Martin S. Pavelka - Publications

University of Rochester, Rochester, NY 
Microbiology Biology

39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Francis ZK, Sanders AN, Crick DC, Mahapatra S, Islam MN, Pavelka MS. LdtC Is a Key l,d-Transpeptidase for Peptidoglycan Assembly in Mycobacterium smegmatis. Journal of Bacteriology. e0042422. PMID 36541811 DOI: 10.1128/jb.00424-22  0.702
2019 Pidgeon SE, Apostolos AJ, Nelson JM, Shaku M, Rimal B, Islam MN, Crick DC, Kim SJ, Pavelka MS, Kana BD, Pires MM. L,D-transpeptidase Specific Probe Reveals Spatial Activity of Peptidoglycan Crosslinking. Acs Chemical Biology. PMID 31487148 DOI: 10.1021/Acschembio.9B00427  0.438
2018 Wlodarchak N, Teachout N, Beczkiewicz J, Procknow R, Schaenzer AJ, Satyshur K, Pavelka M, Zuercher W, Drewry D, Sauer JD, Striker R. An in silico screen and structural analysis identifies bacterial kinase inhibitors which act with β-lactams to inhibit mycobacterial growth. Molecular Pharmaceutics. PMID 30285456 DOI: 10.1021/Acs.Molpharmaceut.8B00905  0.317
2018 Edholm ES, Banach M, Hyoe Rhoo K, Pavelka MS, Robert J. Distinct MHC class I-like interacting invariant T cell lineage at the forefront of mycobacterial immunity uncovered in. Proceedings of the National Academy of Sciences of the United States of America. PMID 29610296 DOI: 10.1073/Pnas.1722129115  0.355
2017 Gregoire SA, Byam J, Pavelka MS. galK-based suicide vector mediated allelic exchange in Mycobacterium abscessus. Microbiology (Reading, England). PMID 28933689 DOI: 10.1099/Mic.0.000528  0.451
2016 Martinelli DJ, Pavelka MS. The RipA and RipB peptidoglycan endopeptidases are individually non-essential to Mycobacterium smegmatis. Journal of Bacteriology. PMID 26977111 DOI: 10.1128/Jb.00059-16  0.526
2015 Pavelka MS. One of these is not like the others. Trends in Microbiology. 23: 668-70. PMID 26439291 DOI: 10.1016/J.Tim.2015.09.005  0.423
2015 LoVullo ED, Wright LF, Isabella V, Huntley JF, Pavelka MS. Revisiting the Gram-negative lipoprotein paradigm. Journal of Bacteriology. 197: 1705-15. PMID 25755189 DOI: 10.1128/Jb.02414-14  0.419
2015 Jin G, Pavelka MS, Butler JS. Structure-function analysis of VapB4 antitoxin identifies critical features of a minimal VapC4 toxin-binding module. Journal of Bacteriology. 197: 1197-207. PMID 25622615 DOI: 10.1128/Jb.02508-14  0.372
2014 Pavelka MS, Mahapatra S, Crick DC. Genetics of Peptidoglycan Biosynthesis. Microbiology Spectrum. 2. PMID 26104213 DOI: 10.1128/Microbiolspec.Mgm2-0034-2013  0.405
2014 Sanders AN, Wright LF, Pavelka MS. Genetic characterization of mycobacterial L,D-transpeptidases. Microbiology (Reading, England). 160: 1795-806. PMID 24855140 DOI: 10.1099/Mic.0.078980-0  0.695
2013 Feiler C, Fisher AC, Boock JT, Marrichi MJ, Wright L, Schmidpeter PA, Blankenfeldt W, Pavelka M, DeLisa MP. Directed evolution of Mycobacterium tuberculosis β-lactamase reveals gatekeeper residue that regulates antibiotic resistance and catalytic efficiency. Plos One. 8: e73123. PMID 24023821 DOI: 10.1371/Journal.Pone.0073123  0.506
2013 Sanders AN, Pavelka MS. Phenotypic analysis of Eschericia coli mutants lacking L,D-transpeptidases. Microbiology (Reading, England). 159: 1842-52. PMID 23832002 DOI: 10.1099/Mic.0.069211-0  0.689
