Stephen J. Giovannoni - Publications

Affiliations: 
Oregon State University, Corvallis, OR 
Area:
Cell Biology, Molecular Biology, Microbiology Biology

130 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Glass JB, Kretz CB, Ganesh S, Ranjan P, Seston SL, Buck KN, Landing WM, Morton PL, Moffett JW, Giovannoni SJ, Vergin KL, Stewart FJ. Corrigendum: Meta-omic signatures of microbial metal and nitrogen cycling in marine oxygen minimum zones. Frontiers in Microbiology. 11: 619943. PMID 33424821 DOI: 10.3389/fmicb.2020.619943  0.52
2020 Saw JHW, Nunoura T, Hirai M, Takaki Y, Parsons R, Michelsen M, Longnecker K, Kujawinski EB, Stepanauskas R, Landry Z, Carlson CA, Giovannoni SJ. Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria. Mbio. 11. PMID 31911493 DOI: 10.1128/Mbio.02975-19  0.4
2019 Giovannoni SJ, Halsey KH, Saw J, Muslin O, Suffridge CP, Sun J, Lee CP, Moore ER, Temperton B, Noell SE. A Parasitic Arsenic Cycle That Shuttles Energy from Phytoplankton to Heterotrophic Bacterioplankton. Mbio. 10. PMID 30890605 DOI: 10.1128/Mbio.00246-19  0.32
2018 Landry ZC, Vergin K, Mannenbach C, Block S, Yang Q, Blainey P, Carlson C, Giovannoni S. Optofluidic Single-Cell Genome Amplification of Sub-micron Bacteria in the Ocean Subsurface. Frontiers in Microbiology. 9: 1152. PMID 29937754 DOI: 10.3389/Fmicb.2018.01152  0.48
2016 Smith DP, Nicora CD, Carini P, Lipton MS, Norbeck AD, Smith RD, Giovannoni SJ. Proteome Remodeling in Response to Sulfur Limitation in "Candidatus Pelagibacter ubique". Msystems. 1. PMID 27822545 DOI: 10.1128/mSystems.00068-16  0.72
2016 Sun J, Todd JD, Thrash JC, Qian Y, Qian MC, Temperton B, Guo J, Fowler EK, Aldrich JT, Nicora CD, Lipton MS, Smith RD, De Leenheer P, Payne SH, Johnston AW, ... ... Giovannoni SJ, et al. Corrigendum: The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol. Nature Microbiology. 1: 16210. PMID 27694837 DOI: 10.1038/nmicrobiol.2016.210  0.44
2016 Sun J, Todd JD, Thrash JC, Qian Y, Qian MC, Temperton B, Guo J, Fowler EK, Aldrich JT, Nicora CD, Lipton MS, Smith RD, De Leenheer P, Payne SH, Johnston AW, ... ... Giovannoni SJ, et al. The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol. Nature Microbiology. 1: 16065. PMID 27573103 DOI: 10.1038/Nmicrobiol.2016.65  0.76
2015 Glass JB, Kretz CB, Ganesh S, Ranjan P, Seston SL, Buck KN, Landing WM, Morton PL, Moffett JW, Giovannoni SJ, Vergin KL, Stewart FJ. Meta-omic signatures of microbial metal and nitrogen cycling in marine oxygen minimum zones. Frontiers in Microbiology. 6: 998. PMID 26441925 DOI: 10.3389/Fmicb.2015.00998  0.76
2015 Carini P, Van Mooy BA, Thrash JC, White A, Zhao Y, Campbell EO, Fredricks HF, Giovannoni SJ. SAR11 lipid renovation in response to phosphate starvation. Proceedings of the National Academy of Sciences of the United States of America. 112: 7767-72. PMID 26056292 DOI: 10.1073/Pnas.1505034112  0.76
2015 Worden AZ, Follows MJ, Giovannoni SJ, Wilken S, Zimmerman AE, Keeling PJ. Environmental science. Rethinking the marine carbon cycle: factoring in the multifarious lifestyles of microbes. Science (New York, N.Y.). 347: 1257594. PMID 25678667 DOI: 10.1126/Science.1257594  0.76
2014 Biller SJ, Berube PM, Berta-Thompson JW, Kelly L, Roggensack SE, Awad L, Roache-Johnson KH, Ding H, Giovannoni SJ, Rocap G, Moore LR, Chisholm SW. Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus. Scientific Data. 1: 140034. PMID 25977791 DOI: 10.1038/Sdata.2014.34  0.76
2014 Carini P, White AE, Campbell EO, Giovannoni SJ. Methane production by phosphate-starved SAR11 chemoheterotrophic marine bacteria. Nature Communications. 5: 4346. PMID 25000228 DOI: 10.1038/Ncomms5346  0.76
2014 Carini P, Campbell EO, Morré J, Sañudo-Wilhelmy SA, Thrash JC, Bennett SE, Temperton B, Begley T, Giovannoni SJ. Discovery of a SAR11 growth requirement for thiamin's pyrimidine precursor and its distribution in the Sargasso Sea. The Isme Journal. 8: 1727-38. PMID 24781899 DOI: 10.1038/Ismej.2014.61  0.76
2014 Giovannoni SJ, Cameron Thrash J, Temperton B. Implications of streamlining theory for microbial ecology. The Isme Journal. 8: 1553-65. PMID 24739623 DOI: 10.1038/Ismej.2014.60  0.32
