Raphael H. Valdivia - Related publications

Genetics and Genomics Duke University, Durham, NC 
Microbiology Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Sanchez SE, Goodman AG, Omsland A. Metabolic Plasticity Aids Amphotropism of . Infection and Immunity. IAI0013521. PMID 34491791 DOI: 10.1128/IAI.00135-21   
2021 Mao F, Liu K, Wong NK, Zhang X, Yi W, Xiang Z, Xiao S, Yu Z, Zhang Y. Virulence of Accentuates Apoptosis and Immune Rigor in the Oyster . Frontiers in Immunology. 12: 746017. PMID 34621277 DOI: 10.3389/fimmu.2021.746017   
2021 Fitzsimmons L, Clark T, Hackstadt T. Nitric Oxide Inhibition of . Infection and Immunity. IAI0037121. PMID 34491789 DOI: 10.1128/IAI.00371-21   
2021 Liu X, Zhu K, Duan X, Wang P, Han Y, Peng W, Huang J. Extracellular matrix stiffness modulates host-bacteria interactions and antibiotic therapy of bacterial internalization. Biomaterials. 277: 121098. PMID 34478931 DOI: 10.1016/j.biomaterials.2021.121098   
2021 Zhang Y, Song L, Hou L, Cao Z, Vongsangnak W, Zhu G, Xu Q, Chen G. Dual Transcriptomic Analyses Unveil Host-Pathogen Interactions Between Serovar Enteritidis and Laying Ducks (). Frontiers in Microbiology. 12: 705712. PMID 34421865 DOI: 10.3389/fmicb.2021.705712   
2021 Wang X, Lin X, Wan Z, Zuo J, Wang Z, Xu Y, Phouthapane V, Han X, Zhang J, Miao J. Regulation of ydiV-induced biological characteristics permits Escherichia coli evasion of the host STING inflammatory response. Veterinary Microbiology. 261: 109207. PMID 34419774 DOI: 10.1016/j.vetmic.2021.109207   
2021 Waturuocha UW, Krishna MS, Malhotra V, Dixit NM, Saini DK. A Low-Prevalence Single-Nucleotide Polymorphism in the Sensor Kinase PhoR in Suppresses Its Autophosphatase Activity and Reduces Pathogenic Fitness: Implications in Evolutionary Selection. Frontiers in Microbiology. 12: 724482. PMID 34512602 DOI: 10.3389/fmicb.2021.724482   
2021 Lu W, Tan J, Lu H, Wang G, Dong W, Wang C, Li X, Tan C. Function of Rhs proteins in porcine extraintestinal pathogenic Escherichia coli PCN033. Journal of Microbiology (Seoul, Korea). PMID 34382147 DOI: 10.1007/s12275-021-1189-2   
2021 Pu W, Zhao C, Wazir J, Su Z, Niu M, Song S, Wei L, Li L, Zhang X, Shi X, Wang H. Comparative transcriptomic analysis of THP-1-derived macrophages infected with Mycobacterium tuberculosis H37Rv, H37Ra and BCG. Journal of Cellular and Molecular Medicine. PMID 34632719 DOI: 10.1111/jcmm.16980   
2021 Mayer K, Kucklick M, Marbach H, Ehling-Schulz M, Engelmann S, Grunert T. Within-Host Adaptation of in a Bovine Mastitis Infection Is Associated with Increased Cytotoxicity. International Journal of Molecular Sciences. 22. PMID 34445550 DOI: 10.3390/ijms22168840   
2021 Chen D, Burford WB, Pham G, Zhang L, Alto LT, Ertelt JM, Winter MG, Winter SE, Way SS, Alto NM. Systematic reconstruction of an effector-gene network reveals determinants of Salmonella cellular and tissue tropism. Cell Host & Microbe. PMID 34536347 DOI: 10.1016/j.chom.2021.08.012   
2021 Stranahan LW, Arenas-Gamboa AM. When the Going Gets Rough: The Significance of Lipopolysaccharide Phenotype in Host-Pathogen Interactions. Frontiers in Microbiology. 12: 713157. PMID 34335551 DOI: 10.3389/fmicb.2021.713157   
2021 Liu X, Cai J, Li X, Yu F, Wu D. Can bacterial type III effectors mediate pathogen-plant-microbiota ternary interactions? Plant, Cell & Environment. PMID 34533222 DOI: 10.1111/pce.14185   
