| Year |
Citation |
Score |
| 2024 |
He S, Taher NM, Hvorecny KL, Ragusa MJ, Bahl CD, Hickman AB, Dyda F, Madden DR. Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in . Biorxiv : the Preprint Server For Biology. PMID 38293063 DOI: 10.1101/2024.01.16.572601 |
0.696 |
|
| 2023 |
Tahti EF, Blount JM, Jackson SN, Gao M, Gill NP, Smith SN, Pederson NJ, Rumph SN, Struyvenberg SA, Mackley IGP, Madden DR, Amacher JF. Additive energetic contributions of multiple peptide positions determine the relative promiscuity of viral and human sequences for PDZ domain targets. Protein Science : a Publication of the Protein Society. e4611. PMID 36851847 DOI: 10.1002/pro.4611 |
0.786 |
|
| 2023 |
Tahti EF, Blount JM, Jackson SN, Gao M, Gill NP, Smith SN, Pederson NJ, Rumph SN, Struyvenberg SA, Mackley IGP, Madden DR, Amacher JF. Additive energetic contributions of multiple peptide positions determine the relative promiscuity of viral and human sequences for PDZ domain targets. Biorxiv : the Preprint Server For Biology. PMID 36711692 DOI: 10.1101/2022.12.31.522388 |
0.789 |
|
| 2022 |
Sheehan CT, Hampton TH, Madden DR. Tryptophan mutations in G3BP1 tune the stability of a cellular signaling hub by weakening transient interactions with Caprin1 and USP10. The Journal of Biological Chemistry. 102552. PMID 36183834 DOI: 10.1016/j.jbc.2022.102552 |
0.35 |
|
| 2021 |
Taher NM, Hvorecny KL, Burke CM, Gilman MSA, Heussler GE, Adolf-Bryfogle J, Bahl CD, O'Toole GA, Madden DR. Biochemical and structural characterization of two cif-like epoxide hydrolases from . Current Research in Structural Biology. 3: 72-84. PMID 34235487 DOI: 10.1016/j.crstbi.2021.02.002 |
0.712 |
|
| 2020 |
Amacher JF, Brooks L, Hampton TH, Madden DR. Specificity in PDZ-peptide interaction networks: Computational analysis and review. Journal of Structural Biology: X. 4: 100022. PMID 32289118 DOI: 10.1016/j.yjsbx.2020.100022 |
0.773 |
|
| 2019 |
Holt GT, Jou JD, Gill NP, Lowegard AU, Martin JW, Madden DR, Donald BR. Computational Analysis of Energy Landscapes Reveals Dynamic Features that Contribute to Binding of Inhibitors to CFTR-Associated Ligand. The Journal of Physical Chemistry. B. PMID 31697075 DOI: 10.1021/Acs.Jpcb.9B07278 |
0.431 |
|
| 2019 |
Vasylieva N, Kitamura S, Dong J, Barnych B, Hvorecny KL, Madden DR, Gee SJ, Wolan DW, Morisseau C, Hammock BD. Nanobody-based binding assay for the discovery of potent inhibitors of CFTR inhibitory factor (Cif). Analytica Chimica Acta. 1057: 106-113. PMID 30832908 DOI: 10.1016/J.Aca.2018.12.060 |
0.335 |
|
| 2018 |
Zhao Y, Cushing PR, Smithson DC, Pellegrini M, Pletnev AA, Al-Ayyoubi S, Grassetti AV, Gerber SA, Guy RK, Madden DR. Correction: Cysteine modification reveals an allosteric inhibitory site on the CAL PDZ domain. Bioscience Reports. PMID 29871975 DOI: 10.1042/Bsr20180231_Cor |
0.78 |
|
| 2018 |
Amacher JF, Zhong F, Lisi GP, Zhu MQ, Alden SL, Hoke KR, Madden DR, Pletneva EV. Correction to "A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch". Journal of the American Chemical Society. PMID 29553265 DOI: 10.1021/jacs.8b02708 |
0.717 |
|
| 2018 |
Zhao Y, Cushing PR, Smithson DC, Pellegrini M, Pletnev AA, Al-Ayyoubi S, Grassetti AV, Gerber SA, Guy RK, Madden DR. Cysteine modification reveals an allosteric inhibitory site on the CAL PDZ domain. Bioscience Reports. PMID 29472314 DOI: 10.1042/Bsr20180231 |
0.821 |
|
| 2017 |
Hvorecny KL, Dolben E, Moreau-Marquis S, Hampton TH, Shabaneh TB, Flitter BA, Bahl CD, Bomberger JM, Levy BD, Stanton BA, Hogan DA, Madden DR. An epoxide hydrolase secreted by Pseudomonas aeruginosa decreases mucociliary transport and hinders bacterial clearance from the lung. American Journal of Physiology. Lung Cellular and Molecular Physiology. ajplung.00383.2017. PMID 28982736 DOI: 10.1152/Ajplung.00383.2017 |
0.681 |
|
| 2017 |
Seisel Q, Rädisch M, Gill NP, Madden DR, Boisguerin P. Optimization of the process of inverted peptides (PIPE(PLUS)) to screen PDZ domain ligands. Bioorganic & Medicinal Chemistry Letters. PMID 28549735 DOI: 10.1016/J.Bmcl.2017.05.045 |
0.419 |
|
| 2017 |
Hvorecny KL, Bahl CD, Kitamura S, Lee KS, Hammock BD, Morisseau C, Madden DR. Active-Site Flexibility and Substrate Specificity in a Bacterial Virulence Factor: Crystallographic Snapshots of an Epoxide Hydrolase. Structure (London, England : 1993). PMID 28392259 DOI: 10.1016/J.Str.2017.03.002 |
0.718 |
|
| 2017 |
Bertrand CA, Mitra S, Mishra SK, Wang X, Zhao Y, Pilewski JM, Madden DR, Frizzell RA. The CFTR trafficking mutation F508del inhibits the constitutive activity of SLC26A9. American Journal of Physiology. Lung Cellular and Molecular Physiology. ajplung.00178.2016. PMID 28360110 DOI: 10.1152/Ajplung.00178.2016 |
0.372 |
|
| 2017 |
Bahl CD, St Laurent JD, Karthikeyan RS, Priya JL, Prajna L, Zegans ME, Madden DR. The cif Virulence Factor Gene Is Present in Isolates From Patients With Pseudomonas aeruginosa Keratitis. Cornea. PMID 28079684 DOI: 10.1097/Ico.0000000000001132 |
0.649 |
|
| 2016 |
Flitter BA, Hvorecny KL, Ono E, Eddens T, Yang J, Kwak DH, Bahl CD, Hampton TH, Morisseau C, Hammock BD, Liu X, Lee JS, Kolls JK, Levy BD, Madden DR, et al. Pseudomonas aeruginosa sabotages the generation of host proresolving lipid mediators. Proceedings of the National Academy of Sciences of the United States of America. PMID 27980032 DOI: 10.1073/Pnas.1610242114 |
0.688 |
|
| 2016 |
Clausen RP, Mohr AØ, Riise E, Jensen AA, Gill A, Madden DR, Kastrup JS, Skottrup PD. A parallel panning scheme used for selection of a GluA4-specific Fab targeting the ligand-binding domain. International Journal of Biological Macromolecules. PMID 27402461 DOI: 10.1016/J.Ijbiomac.2016.07.026 |
0.664 |
|
| 2016 |
Kitamura S, Hvorecny KL, Niu J, Hammock BD, Madden DR, Morisseau C. Rational design of potent and selective inhibitors of an epoxide hydrolase virulence factor from Pseudomonas aeruginosa. Journal of Medicinal Chemistry. PMID 27120257 DOI: 10.1021/Acs.Jmedchem.6B00173 |
0.323 |
|
| 2016 |
Bahl CD, Hvorecny KL, Morisseau C, Gerber SA, Madden DR. Visualizing the Mechanism of Epoxide Hydrolysis by the Bacterial Virulence Enzyme Cif. Biochemistry. 55: 788-97. PMID 26752215 DOI: 10.1021/Acs.Biochem.5B01229 |
0.698 |
|
| 2015 |
Bahl CD, Hvorecny KL, Bomberger JM, Stanton BA, Hammock BD, Morisseau C, Madden DR. Inhibiting an epoxide hydrolase virulence factor from Pseudomonas aeruginosa protects CFTR. Angewandte Chemie (International Ed. in English). PMID 26136396 DOI: 10.1002/Anie.201503983 |
0.719 |
|
| 2015 |
Amacher JF, Zhong F, Lisi GP, Zhu MQ, Alden SL, Hoke KR, Madden DR, Pletneva EV. A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch. Journal of the American Chemical Society. PMID 26038984 DOI: 10.1021/Jacs.5B01493 |
0.765 |
|
| 2015 |
Qian Z, Xu X, Amacher JF, Madden DR, Cormet-Boyaka E, Pei D. Intracellular Delivery of Peptidyl Ligands by Reversible Cyclization: Discovery of a PDZ Domain Inhibitor that Rescues CFTR Activity. Angewandte Chemie (International Ed. in English). 54: 5874-8. PMID 25785567 DOI: 10.1002/Anie.201411594 |
0.763 |
|
| 2014 |
Amacher JF, Zhao R, Spaller MR, Madden DR. Chemically modified peptide scaffolds target the CFTR-associated ligand PDZ domain. Plos One. 9: e103650. PMID 25136860 DOI: 10.1371/Journal.Pone.0103650 |
0.805 |
|
| 2014 |
Koeppen K, Coutermarsh BA, Madden DR, Stanton BA. Serum- and glucocorticoid-induced protein kinase 1 (SGK1) increases the cystic fibrosis transmembrane conductance regulator (CFTR) in airway epithelial cells by phosphorylating Shank2E protein. The Journal of Biological Chemistry. 289: 17142-50. PMID 24811177 DOI: 10.1074/Jbc.M114.555599 |
0.35 |
|
| 2014 |
Bahl CD, Hvorecny KL, Bridges AA, Ballok AE, Bomberger JM, Cady KC, O'Toole GA, Madden DR. Signature motifs identify an Acinetobacter Cif virulence factor with epoxide hydrolase activity. The Journal of Biological Chemistry. 289: 7460-9. PMID 24474692 DOI: 10.1074/Jbc.M113.518092 |
0.729 |
|
| 2014 |
Amacher JF, Cushing PR, Brooks L, Boisguerin P, Madden DR. Stereochemical preferences modulate affinity and selectivity among five PDZ domains that bind CFTR: comparative structural and sequence analyses. Structure (London, England : 1993). 22: 82-93. PMID 24210758 DOI: 10.1016/J.Str.2013.09.019 |
0.814 |
|
| 2013 |
Baranovic J, Ramanujan CS, Kasai N, Midgett CR, Madden DR, Torimitsu K, Ryan JF. Reconstitution of homomeric GluA2(flop) receptors in supported lipid membranes: functional and structural properties. The Journal of Biological Chemistry. 288: 8647-57. PMID 23382380 DOI: 10.1074/Jbc.M112.422105 |
0.754 |
|
| 2013 |
Amacher JF, Cushing PR, Bahl CD, Beck T, Madden DR. Stereochemical determinants of C-terminal specificity in PDZ peptide-binding domains: a novel contribution of the carboxylate-binding loop. The Journal of Biological Chemistry. 288: 5114-26. PMID 23243314 DOI: 10.1074/Jbc.M112.401588 |
0.808 |
|
| 2012 |
Madden DR, Swiatecka-Urban A. Tissue-specific control of CFTR endocytosis by Dab2: Cargo recruitment as a therapeutic target. Communicative & Integrative Biology. 5: 473-6. PMID 23181163 DOI: 10.4161/Cib.21375 |
0.349 |
|
| 2012 |
Ballok AE, Bahl CD, Dolben EL, Lindsay AK, St Laurent JD, Hogan DA, Madden DR, O'Toole GA. Epoxide-mediated CifR repression of cif gene expression utilizes two binding sites in Pseudomonas aeruginosa. Journal of Bacteriology. 194: 5315-24. PMID 22843844 DOI: 10.1128/Jb.00984-12 |
0.714 |
|
| 2012 |
Kundu R, Cushing PR, Popp BV, Zhao Y, Madden DR, Ball ZT. Hybrid organic-inorganic inhibitors of a PDZ interaction that regulates the endocytic fate of CFTR. Angewandte Chemie (International Ed. in English). 51: 7217-20. PMID 22700245 DOI: 10.1002/Anie.201202291 |
0.794 |
|
| 2012 |
Kettenbach AN, Wang T, Faherty BK, Madden DR, Knapp S, Bailey-Kellogg C, Gerber SA. Rapid determination of multiple linear kinase substrate motifs by mass spectrometry. Chemistry & Biology. 19: 608-18. PMID 22633412 DOI: 10.1016/J.Chembiol.2012.04.011 |
0.322 |
|
| 2012 |
Roberts KE, Cushing PR, Boisguerin P, Madden DR, Donald BR. Computational design of a PDZ domain peptide inhibitor that rescues CFTR activity. Plos Computational Biology. 8: e1002477. PMID 22532795 DOI: 10.1371/Journal.Pcbi.1002477 |
0.81 |
|
| 2012 |
Cihil KM, Ellinger P, Fellows A, Stolz DB, Madden DR, Swiatecka-Urban A. Disabled-2 protein facilitates assembly polypeptide-2-independent recruitment of cystic fibrosis transmembrane conductance regulator to endocytic vesicles in polarized human airway epithelial cells. The Journal of Biological Chemistry. 287: 15087-99. PMID 22399289 DOI: 10.1074/Jbc.M112.341875 |
0.358 |
|
| 2012 |
Midgett CR, Gill A, Madden DR. Domain architecture of a calcium-permeable AMPA receptor in a ligand-free conformation. Frontiers in Molecular Neuroscience. 4: 56. PMID 22232575 DOI: 10.3389/Fnmol.2011.00056 |
0.811 |
|
| 2012 |
Bahl CD, Madden DR. Pseudomonas aeruginosa Cif defines a distinct class of α/β epoxide hydrolases utilizing a His/Tyr ring-opening pair. Protein and Peptide Letters. 19: 186-93. PMID 21933119 DOI: 10.2174/092986612799080392 |
0.719 |
|
| 2011 |
Park W, Midgett CR, Madden DR, Chirikjian GS. A Stochastic Kinematic Model of Class Averaging in Single-Particle Electron Microscopy. The International Journal of Robotics Research. 30: 730-754. PMID 21660125 DOI: 10.1177/0278364911400220 |
0.701 |
|
| 2011 |
Amacher JF, Cushing PR, Weiner JA, Madden DR. Crystallization and preliminary diffraction analysis of the CAL PDZ domain in complex with a selective peptide inhibitor. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 67: 600-3. PMID 21543871 DOI: 10.1107/S1744309111009985 |
0.804 |
|
| 2011 |
Gill A, Scanlon TC, Osipovitch DC, Madden DR, Griswold KE. Crystal structure of a charge engineered human lysozyme having enhanced bactericidal activity. Plos One. 6: e16788. PMID 21408218 DOI: 10.1371/Journal.Pone.0016788 |
0.611 |
|
| 2011 |
Navarro MV, Newell PD, Krasteva PV, Chatterjee D, Madden DR, O'Toole GA, Sondermann H. Structural basis for c-di-GMP-mediated inside-out signaling controlling periplasmic proteolysis. Plos Biology. 9: e1000588. PMID 21304926 DOI: 10.1371/Journal.Pbio.1000588 |
0.457 |
|
| 2011 |
Baranovic J, Ramanujan CS, Kasai N, Madden DR, Torimitsu K, Ryan JF. Structural and Functional Characterization of Reconstituted Glua2 Tetramers Biophysical Journal. 100: 269a. DOI: 10.1016/J.Bpj.2010.12.1679 |
0.334 |
|
| 2011 |
Roberts KE, Cushing PR, Boisguerin P, Madden DR, Donald BR. Design of protein-protein interactions with a novel ensemble-based scoring algorithm Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6577: 361-376. DOI: 10.1007/978-3-642-20036-6_35 |
0.775 |
|
| 2010 |
Cushing PR, Vouilleme L, Pellegrini M, Boisguerin P, Madden DR. A stabilizing influence: CAL PDZ inhibition extends the half-life of ΔF508-CFTR. Angewandte Chemie (International Ed. in English). 49: 9907-11. PMID 21105033 DOI: 10.1002/Anie.201005585 |
0.795 |
|
| 2010 |
Vouilleme L, Cushing PR, Volkmer R, Madden DR, Boisguerin P. Engineering peptide inhibitors to overcome PDZ binding promiscuity. Angewandte Chemie (International Ed. in English). 49: 9912-6. PMID 21105032 DOI: 10.1002/Anie.201005575 |
0.815 |
|
| 2010 |