2014 Parsons RJ, Nelson CE, Carlson CA, Denman CC, Andersson AJ, Kledzik AL, Vergin KL, McNally SP, Treusch AH, Giovannoni SJ. Marine bacterioplankton community turnover within seasonally hypoxic waters of a subtropical sound: Devil's Hole, Bermuda. Environmental Microbiology. PMID 24589037 DOI: 10.1111/1462-2920.12445  0.76
2014 Thrash JC, Temperton B, Swan BK, Landry ZC, Woyke T, DeLong EF, Stepanauskas R, Giovannoni SJ. Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype. The Isme Journal. 8: 1440-51. PMID 24451205 DOI: 10.1038/Ismej.2013.243  0.76
2013 Ferla MP, Thrash JC, Giovannoni SJ, Patrick WM. New rRNA gene-based phylogenies of the Alphaproteobacteria provide perspective on major groups, mitochondrial ancestry and phylogenetic instability. Plos One. 8: e83383. PMID 24349502 DOI: 10.1371/Journal.Pone.0083383  0.4
2013 Smith DP, Thrash JC, Nicora CD, Lipton MS, Burnum-Johnson KE, Carini P, Smith RD, Giovannoni SJ. Proteomic and transcriptomic analyses of "Candidatus Pelagibacter ubique" describe the first PII-independent response to nitrogen limitation in a free-living Alphaproteobacterium. Mbio. 4: e00133-12. PMID 24281717 DOI: 10.1128/Mbio.00133-12  0.76
2013 Swan BK, Tupper B, Sczyrba A, Lauro FM, Martinez-Garcia M, González JM, Luo H, Wright JJ, Landry ZC, Hanson NW, Thompson BP, Poulton NJ, Schwientek P, Acinas SG, Giovannoni SJ, et al. Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean. Proceedings of the National Academy of Sciences of the United States of America. 110: 11463-8. PMID 23801761 DOI: 10.1073/Pnas.1304246110  0.76
2013 Vergin KL, Beszteri B, Monier A, Thrash JC, Temperton B, Treusch AH, Kilpert F, Worden AZ, Giovannoni SJ. High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences. The Isme Journal. 7: 1322-32. PMID 23466704 DOI: 10.1038/Ismej.2013.32  0.76
2013 Zhao Y, Temperton B, Thrash JC, Schwalbach MS, Vergin KL, Landry ZC, Ellisman M, Deerinck T, Sullivan MB, Giovannoni SJ. Abundant SAR11 viruses in the ocean Nature. 494: 357-360. PMID 23407494 DOI: 10.1038/Nature11921  0.76
2013 Carini P, Steindler L, Beszteri S, Giovannoni SJ. Nutrient requirements for growth of the extreme oligotroph 'Candidatus Pelagibacter ubique' HTCC1062 on a defined medium. The Isme Journal. 7: 592-602. PMID 23096402 DOI: 10.1038/Ismej.2012.122  0.76
2013 Vergin KL, Done B, Carlson CA, Giovannoni SJ. Spatiotemporal distributions of rare bacterioplankton populations indicate adaptive strategies in the oligotrophic ocean Aquatic Microbial Ecology. 71: 1-13. DOI: 10.3354/Ame01661  0.76
2012 Grote J, Thrash JC, Huggett MJ, Landry ZC, Carini P, Giovannoni SJ, Rappé MS. Streamlining and core genome conservation among highly divergent members of the SAR11 clade. Mbio. 3. PMID 22991429 DOI: 10.1128/Mbio.00252-12  0.76
2012 Temperton B, Giovannoni SJ. Metagenomics: microbial diversity through a scratched lens. Current Opinion in Microbiology. 15: 605-12. PMID 22831844 DOI: 10.1016/J.Mib.2012.07.001  0.32
2012 Giovannoni SJ, Vergin KL. Seasonality in ocean microbial communities. Science (New York, N.Y.). 335: 671-6. PMID 22323811 DOI: 10.1126/Science.1198078  0.52
2012 Halsey KH, Carter AE, Giovannoni SJ. Synergistic metabolism of a broad range of C1 compounds in the marine methylotrophic bacterium HTCC2181. Environmental Microbiology. 14: 630-40. PMID 21981742 DOI: 10.1111/J.1462-2920.2011.02605.X  0.76
2012 Treusch AH, Demir-Hilton E, Vergin KL, Worden AZ, Carlson CA, Donatz MG, Burton RM, Giovannoni SJ. Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids. The Isme Journal. 6: 481-92. PMID 21955994 DOI: 10.1038/Ismej.2011.117  0.76
2011 Thrash JC, Boyd A, Huggett MJ, Grote J, Carini P, Yoder RJ, Robbertse B, Spatafora JW, Rappé MS, Giovannoni SJ. Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade. Scientific Reports. 1: 13. PMID 22355532 DOI: 10.1038/Srep00013  0.76
2011 Sun J, Steindler L, Thrash JC, Halsey KH, Smith DP, Carter AE, Landry ZC, Giovannoni SJ. One carbon metabolism in SAR11 pelagic marine bacteria. Plos One. 6: e23973. PMID 21886845 DOI: 10.1371/Journal.Pone.0023973  0.76
2011 Steindler L, Schwalbach MS, Smith DP, Chan F, Giovannoni SJ. Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration. Plos One. 6: e19725. PMID 21573025 DOI: 10.1371/Journal.Pone.0019725  0.76