2021 Sanchez-Garrido J, Alberdi L, Chatterjee S, Frankel G, Mullineaux-Sanders C. Type III secretion system effector subnetworks elicit distinct host immune responses to infection. Current Opinion in Microbiology. 64: 19-26. PMID 34537517 DOI: 10.1016/j.mib.2021.08.008   
2021 Yin L, Li Q, Wang Z, Tu J, Shao Y, Song X, Pan X, Qi K. The role of Escherichia coli type III secretion system 2 chaperone protein ygeG in pathogenesis of avian pathogenic Escherichia coli. Research in Veterinary Science. 140: 203-211. PMID 34534901 DOI: 10.1016/j.rvsc.2021.09.011   
2021 Hu L, Zhao L, Zhuang Z, Wang X, Fu Q, Huang H, Lin L, Huang L, Qin Y, Zhang J, Yan Q. The Effect of Gene on the Virulence of and the Immune Response of . Frontiers in Microbiology. 12: 720967. PMID 34484162 DOI: 10.3389/fmicb.2021.720967   
2021 Bhardwaj S, Bhatia S, Singh S, Franco F. Growing emergence of drug-resistant and attenuation of its virulence using quorum sensing inhibitors: A critical review. Iranian Journal of Basic Medical Sciences. 24: 699-719. PMID 34630947 DOI: 10.22038/IJBMS.2021.49151.11254   
2021 Rollenhagen C, Agyeman H, Eszterhas S, Lee SA. Candida albicans Contributes to Efficient Endocytosis, Cell Wall Integrity, Filamentation, and Virulence. Msphere. e0070721. PMID 34585966 DOI: 10.1128/mSphere.00707-21   
2021 Kundra S, Lam LN, Kajfasz JK, Casella LG, Andersen MJ, Abranches J, Flores-Mireles AL, Lemos JA. c-di-AMP is essential for the virulence of . Infection and Immunity. IAI0036521. PMID 34424750 DOI: 10.1128/IAI.00365-21   
2021 Schwarz C, Töre Y, Hoesker V, Ameling S, Grün K, Völker U, Schulze PC, Franz M, Faber C, Schaumburg F, Niemann S, Hoerr V. Host-pathogen interactions of clinical isolates to induce infective endocarditis. Virulence. 12: 2073-2087. PMID 34490828 DOI: 10.1080/21505594.2021.1960107   
2021 Ojha R, Dittmar AA, Severin GB, Koestler BJ. Diguanylate Cyclases Regulate Virulence. Journal of Bacteriology. JB0024221. PMID 34543105 DOI: 10.1128/JB.00242-21   
2021 Subramaniam S, Joyce P, Thomas N, Prestidge CA. Bioinspired drug delivery strategies for repurposing conventional antibiotics against intracellular infections. Advanced Drug Delivery Reviews. 113948. PMID 34464665 DOI: 10.1016/j.addr.2021.113948   
2021 Zhong R, Li H, Li H, Fang S, Liu J, Chen Y, Liu S, Lin S. Development of Amphiphilic Coumarin Derivatives as Membrane-Active Antimicrobial Agents with Potent Efficacy against Gram-Positive Pathogenic Bacteria. Acs Infectious Diseases. PMID 34505771 DOI: 10.1021/acsinfecdis.1c00246   
2021 Luchetti G, Roncaioli JL, Chavez RA, Schubert AF, Kofoed EM, Reja R, Cheung TK, Liang Y, Webster JD, Lehoux I, Skippington E, Reeder J, Haley B, Tan MW, Rose CM, et al. Shigella ubiquitin ligase IpaH7.8 targets gasdermin D for degradation to prevent pyroptosis and enable infection. Cell Host & Microbe. PMID 34492225 DOI: 10.1016/j.chom.2021.08.010   
2021 Lee HJ, Lee SH, Jeon JH, Kim HJ, Jeong EK, Kim MJ, Jung YM, Jung YJ. Stimulation of Toll-Like Receptor 3 Diminishes Intracellular Growth of Typhimurium by Enhancing Autophagy in Murine Macrophages. Metabolites. 11. PMID 34564417 DOI: 10.3390/metabo11090602   
