elias DA. The prevalence of cam-type femoroacetabular morphology in young adults and its effect on functional hip scores. Hip International : the Journal of Clinical and Experimental Research On Hip Pathology and Therapy. 22: 68-74. PMID 22383323 DOI: 10.5301/HIP.2012.9074 |
0.032 |
|
2008 |
Ravindran V, Seah MA, Elias DA, Choy EH, Scott DL, Gordon PA. Clinical and radiological features of rheumatoid arthritis in British black Africans. Clinical Rheumatology. 27: 97-100. PMID 17932617 DOI: 10.1007/s10067-007-0735-6 |
0.032 |
|
2003 |
Elias DA, White LM, Simpson DJ, Kandel RA, Tomlinson G, Bell RS, Wunder JS. Osseous invasion by soft-tissue sarcoma: assessment with MR imaging. Radiology. 229: 145-52. PMID 14519874 DOI: 10.1148/Radiol.2291020377 |
0.031 |
|
2011 |
Elias DA, McKinnon E. The role of ultrasound imaging in acute rupture of the Achilles tendon Ultrasound. 19: 70-75. DOI: 10.1258/ult.2011.011013 |
0.028 |
|
2006 |
Tamvakopoulos GS, Ayekoloye C, Elias DA, Li P. Pyogenic sacroiliitis after delivery with lower segment caesarean section Journal of Pelvic Medicine and Surgery. 12: 331-334. DOI: 10.1097/01.spv.0000245932.62401.f5 |
0.026 |
|
2004 |
Elias DA, White LM. Imaging of patellofemoral disorders Clinical Radiology. 59: 543-557. PMID 15208060 DOI: 10.1016/j.crad.2004.01.004 |
0.024 |
|
2004 |
Fithian DC, Paxton EW, Stone ML, Silva P, Davis DK, Elias DA, White LM. Epidemiology and natural history of acute patellar dislocation. The American Journal of Sports Medicine. 32: 1114-21. PMID 15262631 DOI: 10.1177/0363546503260788 |
0.023 |
|
2004 |
Green SJ, Elias DA. Sonography of soft tissue masses Radiology Now. 21: 12-16. |
0.02 |
|
2010 |
Colegate-Stone T, Allom R, Singh R, Elias DA, Standring S, Sinha J. Classification of the morphology of the acromioclavicular joint using cadaveric and radiological analysis Journal of Bone and Joint Surgery - Series B. 92: 743-746. PMID 20436015 DOI: 10.1302/0301-620X.92B5.22876 |
0.019 |
|
2014 |
Khan I, Bew D, Elias DA, Lewis D, Meacock LM. Mechanisms of injury and CT findings in bowel and mesenteric trauma. Clinical Radiology. 69: 639-47. PMID 24606835 DOI: 10.1016/j.crad.2014.01.021 |
0.016 |
|
2013 |
Elias DA, Carne A, Bethapudi S, Engebretsen L, Budgett R, O'Connor P. Imaging of plantar fascia and Achilles injuries undertaken at the London 2012 Olympics. Skeletal Radiology. 42: 1645-55. PMID 23903598 DOI: 10.1007/s00256-013-1689-1 |
0.01 |
|
2007 |
Petrova NL, Moniz C, Elias DA, Buxton-Thomas M, Bates M, Edmonds ME. Is there a systemic inflammatory response in the acute charcot foot? Diabetes Care. 30: 997-8. PMID 17392560 DOI: 10.2337/dc06-2168 |
0.01 |
|
2006 |
Stanton I, White LM, Satchithananda K, Compson J, Elias DA. The postoperative patellofemoral joint: expected radiological appearances and complications. Current Problems in Diagnostic Radiology. 35: 55-64. PMID 16517289 DOI: 10.1067/j.cpradiol.2005.12.001 |
0.01 |
|
2003 |
Elias DA, White LM, Rubenstein JD, Christakis M, Merchant N. Clinical evaluation and MR imaging features of popliteal artery entrapment and cystic adventitial disease American Journal of Roentgenology. 180: 627-632. PMID 12591664 |
0.01 |
|
2003 |
Soh V, Elias DA, Bleakney R. Sonography of the fingers Radiology Now. 20: 9-13. |
0.01 |
|
2002 |
Elias DA, White LM, Fithian DC. Acute lateral patellar dislocation at MR imaging: injury patterns of medial patellar soft-tissue restraints and osteochondral injuries of the inferomedial patella. Radiology. 225: 736-43. PMID 12461254 DOI: 10.1148/radiol.2253011578 |
0.01 |
|
1987 |
Azar-Kia B, Naheedy MH, Elias DA, Mafee MF, Fine M. Optic nerve tumors: Role of magnetic resonance imaging and computed tomography Radiologic Clinics of North America. 25: 561-581. PMID 3575689 |
0.01 |
|
1987 |
Naheedy MH, Haag JR, Azar-Kia B, Mafee MF, Elias DA. MRI and CT of sellar and parasellar disorders. Radiologic Clinics of North America. 25: 819-47. PMID 3299478 |
0.01 |
|
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