2011 Wang L, Chen S, Vergin KL, Giovannoni SJ, Chan SW, DeMott MS, Taghizadeh K, Cordero OX, Cutler M, Timberlake S, Alm EJ, Polz MF, Pinhassi J, Deng Z, Dedon PC. DNA phosphorothioation is widespread and quantized in bacterial genomes. Proceedings of the National Academy of Sciences of the United States of America. 108: 2963-8. PMID 21285367 DOI: 10.1073/Pnas.1017261108  0.76
2011 Thrash JC, Cho JC, Bertagnolli AD, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ. Genome sequence of the Marine Janibacter Sp. Strain HTCC2649. Journal of Bacteriology. 193: 584-5. PMID 21075932 DOI: 10.1128/Jb.01298-10  0.76
2011 Sowell SM, Abraham PE, Shah M, Verberkmoes NC, Smith DP, Barofsky DF, Giovannoni SJ. Environmental proteomics of microbial plankton in a highly productive coastal upwelling system. The Isme Journal. 5: 856-65. PMID 21068774 DOI: 10.1038/Ismej.2010.168  0.76
2011 Oh HM, Kang I, Yang SJ, Jang Y, Vergin KL, Giovannoni SJ, Cho JC. Complete genome sequence of strain HTCC2170, a novel member of the genus Maribacter in the family Flavobacteriaceae. Journal of Bacteriology. 193: 303-4. PMID 21037013 DOI: 10.1128/Jb.01207-10  0.76
2011 Oh HM, Kang I, Vergin KL, Kang D, Rhee KH, Giovannoni SJ, Cho JC. Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis, the type species of the order "Parvularculales" in the class Alphaproteobacteria. Journal of Bacteriology. 193: 305-6. PMID 21037002 DOI: 10.1128/Jb.01205-10  0.52
2011 Kang I, Vergin KL, Oh HM, Choi A, Giovannoni SJ, Cho JC. Genome sequence of strain HTCC2083, a novel member of the marine clade Roseobacter. Journal of Bacteriology. 193: 319-20. PMID 21036993 DOI: 10.1128/Jb.01268-10  0.76
2011 Oh HM, Kang I, Vergin KL, Lee K, Giovannoni SJ, Cho JC. Genome sequence of Oceanicaulis sp. strain HTCC2633, isolated from the Western Sargasso Sea. Journal of Bacteriology. 193: 317-8. PMID 21036991 DOI: 10.1128/Jb.01267-10  0.76
2011 Bertagnolli A, Treusch A, Mason O, Stingl U, Vergin K, Chan F, Beszteri B, Giovannoni S. Bacterial diversity in the bottom boundary layer of the inner continental shelf of Oregon, USA Aquatic Microbial Ecology. 64: 15-25. DOI: 10.3354/Ame01504  0.96
2010 Mason OU, Nakagawa T, Rosner M, Van Nostrand JD, Zhou J, Maruyama A, Fisk MR, Giovannoni SJ. First investigation of the microbiology of the deepest layer of ocean crust. Plos One. 5: e15399. PMID 21079766 DOI: 10.1371/Journal.Pone.0015399  0.76
2010 Kang I, Oh HM, Vergin KL, Giovannoni SJ, Cho JC. Genome sequence of the marine alphaproteobacterium HTCC2150, assigned to the Roseobacter clade. Journal of Bacteriology. 192: 6315-6. PMID 20889754 DOI: 10.1128/Jb.01088-10  0.76
2010 Thrash JC, Cho JC, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ. Genome sequences of Pelagibaca bermudensis HTCC2601T and Maritimibacter alkaliphilus HTCC2654T, the type strains of two marine Roseobacter genera. Journal of Bacteriology. 192: 5552-3. PMID 20729358 DOI: 10.1128/Jb.00873-10  0.76
2010 Oh HM, Kang I, Ferriera S, Giovannoni SJ, Cho JC. Complete genome sequence of Croceibacter atlanticus HTCC2559T. Journal of Bacteriology. 192: 4796-7. PMID 20639333 DOI: 10.1128/Jb.00733-10  0.76
2010 Kang I, Oh HM, Lim SI, Ferriera S, Giovannoni SJ, Cho JC. Genome sequence of Fulvimarina pelagi HTCC2506T, a Mn(II)-oxidizing alphaproteobacterium possessing an aerobic anoxygenic photosynthetic gene cluster and Xanthorhodopsin. Journal of Bacteriology. 192: 4798-9. PMID 20639329 DOI: 10.1128/Jb.00761-10  0.76
2010 Oh HM, Kang I, Ferriera S, Giovannoni SJ, Cho JC. Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon Coast. Journal of Bacteriology. 192: 4530-1. PMID 20601481 DOI: 10.1128/Jb.00683-10  0.76
2010 Thrash JC, Cho JC, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ. Genome sequences of strains HTCC2148 and HTCC2080, belonging to the OM60/NOR5 clade of the Gammaproteobacteria. Journal of Bacteriology. 192: 3842-3. PMID 20472793 DOI: 10.1128/Jb.00511-10  0.76
2010 Thrash JC, Stingl U, Cho JC, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ. Genome sequence of the novel marine member of the Gammaproteobacteria strain HTCC5015. Journal of Bacteriology. 192: 3838-9. PMID 20472792 DOI: 10.1128/Jb.00510-10  0.76
2010 Smith DP, Kitner JB, Norbeck AD, Clauss TR, Lipton MS, Schwalbach MS, Steindler L, Nicora CD, Smith RD, Giovannoni SJ. Transcriptional and translational regulatory responses to iron limitation in the globally distributed marine bacterium Candidatus pelagibacter ubique. Plos One. 5: e10487. PMID 20463970 DOI: 10.1371/Journal.Pone.0010487  0.76
2010 Thrash JC, Cho JC, Vergin KL, Giovannoni SJ. Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola batsensis HTCC2597(TDelta). Journal of Bacteriology. 192: 3549-50. PMID 20418400 DOI: 10.1128/Jb.00412-10  0.76
2010 Thrash JC, Cho JC, Vergin KL, Morris RM, Giovannoni SJ. Genome sequence of Lentisphaera araneosa HTCC2155T, the type species of the order Lentisphaerales in the phylum Lentisphaerae. Journal of Bacteriology. 192: 2938-9. PMID 20363947 DOI: 10.1128/Jb.00208-10  0.76
2010 Beszteri B, Temperton B, Frickenhaus S, Giovannoni SJ. Average genome size: a potential source of bias in comparative metagenomics. The Isme Journal. 4: 1075-7. PMID 20336158 DOI: 10.1038/Ismej.2010.29  0.32
2010 Schwalbach MS, Tripp HJ, Steindler L, Smith DP, Giovannoni SJ. The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity. Environmental Microbiology. 12: 490-500. PMID 19889000 DOI: 10.1111/J.1462-2920.2009.02092.X  0.76
2009 Oh HM, Giovannoni SJ, Lee K, Ferriera S, Johnson J, Cho JC. Complete genome sequence of Robiginitalea biformata HTCC2501. Journal of Bacteriology. 191: 7144-5. PMID 19767438 DOI: 10.1128/Jb.01191-09  0.76
2009 Meyer MM, Ames TD, Smith DP, Weinberg Z, Schwalbach MS, Giovannoni SJ, Breaker RR. Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'. Bmc Genomics. 10: 268. PMID 19531245 DOI: 10.1186/1471-2164-10-268  0.76
2009 Treusch AH, Vergin KL, Finlay LA, Donatz MG, Burton RM, Carlson CA, Giovannoni SJ. Seasonality and vertical structure of microbial communities in an ocean gyre. The Isme Journal. 3: 1148-63. PMID 19494846 DOI: 10.1038/Ismej.2009.60  0.76
2009 Oh HM, Giovannoni SJ, Ferriera S, Johnson J, Cho JC. Complete genome sequence of Erythrobacter litoralis HTCC2594. Journal of Bacteriology. 191: 2419-20. PMID 19168610 DOI: 10.1128/Jb.00026-09  0.76
2009 Tripp HJ, Schwalbach MS, Meyer MM, Kitner JB, Breaker RR, Giovannoni SJ. Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11. Environmental Microbiology. 11: 230-8. PMID 19125817 DOI: 10.1111/J.1462-2920.2008.01758.X  0.76
2009 Carlson CA, Morris R, Parsons R, Treusch AH, Giovannoni SJ, Vergin K. Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea. The Isme Journal. 3: 283-95. PMID 19052630 DOI: 10.1038/Ismej.2008.117  0.76
2009 Mason OU, Di Meo-Savoie CA, Van Nostrand JD, Zhou J, Fisk MR, Giovannoni SJ. Prokaryotic diversity, distribution, and insights into their role in biogeochemical cycling in marine basalts. The Isme Journal. 3: 231-42. PMID 18843298 DOI: 10.1038/Ismej.2008.92  0.76
2009 Kujawinski EB, Longnecker K, Blough NV, Vecchio RD, Finlay L, Kitner JB, Giovannoni SJ. Identification of possible source markers in marine dissolved organic matter using ultrahigh resolution mass spectrometry Geochimica Et Cosmochimica Acta. 73: 4384-4399. DOI: 10.1016/J.Gca.2009.04.033  0.76
2008 Sowell SM, Norbeck AD, Lipton MS, Nicora CD, Callister SJ, Smith RD, Barofsky DF, Giovannoni SJ. Proteomic analysis of stationary phase in the marine bacterium "Candidatus Pelagibacter ubique". Applied and Environmental Microbiology. 74: 4091-100. PMID 18469119 DOI: 10.1128/Aem.00599-08  0.76
2008 Giovannoni SJ, Hayakawa DH, Tripp HJ, Stingl U, Givan SA, Cho JC, Oh HM, Kitner JB, Vergin KL, Rappé MS. The small genome of an abundant coastal ocean methylotroph. Environmental Microbiology. 10: 1771-82. PMID 18393994 DOI: 10.1111/J.1462-2920.2008.01598.X  0.96
2008 Tripp HJ, Kitner JB, Schwalbach MS, Dacey JW, Wilhelm LJ, Giovannoni SJ. SAR11 marine bacteria require exogenous reduced sulphur for growth. Nature. 452: 741-4. PMID 18337719 DOI: 10.1038/Nature06776  0.76