2013 Slayden RA, Jackson M, Zucker J, Ramirez MV, Dawson CC, Crew R, Sampson NS, Thomas ST, Jamshidi N, Sisk P, Caspi R, Crick DC, McNeil MR, Pavelka MS, Niederweis M, et al. Updating and curating metabolic pathways of TB. Tuberculosis (Edinburgh, Scotland). 93: 47-59. PMID 23375378 DOI: 10.1016/J.Tube.2012.11.001  0.356
2013 Mahapatra S, Piechota C, Gil F, Ma Y, Huang H, Scherman MS, Jones V, Pavelka MS, Moniz-Pereira J, Pimentel M, McNeil MR, Crick DC. Mycobacteriophage Ms6 LysA: a peptidoglycan amidase and a useful analytical tool. Applied and Environmental Microbiology. 79: 768-73. PMID 23160121 DOI: 10.1128/Aem.02263-12  0.489
2012 LoVullo ED, Miller CN, Pavelka MS, Kawula TH. TetR-based gene regulation systems for Francisella tularensis. Applied and Environmental Microbiology. 78: 6883-9. PMID 22820330 DOI: 10.1128/Aem.01679-12  0.363
2010 Patru MM, Pavelka MS. A role for the class A penicillin-binding protein PonA2 in the survival of Mycobacterium smegmatis under conditions of nonreplication. Journal of Bacteriology. 192: 3043-54. PMID 20400545 DOI: 10.1128/Jb.00025-10  0.427
2009 LoVullo ED, Molins-Schneekloth CR, Schweizer HP, Pavelka MS. Single-copy chromosomal integration systems for Francisella tularensis. Microbiology (Reading, England). 155: 1152-63. PMID 19332817 DOI: 10.1099/Mic.0.022491-0  0.367
2009 LoVullo ED, Sherrill LA, Pavelka MS. Improved shuttle vectors for Francisella tularensis genetics. Fems Microbiology Letters. 291: 95-102. PMID 19067747 DOI: 10.1111/J.1574-6968.2008.01440.X  0.329
2008 Pavelka MS. Allelic exchange of unmarked mutations in Mycobacterium tuberculosis. Methods in Molecular Biology (Clifton, N.J.). 435: 191-201. PMID 18370077 DOI: 10.1007/978-1-59745-232-8_14  0.332
2007 McCann JR, McDonough JA, Pavelka MS, Braunstein M. β-Lactamase can function as a reporter of bacterial protein export during Mycobacterium tuberculosis infection of host cells Microbiology. 153: 3350-3359. PMID 17906134 DOI: 10.1099/Mic.0.2007/008516-0  0.366
2007 Kincaid EZ, Wolf AJ, Desvignes L, Mahapatra S, Crick DC, Brennan PJ, Pavelka MS, Ernst JD. Codominance of TLR2-dependent and TLR2-independent modulation of MHC class II in Mycobacterium tuberculosis infection in vivo. Journal of Immunology (Baltimore, Md. : 1950). 179: 3187-95. PMID 17709534 DOI: 10.4049/Jimmunol.179.5.3187  0.31
2007 Pavelka MS. Another brick in the wall. Trends in Microbiology. 15: 147-9. PMID 17331730 DOI: 10.1016/J.Tim.2007.02.003  0.33
2006 LoVullo ED, Sherrill LA, Perez LL, Pavelka MS. Genetic tools for highly pathogenic Francisella tularensis subsp. tularensis. Microbiology (Reading, England). 152: 3425-35. PMID 17074911 DOI: 10.1099/Mic.0.29121-0  0.398
2005 McDonough JA, Hacker KE, Flores AR, Pavelka MS, Braunstein M. The twin-arginine translocation pathway of Mycobacterium smegmatis is functional and required for the export of mycobacterial β-lactamases Journal of Bacteriology. 187: 7667-7679. PMID 16267291 DOI: 10.1128/Jb.187.22.7667-7679.2005  0.451
2005 Flores AR, Parsons LM, Pavelka MS. Characterization of novel Mycobacterium tuberculosis and Mycobacterium smegmatis mutants hypersusceptible to beta-lactam antibiotics. Journal of Bacteriology. 187: 1892-900. PMID 15743935 DOI: 10.1128/Jb.187.6.1892-1900.2005  0.453
2005 Consaul SA, Wright LF, Mahapatra S, Crick DC, Pavelka MS. An unusual mutation results in the replacement of diaminopimelate with lanthionine in the peptidoglycan of a mutant strain of Mycobacterium smegmatis. Journal of Bacteriology. 187: 1612-20. PMID 15716431 DOI: 10.1128/Jb.187.5.1612-1620.2005  0.549
