Patrick C. Cirino - Publications

Pennsylvania State University, State College, PA, United States 
Chemical Engineering, Microbiology Biology

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Qian S, Li Y, Cirino PC. Biosensor-guided improvements in salicylate production by recombinant Escherichia coli. Microbial Cell Factories. 18: 18. PMID 30696431 DOI: 10.1186/s12934-019-1069-1  0.36
2018 Li Y, Qian S, Dunn R, Cirino PC. Engineering Escherichia coli to increase triacetic acid lactone (TAL) production using an optimized TAL sensor-reporter system. Journal of Industrial Microbiology & Biotechnology. PMID 30046952 DOI: 10.1007/s10295-018-2062-0  0.36
2016 Wang Z, Cirino PC. New and improved tools and methods for enhanced biosynthesis of natural products in microorganisms. Current Opinion in Biotechnology. 42: 159-168. PMID 27284635 DOI: 10.1016/j.copbio.2016.05.003  1
2016 Sharma S, Jaimes-Lizcano YA, McLay RB, Cirino PC, Conrad JC. Sub-nanometric roughness affects deposition and mobile adhesion of Escherichia coli on silanized glass surfaces. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 27158837 DOI: 10.1021/acs.langmuir.6b00883  1
2016 Frei CS, Wang Z, Qian S, Deutsch S, Sutter M, Cirino PC. Analysis of Amino Acid Substitutions in AraC Variants that Respond to Triacetic Acid Lactone. Protein Science : a Publication of the Protein Society. PMID 26749125 DOI: 10.1002/pro.2873  1
2014 Ramesh B, Frei CS, Cirino PC, Varadarajan N. Functional enrichment by direct plasmid recovery after fluorescence activated cell sorting. Biotechniques. 59: 157-61. PMID 26345509 DOI: 10.2144/000114329  1
2014 Li Y, Cirino PC. Recent advances in engineering proteins for biocatalysis. Biotechnology and Bioengineering. 111: 1273-87. PMID 24802032 DOI: 10.1002/bit.25240  1
2013 Grisewood MJ, Gifford NP, Pantazes RJ, Li Y, Cirino PC, Janik MJ, Maranas CD. OptZyme: computational enzyme redesign using transition state analogues. Plos One. 8: e75358. PMID 24116038 DOI: 10.1371/journal.pone.0075358  1
2013 Tang SY, Qian S, Akinterinwa O, Frei CS, Gredell JA, Cirino PC. Screening for enhanced triacetic acid lactone production by recombinant Escherichia coli expressing a designed triacetic acid lactone reporter. Journal of the American Chemical Society. 135: 10099-103. PMID 23786422 DOI: 10.1021/ja402654z  1
2012 Ramesh B, Sendra VG, Cirino PC, Varadarajan N. Single-cell characterization of autotransporter-mediated Escherichia coli surface display of disulfide bond-containing proteins. The Journal of Biological Chemistry. 287: 38580-9. PMID 23019324 DOI: 10.1074/jbc.M112.388199  1
2012 Gredell JA, Frei CS, Cirino PC. Protein and RNA engineering to customize microbial molecular reporting. Biotechnology Journal. 7: 477-99. PMID 22031507 DOI: 10.1002/biot.201100266  1
2011 Chin JW, Cirino PC. Strain engineering strategies for improving whole-cell biocatalysis: engineering Escherichia coli to overproduce xylitol as an example. Methods in Molecular Biology (Clifton, N.J.). 743: 185-203. PMID 21553192 DOI: 10.1007/978-1-61779-132-1_15  1
2011 Chin JW, Cirino PC. Improved NADPH supply for xylitol production by engineered Escherichia coli with glycolytic mutations. Biotechnology Progress. 27: 333-41. PMID 21344680 DOI: 10.1002/btpr.559  1
2011 Tang SY, Cirino PC. Design and application of a mevalonate-responsive regulatory protein. Angewandte Chemie (International Ed. in English). 50: 1084-6. PMID 21268200 DOI: 10.1002/anie.201006083  1
2011 Fasan R, Crook NC, Peters MW, Meinhold P, Buelter T, Landwehr M, Cirino PC, Arnold FH. Improved product-per-glucose yields in P450-dependent propane biotransformations using engineered Escherichia coli. Biotechnology and Bioengineering. 108: 500-10. PMID 21246504 DOI: 10.1002/bit.22984  1
2011 Akinterinwa O, Cirino PC. Anaerobic obligatory xylitol production in Escherichia coli strains devoid of native fermentation pathways. Applied and Environmental Microbiology. 77: 706-9. PMID 21097593 DOI: 10.1128/AEM.01890-10  1
2010 Tang SY, Cirino PC. Elucidating residue roles in engineered variants of AraC regulatory protein. Protein Science : a Publication of the Protein Society. 19: 291-8. PMID 20014443 DOI: 10.1002/pro.310  1
