Roderick I. Mackie - Publications

Affiliations: 
University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
Microbiology Biology

85 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Greening C, Geier R, Wang C, Woods LC, Morales SE, McDonald MJ, Rushton-Green R, Morgan XC, Koike S, Leahy SC, Kelly WJ, Cann I, Attwood GT, Cook GM, Mackie RI. Diverse hydrogen production and consumption pathways influence methane production in ruminants. The Isme Journal. PMID 31243332 DOI: 10.1038/s41396-019-0464-2  0.36
2015 Amato KR, Leigh SR, Kent A, Mackie RI, Yeoman CJ, Stumpf RM, Wilson BA, Nelson KE, White BA, Garber PA. The gut microbiota appears to compensate for seasonal diet variation in the wild black howler monkey (Alouatta pigra). Microbial Ecology. 69: 434-43. PMID 25524570 DOI: 10.1007/s00248-014-0554-7  0.56
2015 Hong PY, Mao Y, Ortiz-Kofoed S, Shah R, Cann I, Mackie RI. Metagenomic-based study of the phylogenetic and functional gene diversity in galápagos land and marine iguanas. Microbial Ecology. 69: 444-56. PMID 25524569 DOI: 10.1007/s00248-014-0547-6  0.56
2014 Li X, Rui J, Xiong J, Li J, He Z, Zhou J, Yannarell AC, Mackie RI. Functional potential of soil microbial communities in the maize rhizosphere. Plos One. 9: e112609. PMID 25383887 DOI: 10.1371/journal.pone.0112609  0.56
2014 Chekan JR, Kwon IH, Agarwal V, Dodd D, Revindran V, Mackie RI, Cann I, Nair SK. Structural and biochemical basis for mannan utilization by Caldanaerobius polysaccharolyticus strain ATCC BAA-17. The Journal of Biological Chemistry. 289: 34965-77. PMID 25342756 DOI: 10.1074/jbc.M114.579904  0.56
2014 Dong Y, Sanford RA, Locke RA, Cann IK, Mackie RI, Fouke BW. Fe-oxide grain coatings support bacterial Fe-reducing metabolisms in 1.7-2.0 km-deep subsurface quartz arenite sandstone reservoirs of the Illinois Basin (USA). Frontiers in Microbiology. 5: 511. PMID 25324834 DOI: 10.3389/fmicb.2014.00511  0.56
2014 Amato KR, Leigh SR, Kent A, Mackie RI, Yeoman CJ, Stumpf RM, Wilson BA, Nelson KE, White BA, Garber PA. The role of gut microbes in satisfying the nutritional demands of adult and juvenile wild, black howler monkeys (Alouatta pigra). American Journal of Physical Anthropology. 155: 652-64. PMID 25252073 DOI: 10.1002/ajpa.22621  0.56
2014 Zheng Y, Kahnt J, Kwon IH, Mackie RI, Thauer RK. Hydrogen formation and its regulation in Ruminococcus albus: involvement of an electron-bifurcating [FeFe]-hydrogenase, of a non-electron-bifurcating [FeFe]-hydrogenase, and of a putative hydrogen-sensing [FeFe]-hydrogenase. Journal of Bacteriology. 196: 3840-52. PMID 25157086 DOI: 10.1128/JB.02070-14  0.56
2014 Zhang M, Chekan JR, Dodd D, Hong PY, Radlinski L, Revindran V, Nair SK, Mackie RI, Cann I. Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes. Proceedings of the National Academy of Sciences of the United States of America. 111: E3708-17. PMID 25136124 DOI: 10.1073/pnas.1406156111  0.56
2014 Mao Y, Li X, Smyth EM, Yannarell AC, Mackie RI. Enrichment of specific bacterial and eukaryotic microbes in the rhizosphere of switchgrass (Panicum virgatum L.) through root exudates. Environmental Microbiology Reports. 6: 293-306. PMID 24983534 DOI: 10.1111/1758-2229.12152  0.56
2014 Glad T, Barboza P, Mackie RI, Wright AD, Brusetti L, Mathiesen SD, Sundset MA. Dietary supplementation of usnic acid, an antimicrobial compound in lichens, does not affect rumen bacterial diversity or density in reindeer. Current Microbiology. 68: 724-8. PMID 24509720 DOI: 10.1007/s00284-014-0534-7  0.4
