| Year |
Citation |
Score |
| 2014 |
Noguera DR, Wright ES, Camejo P, Yilmaz LS. Mathematical tools to optimize the design of oligonucleotide probes and primers. Applied Microbiology and Biotechnology. 98: 9595-608. PMID 25359473 DOI: 10.1007/S00253-014-6165-X |
0.672 |
|
| 2014 |
Wright ES, Yilmaz LS, Corcoran AM, Ökten HE, Noguera DR. Automated design of probes for rRNA-targeted fluorescence in situ hybridization reveals the advantages of using dual probes for accurate identification. Applied and Environmental Microbiology. 80: 5124-33. PMID 24928876 DOI: 10.1128/Aem.01685-14 |
0.748 |
|
| 2014 |
Wright ES, Yilmaz LS, Ram S, Gasser JM, Harrington GW, Noguera DR. Exploiting extension bias in polymerase chain reaction to improve primer specificity in ensembles of nearly identical DNA templates. Environmental Microbiology. 16: 1354-65. PMID 24750536 DOI: 10.1111/1462-2920.12259 |
0.623 |
|
| 2012 |
Yilmaz LS, Loy A, Wright ES, Wagner M, Noguera DR. Modeling formamide denaturation of probe-target hybrids for improved microarray probe design in microbial diagnostics. Plos One. 7: e43862. PMID 22952791 DOI: 10.1371/Journal.Pone.0043862 |
0.732 |
|
| 2012 |
Okten HE, Yilmaz LS, Noguera DR. Exploring the in situ accessibility of small subunit ribosomal RNA of members of the domains Bacteria and Eukarya to oligonucleotide probes. Systematic and Applied Microbiology. 35: 485-95. PMID 22264799 DOI: 10.1016/J.Syapm.2011.11.001 |
0.737 |
|
| 2012 |
Wright ES, Yilmaz LS, Noguera DR. DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences. Applied and Environmental Microbiology. 78: 717-25. PMID 22101057 DOI: 10.1128/Aem.06516-11 |
0.518 |
|
| 2011 |
Yilmaz LS, Parnerkar S, