Lisa Y. Stein - Publications

University of California, Riverside, Riverside, CA, United States 
Microbiology Biology

82 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Sugden S, Lazic M, Sauvageau D, Stein LY. Transcriptomic and metabolomic responses to carbon and nitrogen sources in . Applied and Environmental Microbiology. PMID 33893121 DOI: 10.1128/AEM.00385-21  0.01
2020 Lazic M, Sugden S, Sauvageau D, Stein LY. Metabolome profiles of the alphaproteobacterial methanotroph Methylocystis sp. Rockwell in response to carbon and nitrogen source. Fems Microbiology Letters. PMID 33378457 DOI: 10.1093/femsle/fnaa219  0.01
2020 Sugden S, Sanderson D, Ford K, Stein LY, St Clair CC. An altered microbiome in urban coyotes mediates relationships between anthropogenic diet and poor health. Scientific Reports. 10: 22207. PMID 33335116 DOI: 10.1038/s41598-020-78891-1  0.01
2020 Stein LY, Klotz MG, Lancaster KM, Nicol GW, Qin W, Schleper C, Stahl D, Ward BB, Yoon S. Comment on"A Critical Review on Nitrous Oxide Production by Ammonia-Oxidizing Archaea" by Lan Wu, Xueming Chen, Wei Wei, Yiwen Liu, Dongbo Wang, and Bing-Jie Ni. Environmental Science & Technology. PMID 33325687 DOI: 10.1021/acs.est.0c06792  1
2020 Sugden S, St Clair CC, Stein LY. Individual and Site-Specific Variation in a Biogeographical Profile of the Coyote Gastrointestinal Microbiota. Microbial Ecology. PMID 32594248 DOI: 10.1007/S00248-020-01547-0  0.01
2020 McGenity TJ, Gessesse A, Hallsworth JE, Garcia Cela E, Verheecke-Vaessen C, Wang F, Chavarría M, Haggblom MM, Molin S, Danchin A, Smid EJ, Lood C, Cockell CS, Whitby C, Liu SJ, ... ... Stein LY, et al. Visualizing the invisible: class excursions to ignite children's enthusiasm for microbes. Microbial Biotechnology. PMID 32406115 DOI: 10.1111/1751-7915.13576  0.01
2020 Stein LY. The Long-Term Relationship between Microbial Metabolism and Greenhouse Gases. Trends in Microbiology. 28: 500-511. PMID 32396828 DOI: 10.1016/J.Tim.2020.01.006  0.01
2019 Cavicchioli R, Ripple WJ, Timmis KN, Azam F, Bakken LR, Baylis M, Behrenfeld MJ, Boetius A, Boyd PW, Classen AT, Crowther TW, Danovaro R, Foreman CM, Huisman J, Hutchins DA, ... ... Stein LY, et al. Scientists' warning to humanity: microorganisms and climate change. Nature Reviews. Microbiology. PMID 31213707 DOI: 10.1038/S41579-019-0222-5  0.01
2019 Kits KD, Jung MY, Vierheilig J, Pjevac P, Sedlacek CJ, Liu S, Herbold C, Stein LY, Richter A, Wissel H, Brüggemann N, Wagner M, Daims H. Low yield and abiotic origin of NO formed by the complete nitrifier Nitrospira inopinata. Nature Communications. 10: 1836. PMID 31015413 DOI: 10.1038/S41467-019-09790-X  1
2019 Sedlacek CJ, McGowan B, Suwa Y, Sayavedra-Soto L, Laanbroek HJ, Stein LY, Norton JM, Klotz MG, Bollmann A. A Physiological and Genomic Comparison of Nitrosomonas Cluster 6a and 7 Ammonia-Oxidizing Bacteria. Microbial Ecology. PMID 30976841 DOI: 10.1007/S00248-019-01378-8  1
