Daiki Matsuda, Ph.D. - Publications

2004 Oregon State University, Corvallis, OR 
Molecular Biology, Plant Pathology Agriculture, Microbiology Biology

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Mauro VP, Matsuda D. Translation regulation by ribosomes: Increased complexity and expanded scope. Rna Biology. 0. PMID 26513496 DOI: 10.1080/15476286.2015.1107701  0.323
2014 Matsuda D, Mauro VP. Base pairing between hepatitis C virus RNA and 18S rRNA is required for IRES-dependent translation initiation in vivo. Proceedings of the National Academy of Sciences of the United States of America. 111: 15385-9. PMID 25313046 DOI: 10.1073/pnas.1413472111  0.428
2010 Matsuda D, Mauro VP. Determinants of initiation codon selection during translation in mammalian cells. Plos One. 5: e15057. PMID 21124832 DOI: 10.1371/journal.pone.0015057  0.357
2009 Tahiri-Alaoui A, Matsuda D, Xu H, Panagiotis P, Burman L, Lambeth LS, Petherbridge L, James W, Mauro V, Nair V. The 5' leader of the mRNA encoding the marek's disease virus serotype 1 pp14 protein contains an intronic internal ribosome entry site with allosteric properties. Journal of Virology. 83: 12769-78. PMID 19793814 DOI: 10.1128/Jvi.01010-09  0.343
2008 Matsuda D, Sato H, Maquat LE. Chapter 9 Studying Nonsense-Mediated mRNA Decay in Mammalian Cells Methods in Enzymology. 449: 177-201. PMID 19215759 DOI: 10.1016/S0076-6879(08)02409-9  0.305
2007 Matsuda D, Hosoda N, Kim YK, Maquat LE. Failsafe nonsense-mediated mRNA decay does not detectably target eIF4E-bound mRNA Nature Structural and Molecular Biology. 14: 974-979. PMID 17873884 DOI: 10.1038/Nsmb1297  0.368
2007 Matsuda D, Dreher TW. Cap- and initiator tRNA-dependent initiation of TYMV polyprotein synthesis by ribosomes: evaluation of the Trojan horse model for TYMV RNA translation. Rna (New York, N.Y.). 13: 129-37. PMID 17095542 DOI: 10.1261/Rna.244407  0.722
2006 Matsuda D, Dreher TW. Close spacing of AUG initiation codons confers dicistronic character on a eukaryotic mRNA. Rna (New York, N.Y.). 12: 1338-49. PMID 16682564 DOI: 10.1261/Rna.67906  0.715
2005 Matsuda D, Dreher TW. In vivo translation studies of plant viral RNAs using reporter genes. Current Protocols in Microbiology. Unit 16K.2. PMID 18770560 DOI: 10.1002/9780471729259.Mc16K02S00  0.724
2004 Matsuda D, Bauer L, Tinnesand K, Dreher TW. Expression of the two nested overlapping reading frames of turnip yellow mosaic virus RNA is enhanced by a 5' cap and by 5' and 3' viral sequences. Journal of Virology. 78: 9325-35. PMID 15308727 DOI: 10.1128/Jvi.78.17.9325-9335.2004  0.707
2004 Matsuda D, Yoshinari S, Dreher TW. eEF1A binding to aminoacylated viral RNA represses minus strand synthesis by TYMV RNA-dependent RNA polymerase. Virology. 321: 47-56. PMID 15033564 DOI: 10.1016/J.Virol.2003.10.028  0.737
2004 Matsuda D, Dreher TW. The tRNA-like structure of Turnip yellow mosaic virus RNA is a 3'-translational enhancer. Virology. 321: 36-46. PMID 15033563 DOI: 10.1016/J.Virol.2003.10.023  0.745
2000 Matsuda D, Dunoyer P, Hemmer O, Fritsch C, Dreher TW. The valine anticodon and valylatability of Peanut clump virus RNAs are not essential but provide a modest competitive advantage in plants. Journal of Virology. 74: 8720-5. PMID 10954573 DOI: 10.1128/Jvi.74.18.8720-8725.2000  0.737
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