2014 Hong PY, Iakiviak M, Dodd D, Zhang M, Mackie RI, Cann I. Two new xylanases with different substrate specificities from the human gut bacterium Bacteroides intestinalis DSM 17393. Applied and Environmental Microbiology. 80: 2084-93. PMID 24463968 DOI: 10.1128/AEM.03176-13  0.56
2014 Kohl KD, Miller AW, Marvin JE, Mackie R, Dearing MD. Herbivorous rodents (Neotoma spp.) harbour abundant and active foregut microbiota. Environmental Microbiology. 16: 2869-78. PMID 24373154 DOI: 10.1111/1462-2920.12376  0.56
2014 Dong Y, Kumar CG, Chia N, Kim PJ, Miller PA, Price ND, Cann IK, Flynn TM, Sanford RA, Krapac IG, Locke RA, Hong PY, Tamaki H, Liu WT, Mackie RI, et al. Halomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian Sandstone reservoir. Environmental Microbiology. 16: 1695-708. PMID 24238218 DOI: 10.1111/1462-2920.12325  0.56
2013 Oyama T, Schmitz GE, Dodd D, Han Y, Burnett A, Nagasawa N, Mackie RI, Nakamura H, Morikawa K, Cann I. Mutational and structural analyses of Caldanaerobius polysaccharolyticus Man5B reveal novel active site residues for family 5 glycoside hydrolases. Plos One. 8: e80448. PMID 24278284 DOI: 10.1371/journal.pone.0080448  0.56
2013 Præsteng KE, Pope PB, Cann IK, Mackie RI, Mathiesen SD, Folkow LP, Eijsink VG, Sundset MA. Probiotic dosing of Ruminococcus flavefaciens affects rumen microbiome structure and function in reindeer. Microbial Ecology. 66: 840-9. PMID 23959114 DOI: 10.1007/s00248-013-0279-z  0.4
2013 Hong PY, Yannarell AC, Dai Q, Ekizoglu M, Mackie RI. Monitoring the perturbation of soil and groundwater microbial communities due to pig production activities. Applied and Environmental Microbiology. 79: 2620-9. PMID 23396341 DOI: 10.1128/AEM.03760-12  0.56
2013 Su X, Han Y, Dodd D, Moon YH, Yoshida S, Mackie RI, Cann IK. Reconstitution of a thermostable xylan-degrading enzyme mixture from the bacterium Caldicellulosiruptor bescii. Applied and Environmental Microbiology. 79: 1481-90. PMID 23263957 DOI: 10.1128/AEM.03265-12  0.56
2013 Mao Y, Yannarell AC, Davis SC, Mackie RI. Impact of different bioenergy crops on N-cycling bacterial and archaeal communities in soil. Environmental Microbiology. 15: 928-42. PMID 22891790 DOI: 10.1111/j.1462-2920.2012.02844.x  0.56
2012 Han Y, Agarwal V, Dodd D, Kim J, Bae B, Mackie RI, Nair SK, Cann IK. Biochemical and structural insights into xylan utilization by the thermophilic bacterium Caldanaerobius polysaccharolyticus. The Journal of Biological Chemistry. 287: 34946-60. PMID 22918832 DOI: 10.1074/jbc.M112.391532  0.56
2012 Ye L, Su X, Schmitz GE, Moon YH, Zhang J, Mackie RI, Cann IK. Molecular and biochemical analyses of the GH44 module of CbMan5B/Cel44A, a bifunctional enzyme from the hyperthermophilic bacterium Caldicellulosiruptor bescii. Applied and Environmental Microbiology. 78: 7048-59. PMID 22843537 DOI: 10.1128/AEM.02009-12  0.56
2012 Kisiela DI, Chattopadhyay S, Libby SJ, Karlinsey JE, Fang FC, Tchesnokova V, Kramer JJ, Beskhlebnaya V, Samadpour M, Grzymajlo K, Ugorski M, Lankau EW, Mackie RI, Clegg S, Sokurenko EV. Evolution of Salmonella enterica virulence via point mutations in the fimbrial adhesin. Plos Pathogens. 8: e1002733. PMID 22685400 DOI: 10.1371/journal.ppat.1002733  0.56
2011 Hong PY, Croix JA, Greenberg E, Gaskins HR, Mackie RI. Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity. Plos One. 6: e25042. PMID 21966408 DOI: 10.1371/journal.pone.0025042  0.56
