| Year |
Citation |
Score |
| 2023 |
McGuire PM, Butkevich N, Saksena AV, Walter MT, Shapleigh JP, Reid MC. Oxic-anoxic cycling promotes coupling between complex carbon metabolism and denitrification in woodchip bioreactors. Environmental Microbiology. PMID 37105180 DOI: 10.1111/1462-2920.16387 |
0.31 |
|
| 2020 |
Zhuge YY, Shen XY, Liu YD, Shapleigh J, Li W. Application of acidic conditions and inert-gas sparging to achieve high-efficiency nitrous oxide recovery during nitrite denitrification. Water Research. 182: 116001. PMID 32544733 DOI: 10.1016/J.Watres.2020.116001 |
0.365 |
|
| 2019 |
Li W, Zhuang JL, Zhou YY, Meng FG, Kang D, Zheng P, Shapleigh JP, Liu YD. Metagenomics reveals microbial community differences lead to differential nitrate production in anammox reactors with differing nitrogen loading rates. Water Research. 169: 115279. PMID 31734392 DOI: 10.1016/J.Watres.2019.115279 |
0.362 |
|
| 2019 |
Shi LD, Wang M, Han YL, Lai CY, Shapleigh JP, Zhao HP. Multi-omics reveal various potential antimonate reductases from phylogenetically diverse microorganisms. Applied Microbiology and Biotechnology. PMID 31501939 DOI: 10.1007/S00253-019-10111-X |
0.374 |
|
| 2019 |
Nadeau SA, Roco CA, Debenport SJ, Anderson TR, Hofmeister KL, Walter MT, Shapleigh JP. Metagenomic analysis reveals distinct patterns of denitrification gene abundance across soil moisture, nitrate gradients. Environmental Microbiology. PMID 30851141 DOI: 10.1111/1462-2920.14587 |
0.338 |
|
| 2019 |
Roco CA, Dörsch P, Booth JG, Pepe-Ranney C, Groffman PM, Fahey TJ, Yavitt JB, Shapleigh JP. Using metagenomics to reveal landscape scale patterns of denitrifiers in a montane forest ecosystem Soil Biology and Biochemistry. 138: 107585. DOI: 10.1016/J.Soilbio.2019.107585 |
0.367 |
|
| 2018 |
Shi LD, Chen YS, Du JJ, Hu YQ, Shapleigh JP, Zhao HP. Metagenomic Evidence for a Species Capable of Bioremediation of Diverse Heavy Metals. Frontiers in Microbiology. 9: 3297. PMID 30687279 DOI: 10.3389/Fmicb.2018.03297 |
0.341 |
|
| 2018 |
Li W, Li H, Liu YD, Zheng P, Shapleigh JP. Salinity-aided selection of progressive onset denitrifiers as a means of providing nitrite for anammox. Environmental Science & Technology. PMID 30148965 DOI: 10.1021/Acs.Est.8B02314 |
0.381 |
|
| 2016 |
Roco CA, Bergaust LL, Bakken LR, Yavitt JB, Shapleigh JP. Modularity of nitrogen-oxide reducing soil bacteria: Linking phenotype to genotype. Environmental Microbiology. PMID 26914200 DOI: 10.1111/1462-2920.13250 |
0.426 |
|
| 2016 |
Roco CA, Bergaust LL, Shapleigh JP, Yavitt JB. Reduction of nitrate to nitrite by microbes under oxic conditions Soil Biology and Biochemistry. 100: 1-8. DOI: 10.1016/J.Soilbio.2016.05.008 |
0.352 |
|
| 2014 |
Bergaust LL, Hartsock A, Liu B, Bakken LR, Shapleigh JP. Role of norEF in denitrification, elucidated by physiological experiments with Rhodobacter sphaeroides. Journal of Bacteriology. 196: 2190-200. PMID 24706737 DOI: 10.1128/Jb.00003-14 |
0.802 |
|
| 2014 |
Hewson I, Eggleston EM, Doherty M, Lee DY, Owens M, Shapleigh JP, Cornwell JC, Crump BC. Metatranscriptomic analyses of plankton communities inhabiting surface and subpycnocline waters of the Chesapeake Bay during oxic-anoxic-oxic transitions. Applied and Environmental Microbiology. 80: 328-38. PMID 24162577 DOI: 10.1128/Aem.02680-13 |
0.304 |
|