2019 Timmis K, Cavicchioli R, Garcia JL, Nogales B, Chavarría M, Stein L, McGenity TJ, Webster N, Singh B, Handelsman J, de Lorenzo V, Pruzzo C, Timmis J, Martín JLR, Verstraete W, et al. The urgent need for microbiology literacy in society. Environmental Microbiology. PMID 30912268 DOI: 10.1111/1462-2920.14611  0.01
2018 Orata FD, Meier-Kolthoff JP, Sauvageau D, Stein LY. Phylogenomic Analysis of the Gammaproteobacterial Methanotrophs (Order ) Calls for the Reclassification of Members at the Genus and Species Levels. Frontiers in Microbiology. 9: 3162. PMID 30631317 DOI: 10.3389/Fmicb.2018.03162  0.01
2018 Tays C, Guarnieri MT, Sauvageau D, Stein LY. Combined Effects of Carbon and Nitrogen Source to Optimize Growth of Proteobacterial Methanotrophs. Frontiers in Microbiology. 9: 2239. PMID 30319568 DOI: 10.3389/Fmicb.2018.02239  0.01
2018 Stein LY. Insights into the physiology of ammonia-oxidizing microorganisms. Current Opinion in Chemical Biology. 49: 9-15. PMID 30236860 DOI: 10.1016/J.Cbpa.2018.09.003  0.01
2018 Stein LY. Eukaryotic Evolution: An Ancient Breath of Nitrate. Current Biology : Cb. 28: R875-R877. PMID 30130507 DOI: 10.1016/J.Cub.2018.06.029  0.01
2018 Zaldívar Carrillo JA, Stein LY, Sauvageau D. Defining Nutrient Combinations for Optimal Growth and Polyhydroxybutyrate Production by OB3b Using Response Surface Methodology. Frontiers in Microbiology. 9: 1513. PMID 30072960 DOI: 10.3389/Fmicb.2018.01513  0.01
2018 Zorz JK, Kozlowski JA, Stein LY, Strous M, Kleiner M. Comparative Proteomics of Three Species of Ammonia-Oxidizing Bacteria. Frontiers in Microbiology. 9: 938. PMID 29867847 DOI: 10.3389/Fmicb.2018.00938  1
2018 Orata FD, Kits KD, Stein LY. Complete Genome Sequence of Methylomonas denitrificans Strain FJG1, an Obligate Aerobic Methanotroph That Can Couple Methane Oxidation with Denitrification. Genome Announcements. 6. PMID 29700144 DOI: 10.1128/Genomea.00276-18  1
2017 Stein LY. Resolving N2 O Respiration Pathways: a Tale of Two NosZ Clades. Environmental Microbiology. PMID 29076635 DOI: 10.1111/1462-2920.13969  0.01
2017 Kits KD, Sedlacek CJ, Lebedeva EV, Han P, Bulaev A, Pjevac P, Daebeler A, Romano S, Albertsen M, Stein LY, Daims H, Wagner M. Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle. Nature. PMID 28847001 DOI: 10.1038/Nature23679  1
2017 Frindte K, Kalyuzhnaya MG, Bringel F, Dunfield PF, Jetten MSM, Khmelenina VN, Klotz MG, Murrell JC, Op den Camp HJM, Sakai Y, Semrau JD, Shapiro N, DiSpirito AA, Stein LY, Svenning MM, et al. Draft Genome Sequences of Two Gammaproteobacterial Methanotrophs Isolated from Rice Ecosystems. Genome Announcements. 5. PMID 28818885 DOI: 10.1128/Genomea.00526-17  1
2017 Rice MC, Norton JM, Stein LY, Kozlowski J, Bollmann A, Klotz MG, Sayavedra-Soto L, Shapiro N, Goodwin LA, Huntemann M, Clum A, Pillay M, Varghese N, Mikhailova N, Palaniappan K, et al. Complete Genome Sequence of Nitrosomonas cryotolerans ATCC 49181, a Phylogenetically Distinct Ammonia-Oxidizing Bacterium Isolated from Arctic Waters. Genome Announcements. 5. PMID 28302769 DOI: 10.1128/Genomea.00011-17  1