2011 Mao Y, Yannarell AC, Mackie RI. Changes in N-transforming archaea and bacteria in soil during the establishment of bioenergy crops. Plos One. 6: e24750. PMID 21935454 DOI: 10.1371/journal.pone.0024750  0.56
2011 Sadeghayobi E, Blake S, Wikelski M, Gibbs J, Mackie R, Cabrera F. Digesta retention time in the Galápagos tortoise (Chelonoidis nigra). Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 160: 493-7. PMID 21871577 DOI: 10.1016/j.cbpa.2011.08.008  0.56
2011 Præsteng KE, Mackie RI, Cann IK, Mathiesen SD, Sundset MA. Variations in the 16S-23S rRNA internal transcribed spacer of fibrolytic Butyrivibrio isolates from the reindeer rumen. Canadian Journal of Microbiology. 57: 617-21. PMID 21774627 DOI: 10.1139/w11-038  0.4
2011 Kabel MA, Yeoman CJ, Han Y, Dodd D, Abbas CA, de Bont JA, Morrison M, Cann IK, Mackie RI. Biochemical characterization and relative expression levels of multiple carbohydrate esterases of the xylanolytic rumen bacterium Prevotella ruminicola 23 grown on an ester-enriched substrate. Applied and Environmental Microbiology. 77: 5671-81. PMID 21742923 DOI: 10.1128/AEM.05321-11  0.56
2011 Grønvold AM, Mao Y, L'Abée-Lund TM, Sørum H, Sivertsen T, Yannarell AC, Mackie RI. Fecal microbiota of calves in the clinical setting: effect of penicillin treatment. Veterinary Microbiology. 153: 354-60. PMID 21705160 DOI: 10.1016/j.vetmic.2011.05.040  0.56
2011 Nakamura N, Amato KR, Garber P, Estrada A, Mackie RI, Gaskins HR. Analysis of the hydrogenotrophic microbiota of wild and captive black howler monkeys (Alouatta pigra) in palenque national park, Mexico. American Journal of Primatology. 73: 909-19. PMID 21557284 DOI: 10.1002/ajp.20961  0.56
2011 Hess M, Sczyrba A, Egan R, Kim TW, Chokhawala H, Schroth G, Luo S, Clark DS, Chen F, Zhang T, Mackie RI, Pennacchio LA, Tringe SG, Visel A, Woyke T, et al. Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science (New York, N.Y.). 331: 463-7. PMID 21273488 DOI: 10.1126/science.1200387  0.56
2011 Dodd D, Mackie RI, Cann IK. Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes. Molecular Microbiology. 79: 292-304. PMID 21219452 DOI: 10.1111/j.1365-2958.2010.07473.x  0.56
2010 Nakamura N, Lin HC, McSweeney CS, Mackie RI, Gaskins HR. Mechanisms of microbial hydrogen disposal in the human colon and implications for health and disease. Annual Review of Food Science and Technology. 1: 363-95. PMID 22129341 DOI: 10.1146/annurev.food.102308.124101  0.56
2010 Nelson DM, Cann IK, Mackie RI. Response of archaeal communities in the rhizosphere of maize and soybean to elevated atmospheric CO2 concentrations. Plos One. 5: e15897. PMID 21209969 DOI: 10.1371/journal.pone.0015897  0.56
2010 Su X, Agarwal V, Dodd D, Bae B, Mackie RI, Nair SK, Cann IK. Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules. The Journal of Biological Chemistry. 285: 34665-76. PMID 20739280 DOI: 10.1074/jbc.M110.168302  0.56
2010 Yoshida S, Hespen CW, Beverly RL, Mackie RI, Cann IK. Domain analysis of a modular alpha-L-Arabinofuranosidase with a unique carbohydrate binding strategy from the fiber-degrading bacterium Fibrobacter succinogenes S85. Journal of Bacteriology. 192: 5424-36. PMID 20709893 DOI: 10.1128/JB.00503-10  0.56
2010 Dodd D, Moon YH, Swaminathan K, Mackie RI, Cann IK. Transcriptomic analyses of xylan degradation by Prevotella bryantii and insights into energy acquisition by xylanolytic bacteroidetes. The Journal of Biological Chemistry. 285: 30261-73. PMID 20622018 DOI: 10.1074/jbc.M110.141788  0.56