2008 Stingl U, Cho JC, Foo W, Vergin KL, Lanoil B, Giovannoni SJ. Dilution-to-extinction culturing of psychrotolerant planktonic bacteria from permanently ice-covered lakes in the McMurdo Dry Valleys, Antarctica Microbial Ecology. 55: 395-405. PMID 17623231 DOI: 10.1007/S00248-007-9284-4  0.76
2007 Stingl U, Tripp HJ, Giovannoni SJ. Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site. The Isme Journal. 1: 361-71. PMID 18043647 DOI: 10.1038/Ismej.2007.49  0.96
2007 Wilhelm LJ, Tripp HJ, Givan SA, Smith DP, Giovannoni SJ. Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data. Biology Direct. 2: 27. PMID 17988398 DOI: 10.1186/1745-6150-2-27  0.76
2007 Desiderio RA, Laney SR, Letelier RM, Giovannoni SJ. Using lasers to probe the transient light absorption by proteorhodopsin in marine bacterioplankton. Applied Optics. 46: 7329-36. PMID 17932547 DOI: 10.1364/Ao.46.007329  0.76
2007 Giovannoni S, Stingl U. The importance of culturing bacterioplankton in the 'omics' age. Nature Reviews. Microbiology. 5: 820-6. PMID 17853909 DOI: 10.1038/Nrmicro1752  0.96
2007 Mason OU, Stingl U, Wilhelm LJ, Moeseneder MM, Di Meo-Savoie CA, Fisk MR, Giovannoni SJ. The phylogeny of endolithic microbes associated with marine basalts. Environmental Microbiology. 9: 2539-50. PMID 17803778 DOI: 10.1111/J.1462-2920.2007.01372.X  0.96
2007 Vergin KL, Tripp HJ, Wilhelm LJ, Denver DR, Rappé MS, Giovannoni SJ. High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11). Environmental Microbiology. 9: 2430-40. PMID 17803769 DOI: 10.1111/J.1462-2920.2007.01361.X  0.76
2007 Lee K, Choo YJ, Giovannoni SJ, Cho JC. Ruegeria pelagia sp. nov., isolated from the Sargasso Sea, Atlantic Ocean. International Journal of Systematic and Evolutionary Microbiology. 57: 1815-8. PMID 17684263 DOI: 10.1099/Ijs.0.65032-0  0.76
2007 Lee K, Choo YJ, Giovannoni SJ, Cho JC. Maritimibacter alkaliphilus gen. nov., sp. nov., a genome-sequenced marine bacterium of the Roseobacter clade in the order Rhodobacterales. International Journal of Systematic and Evolutionary Microbiology. 57: 1653-8. PMID 17625211 DOI: 10.1099/Ijs.0.64960-0  0.76
2007 Cho JC, Stapels MD, Morris RM, Vergin KL, Schwalbach MS, Givan SA, Barofsky DF, Giovannoni SJ. Polyphyletic photosynthetic reaction centre genes in oligotrophic marine Gammaproteobacteria. Environmental Microbiology. 9: 1456-63. PMID 17504483 DOI: 10.1111/J.1462-2920.2007.01264.X  0.76
2007 Stingl U, Desiderio RA, Cho JC, Vergin KL, Giovannoni SJ. The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin. Applied and Environmental Microbiology. 73: 2290-6. PMID 17293499 DOI: 10.1128/Aem.02559-06  0.76
2007 Choi DH, Cho JC, Lanoil BD, Giovannoni SJ, Cho BC. Maribius salinus gen. nov., sp. nov., isolated from a solar saltern and Maribius pelagius sp. nov., cultured from the Sargasso Sea, belonging to the Roseobacter clade. International Journal of Systematic and Evolutionary Microbiology. 57: 270-5. PMID 17267963 DOI: 10.1099/Ijs.0.64552-0  0.76
2006 Morris RM, Longnecker K, Giovannoni SJ. Pirellula and OM43 are among the dominant lineages identified in an Oregon coast diatom bloom. Environmental Microbiology. 8: 1361-70. PMID 16872400 DOI: 10.1111/J.1462-2920.2006.01029.X  0.76
2006 Cho JC, Giovannoni SJ. Pelagibaca bermudensis gen. nov., sp. nov., a novel marine bacterium within the Roseobacter clade in the order Rhodobacterales. International Journal of Systematic and Evolutionary Microbiology. 56: 855-9. PMID 16585706 DOI: 10.1099/Ijs.0.64063-0  0.76
2006 Nicastro D, Schwartz C, Pierson J, Cho JC, Giovannoni SJ, McIntosh JR. Three-dimensional structure of the tiny bacterium Pelagibacter ubique studied by cryo-electron tomography Microscopy and Microanalysis. 12: 180-181. DOI: 10.1017/S1431927606067456  0.76
2005 Giovannoni SJ, Bibbs L, Cho JC, Stapels MD, Desiderio R, Vergin KL, Rappé MS, Laney S, Wilhelm LJ, Tripp HJ, Mathur EJ, Barofsky DF. Proteorhodopsin in the ubiquitous marine bacterium SAR11. Nature. 438: 82-5. PMID 16267553 DOI: 10.1038/Nature04032  0.76
2005 Giovannoni SJ, Stingl U. Molecular diversity and ecology of microbial plankton. Nature. 437: 343-8. PMID 16163344 DOI: 10.1038/Nature04158  0.96
2005 Giovannoni SJ, Tripp HJ, Givan S, Podar M, Vergin KL, Baptista D, Bibbs L, Eads J, Richardson TH, Noordewier M, Rappé MS, Short JM, Carrington JC, Mathur EJ. Genome streamlining in a cosmopolitan oceanic bacterium. Science (New York, N.Y.). 309: 1242-5. PMID 16109880 DOI: 10.1126/Science.1114057  0.76
2005 Connon SA, Tovanabootr A, Dolan M, Vergin K, Giovannoni SJ, Semprini L. Bacterial community composition determined by culture-independent and -dependent methods during propane-stimulated bioremediation in trichloroethene-contaminated groundwater. Environmental Microbiology. 7: 165-78. PMID 15658984 DOI: 10.1111/J.1462-2920.2004.00680.X  0.76
2004 Page KA, Connon SA, Giovannoni SJ. Representative freshwater bacterioplankton isolated from Crater Lake, Oregon. Applied and Environmental Microbiology. 70: 6542-50. PMID 15528517 DOI: 10.1128/Aem.70.11.6542-6550.2004  0.76
2004 Stapels MD, Cho JC, Giovannoni SJ, Barofsky DF. Proteomic analysis of novel marine bacteria using MALDI and ESI mass spectrometry. Journal of Biomolecular Techniques : Jbt. 15: 191-8. PMID 15331585  0.76
2004 Cho JC, Giovannoni SJ. Oceanicola granulosus gen. nov., sp. nov. and Oceanicola batsensis sp. nov., poly-beta-hydroxybutyrate-producing marine bacteria in the order 'Rhodobacterales'. International Journal of Systematic and Evolutionary Microbiology. 54: 1129-36. PMID 15280281 DOI: 10.1099/Ijs.0.03015-0  0.76
2004 Cho JC, Giovannoni SJ. Robiginitalea biformata gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae with a higher G+C content. International Journal of Systematic and Evolutionary Microbiology. 54: 1101-6. PMID 15280276 DOI: 10.1099/Ijs.0.03023-0  0.76
2004 Cho JC, Vergin KL, Morris RM, Giovannoni SJ. Lentisphaera araneosa gen. nov., sp. nov, a transparent exopolymer producing marine bacterium, and the description of a novel bacterial phylum, Lentisphaerae. Environmental Microbiology. 6: 611-21. PMID 15142250 DOI: 10.1111/J.1462-2920.2004.00614.X  0.76
2004 Morris RM, Rappé MS, Urbach E, Connon SA, Giovannoni SJ. Prevalence of the Chloroflexi-related SAR202 bacterioplankton cluster throughout the mesopelagic zone and deep ocean. Applied and Environmental Microbiology. 70: 2836-42. PMID 15128540 DOI: 10.1128/Aem.70.5.2836-2842.2004  1
2004 Cho JC, Giovannoni SJ. Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria. Applied and Environmental Microbiology. 70: 432-40. PMID 14711672 DOI: 10.1128/Aem.70.1.432-440.2004  0.76
2004 Carlson CA, Giovannoni SJ, Hansell DA, Goldberg SJ, Parsons R, Vergin K. Interactions among dissolved organic carbon, microbial processes, and community structure in the mesopelagic zone of the northwestern Sargasso Sea Limnology and Oceanography. 49: 1073-1083. DOI: 10.4319/Lo.2004.49.4.1073  0.76
2003 Cho JC, Giovannoni SJ. Fulvimarina pelagi gen. nov., sp. nov., a marine bacterium that forms a deep evolutionary lineage of descent in the order "Rhizobiales". International Journal of Systematic and Evolutionary Microbiology. 53: 1853-9. PMID 14657114 DOI: 10.1099/Ijs.0.02644-0  0.76
2003 Rappé MS, Giovannoni SJ. The uncultured microbial majority. Annual Review of Microbiology. 57: 369-94. PMID 14527284 DOI: 10.1146/Annurev.Micro.57.030502.090759  0.48
2003 Cho JC, Giovannoni SJ. Parvularcula bermudensis gen. nov., sp. nov., a marine bacterium that forms a deep branch in the alpha-Proteobacteria. International Journal of Systematic and Evolutionary Microbiology. 53: 1031-6. PMID 12892122 DOI: 10.1099/Ijs.0.02566-0  0.76
2003 Cho JC, Giovannoni SJ. Croceibacter atlanticus gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae. Systematic and Applied Microbiology. 26: 76-83. PMID 12747413 DOI: 10.1078/072320203322337344  0.76
2003 Cowen JP, Giovannoni SJ, Kenig F, Johnson HP, Butterfield D, Rappé MS, Hutnak M, Lam P. Fluids from aging ocean crust that support microbial life. Science (New York, N.Y.). 299: 120-3. PMID 12511653 DOI: 10.1126/Science.1075653  0.76
2002 Morris RM, Rappé MS, Connon SA, Vergin KL, Siebold WA, Carlson CA, Giovannoni SJ. SAR11 clade dominates ocean surface bacterioplankton communities. Nature. 420: 806-10. PMID 12490947 DOI: 10.1038/Nature01240  0.76
2002 Rappé MS, Connon SA, Vergin KL, Giovannoni SJ. Cultivation of the ubiquitous SAR11 marine bacterioplankton clade. Nature. 418: 630-3. PMID 12167859 DOI: 10.1038/Nature00917  1