2017 Stein LY. Methylamine: A vital nitrogen (and carbon) source for marine microbes. Environmental Microbiology. PMID 28256063 DOI: 10.1111/1462-2920.13716  0.01
2016 Stein LY. Accessories Make the Microbe. Environmental Microbiology Reports. PMID 27775875 DOI: 10.1111/1758-2229.12492  0.01
2016 Rice MC, Norton JM, Valois F, Bollmann A, Bottomley PJ, Klotz MG, Laanbroek HJ, Suwa Y, Stein LY, Sayavedra-Soto L, Woyke T, Shapiro N, Goodwin LA, Huntemann M, Clum A, et al. Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil. Standards in Genomic Sciences. 11: 46. PMID 27471578 DOI: 10.1186/S40793-016-0168-4  1
2016 Kozlowski JA, Kits KD, Stein LY. Comparison of Nitrogen Oxide Metabolism among Diverse Ammonia-Oxidizing Bacteria. Frontiers in Microbiology. 7: 1090. PMID 27462312 DOI: 10.3389/Fmicb.2016.01090  1
2016 Kozlowski JA, Kits KD, Stein LY. Complete Genome Sequence of Nitrosomonas ureae Strain Nm10, an Oligotrophic Group 6a Nitrosomonad. Genome Announcements. 4. PMID 26966201 DOI: 10.1128/Genomea.00094-16  1
2016 Lehtovirta-Morley LE, Sayavedra-Soto LA, Gallois N, Schouten S, Stein LY, Prosser JI, Nicol GW. Identifying potential mechanisms enabling acidophily in the ammonia-oxidising archaeon 'Candidatus Nitrosotalea devanaterra'. Applied and Environmental Microbiology. PMID 26896134 DOI: 10.1128/Aem.04031-15  1
2016 Kozlowski JA, Stieglmeier M, Schleper C, Klotz MG, Stein LY. Pathways and key intermediates required for obligate aerobic ammonia-dependent chemolithotrophy in bacteria and Thaumarchaeota. The Isme Journal. PMID 26882267 DOI: 10.1038/Ismej.2016.2  1
2016 Stein LY, Klotz MG. The nitrogen cycle. Current Biology : Cb. 26: R94-8. PMID 26859274 DOI: 10.1016/J.Cub.2015.12.021  1
2016 Flynn JD, Hirayama H, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Khmelenina VN, Trotsenko YA, Murrell JC, Semrau JD, Svenning MM, Stein LY, Kyrpides N, et al. Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems. Genome Announcements. 4. PMID 26798114 DOI: 10.1128/Genomea.01629-15  1
2016 Kozlowski JA, Kits KD, Stein LY. Genome Sequence of Nitrosomonas communis Strain Nm2, a Mesophilic Ammonia-Oxidizing Bacterium Isolated from Mediterranean Soil. Genome Announcements. 4. PMID 26769932 DOI: 10.1128/Genomea.01541-15  1
2015 Kits KD, Campbell DJ, Rosana AR, Stein LY. Diverse electron sources support denitrification under hypoxia in the obligate methanotroph Methylomicrobium album strain BG8. Frontiers in Microbiology. 6: 1072. PMID 26500622 DOI: 10.3389/Fmicb.2015.01072  1
2015 Stein LY. Microbiology: Cyanate fuels the nitrogen cycle. Nature. 524: 43-4. PMID 26222024 DOI: 10.1038/Nature14639  1
2015 Hamilton R, Kits KD, Ramonovskaya VA, Rozova ON, Yurimoto H, Iguchi H, Khmelenina VN, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Bringel F, Vuilleumier S, ... Stein LY, et al. Draft genomes of gammaproteobacterial methanotrophs isolated from terrestrial ecosystems. Genome Announcements. 3. PMID 26044417 DOI: 10.1128/Genomea.00515-15  1
2015 Kits KD, Klotz MG, Stein LY. Methane oxidation coupled to nitrate reduction under hypoxia by the Gammaproteobacterium Methylomonas denitrificans, sp. nov. type strain FJG1. Environmental Microbiology. PMID 25580993 DOI: 10.1111/1462-2920.12772  1