2021 Douglas EJA, Duggan S, Brignoli T, Massey RC. The MpsB protein contributes to both the toxicity and immune evasion capacity of . Microbiology (Reading, England). 167. PMID 34618666 DOI: 10.1099/mic.0.001096   
2021 Gutiérrez S, Fischer J, Ganesan R, Hos NJ, Cildir G, Wolke M, Pessia A, Frommolt P, Desiderio V, Velagapudi V, Robinson N. Salmonella Typhimurium impairs glycolysis-mediated acidification of phagosomes to evade macrophage defense. Plos Pathogens. 17: e1009943. PMID 34555129 DOI: 10.1371/journal.ppat.1009943   
2021 Liu Y, Fu K, Wier EM, Lei Y, Hodgson A, Xu D, Xia X, Zheng D, Ding H, Sears CL, Yang J, Wan F. Bacterial genotoxin accelerates transient infection-driven murine colon tumorigenesis. Cancer Discovery. PMID 34479870 DOI: 10.1158/2159-8290.CD-21-0912   
2021 Hansen JD, Ray K, Chen PJ, Yun S, Elliott DG, Conway CM, Calcutt M, Purcell MK, Welch TJ, Bellah JP, Davis EM, Greer JB, Soto E. Disruption of the gene results in virulence attenuation and protection in zebrafish. Infection and Immunity. IAI0022021. PMID 34424748 DOI: 10.1128/IAI.00220-21   
2021 Chi D, Lin X, Meng Q, Tan J, Gong Q, Tong Z. Real-Time Induction of Macrophage Apoptosis, Pyroptosis, and Necroptosis by OG1RF and Two Root Canal Isolated Strains. Frontiers in Cellular and Infection Microbiology. 11: 720147. PMID 34513732 DOI: 10.3389/fcimb.2021.720147   
2021 Yu M, Yu J, Cao H, Song T, Pan X, Qi Z, Du Y, Zhang R, Huang S, Liu W, Liu Y. SUN-Family Protein Regulates the Development and Virulence of . Frontiers in Microbiology. 12: 739453. PMID 34589077 DOI: 10.3389/fmicb.2021.739453   
2021 Lazar V, Holban AM, Curutiu C, Chifiriuc MC. Modulation of Quorum Sensing and Biofilms in Less Investigated Gram-Negative ESKAPE Pathogens. Frontiers in Microbiology. 12: 676510. PMID 34394026 DOI: 10.3389/fmicb.2021.676510   
2021 Hao G, Shu R, Ding L, Chen X, Miao Y, Wu J, Zhou H, Wang H. Bacteriophage SRD2021 Recognizing Capsular Polysaccharide Shows Therapeutic Potential in Serotype K47 Infections. Antibiotics (Basel, Switzerland). 10. PMID 34438943 DOI: 10.3390/antibiotics10080894   
2021 Cao Q, Wei W, Wang H, Wang Z, Lv Y, Dai M, Tan C, Chen H, Wang X. Cleavage of E-cadherin by porcine respiratory bacterial pathogens facilitates airway epithelial barrier disruption and bacterial paracellular transmigration. Virulence. 12: 2296-2313. PMID 34482810 DOI: 10.1080/21505594.2021.1966996   
2021 Matsumoto Y, Nagamachi T, Yoshikawa A, Yamazaki H, Yamasaki Y, Yamada T, Sugita T. Development of an efficient gene-targeting system for elucidating infection mechanisms of the fungal pathogen Trichosporon asahii. Scientific Reports. 11: 18270. PMID 34521867 DOI: 10.1038/s41598-021-97287-3   
2021 Fernández L, Cima-Cabal MD, Duarte AC, Rodríguez A, García-Suárez MDM, García P. Gram-Positive Pneumonia: Possibilities Offered by Phage Therapy. Antibiotics (Basel, Switzerland). 10. PMID 34439050 DOI: 10.3390/antibiotics10081000   
2021 Diebold PJ, New FN, Hovan M, Satlin MJ, Brito IL. Linking plasmid-based beta-lactamases to their bacterial hosts using single-cell fusion PCR. Elife. 10. PMID 34282723 DOI: 10.7554/eLife.66834   
2021 Sacristán S, Goss EM, Eves-van den Akker S. How Do Pathogens Evolve Novel Virulence Activities? Molecular Plant-Microbe Interactions : Mpmi. MPMI09200258IA. PMID 33522842 DOI: 10.1094/MPMI-09-20-0258-IA   
2021 Man L, Klare WP, Dale AL, Cain JA, Cordwell SJ. Integrated mass spectrometry-based multi-omics for elucidating mechanisms of bacterial virulence. Biochemical Society Transactions. PMID 34374408 DOI: 10.1042/BST20191088   
2021 Choi H, Hwang M, Chatterjee P, Jinadatha C, Navarathna DH. Rare Lelliottia nimipressuralis from a wound infection case report using whole genome sequencing-based bacterial identification. Diagnostic Microbiology and Infectious Disease. 101: 115538. PMID 34619568 DOI: 10.1016/j.diagmicrobio.2021.115538   
2021 Keffeler EC, Iyer VS, Henderson AJ, Huck IL, Schwarting N, Cortez A, Hancock LE. Activity of CcpA-regulated GH18 family glycosyl hydrolases that contribute to nutrient acquisition and fitness in . Infection and Immunity. IAI0034321. PMID 34424752 DOI: 10.1128/IAI.00343-21   
2021 Gao Q, Lu S, Wang M, Jia R, Chen S, Zhu D, Liu M, Zhao X, Yang Q, Wu Y, Zhang S, Huang J, Mao S, Ou X, Sun D, et al. Putative Outer Membrane Protein H Affects Virulence. Frontiers in Microbiology. 12: 708225. PMID 34616377 DOI: 10.3389/fmicb.2021.708225   
2021 Zhang Y, Xiao X, Hu Y, Liao Z, Zhu W, Jiang R, Yang C, Zhang Y, Su J. CXCL20a, a Teleost-Specific Chemokine That Orchestrates Direct Bactericidal, Chemotactic, and Phagocytosis-Killing-Promoting Functions, Contributes to Clearance of Bacterial Infections. Journal of Immunology (Baltimore, Md. : 1950). PMID 34462313 DOI: 10.4049/jimmunol.2100300   
2021 Stefanowicz K, Szymanska-Chargot M, Truman W, Walerowski P, Olszak M, Augustyniak A, Kosmala A, Zdunek A, Malinowski R. -Triggered Cell Enlargement and Loss of Cellular Integrity in Root Systems Are Mediated by Pectin Demethylation. Frontiers in Plant Science. 12: 711838. PMID 34394168 DOI: 10.3389/fpls.2021.711838   
2021 Flores-Valdez M, Ares MA, Rosales-Reyes R, Torres J, Girón JA, Weimer BC, Mendez-Tenorio A, De la Cruz MA. Whole Genome Sequencing of Pediatric Strains Reveals Important Insights Into Their Virulence-Associated Traits. Frontiers in Microbiology. 12: 711577. PMID 34489901 DOI: 10.3389/fmicb.2021.711577   
2021 Nakamura M, Kondo M, Suzuki A, Hirai H, Che FS. Novel Effector RHIFs Identified From Strains N1141 and K1 Play Different Roles in Host and Non-host Plants. Frontiers in Plant Science. 12: 716738. PMID 34421970 DOI: 10.3389/fpls.2021.716738   
2021 Pang Z, Zhu Q. Traditional Chinese Medicine is an Alternative Therapeutic Option for Treatment of Infections. Frontiers in Pharmacology. 12: 737252. PMID 34512364 DOI: 10.3389/fphar.2021.737252   
2021 Zhi F, Zhou D, Chen J, Fang J, Zheng W, Li J, Hao M, Shi Y, Jin Y, Wang A. An ArsR Transcriptional Regulator Facilitates sp. Survival via Regulating Self and Outer Membrane Protein. International Journal of Molecular Sciences. 22. PMID 34639201 DOI: 10.3390/ijms221910860   
2021 Nabeta HW, Kouokam JC, Lasnik AB, Fuqua JL, Palmer KE. Novel Antifungal Activity of Q-Griffithsin, a Broad-Spectrum Antiviral Lectin. Microbiology Spectrum. e0095721. PMID 34494857 DOI: 10.1128/Spectrum.00957-21   
2021 Rafiei Hashtchin A, Fehlhaber B, Hetzel M, Manstein F, Stalp JL, Glage S, Abeln M, Zweigerdt R, Munder A, Viemann D, Ackermann M, Lachmann N. Human iPSC-derived macrophages for efficient Staphylococcus aureus clearance in a murine pulmonary infection model. Blood Advances. PMID 34649271 DOI: 10.1182/bloodadvances.2021004853