2002 Connon SA, Giovannoni SJ. High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates. Applied and Environmental Microbiology. 68: 3878-85. PMID 12147485 DOI: 10.1128/Aem.68.8.3878-3885.2002  1
2002 Carlson CA, Giovannoni SJ, Hansell DA, Goldberg SJ, Parsons R, Otero MP, Vergin K, Wheeler BR. Effect of nutrient amendments on bacterioplankton production, community structure, and DOC utilization in the northwestern Sargasso Sea Aquatic Microbial Ecology. 30: 19-36. DOI: 10.3354/Ame030019  0.76
2000 Lanoil BD, Carlson CA, Giovannoni SJ. Bacterial chromosomal painting for in situ monitoring of cultured marine bacteria. Environmental Microbiology. 2: 654-65. PMID 11214798 DOI: 10.1046/J.1462-2920.2000.00148.X  0.76
2000 Rappé MS, Vergin K, Giovannoni SJ. Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems. Fems Microbiology Ecology. 33: 219-232. PMID 11098073 DOI: 10.1111/J.1574-6941.2000.Tb00744.X  0.48
1999 McAshan SK, Vergin KL, Giovannoni SJ, Thaler DS. Interspecies recombination between enterococci: Genetic and phenotypic diversity of vancomycin-resistant transconjugants Microbial Drug Resistance. 5: 101-112. PMID 10432271 DOI: 10.1089/mdr.1999.5.101  0.76
1999 Janson S, Bergman B, Carpenter EJ, Giovannoni SJ, Vergin K. Genetic analysis of natural populations of the marine diazotrophic cyanobacterium Trichodesmium Fems Microbiology Ecology. 30: 57-65. DOI: 10.1111/J.1574-6941.1999.Tb00635.X  0.76
1999 Tenover FC, Giovannoni SJ. Techniques microbial diversity, organism identification, and strain typing: 'The needs of the many versus the needs of the one': Editorial overview Current Opinion in Microbiology. 2: 297-298. DOI: 10.1016/S1369-5274(99)80051-4  0.76
1999 Boyd PW, Sherry ND, Berges JA, Bishop JKB, Calvert SE, Charette MA, Giovannoni SJ, Goldblatt R, Harrison PJ, Moran SB, Roy S, Soon M, Strom S, Thibault D, Vergin KL, et al. Transformations of biogenic particulates from the pelagic to the deep ocean realm Deep-Sea Research Part Ii: Topical Studies in Oceanography. 46: 2761-2792. DOI: 10.1016/S0967-0645(99)00083-1  0.76
1998 Vergin KL, Urbach E, Stein JL, DeLong EF, Lanoil BD, Giovannoni SJ. Screening of a fosmid library of marine environmental genomic DNA fragments reveals four clones related to members of the order Planctomycetales Applied and Environmental Microbiology. 64: 3075-3078. PMID 9687477 DOI: 10.1128/Aem.64.8.3075-3078.1998  0.76
1998 Priscu JC, Fritsen CH, Adams EE, Giovannoni SJ, Paerl HW, McKay CP, Doran PT, Gordon DA, Lanoil BD, Pinckney JL. Perennial antarctic lake ice: An oasis for life in a polar desert Science. 280: 2095-2098. PMID 9641910 DOI: 10.1126/Science.280.5372.2095  0.76
1997 Wright TD, Vergin KL, Boyd PW, Giovannoni SJ. A novel delta-subdivision proteobacterial lineage from the lower ocean surface layer. Applied and Environmental Microbiology. 63: 1441-8. PMID 9097442 DOI: 10.1128/Aem.63.4.1441-1448.1997  0.76
1997 Urbach E, Daniels B, Salama MS, Sandine WE, Giovannoni SJ. The ldh phylogeny for environmental isolates of Lactococcus lactis is consistent with rRNA genotypes but not with phenotypes. Applied and Environmental Microbiology. 63: 694-702. PMID 9023947 DOI: 10.1128/Aem.63.2.694-702.1997  0.76
1997 Field KG, Gordon D, Wright T, Rappé M, Urbach E, Vergin K, Giovannoni SJ. Diversity and depth-specific distribution of SAR11 cluster rRNA genes from marine planktonic bacteria Applied and Environmental Microbiology. 63: 63-70. PMID 8979340 DOI: 10.1128/Aem.63.1.63-70.1997  0.76
1996 Lanoil BD, Ciuffetti LM, Giovannoni SJ. The marine bacterium pseudoalteromonas haloplanktis has a complex genome structure composed of two separate genetic units Genome Research. 6: 1160-1169. PMID 8973910 DOI: 10.1101/Gr.6.12.1160  0.76
1995 Salama MS, Sandine WE, Giovannoni SJ. A milk-based method for detecting antimicrobial substances produced by lactic acid bacteria. Journal of Dairy Science. 78: 1219-23. PMID 7673514 DOI: 10.3168/Jds.S0022-0302(95)76741-8  0.76
1993 Salama MS, Sandine WE, Giovannoni SJ. Isolation of Lactococcus lactis subsp. cremoris from nature by colony hybridization with rRNA probes. Applied and Environmental Microbiology. 59: 3941-5. PMID 7506898 DOI: 10.1128/Aem.59.11.3941-3945.1993  0.76