2009 Khankal R, Chin JW, Ghosh D, Cirino PC. Transcriptional effects of CRP* expression in Escherichia coli. Journal of Biological Engineering. 3: 13. PMID 19703305 DOI: 10.1186/1754-1611-3-13  1
2009 Khoury GA, Fazelinia H, Chin JW, Pantazes RJ, Cirino PC, Maranas CD. Computational design of Candida boidinii xylose reductase for altered cofactor specificity. Protein Science : a Publication of the Protein Society. 18: 2125-38. PMID 19693930 DOI: 10.1002/pro.227  1
2009 Fazelinia H, Cirino PC, Maranas CD. OptGraft: A computational procedure for transferring a binding site onto an existing protein scaffold. Protein Science : a Publication of the Protein Society. 18: 180-95. PMID 19177362 DOI: 10.1002/pro.2  1
2009 Akinterinwa O, Cirino PC. Heterologous expression of D-xylulokinase from Pichia stipitis enables high levels of xylitol production by engineered Escherichia coli growing on xylose. Metabolic Engineering. 11: 48-55. PMID 18723107 DOI: 10.1016/j.ymben.2008.07.006  1
2009 Chin JW, Khankal R, Monroe CA, Maranas CD, Cirino PC. Analysis of NADPH supply during xylitol production by engineered Escherichia coli. Biotechnology and Bioengineering. 102: 209-20. PMID 18698648 DOI: 10.1002/bit.22060  1
2008 Akinterinwa O, Khankal R, Cirino PC. Metabolic engineering for bioproduction of sugar alcohols. Current Opinion in Biotechnology. 19: 461-7. PMID 18760354 DOI: 10.1016/j.copbio.2008.08.002  1
2008 Weiss LE, Badalamenti JP, Weaver LJ, Tascone AR, Weiss PS, Richard TL, Cirino PC. Engineering motility as a phenotypic response to LuxI/R-dependent quorum sensing in Escherichia coli. Biotechnology and Bioengineering. 100: 1251-5. PMID 18553406 DOI: 10.1002/bit.21862  1
2008 Khankal R, Luziatelli F, Chin JW, Frei CS, Cirino PC. Comparison between Escherichia coli K-12 strains W3110 and MG1655 and wild-type E. coli B as platforms for xylitol production. Biotechnology Letters. 30: 1645-53. PMID 18414795 DOI: 10.1007/s10529-008-9720-7  1
2008 Khankal R, Chin JW, Cirino PC. Role of xylose transporters in xylitol production from engineered Escherichia coli. Journal of Biotechnology. 134: 246-52. PMID 18359531 DOI: 10.1016/j.jbiotec.2008.02.003  1
2008 Tang SY, Fazelinia H, Cirino PC. AraC regulatory protein mutants with altered effector specificity. Journal of the American Chemical Society. 130: 5267-71. PMID 18355019 DOI: 10.1021/ja7109053  1
2008 Cirino PC, Sun L. Advancing biocatalysis through enzyme, cellular, and platform engineering. Biotechnology Progress. 24: 515-9. PMID 18335955 DOI: 10.1021/bp070387a  1
2007 Fazelinia H, Cirino PC, Maranas CD. Extending Iterative Protein Redesign and Optimization (IPRO) in protein library design for ligand specificity. Biophysical Journal. 92: 2120-30. PMID 17208966 DOI: 10.1529/biophysj.106.096016  1
2006 Cirino PC, Chin JW, Ingram LO. Engineering Escherichia coli for xylitol production from glucose-xylose mixtures. Biotechnology and Bioengineering. 95: 1167-76. PMID 16838379 DOI: 10.1002/bit.21082  1
2003 Salazar O, Cirino PC, Arnold FH. Thermostabilization of a cytochrome p450 peroxygenase. Chembiochem : a European Journal of Chemical Biology. 4: 891-3. PMID 12964165 DOI: 10.1002/cbic.200300660  1
2003 Cirino PC, Tang Y, Takahashi K, Tirrell DA, Arnold FH. Global incorporation of norleucine in place of methionine in cytochrome P450 BM-3 heme domain increases peroxygenase activity. Biotechnology and Bioengineering. 83: 729-34. PMID 12889037 DOI: 10.1002/bit.10718  1
2003 Cirino PC, Arnold FH. A self-sufficient peroxide-driven hydroxylation biocatalyst. Angewandte Chemie (International Ed. in English). 42: 3299-301. PMID 12876749 DOI: 10.1002/anie.200351434  1
2003 Cirino PC, Georgescu R. Screening for thermostability. Methods in Molecular Biology (Clifton, N.J.). 230: 117-25. PMID 12824574 DOI: 10.1385/1-59259-396-8:117  1
2002 Cirino PC, Arnold FH. Protein engineering of oxygenases for biocatalysis. Current Opinion in Chemical Biology. 6: 130-5. PMID 12038995 DOI: 10.1016/S1367-5931(02)00305-8  1
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