Bahl CD, Morisseau C, Bomberger JM, Stanton BA, Hammock BD, O'Toole GA, Madden DR. Crystal structure of the cystic fibrosis transmembrane conductance regulator inhibitory factor Cif reveals novel active-site features of an epoxide hydrolase virulence factor. Journal of Bacteriology. 192: 1785-95. PMID 20118260 DOI: 10.1128/Jb.01348-09 |
0.726 |
|
| 2010 |
Birdsey-Benson A, Gill A, Henderson LP, Madden DR. Enhanced efficacy without further cleft closure: reevaluating twist as a source of agonist efficacy in AMPA receptors. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 1463-70. PMID 20107073 DOI: 10.1523/Jneurosci.4558-09.2010 |
0.785 |
|
| 2010 |
Bahl CD, MacEachran DP, O'Toole GA, Madden DR. Purification, crystallization and preliminary X-ray diffraction analysis of Cif, a virulence factor secreted by Pseudomonas aeruginosa. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 26-8. PMID 20057063 DOI: 10.1107/S1744309109047599 |
0.709 |
|
| 2009 |
Nayeem N, Zhang Y, Schweppe DK, Madden DR, Green T. A nondesensitizing kainate receptor point mutant. Molecular Pharmacology. 76: 534-42. PMID 19561126 DOI: 10.1124/Mol.109.056598 |
0.396 |
|
| 2008 |
Gill A, Birdsey-Benson A, Jones BL, Henderson LP, Madden DR. Correlating AMPA receptor activation and cleft closure across subunits: crystal structures of the GluR4 ligand-binding domain in complex with full and partial agonists. Biochemistry. 47: 13831-41. PMID 19102704 DOI: 10.1021/Bi8013196 |
0.794 |
|
| 2008 |
Gill A, Madden DR. Purification and crystallization of a non-GluR2 AMPA-receptor ligand-binding domain: a case of cryo-incompatibility addressed by room-temperature data collection. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 64: 831-5. PMID 18765917 DOI: 10.1107/S1744309108025426 |
0.639 |
|
| 2008 |
Cushing PR, Fellows A, Villone D, Boisguérin P, Madden DR. The relative binding affinities of PDZ partners for CFTR: a biochemical basis for efficient endocytic recycling. Biochemistry. 47: 10084-98. PMID 18754678 DOI: 10.1021/Bi8003928 |
0.817 |
|
| 2008 |
Midgett CR, Madden DR. The quaternary structure of a calcium-permeable AMPA receptor: conservation of shape and symmetry across functionally distinct subunit assemblies. Journal of Molecular Biology. 382: 578-84. PMID 18656486 DOI: 10.1016/J.Jmb.2008.07.021 |
0.736 |
|
| 2008 |
Sevvana M, Vijayan V, Zweckstetter M, Reinelt S, Madden DR, Herbst-Irmer R, Sheldrick GM, Bott M, Griesinger C, Becker S. A ligand-induced switch in the periplasmic domain of sensor histidine kinase CitA. Journal of Molecular Biology. 377: 512-23. PMID 18258261 DOI: 10.1016/J.Jmb.2008.01.024 |
0.341 |
|
| 2007 |
Midgett CR, Madden DR. Breaking the bottleneck: eukaryotic membrane protein expression for high-resolution structural studies. Journal of Structural Biology. 160: 265-74. PMID 17702603 DOI: 10.1016/J.Jsb.2007.07.001 |
0.74 |
|
| 2007 |
Madden DR, Safferling M. Baculoviral expression of an integral membrane protein for structural studies. Methods in Molecular Biology (Clifton, N.J.). 363: 39-57. PMID 17272836 DOI: 10.1007/978-1-59745-209-0_3 |
0.38 |
|
| 2007 |
Wolde M, Fellows A, Cheng J, Kivenson A, Coutermarsh B, Talebian L, Karlson K, Piserchio A, Mierke DF, Stanton BA, Guggino WB, Madden DR. Targeting CAL as a negative regulator of DeltaF508-CFTR cell-surface expression: an RNA interference and structure-based mutagenetic approach. The Journal of Biological Chemistry. 282: 8099-109. PMID 17158866 DOI: 10.1074/Jbc.M611049200 |
0.477 |
|
| 2005 |
Madden DR. New light on an open-and-shut case. Nature Chemical Biology. 1: 317-9. PMID 16408066 DOI: 10.1038/Nchembio1105-317 |
0.383 |
|
| 2005 |
Piserchio A, Fellows A, Madden DR, Mierke DF. Association of the cystic fibrosis transmembrane regulator with CAL: structural features and molecular dynamics. Biochemistry. 44: 16158-66. PMID 16331976 DOI: 10.1021/Bi0516475 |
0.389 |
|
| 2005 |
Féthière J, Venzke D, Madden DR, Böttcher B. Peripheral stator of the yeast V-ATPase: stoichiometry and specificity of interaction between the EG complex and subunits C and H. Biochemistry. 44: 15906-14. PMID 16313193 DOI: 10.1021/Bi051762F |
0.363 |
|
| 2005 |
Madden DR, Armstrong N, Svergun D, Pérez J, Vachette P. Solution X-ray scattering evidence for agonist- and antagonist-induced modulation of cleft closure in a glutamate receptor ligand-binding domain. The Journal of Biological Chemistry. 280: 23637-42. PMID 15755731 DOI: 10.1074/Jbc.M414523200 |
0.467 |
|
| 2004 |
Madden DR, Cheng Q, Thiran S, Rajan S, Rigo F, Keinänen K, Reinelt S, Zimmermann H, Jayaraman V. Stereochemistry of glutamate receptor agonist efficacy: engineering a dual-specificity AMPA/kainate receptor. Biochemistry. 43: 15838-44. PMID 15595838 DOI: 10.1021/Bi048447Y |
0.43 |
|
| 2004 |
Tichelaar W, Safferling M, Keinänen K, Stark H, Madden DR. The Three-dimensional Structure of an Ionotropic Glutamate Receptor Reveals a Dimer-of-dimers Assembly. Journal of Molecular Biology. 344: 435-42. PMID 15522296 DOI: 10.1016/J.Jmb.2004.09.048 |
0.393 |
|
| 2003 |
Reinelt S, Hofmann E, Gerharz T, Bott M, Madden DR. The structure of the periplasmic ligand-binding domain of the sensor kinase CitA reveals the first extracellular PAS domain. The Journal of Biological Chemistry. 278: 39189-96. PMID 12867417 DOI: 10.1074/Jbc.M305864200 |
0.463 |
|
| 2003 |
Pasternack A, Coleman SK, Féthière J, Madden DR, LeCaer JP, Rossier J, Pasternack M, Keinänen K. Characterization of the functional role of the N-glycans in the AMPA receptor ligand-binding domain. Journal of Neurochemistry. 84: 1184-92. PMID 12603841 DOI: 10.1046/J.1471-4159.2003.01611.X |
0.443 |
|
| 2002 |
Madden DR. The structure and function of glutamate receptor ion channels. Nature Reviews. Neuroscience. 3: 91-101. PMID 11836517 DOI: 10.1038/Nrn725 |
0.426 |
|
| 2002 |
Klockow B, Tichelaar W, Madden DR, Niemann HH, Akiba T, Hirose K, Manstein DJ. The dynamin A ring complex: molecular organization and nucleotide-dependent conformational changes. The Embo Journal. 21: 240-50. PMID 11823417 DOI: 10.1093/Emboj/21.3.240 |
0.401 |
|
| 2001 |
Safferling M, Tichelaar W, Kümmerle G, Jouppila A, Kuusinen A, Keinänen K, Madden DR. First images of a glutamate receptor ion channel: oligomeric state and molecular dimensions of GluRB homomers. Biochemistry. 40: 13948-53. PMID 11705385 DOI: 10.1021/Bi011143G |
0.369 |
|
| 2001 |
Madden DR, Thiran S, Zimmermann H, Romm J, Jayaraman V. Stereochemistry of quinoxaline antagonist binding to a glutamate receptor investigated by Fourier transform infrared spectroscopy. The Journal of Biological Chemistry. 276: 37821-6. PMID 11481334 DOI: 10.1074/Jbc.M106171200 |