2010 Purushe J, Fouts DE, Morrison M, White BA, Mackie RI, Coutinho PM, Henrissat B, Nelson KE. Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche. Microbial Ecology. 60: 721-9. PMID 20585943 DOI: 10.1007/s00248-010-9692-8  0.56
2010 Barboza PS, Bennett A, Lignot JH, Mackie RI, McWhorter TJ, Secor SM, Skovgaard N, Sundset MA, Wang T. Digestive challenges for vertebrate animals: Microbial diversity, cardiorespiratory coupling, and dietary specialization Physiological and Biochemical Zoology. 83: 764-774. PMID 20578844 DOI: 10.1086/650472  0.56
2010 Han Y, Dodd D, Hespen CW, Ohene-Adjei S, Schroeder CM, Mackie RI, Cann IK. Comparative analyses of two thermophilic enzymes exhibiting both beta-1,4 mannosidic and beta-1,4 glucosidic cleavage activities from Caldanaerobius polysaccharolyticus. Journal of Bacteriology. 192: 4111-21. PMID 20562312 DOI: 10.1128/JB.00257-10  0.56
2010 Nelson DM, Cann IK, Altermann E, Mackie RI. Phylogenetic evidence for lateral gene transfer in the intestine of marine iguanas. Plos One. 5: e10785. PMID 20520734 DOI: 10.1371/journal.pone.0010785  0.56
2010 Grønvold AM, L'Abée-Lund TM, Strand E, Sørum H, Yannarell AC, Mackie RI. Fecal microbiota of horses in the clinical setting: potential effects of penicillin and general anesthesia. Veterinary Microbiology. 145: 366-72. PMID 20434851 DOI: 10.1016/j.vetmic.2010.03.023  0.56
2010 Yeoman CJ, Han Y, Dodd D, Schroeder CM, Mackie RI, Cann IK. Thermostable enzymes as biocatalysts in the biofuel industry. Advances in Applied Microbiology. 70: 1-55. PMID 20359453 DOI: 10.1016/S0065-2164(10)70001-0  0.56
2010 Lin LJ, Yoshinaga A, Lin Y, Guzman C, Chen YH, Mei S, Lagunas AM, Koike S, Iwai S, Spies MA, Nair SK, Mackie RI, Ishino Y, Cann IK. Molecular analyses of an unusual translesion DNA polymerase from Methanosarcina acetivorans C2A. Journal of Molecular Biology. 397: 13-30. PMID 20080107 DOI: 10.1016/j.jmb.2010.01.007  0.56
2010 Grønvold AM, L'abée-Lund TM, Sørum H, Skancke E, Yannarell AC, Mackie RI. Changes in fecal microbiota of healthy dogs administered amoxicillin. Fems Microbiology Ecology. 71: 313-26. PMID 20002181 DOI: 10.1111/j.1574-6941.2009.00808.x  0.56
2010 Koike S, Aminov RI, Yannarell AC, Gans HD, Krapac IG, Chee-Sanford JC, Mackie RI. Molecular ecology of macrolide-lincosamide-streptogramin B methylases in waste lagoons and subsurface waters associated with swine production. Microbial Ecology. 59: 487-98. PMID 19924466 DOI: 10.1007/s00248-009-9610-0  0.56
2010 Nicholson MJ, McSweeney CS, Mackie RI, Brookman JL, Theodorou MK. Diversity of anaerobic gut fungal populations analysed using ribosomal ITS1 sequences in faeces of wild and domesticated herbivores. Anaerobe. 16: 66-73. PMID 19465140 DOI: 10.1016/j.anaerobe.2009.05.003  0.56
2009 Lamendella R, Santo Domingo JW, Yannarell AC, Ghosh S, Di Giovanni G, Mackie RI, Oerther DB. Evaluation of swine-specific PCR assays used for fecal source tracking and analysis of molecular diversity of swine-specific "bacteroidales" populations. Applied and Environmental Microbiology. 75: 5787-96. PMID 19633126 DOI: 10.1128/AEM.00448-09  0.56
2009 Nakamura N, Leigh SR, Mackie RI, Gaskins HR. Microbial community analysis of rectal methanogens and sulfate reducing bacteria in two non-human primate species. Journal of Medical Primatology. 38: 360-70. PMID 19548980 DOI: 10.1111/j.1600-0684.2009.00361.x  0.56