2015 Urakawa H, Garcia JC, Nielsen JL, Le VQ, Kozlowski JA, Stein LY, Lim CK, Pommerening-Röser A, Martens-Habbena W, Stahl DA, Klotz MG. Nitrosospira lacus sp. nov., a psychrotolerant, ammonia-oxidizing bacterium from sandy lake sediment. International Journal of Systematic and Evolutionary Microbiology. 65: 242-50. PMID 25336720 DOI: 10.1099/Ijs.0.070789-0  1
2014 Cua LS, Stein LY. Characterization of denitrifying activity by the alphaproteobacterium, Sphingomonas wittichii RW1. Frontiers in Microbiology. 5: 404. PMID 25147547 DOI: 10.3389/Fmicb.2014.00404  1
2014 Kozlowski JA, Price J, Stein LY. Revision of N2O-producing pathways in the ammonia-oxidizing bacterium Nitrosomonas europaea ATCC 19718. Applied and Environmental Microbiology. 80: 4930-5. PMID 24907318 DOI: 10.1128/Aem.01061-14  1
2014 Prosser JI, Head IM, Stein LY. The family Nitrosomonadaceae The Prokaryotes: Alphaproteobacteria and Betaproteobacteria. 2147483647: 901-918. DOI: 10.1007/978-3-642-30197-1_372  1
2013 Garcia JC, Urakawa H, Le VQ, Stein LY, Klotz MG, Nielsen JL. Draft Genome Sequence of Nitrosospira sp. Strain APG3, a Psychrotolerant Ammonia-Oxidizing Bacterium Isolated from Sandy Lake Sediment. Genome Announcements. 1. PMID 24201205 DOI: 10.1128/Genomea.00930-13  1
2013 Stein LY, Campbell MA, Klotz MG. Energy-mediated vs. ammonium-regulated gene expression in the obligate ammonia-oxidizing bacterium, Nitrosococcus oceani. Frontiers in Microbiology. 4: 277. PMID 24062734 DOI: 10.3389/Fmicb.2013.00277  1
2013 Bollmann A, Sedlacek CJ, Norton J, Laanbroek HJ, Suwa Y, Stein LY, Klotz MG, Arp D, Sayavedra-Soto L, Lu M, Bruce D, Detter C, Tapia R, Han J, Woyke T, et al. Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations. Standards in Genomic Sciences. 7: 469-82. PMID 24019993 DOI: 10.4056/Sigs.3517166  1
2013 Khmelenina VN, Beck DA, Munk C, Davenport K, Daligault H, Erkkila T, Goodwin L, Gu W, Lo CC, Scholz M, Teshima H, Xu Y, Chain P, Bringel F, Vuilleumier S, ... Stein LY, et al. Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium. Genome Announcements. 1. PMID 23814105 DOI: 10.1128/Genomea.00053-13  1
2013 Kits KD, Kalyuzhnaya MG, Klotz MG, Jetten MS, Op den Camp HJ, Vuilleumier S, Bringel F, Dispirito AA, Murrell JC, Bruce D, Cheng JF, Copeland A, Goodwin L, Hauser L, Lajus A, ... Stein LY, et al. Genome Sequence of the Obligate Gammaproteobacterial Methanotroph Methylomicrobium album Strain BG8. Genome Announcements. 1: e0017013. PMID 23580712 DOI: 10.1128/Genomea.00170-13  1
2013 Matsen JB, Yang S, Stein LY, Beck D, Kalyuzhnaya MG. Global Molecular Analyses of Methane Metabolism in Methanotrophic Alphaproteobacterium, Methylosinus trichosporium OB3b. Part I: Transcriptomic Study. Frontiers in Microbiology. 4: 40. PMID 23565111 DOI: 10.3389/Fmicb.2013.00040  0.01