| 2013 |
Stern AM, Liu B, Bakken LR, Shapleigh JP, Zhu J. A novel protein protects bacterial iron-dependent metabolism from nitric oxide. Journal of Bacteriology. 195: 4702-8. PMID 23935055 DOI: 10.1128/Jb.00836-13 |
0.38 |
|
| 2013 |
Shapleigh JP. Denitrifying prokaryotes The Prokaryotes: Prokaryotic Physiology and Biochemistry. 405-425. DOI: 10.1007/978-3-642-30141-4_71 |
0.405 |
|
| 2011 |
Hartsock A, Shapleigh JP. Physiological roles for two periplasmic nitrate reductases in Rhodobacter sphaeroides 2.4.3 (ATCC 17025). Journal of Bacteriology. 193: 6483-9. PMID 21949073 DOI: 10.1128/Jb.05324-11 |
0.789 |
|
| 2011 |
Shapleigh JP. Oxygen control of nitrogen oxide respiration, focusing on α-proteobacteria. Biochemical Society Transactions. 39: 179-83. PMID 21265769 DOI: 10.1042/Bst0390179 |
0.398 |
|
| 2010 |
Hartsock A, Shapleigh JP. Mechanisms of oxygen inhibition of nirK expression in Rhodobacter sphaeroides. Microbiology (Reading, England). 156: 3158-65. PMID 20595263 DOI: 10.1099/Mic.0.038703-0 |
0.779 |
|
| 2010 |
Hartsock A, Shapleigh JP. Identification, functional studies, and genomic comparisons of new members of the NnrR regulon in Rhodobacter sphaeroides. Journal of Bacteriology. 192: 903-11. PMID 19966004 DOI: 10.1128/Jb.01026-09 |
0.808 |
|
| 2009 |
Lee B, Usov OM, Grigoryants VM, Myers WK, Shapleigh JP, Scholes CP. The role of arginine-127 at the proximal NO-binding site in determining the electronic structure and function of 5-coordinate NO-heme in cytochrome c' of Rhodobacter sphaeroides. Biochemistry. 48: 8985-93. PMID 19685879 DOI: 10.1021/Bi900833F |
0.34 |
|
| 2008 |
Bergaust L, Shapleigh J, Frostegård A, Bakken L. Transcription and activities of NOx reductases in Agrobacterium tumefaciens: the influence of nitrate, nitrite and oxygen availability. Environmental Microbiology. 10: 3070-81. PMID 18312398 DOI: 10.1111/J.1462-2920.2007.01557.X |
0.389 |
|
| 2008 |
Baek SH, Hartsock A, Shapleigh JP. Agrobacterium tumefaciens C58 uses ActR and FnrN to control nirK and nor expression. Journal of Bacteriology. 190: 78-86. PMID 17981975 DOI: 10.1128/Jb.00792-07 |
0.778 |
|
| 2007 |
Basaglia M, Toffanin A, Baldan E, Bottegal M, Shapleigh JP, Casella S. Selenite-reducing capacity of the copper-containing nitrite reductase of Rhizobium sullae. Fems Microbiology Letters. 269: 124-30. PMID 17227457 DOI: 10.1111/J.1574-6968.2006.00617.X |
0.487 |
|
| 2006 |
Laratta WP, Nanaszko MJ, Shapleigh JP. Electron transfer to nitrite reductase of Rhodobacter sphaeroides 2.4.3: examination of cytochromes c2 and cY. Microbiology (Reading, England). 152: 1479-88. PMID 16622064 DOI: 10.1099/Mic.0.28524-0 |
0.779 |
|
| 2006 |
Usov OM, Choi PS, Shapleigh JP, Scholes CP. ENDOR of NO-ligated cytochrome c'. Journal of the American Chemical Society. 128: 5021-32. PMID 16608336 DOI: 10.1021/Ja055323F |
0.562 |
|
| 2006 |
Choi PS, Naal Z, Moore C, Casado-Rivera E, Abruña HD, Helmann JD, Shapleigh JP. Assessing the impact of denitrifier-produced nitric oxide on other bacteria. Applied and Environmental Microbiology. 72: 2200-5. PMID 16517672 DOI: 10.1128/Aem.72.3.2200-2205.2006 |
0.646 |
|
| 2006 |
Casella S, Shapleigh JP, Toffanin A, Basaglia M. Investigation into the role of the truncated denitrification chain in Rhizobium sullae strain HCNT1 Biochemical Society Transactions. 34: 130-132. PMID 16417501 DOI: 10.1042/Bst0340130 |