2009 Chee-Sanford JC, Mackie RI, Koike S, Krapac IG, Lin YF, Yannarell AC, Maxwell S, Aminov RI. Fate and transport of antibiotic residues and antibiotic resistance genes following land application of manure waste. Journal of Environmental Quality. 38: 1086-108. PMID 19398507 DOI: 10.2134/jeq2008.0128  0.56
2009 Dodd D, Kocherginskaya SA, Spies MA, Beery KE, Abbas CA, Mackie RI, Cann IK. Biochemical analysis of a beta-D-xylosidase and a bifunctional xylanase-ferulic acid esterase from a xylanolytic gene cluster in Prevotella ruminicola 23. Journal of Bacteriology. 191: 3328-38. PMID 19304844 DOI: 10.1128/JB.01628-08  0.56
2009 Nakamura N, Gaskins HR, Collier CT, Nava GM, Rai D, Petschow B, Russell WM, Harris C, Mackie RI, Wampler JL, Walker DC. Molecular ecological analysis of fecal bacterial populations from term infants fed formula supplemented with selected blends of prebiotics. Applied and Environmental Microbiology. 75: 1121-8. PMID 19088307 DOI: 10.1128/AEM.02359-07  0.56
2008 Collier CT, Hofacre CL, Payne AM, Anderson DB, Kaiser P, Mackie RI, Gaskins HR. Coccidia-induced mucogenesis promotes the onset of necrotic enteritis by supporting Clostridium perfringens growth. Veterinary Immunology and Immunopathology. 122: 104-15. PMID 18068809 DOI: 10.1016/j.vetimm.2007.10.014  0.56
2008 Zoetendal EG, Smith AH, Sundset MA, Mackie RI. The BaeSR two-component regulatory system mediates resistance to condensed tannins in Escherichia coli. Applied and Environmental Microbiology. 74: 535-9. PMID 18039828 DOI: 10.1128/AEM.02271-07  0.96
2008 Bae B, Ohene-Adjei S, Kocherginskaya S, Mackie RI, Spies MA, Cann IK, Nair SK. Molecular basis for the selectivity and specificity of ligand recognition by the family 16 carbohydrate-binding modules from Thermoanaerobacterium polysaccharolyticum ManA. The Journal of Biological Chemistry. 283: 12415-25. PMID 18025086 DOI: 10.1074/jbc.M706513200  0.56
2007 Aminov RI, Mackie RI. Evolution and ecology of antibiotic resistance genes. Fems Microbiology Letters. 271: 147-61. PMID 17490428 DOI: 10.1111/j.1574-6968.2007.00757.x  0.44
2007 Sundset MA, Praesteng KE, Cann IK, Mathiesen SD, Mackie RI. Novel rumen bacterial diversity in two geographically separated sub-species of reindeer. Microbial Ecology. 54: 424-38. PMID 17473904 DOI: 10.1007/s00248-007-9254-x  0.4
2007 Krause DO, Gaskins HR, Mackie RI. Prokaryote Diversity of Epithelial Mucosal Biofilms in the Human Digestive Tract Biofilms in the Food Environment. 127-152. DOI: 10.1002/9780470277782.ch6  0.56
2006 Mackie RI, Koike S, Krapac I, Chee-Sanford J, Maxwell S, Aminov RI. Tetracycline residues and tetracycline resistance genes in groundwater impacted by swine production facilities. Animal Biotechnology. 17: 157-76. PMID 17127527 DOI: 10.1080/10495390600956953  0.44
2005 Chen YH, Kocherginskaya SA, Lin Y, Sriratana B, Lagunas AM, Robbins JB, Mackie RI, Cann IK. Biochemical and mutational analyses of a unique clamp loader complex in the archaeon Methanosarcina acetivorans. The Journal of Biological Chemistry. 280: 41852-63. PMID 16257971 DOI: 10.1074/jbc.M508684200  0.44
2005 Amaya KR, Kocherginskaya SA, Mackie RI, Cann IK. Biochemical and mutational analysis of glutamine synthetase type III from the rumen anaerobe Ruminococcus albus 8. Journal of Bacteriology. 187: 7481-91. PMID 16237031 DOI: 10.1128/JB.187.21.7481-7491.2005  0.56
2005 Smith AH, Zoetendal E, Mackie RI. Bacterial mechanisms to overcome inhibitory effects of dietary tannins. Microbial Ecology. 50: 197-205. PMID 16222487 DOI: 10.1007/s00248-004-0180-x  0.96
2004 Zoetendal EG, Cheng B, Koike S, Mackie RI. Molecular microbial ecology of the gastrointestinal tract: from phylogeny to function. Current Issues in Intestinal Microbiology. 5: 31-47. PMID 15460065  0.4
2004 McMahon KD, Zheng D, Stams AJ, Mackie RI, Raskin L. Microbial population dynamics during start-up and overload conditions of anaerobic digesters treating municipal solid waste and sewage sludge. Biotechnology and Bioengineering. 87: 823-34. PMID 15334409 DOI: 10.1002/bit.20192  0.56
2004 Aminov RI, Chee-Sanford JC, Garrigues N, Mehboob A, Mackie RI. Detection of tetracycline resistance genes by PCR methods. Methods in Molecular Biology (Clifton, N.J.). 268: 3-13. PMID 15156014 DOI: 10.1385/1-59259-766-1:003  0.44
2004 Mackie RI, Rycyk M, Ruemmler RL, Aminov RI, Wikelski M. Biochemical and microbiological evidence for fermentative digestion in free-living land iguanas (Conolophus pallidus) and marine iguanas (Amblyrhynchus cristatus) on the Galápagos archipelago. Physiological and Biochemical Zoology : Pbz. 77: 127-38. PMID 15057723 DOI: 10.1086/383498  0.56
2004 Smith AH, Mackie RI. Effect of condensed tannins on bacterial diversity and metabolic activity in the rat gastrointestinal tract. Applied and Environmental Microbiology. 70: 1104-15. PMID 14766594  0.96
2004 Zoetendal EG, Collier CT, Koike S, Mackie RI, Gaskins HR. Molecular ecological analysis of the gastrointestinal microbiota: a review. The Journal of Nutrition. 134: 465-72. PMID 14747690  0.56
2004 Robbins JB, Murphy MC, White BA, Mackie RI, Ha T, Cann IK. Functional analysis of multiple single-stranded DNA-binding proteins from Methanosarcina acetivorans and their effects on DNA synthesis by DNA polymerase BI. The Journal of Biological Chemistry. 279: 6315-26. PMID 14676214 DOI: 10.1074/jbc.M304491200  0.44
2003 Krause DO, Denman SE, Mackie RI, Morrison M, Rae AL, Attwood GT, McSweeney CS. Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics. Fems Microbiology Reviews. 27: 663-93. PMID 14638418 DOI: 10.1016/S0168-6445(03)00072-X  0.56
2003 Mackie RI, Aminov RI, Hu W, Klieve AV, Ouwerkerk D, Sundset MA, Kamagata Y. Ecology of uncultivated Oscillospira species in the rumen of cattle, sheep, and reindeer as assessed by microscopy and molecular approaches. Applied and Environmental Microbiology. 69: 6808-15. PMID 14602644  0.44
2003 Smith AH, Imlay JA, Mackie RI. Increasing the oxidative stress response allows Escherichia coli to overcome inhibitory effects of condensed tannins. Applied and Environmental Microbiology. 69: 3406-11. PMID 12788743  0.56
2003 Antonopoulos DA, Aminov RI, Duncan PA, White BA, Mackie RI. Characterization of the gene encoding glutamate dehydrogenase ( gdhA) from the ruminal bacterium Ruminococcus flavefaciens FD-1. Archives of Microbiology. 179: 184-90. PMID 12610723 DOI: 10.1007/s00203-002-0513-4  0.56
2002 Simpson JM, Kocherginskaya SA, Aminov RI, Skerlos LT, Bradley TM, Mackie RI, White BA. Comparative microbial diversity in the gastrointestinal tracts of food animal species. Integrative and Comparative Biology. 42: 327-31. PMID 21708725 DOI: 10.1093/icb/42.2.327  0.56
2002 Deplancke B, Vidal O, Ganessunker D, Donovan SM, Mackie RI, Gaskins HR. Selective growth of mucolytic bacteria including Clostridium perfringens in a neonatal piglet model of total parenteral nutrition. The American Journal of Clinical Nutrition. 76: 1117-25. PMID 12399288  0.56
2002 King MR, White BA, Blaschek HP, Chassy BM, Mackie RI, Cann IK. Purification and characterization of a thermostable alpha-galactosidase from Thermoanaerobacterium polysaccharolyticum. Journal of Agricultural and Food Chemistry. 50: 5676-82. PMID 12236697  0.44
2002 McCracken VJ, Chun T, Baldeón ME, Ahrné S, Molin G, Mackie RI, Gaskins HR. TNF-alpha sensitizes HT-29 colonic epithelial cells to intestinal lactobacilli. Experimental Biology and Medicine (Maywood, N.J.). 227: 665-70. PMID 12192111 DOI: 10.1177/153537020222700817  0.56
2002 Simpson JM, Martineau B, Jones WE, Ballam JM, Mackie RI. Characterization of fecal bacterial populations in canines: effects of age, breed and dietary fiber. Microbial Ecology. 44: 186-97. PMID 12087428 DOI: 10.1007/s00248-002-0001-z  0.56
2001 McCracken VJ, Simpson JM, Mackie RI, Gaskins HR. Molecular ecological analysis of dietary and antibiotic-induced alterations of the mouse intestinal microbiota. The Journal of Nutrition. 131: 1862-70. PMID 11385080  0.56
2001 Cann IKO, Stroot PG, Mackie KR, White BA, Mackie RI. Characterization of two novel saccharolytic, anaerobic thermophiles, Thermoanaerobacterium polysaccharolyticum sp. nov. and Thermoanaerobacterium zeae sp. nov., and emendation of the genus Thermoanaerobacterium International Journal of Systematic and Evolutionary Microbiology. 51: 293-302. PMID 11321073 DOI: 10.1099/00207713-51-2-293  0.56
2000 Hristova KR, Mau M, Zheng D, Aminov RI, Mackie RI, Gaskins HR, Raskin L. Desulfotomaculum genus- and subgenus-specific 16S rRNA hybridization probes for environmental studies. Environmental Microbiology. 2: 143-59. PMID 11220301 DOI: 10.1046/j.1462-2920.2000.00085.x  0.56
2000 Simpson JM, McCracken VJ, Gaskins HR, Mackie RI. Denaturing gradient gel electrophoresis analysis of 16S ribosomal DNA amplicons to monitor changes in fecal bacterial populations of weaning pigs after introduction of Lactobacillus reuteri strain MM53. Applied and Environmental Microbiology. 66: 4705-14. PMID 11055913 DOI: 10.1128/AEM.66.11.4705-4714.2000  0.56
2000 Deplancke B, Hristova KR, Oakley HA, McCracken VJ, Aminov R, Mackie RI, Gaskins HR. Molecular ecological analysis of the succession and diversity of sulfate-reducing bacteria in the mouse gastrointestinal tract. Applied and Environmental Microbiology. 66: 2166-74. PMID 10788396 DOI: 10.1128/AEM.66.5.2166-2174.2000  0.56
1999 Simpson JM, McCracken VJ, White BA, Gaskins HR, Mackie RI. Application of denaturant gradient gel electrophoresis for the analysis of the porcine gastrointestinal microbiota. Journal of Microbiological Methods. 36: 167-79. PMID 10379803 DOI: 10.1016/S0167-7012(99)00029-9  0.56
1998 Sghir A, Chow JM, Mackie RI. Continuous culture selection of bifidobacteria and lactobacilli from human faecal samples using fructooligosaccharide as selective substrate. Journal of Applied Microbiology. 85: 769-77. PMID 9812388 DOI: 10.1111/j.1365-2672.1998.00590.x  0.56
1992 Duncan PA, White BA, Mackie RI. Purification and properties of NADP-dependent glutamate dehydrogenase from Ruminococcus flavefaciens FD-1. Applied and Environmental Microbiology. 58: 4032-7. PMID 1335719 DOI: 10.1128/aem.58.12.4032-4037.1992  0.56
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