2012 Miazga-Rodriguez M, Han S, Yakiwchuk B, Wei K, English C, Bourn S, Bohnert S, Stein LY. Enhancing nitrification at low temperature with zeolite in a mining operations retention pond. Frontiers in Microbiology. 3: 271. PMID 22866052 DOI: 10.3389/Fmicb.2012.00271  0.01
2012 Khadem AF, Wieczorek AS, Pol A, Vuilleumier S, Harhangi HR, Dunfield PF, Kalyuzhnaya MG, Murrell JC, Francoijs KJ, Stunnenberg HG, Stein LY, DiSpirito AA, Semrau JD, Lajus A, Médigue C, et al. Draft genome sequence of the volcano-inhabiting thermoacidophilic methanotroph Methylacidiphilum fumariolicum strain SolV. Journal of Bacteriology. 194: 3729-30. PMID 22740660 DOI: 10.1128/Jb.00501-12  1
2012 Kartal B, Wessels HJ, van der Biezen E, Francoijs KJ, Jetten MS, Klotz MG, Stein LY. Effects of nitrogen dioxide and anoxia on global gene and protein expression in long-term continuous cultures of Nitrosomonas eutropha C91. Applied and Environmental Microbiology. 78: 4788-94. PMID 22562996 DOI: 10.1128/Aem.00668-12  1
2012 Vuilleumier S, Khmelenina VN, Bringel F, Reshetnikov AS, Lajus A, Mangenot S, Rouy Z, Op den Camp HJ, Jetten MS, Dispirito AA, Dunfield P, Klotz MG, Semrau JD, Stein LY, Barbe V, et al. Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z. Journal of Bacteriology. 194: 551-2. PMID 22207753 DOI: 10.1128/Jb.06392-11  1
2011 Boden R, Cunliffe M, Scanlan J, Moussard H, Kits KD, Klotz MG, Jetten MS, Vuilleumier S, Han J, Peters L, Mikhailova N, Teshima H, Tapia R, Kyrpides N, Ivanova N, ... Stein L, et al. Complete genome sequence of the aerobic marine methanotroph Methylomonas methanica MC09. Journal of Bacteriology. 193: 7001-2. PMID 22123758 DOI: 10.1128/Jb.06267-11  1
2011 Chandran K, Stein LY, Klotz MG, van Loosdrecht MC. Nitrous oxide production by lithotrophic ammonia-oxidizing bacteria and implications for engineered nitrogen-removal systems. Biochemical Society Transactions. 39: 1832-7. PMID 22103535 DOI: 10.1042/Bst20110717  1
2011 Stein LY, Klotz MG. Nitrifying and denitrifying pathways of methanotrophic bacteria. Biochemical Society Transactions. 39: 1826-31. PMID 22103534 DOI: 10.1042/Bst20110712  1
2011 Suwa Y, Yuichi S, Norton JM, Bollmann A, Klotz MG, Stein LY, Laanbroek HJ, Arp DJ, Goodwin LA, Chertkov O, Held B, Bruce D, Detter JC, Detter JC, Tapia R, et al. Genome sequence of Nitrosomonas sp. strain AL212, an ammonia-oxidizing bacterium sensitive to high levels of ammonia. Journal of Bacteriology. 193: 5047-8. PMID 21868805 DOI: 10.1128/Jb.05521-11  1
2011 Stein LY, Nicol GW. Grand challenges in terrestrial microbiology. Frontiers in Microbiology. 2: 6. PMID 21747779 DOI: 10.3389/Fmicb.2011.00006  0.01
2011 Svenning MM, Hestnes AG, Wartiainen I, Stein LY, Klotz MG, Kalyuzhnaya MG, Spang A, Bringel F, Vuilleumier S, Lajus A, Médigue C, Bruce DC, Cheng JF, Goodwin L, Ivanova N, et al. Genome sequence of the Arctic methanotroph Methylobacter tundripaludum SV96. Journal of Bacteriology. 193: 6418-9. PMID 21725021 DOI: 10.1128/Jb.05380-11  1
2011 Campbell MA, Nyerges G, Kozlowski JA, Poret-Peterson AT, Stein LY, Klotz MG. Model of the molecular basis for hydroxylamine oxidation and nitrous oxide production in methanotrophic bacteria. Fems Microbiology Letters. 322: 82-9. PMID 21682764 DOI: 10.1111/J.1574-6968.2011.02340.X  1