2005 Flores AR, Parsons LM, Pavelka MS. Genetic analysis of the beta-lactamases of Mycobacterium tuberculosis and Mycobacterium smegmatis and susceptibility to beta-lactam antibiotics. Microbiology (Reading, England). 151: 521-32. PMID 15699201 DOI: 10.1099/Mic.0.27629-0  0.369
2005 Raymond JB, Mahapatra S, Crick DC, Pavelka MS. Identification of the namH gene, encoding the hydroxylase responsible for the N-glycolylation of the mycobacterial peptidoglycan. The Journal of Biological Chemistry. 280: 326-33. PMID 15522883 DOI: 10.1074/Jbc.M411006200  0.363
2004 Consaul SA, Pavelka MS. Use of a novel allele of the Escherichia coli aacC4 aminoglycoside resistance gene as a genetic marker in mycobacteria. Fems Microbiology Letters. 234: 297-301. PMID 15135536 DOI: 10.1111/J.1574-6968.2004.Tb09547.X  0.442
2003 Raymond JB, Price NP, Pavelka MS. A method for the enzymatic synthesis and HPLC purification of the peptidoglycan precursor UDP-N-acetylmuramic acid. Fems Microbiology Letters. 229: 83-9. PMID 14659546 DOI: 10.1016/S0378-1097(03)00793-6  0.386
2003 Consaul SA, Jacobs WR, Pavelka MS. Extragenic suppression of the requirement for diaminopimelate in diaminopimelate auxotrophs of Mycobacterium smegmatis. Fems Microbiology Letters. 225: 131-5. PMID 12900031 DOI: 10.1016/S0378-1097(03)00502-0  0.535
2003 Pavelka MS, Chen B, Kelley CL, Collins FM, Jacobs Jr WR. Vaccine efficacy of a lysine auxotroph of Mycobacterium tuberculosis. Infection and Immunity. 71: 4190-2. PMID 12819116 DOI: 10.1128/Iai.71.7.4190-4192.2003  0.312
2003 Gokulan K, Rupp B, Pavelka MS, Jacobs WR, Sacchettini JC. Crystal structure of Mycobacterium tuberculosis diaminopimelate decarboxylase, an essential enzyme in bacterial lysine biosynthesis. The Journal of Biological Chemistry. 278: 18588-96. PMID 12637582 DOI: 10.1074/Jbc.M301549200  0.469
1999 Pavelka MS, Jacobs WR. Comparison of the construction of unmarked deletion mutations in Mycobacterium smegmatis, Mycobacterium bovis bacillus Calmette-Guérin, and Mycobacterium tuberculosis H37Rv by allelic exchange. Journal of Bacteriology. 181: 4780-9. PMID 10438745 DOI: 10.1128/Jb.181.16.4780-4789.1999  0.504
1997 Pavelka MS, Weisbrod TR, Jacobs WR. Cloning of the dapB gene, encoding dihydrodipicolinate reductase, from Mycobacterium tuberculosis. Journal of Bacteriology. 179: 2777-82. PMID 9098082 DOI: 10.1128/Jb.179.8.2777-2782.1997  0.473
1997 Pavelka MS, Jacobs WR. Biosynthesis of diaminopimelate, the precursor of lysine and a component of peptidoglycan, is an essential function of Mycobacterium smegmatis. Journal of Bacteriology. 178: 6496-507. PMID 8932306 DOI: 10.1128/Jb.178.22.6496-6507.1996  0.522
1996 Balasubramanian V, Pavelka MS, Bardarov SS, Martin J, Weisbrod TR, McAdam RA, Bloom BR, Jacobs WR. Allelic exchange in Mycobacterium tuberculosis with long linear recombination substrates. Journal of Bacteriology. 178: 273-9. PMID 8550428 DOI: 10.1128/Jb.178.1.273-279.1996  0.485
1991 Pavelka MS, Wright LF, Silver RP. Identification of two genes, kpsM and kpsT, in region 3 of the polysialic acid gene cluster of Escherichia coli K1 Journal of Bacteriology. 173: 4603-4610. PMID 1856162 DOI: 10.1128/Jb.173.15.4603-4610.1991  0.371
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