0.471 |
|
| 2005 |
Baek SH, Shapleigh JP. Expression of nitrite and nitric oxide reductases in free-living and plant-associated Agrobacterium tumefaciens C58 cells. Applied and Environmental Microbiology. 71: 4427-36. PMID 16085833 DOI: 10.1128/Aem.71.8.4427-4436.2005 |
0.475 |
|
| 2005 |
Usov OM, Choi PS, Shapleigh JP, Scholes CP. ENDOR investigation of the liganding environment of mixed-spin ferric cytochrome c'. Journal of the American Chemical Society. 127: 9485-94. PMID 15984875 DOI: 10.1021/Ja043994S |
0.554 |
|
| 2005 |
Choi PS, Grigoryants VM, Abruña HD, Scholes CP, Shapleigh JP. Regulation and function of cytochrome c' in Rhodobacter sphaeroides 2.4.3. Journal of Bacteriology. 187: 4077-85. PMID 15937170 DOI: 10.1128/Jb.187.12.4077-4085.2005 |
0.636 |
|
| 2004 |
Baek SH, Rajashekara G, Splitter GA, Shapleigh JP. Denitrification genes regulate Brucella virulence in mice. Journal of Bacteriology. 186: 6025-31. PMID 15342571 DOI: 10.1128/Jb.186.18.6025-6031.2004 |
0.307 |
|
| 2003 |
Laratta WP, Shapleigh JP. Site-directed mutagenesis of NnrR: a transcriptional regulator of nitrite and nitric oxide reductase in Rhodobacter sphaeroides. Fems Microbiology Letters. 229: 173-8. PMID 14680695 DOI: 10.1016/S0378-1097(03)00821-8 |
0.797 |
|
| 2003 |
Basumallick L, Szilagyi RK, Zhao Y, Shapleigh JP, Scholes CP, Solomon EI. Spectroscopic studies of the Met182Thr mutant of nitrite reductase: role of the axial ligand in the geometric and electronic structure of blue and green copper sites. Journal of the American Chemical Society. 125: 14784-92. PMID 14640653 DOI: 10.1021/Ja037232T |
0.306 |
|
| 2003 |
Yin S, Fuangthong M, Laratta WP, Shapleigh JP. Use of a green fluorescent protein-based reporter fusion for detection of nitric oxide produced by denitrifiers. Applied and Environmental Microbiology. 69: 3938-44. PMID 12839764 DOI: 10.1128/Aem.69.7.3938-3944.2003 |
0.778 |
|
| 2002 |
Laratta WP, Choi PS, Tosques IE, Shapleigh JP. Involvement of the PrrB/PrrA two-component system in nitrite respiration in Rhodobacter sphaeroides 2.4.3: evidence for transcriptional regulation. Journal of Bacteriology. 184: 3521-9. PMID 12057946 DOI: 10.1128/Jb.184.13.3521-3529.2002 |
0.777 |
|
| 2002 |
Zhao Y, Lukoyanov DA, Toropov YV, Wu K, Shapleigh JP, Scholes CP. Catalytic function and local proton structure at the type 2 copper of nitrite reductase: the correlation of enzymatic pH dependence, conserved residues, and proton hyperfine structure. Biochemistry. 41: 7464-74. PMID 12044180 DOI: 10.1021/Bi0256274 |
0.332 |
|
| 2002 |
Lee DY, Ramos A, Macomber L, Shapleigh JP. Taxis response of various denitrifying bacteria to nitrate and nitrite. Applied and Environmental Microbiology. 68: 2140-7. PMID 11976082 DOI: 10.1128/Aem.68.5.2140-2147.2002 |
0.438 |
|
| 2002 |
Bartnikas TB, Wang Y, Bobo T, Veselov A, Scholes CP, Shapleigh JP. Characterization of a member of the NnrR regulon in Rhodobacter sphaeroides 2.4.3 encoding a haem-copper protein. Microbiology (Reading, England). 148: 825-33. PMID 11882718 DOI: 10.1099/00221287-148-3-825 |
0.544 |
|
| 2001 |
Jain R, Shapleigh JP. Characterization of nirV and a gene encoding a novel pseudoazurin in Rhodobacter sphaeroides 2.4.3 Microbiology. 147: 2505-2515. PMID 11535790 DOI: 10.1099/00221287-147-9-2505 |