0.434 |
|
| 2001 |
Féthière J, Andersson A, Keinänen K, Madden DR. Crystallization of an AMPA receptor binding domain without agonist: importance of carbohydrate content and flash-cooling conditions. Acta Crystallographica. Section D, Biological Crystallography. 56: 1625-9. PMID 11092929 DOI: 10.1107/S0907444900014104 |
0.424 |
|
| 2000 |
Jayaraman V, Keesey R, Madden DR. Ligand--protein interactions in the glutamate receptor. Biochemistry. 39: 8693-7. PMID 10913279 DOI: 10.1021/Bi000892F |
0.467 |
|
| 2000 |
Jayaraman V, Thiran S, Madden DR. Fourier transform infrared spectroscopic characterization of a photolabile precursor of glutamate. Febs Letters. 475: 278-82. PMID 10869571 DOI: 10.1016/S0014-5793(00)01690-2 |
0.361 |
|
| 2000 |
Madden DR, Abele R, Andersson A, Keinänen K. Large-scale expression and thermodynamic characterization of a glutamate receptor agonist-binding domain. European Journal of Biochemistry. 267: 4281-9. PMID 10866833 DOI: 10.1046/J.1432-1033.2000.01481.X |
0.492 |
|
| 2000 |
Abele R, Keinänen K, Madden DR. Agonist-induced Isomerization in a Glutamate Receptor Ligand-binding Domain A KINETIC AND MUTAGENETIC ANALYSIS Journal of Biological Chemistry. 275: 21355-21363. PMID 10748170 DOI: 10.1074/Jbc.M909883199 |
0.471 |
|
| 1999 |
Kuusinen A, Abele R, Madden DR, Keinänen K. Oligomerization and ligand-binding properties of the ectodomain of the alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor subunit GluRD. The Journal of Biological Chemistry. 274: 28937-43. PMID 10506139 DOI: 10.1074/Jbc.274.41.28937 |
0.465 |
|
| 1999 |
Abele R, Svergun D, Keinänen K, Koch MH, Madden DR. A molecular envelope of the ligand-binding domain of a glutamate receptor in the presence and absence of agonist. Biochemistry. 38: 10949-57. PMID 10460150 DOI: 10.1021/Bi982928Y |
0.513 |
|
| 1998 |
Abele R, Lampinen M, Keinänen K, Madden DR. Disulfide bonding and cysteine accessibility in the α-amino-3-hydroxy-5-methylisoxazole-4-propionic acid receptor subunit GluRD Journal of Biological Chemistry. 273: 25132-25138. PMID 9737972 DOI: 10.1074/Jbc.273.39.25132 |
0.463 |
|
| 1995 |
Madden DR. The three-dimensional structure of peptide-MHC complexes. Annual Review of Immunology. 13: 587-622. PMID 7612235 DOI: 10.1146/Annurev.Iy.13.040195.003103 |
0.395 |
|
| 1994 |
Garboczi DN, Madden DR, Wiley DC. Five viral peptide-HLA-A2 co-crystals. Simultaneous space group determination and X-ray data collection. Journal of Molecular Biology. 239: 581-7. PMID 7516439 DOI: 10.1006/Jmbi.1994.1398 |
0.553 |
|
| 1993 |
Guo HC, Madden DR, Silver ML, Jardetzky TS, Gorga JC, Strominger JL, Wiley DC. Comparison of the P2 specificity pocket in three human histocompatibility antigens: HLA-A*6801, HLA-A*0201, and HLA-B*2705. Proceedings of the National Academy of Sciences of the United States of America. 90: 8053-7. PMID 8367462 DOI: 10.1073/Pnas.90.17.8053 |
0.536 |
|
| 1993 |
Madden DR, Garboczi DN, Wiley DC. The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2. Cell. 75: 693-708. PMID 7694806 DOI: 10.1016/0092-8674(93)90490-H |
0.59 |
|
| 1992 |
Gorga JC, Madden DR, Prendergast JK, Wiley DC, Strominger JL. Crystallization and preliminary X-ray diffraction studies of the human major histocompatibility antigen HLA-B27 Proteins: Structure, Function and Genetics. 12: 87-90. PMID 1553383 DOI: 10.1002/Prot.340120110 |