2011 Stein LY, Klotz MG. Research on nitrification and related processes, Part B. Preface. Methods in Enzymology. 496: xix-xx. PMID 21514457 DOI: 10.1016/B978-0-12-386489-5.00027-0  1
2011 Cua LS, Stein LY. Effects of nitrite on ammonia-oxidizing activity and gene regulation in three ammonia-oxidizing bacteria. Fems Microbiology Letters. 319: 169-75. PMID 21470297 DOI: 10.1111/J.1574-6968.2011.02277.X  1
2011 Stein LY, Bringel F, DiSpirito AA, Han S, Jetten MS, Kalyuzhnaya MG, Kits KD, Klotz MG, Op den Camp HJ, Semrau JD, Vuilleumier S, Bruce DC, Cheng JF, Davenport KW, Goodwin L, et al. Genome sequence of the methanotrophic alphaproteobacterium Methylocystis sp. strain Rockwell (ATCC 49242). Journal of Bacteriology. 193: 2668-9. PMID 21441518 DOI: 10.1128/Jb.00278-11  1
2011 Sayavedra-Soto LA, Stein LY. Genetic transformation of ammonia-oxidizing bacteria. Methods in Enzymology. 486: 389-402. PMID 21185445 DOI: 10.1016/B978-0-12-381294-0.00017-1  1
2011 Stein LY. Surveying N2O-producing pathways in bacteria. Methods in Enzymology. 486: 131-52. PMID 21185434 DOI: 10.1016/B978-0-12-381294-0.00006-7  0.01
2010 Stein LY, Yoon S, Semrau JD, Dispirito AA, Crombie A, Murrell JC, Vuilleumier S, Kalyuzhnaya MG, Op den Camp HJ, Bringel F, Bruce D, Cheng JF, Copeland A, Goodwin L, Han S, et al. Genome sequence of the obligate methanotroph Methylosinus trichosporium strain OB3b. Journal of Bacteriology. 192: 6497-8. PMID 20952571 DOI: 10.1128/Jb.01144-10  1
2010 Nyerges G, Han SK, Stein LY. Effects of ammonium and nitrite on growth and competitive fitness of cultivated methanotrophic bacteria. Applied and Environmental Microbiology. 76: 5648-51. PMID 20601518 DOI: 10.1128/Aem.00747-10  1
2009 Nyerges G, Stein LY. Ammonia cometabolism and product inhibition vary considerably among species of methanotrophic bacteria. Fems Microbiology Letters. 297: 131-6. PMID 19566684 DOI: 10.1111/J.1574-6968.2009.01674.X  1
2009 Campbell BJ, Smith JL, Hanson TE, Klotz MG, Stein LY, Lee CK, Wu D, Robinson JM, Khouri HM, Eisen JA, Cary SC. Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola. Plos Genetics. 5: e1000362. PMID 19197347 DOI: 10.1371/Journal.Pgen.1000362  1
2008 Norton JM, Klotz MG, Stein LY, Arp DJ, Bottomley PJ, Chain PS, Hauser LJ, Land ML, Larimer FW, Shin MW, Starkenburg SR. Complete genome sequence of Nitrosospira multiformis, an ammonia-oxidizing bacterium from the soil environment. Applied and Environmental Microbiology. 74: 3559-72. PMID 18390676 DOI: 10.1128/Aem.02722-07  1
2008 Starkenburg SR, Larimer FW, Stein LY, Klotz MG, Chain PS, Sayavedra-Soto LA, Poret-Peterson AT, Gentry ME, Arp DJ, Ward B, Bottomley PJ. Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter. Applied and Environmental Microbiology. 74: 2852-63. PMID 18326675 DOI: 10.1128/Aem.02311-07  1
2008 Klotz MG, Stein LY. Nitrifier genomics and evolution of the nitrogen cycle. Fems Microbiology Letters. 278: 146-56. PMID 18031536 DOI: 10.1111/J.1574-6968.2007.00970.X  1