0.535 |
|
| 1998 |
Mitchell DM, Wang Y, Alben JO, Shapleigh JP. FT-IR analysis of membranes of Rhodobacter sphaeroides 2.4.3 grown under microaerobic and denitrifying conditions Biochimica Et Biophysica Acta - Bioenergetics. 1409: 99-105. PMID 9838065 DOI: 10.1016/S0005-2728(98)00154-6 |
0.394 |
|
| 1998 |
Olesen K, Veselov A, Zhao Y, Wang Y, Danner B, Scholes CP, Shapleigh JP. Spectroscopic, kinetic, and electrochemical characterization of heterologously expressed wild-type and mutant forms of copper-containing nitrite reductase from Rhodobacter sphaeroides 2.4.3. Biochemistry. 37: 6086-94. PMID 9558347 DOI: 10.1021/Bi971603Z |
0.331 |
|
| 1997 |
Kwiatkowski AV, Laratta WP, Toffanin A, Shapleigh JP. Analysis of the role of the nnrR gene product in the response of Rhodobacter sphaeroides 2.4.1 to exogenous nitric oxide. Journal of Bacteriology. 179: 5618-20. PMID 9287025 DOI: 10.1128/Jb.179.17.5618-5620.1997 |
0.792 |
|
| 1997 |
Bartnikas TB, Tosques IE, Laratta WP, Shi J, Shapleigh JP. Characterization of the nitric oxide reductase-encoding region in Rhodobacter sphaeroides 2.4.3. Journal of Bacteriology. 179: 3534-40. PMID 9171397 DOI: 10.1128/Jb.179.11.3534-3540.1997 |
0.789 |
|
| 1997 |
Tosques IE, Kwiatkowski AV, Shi J, Shapleigh JP. Characterization and regulation of the gene encoding nitrite reductase in Rhodobacter sphaeroides 2.4.3 Journal of Bacteriology. 179: 1090-1095. PMID 9023188 DOI: 10.1128/Jb.179.4.1090-1095.1997 |
0.568 |
|
| 1996 |
Toffanin A, Wu Q, Maskus M, Caselia S, Abruña HD, Shapleigh JP. Characterization of the gene encoding nitrite reductase and the physiological consequences of its expression in the nondenitrifying Rhizobium "hedysari" strain HCNT1. Applied and Environmental Microbiology. 62: 4019-25. PMID 8899992 DOI: 10.1128/Aem.62.11.4019-4025.1996 |
0.519 |
|
| 1996 |
Kwiatkowski AV, Shapleigh JP. Requirement of nitric oxide for induction of genes whose products are involved in nitric oxide metabolism in Rhodobacter sphaeroides 2.4.3 Journal of Biological Chemistry. 271: 24382-24388. PMID 8798693 DOI: 10.1074/Jbc.271.40.24382 |
0.577 |
|
| 1996 |
Tosques IE, Shi J, Shapleigh JP. Cloning and characterization of nnrR, whose product is required for the expression of proteins involved in nitric oxide metabolism in Rhodobacter sphaeroides 2.4.3 Journal of Bacteriology. 178: 4958-4964. PMID 8759861 DOI: 10.1128/Jb.178.16.4958-4964.1996 |
0.535 |
|
| 1996 |
Hosler JP, Shapleigh JP, Mitchell DM, Kim Y, Pressler MA, Georgiou C, Babcock GT, Alben JO, Ferguson-Miller S, Gennis RB. Polar residues in helix VIII of subunit I of cytochrome c oxidase influence the activity and the structure of the active site. Biochemistry. 35: 10776-83. PMID 8718868 DOI: 10.1021/Bi9606511 |
0.305 |
|
| 1995 |
Fetter JR, Qian J, Shapleigh J, Thomas JW, García-Horsman A, Schmidt E, Hosler J, Babcock GT, Gennis RB, Ferguson-Miller S. Possible proton relay pathways in cytochrome c oxidase. Proceedings of the National Academy of Sciences of the United States of America. 92: 1604-8. PMID 7878026 DOI: 10.1073/Pnas.92.5.1604 |
0.356 |
|
| 1994 |
Yun C, Barquera B, Iba K, Takamiya K, Shapleigh J, Crofts AR, Gennis RB. Deletion of the gene encoding cytochromeb562fromRhodobacter sphaeroides Fems Microbiology Letters. 120: 105-110. DOI: 10.1111/J.1574-6968.1994.Tb07015.X |
0.376 |