0.453 |
|
| 1992 |
Madden DR, Gorga JC, Strominger JL, Wiley DC. The three-dimensional structure of HLA-B27 at 2.1 A resolution suggests a general mechanism for tight peptide binding to MHC. Cell. 70: 1035-48. PMID 1525820 DOI: 10.1016/0092-8674(92)90252-8 |
0.531 |
|
| 1992 |
Madden DR, Wiley DC. Peptide binding to major histocompatibility complex molecules Current Biology. 2: 173. DOI: 10.1016/0960-9822(92)90502-2 |
0.59 |
|
| 1992 |
Madden DR, Wiley DC. Peptide binding to the major histocompatibility complex molecules. Current Opinion in Structural Biology 1992, 2:300-304 Current Opinion in Structural Biology. 2: 300-304. DOI: 10.1016/0959-440X(92)90161-Y |
0.554 |
|
| 1991 |
Jardetzky TS, Lane WS, Robinson RA, Madden DR, Wiley DC. Identification of self peptides bound to purified HLA-B27. Nature. 353: 326-9. PMID 1922338 DOI: 10.1038/353326A0 |
0.524 |
|
| 1991 |
Madden DR, Gorga JC, Strominger JL, Wiley DC. The structure of HLA-B27 reveals nonamer self-peptides bound in an extended conformation Nature. 353: 321-325. PMID 1922337 DOI: 10.1038/353321A0 |
0.538 |
|
| 1989 |
Madden DR, Saper MA, Garrett TP, Bjorkman PJ, Strominger JL, Wiley DC. Comparison of orthorhombic and monoclinic crystal structures of HLA-A2. Cold Spring Harbor Symposia On Quantitative Biology. 54: 353-9. PMID 2639758 DOI: 10.1101/Sqb.1989.054.01.043 |
0.583 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2006 |
Madden DR, Cheng Q, Thiran S, Rajan S, Rigo F, Keinänen K, Reinelt S, Zimmermann H, Jayaraman V. Erratum: Stereochemistry of glutamate receptor agonist efficacy: Engineering a dual-specificity AMPA/kainate receptor (Biochemistry (December 21, 2004) 43, 50 (15838-15844)) Biochemistry. 45. DOI: 10.1021/Bi0680025 |
0.274 |
|
| 2010 |
Park W, Madden DR, Rockmore DN, Chirikjian GS. Statistical Analysis and Deblurring of Class Averages in Single-Particle Electron Microscopy Biophysical Journal. 98: 385a. DOI: 10.1016/J.Bpj.2009.12.2071 |
0.243 |
|
| 2010 |
Park W, Madden DR, Rockmore DN, Chirikjian GS. Deblurring of Class-Averaged Images in Single-Particle Electron Microscopy. Inverse Problems. 26: 3500521-35005229. PMID 20221416 DOI: 10.1088/0266-5611/26/3/035002 |
0.226 |
|
| 2021 |
O'Toole GA, Crabbé A, Kümmerli R, LiPuma JJ, Bomberger JM, Davies JC, Limoli D, Phelan VV, Bliska JB, DePas WH, Dietrich LE, Hampton TH, Hunter R, Khursigara CM, Price-Whelan A, ... ... Madden DR, et al. Model Systems to Study the Chronic, Polymicrobial Infections in Cystic Fibrosis: Current Approaches and Exploring Future Directions. Mbio. e0176321. PMID 34544277 DOI: 10.1128/mBio.01763-21 |
0.108 |
|
| 2002 |
Madden DR. The inner workings of the AMPA receptors. Current Opinion in Drug Discovery & Development. 5: 741-8. PMID 12630294 |
0.106 |
|
| 2023 |
Siddall A, Williams AA, Sanders J, Denton JA, Madden D, Schollar J, Bryk J. Unigems: plasmids and parts to facilitate teaching on assembly, gene expression control and logic in . Access Microbiology. 5. PMID 37841098 DOI: 10.1099/acmi.0.000596.v3 |
0.101 |
|
| 1989 |
McCance DR, Traub AI, Harley JMG, Madden DR, Kennedy L. Urinary albumin excretion in diabetic pregnancy Diabetologia. 32: 236-239. PMID 2759362 DOI: 10.1007/BF00285290 |
0.017 |
|
| Hide low-probability matches. |