2007 Stein LY, Arp DJ, Berube PM, Chain PS, Hauser L, Jetten MS, Klotz MG, Larimer FW, Norton JM, Op den Camp HJ, Shin M, Wei X. Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation. Environmental Microbiology. 9: 2993-3007. PMID 17991028 DOI: 10.1111/J.1462-2920.2007.01409.X  1
2007 Cantera JJ, Stein LY. Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea. Archives of Microbiology. 188: 349-54. PMID 17541778 DOI: 10.1007/S00203-007-0255-4  0.01
2007 Cantera JJ, Stein LY. Molecular diversity of nitrite reductase genes (nirK) in nitrifying bacteria. Environmental Microbiology. 9: 765-76. PMID 17298375 DOI: 10.1111/J.1462-2920.2006.01198.X  0.01
2006 Cho CM, Yan T, Liu X, Wu L, Zhou J, Stein LY. Transcriptome of a Nitrosomonas europaea mutant with a disrupted nitrite reductase gene (nirK). Applied and Environmental Microbiology. 72: 4450-4. PMID 16751567 DOI: 10.1128/Aem.02958-05  0.01
2006 Cantera JJL, Jordan FL, Stein LY. Effects of irrigation sources on ammonia-oxidizing bacterial communities in a managed turf-covered aridisol Biology and Fertility of Soils. 43: 247-255. DOI: 10.1007/S00374-006-0101-X  1
2005 Jordan FL, Cantera JJ, Fenn ME, Stein LY. Autotrophic ammonia-oxidizing bacteria contribute minimally to nitrification in a nitrogen-impacted forested ecosystem. Applied and Environmental Microbiology. 71: 197-206. PMID 15640188 DOI: 10.1128/Aem.71.1.197-206.2005  1
2003 Arp DJ, Stein LY. Metabolism of inorganic N compounds by ammonia-oxidizing bacteria. Critical Reviews in Biochemistry and Molecular Biology. 38: 471-95. PMID 14695127 DOI: 10.1080/10409230390267446  1
2002 Stein LY, Jones G, Alexander B, Elmund K, Wright-Jones C, Nealson KH. Intriguing microbial diversity associated with metal-rich particles from a freshwater reservoir. Fems Microbiology Ecology. 42: 431-40. PMID 19709302 DOI: 10.1111/J.1574-6941.2002.Tb01032.X  1
2001 Stein LY, La Duc MT, Grund TJ, Nealson KH. Bacterial and archaeal populations associated with freshwater ferromanganous micronodules and sediments Environmental Microbiology. 3: 10-18. PMID 11225719 DOI: 10.1046/J.1462-2920.2001.00154.X  1
2000 Stein LY, Sayavedra-Soto LA, Hommes NG, Arp DJ. Differential regulation of amoA and amoB gene copies in Nitrosomonas europaea Fems Microbiology Letters. 192: 163-168. PMID 11064189 DOI: 10.1111/J.1574-6968.2000.Tb09376.X  1
1998 Stein LY, Arp DJ. Ammonium Limitation Results in the Loss of Ammonia-Oxidizing Activity in Nitrosomonas europaea. Applied and Environmental Microbiology. 64: 1514-21. PMID 16349550 DOI: 10.1128/Aem.64.4.1514-1521.1998  1
1998 Stein LY, Arp DJ. Ammonium limitation results in the loss of ammonia oxidizing activity in Nitrosomonas europaea Applied and Environmental Microbiology. 64: 1514-1521.  1
1997 Stein LY, Arp DJ, Hyman MR. Regulation of the synthesis and activity of ammonia monooxygenase in Nitrosomonas europaea by altering pH to affect NH3 availability Applied and Environmental Microbiology. 63: 4588-4592.  1
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