|
| 1993 |
Calhoun MW, Thomas JW, Hill JJ, Hosler JP, Shapleigh JP, Tecklenburg MM, Ferguson-Miller S, Babcock GT, Alben JO, Gennis RB. Identity of the axial ligand of the high-spin heme in cytochrome oxidase: spectroscopic characterization of mutants in the bo-type oxidase of Escherichia coli and the aa3-type oxidase of Rhodobacter sphaeroides. Biochemistry. 32: 10905-11. PMID 8399240 DOI: 10.1021/Bi00091A046 |
0.366 |
|
| 1993 |
Hosler JP, Ferguson-Miller S, Calhoun MW, Thomas JW, Hill J, Lemieux L, Ma J, Georgiou C, Fetter J, Shapleigh J, Tecklenburg MMJ, Babcock GT, Gennis RB. Insight into the active-site structure and function of cytochrome oxidase by analysis of site-directed mutants of bacterial cytochrome aa3 and cytochrome bo Journal of Bioenergetics and Biomembranes. 25: 121-136. PMID 8389745 DOI: 10.1007/Bf00762854 |
0.345 |
|
| 1992 |
Shapleigh JP, Hosler JP, Tecklenburg MM, Kim Y, Babcock GT, Gennis RB, Ferguson-Miller S. Definition of the catalytic site of cytochrome c oxidase: specific ligands of heme a and the heme a3-CuB center. Proceedings of the National Academy of Sciences of the United States of America. 89: 4786-90. PMID 1317571 DOI: 10.1073/Pnas.89.11.4786 |
0.323 |
|
| 1992 |
Shapleigh JP, Gennis RB. Cloning, sequencing and deletion from the chromosome of the gene encoding subunit I of the aa3-type cytochrome c oxidase of Rhodobacter sphaeroides Molecular Microbiology. 6: 635-642. PMID 1313140 DOI: 10.1111/J.1365-2958.1992.Tb01511.X |
0.451 |
|
| 1992 |
Shapleigh JP, Hill JJ, Alben JO, Gennis RB. Spectroscopic and genetic evidence for two heme-Cu-containing oxidases in Rhodobacter sphaeroides Journal of Bacteriology. 174: 2338-2343. PMID 1313003 DOI: 10.1128/Jb.174.7.2338-2343.1992 |
0.409 |
|
| 1987 |
Shapleigh JP, Davies KJP, Payne WJ. Detergent inhibition of nitric-oxide reductase activity Biochimica Et Biophysica Acta (Bba)/Protein Structure and Molecular. 911: 334-340. PMID 3028488 DOI: 10.1016/0167-4838(87)90074-4 |
0.321 |
|
| 1987 |
White GF, Dodgson KS, Davies I, Matts PJ, Shapleigh JP, Payne WJ. Bacterial utilisation of short-chain primary alkyl sulphate esters Fems Microbiology Letters. 40: 173-177. DOI: 10.1111/J.1574-6968.1987.Tb02020.X |
0.362 |
|
| 1986 |
Shapleigh JP, Payne WJ. Respiration-linked proton flux in Wolinella succinogenes during reduction of N-oxides Archives of Biochemistry and Biophysics. 244: 713-718. PMID 3004349 DOI: 10.1016/0003-9861(86)90640-5 |
0.385 |
|
| 1986 |
Casella S, Shapleigh JP, Payne WJ. Nitrite reduction in Rhizobium "hedysari" strain HCNT 1 Archives of Microbiology. 146: 233-238. DOI: 10.1007/Bf00403222 |
0.403 |
|
| 1985 |
Shapleigh JP, Payne WJ. Nitric oxide-dependent proton translocation in various denitrifiers Journal of Bacteriology. 163: 837-840. PMID 3928599 DOI: 10.1128/Jb.163.3.837-840.1985 |
0.366 |
|
| 1985 |
Shapleigh JP, Payne WJ. Differentiation of c,d1 cytochrome and copper nitrite reductase production in denitrifiers Fems Microbiology Letters. 26: 275-279. DOI: 10.1111/J.1574-6968.1985.Tb01610.X |
0.412 |
|
| 1984 |
Dodgson K, White G, Massey J, Shapleigh J, Payne W. Utilization of sodium dodecyl sulphate by denitrifying bacteria under anaerobic conditions Fems Microbiology Letters. 24: 53-56. DOI: 10.1111/J.1574-6968.1984.Tb01243.X |
0.32 |
|
| Show low-probability matches. |