1992 Lane DJ, Harrison AP, Stahl D, Pace B, Giovannoni SJ, Olsen GJ, Pace NR. Evolutionary relationships among sulfur- and iron-oxidizing eubacteria. Journal of Bacteriology. 174: 269-78. PMID 1729214 DOI: 10.1128/Jb.174.1.269-278.1992  0.76
1991 Field KG, Landfear SM, Giovannoni SJ. 18S rRNA sequences of Leishmania enriettii promastigote and amastigote International Journal For Parasitology. 21: 483-485. PMID 1917290 DOI: 10.1016/0020-7519(91)90109-K  0.76
1991 Gutenberger SK, Giovannoni SJ, Field KG, Fryer JL, Rohovec JS. A phylogenetic comparison of the 16S rRNA sequence of the fish pathogen, Renibacterium salmoninarum, to Gram-positive bacteria Fems Microbiology Letters. 77: 151-156. PMID 1709893 DOI: 10.1111/J.1574-6968.1991.Tb04339.X  0.76
1990 Giovannoni SJ, DeLong EF, Schmidt TM, Pace NR. Tangential flow filtration and preliminary phylogenetic analysis of marine picoplankton. Applied and Environmental Microbiology. 56: 2572-5. PMID 2403262 DOI: 10.1128/Aem.56.8.2572-2575.1990  0.76
1990 Giovannoni SJ, Britschgi TB, Moyer CL, Field KG. Genetic diversity in Sargasso Sea bacterioplankton Nature. 345: 60-63. PMID 2330053 DOI: 10.1038/345060A0  0.76
1989 Turner S, Burger-Wiersma T, Giovannoni SJ, Mur LR, Pace NR. The relationship of a prochlorophyte Prochlorothrix hollandicato green chloroplasts Nature. 337: 380-382. PMID 2911389 DOI: 10.1038/337380A0  0.76
1988 Distel DL, Lane DJ, Olsen GJ, Giovannoni SJ, Pace B, Pace NR, Stahl DA, Felbeck H. Sulfur-oxidizing bacterial endosymbionts: analysis of phylogeny and specificity by 16S rRNA sequences Journal of Bacteriology. 170: 2506-2510. PMID 3286609 DOI: 10.1128/Jb.170.6.2506-2510.1988  0.76
1988 Field KG, Olsen GJ, Lane DJ, Giovannoni SJ, Ghiselin MT, Raff EC, Pace NR, Raff RA. Molecular phylogeny of the animal kingdom. Science (New York, N.Y.). 239: 748-53. PMID 3277277 DOI: 10.1126/Science.3277277  0.76
1988 Giovannoni SJ, Turner S, Olsen GJ, Barns S, Lane DJ, Pace NR. Evolutionary relationships among cyanobacteria and green chloroplasts Journal of Bacteriology. 170: 3584-3592. PMID 3136142 DOI: 10.1128/Jb.170.8.3584-3592.1988  0.76
1988 Giovannoni SJ, DeLong EF, Olsen GJ, Pace NR. Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells Journal of Bacteriology. 170: 720-726. PMID 2448289 DOI: 10.1128/Jb.170.2.720-726.1988  0.76
1988 Karl DM, Taylor GT, Novitsky JA, Jannasch HW, Wirsen CO, Pace NR, Lane DJ, Olsen GJ, Giovannoni SJ. A microbiological study of Guaymas Basin high temperature hydrothermal vents Deep Sea Research Part a, Oceanographic Research Papers. 35: 777-791. DOI: 10.1016/0198-0149(88)90030-1  0.76
1987 Giovannoni SJ, Godchaux W, Schabtach E, Castenholz RW. Cell wall and lipid composition of Isosphaera pallida, a budding eubacterium from hot springs Journal of Bacteriology. 169: 2702-2707. PMID 3584067 DOI: 10.1128/Jb.169.6.2702-2707.1987  0.76
1987 Giovannoni SJ, Revsbech NP, Ward DM, Castenholz RW. Obligately phototrophic Chloroflexus: primary production in anaerobic hot spring microbial mats Archives of Microbiology. 147: 80-87. DOI: 10.1007/Bf00492909  0.76
1987 Giovannoni SJ, Schabtach E, Castenholz RW. Isosphaera pallida, gen. and comb. nov., a gliding, budding eubacterium from hot springs Archives of Microbiology. 147: 276-284. DOI: 10.1007/Bf00463488  0.76
1985 Pierson BK, Giovannoni SJ, Stahl DA, Castenholz RW. Heliothrix oregonensis, gen. nov., sp. nov., a phototrophic filamentous gliding bacterium containing bacteriochlorophyll a Archives of Microbiology. 142: 164-167. PMID 2412519 DOI: 10.1007/Bf00447061  0.76
1984 Pierson BK, Giovannoni SJ, Castenholz RW. Physiological ecology of a gliding bacterium containing bacteriochlorophyll a Applied and Environmental Microbiology. 47: 576-584.  0.76
1980 Margulis L, Barghoorn ES, Ashendorf D, Banerjee S, Chase D, Francis S, Giovannoni S, Stolz J. The microbial community in the layered sediments at Laguna Figueroa, Baja California, Mexico: Does it have Precambrian analogues? Precambrian Research. 11: 93-123. DOI: 10.1016/0301-9268(80)90042-X  0.76
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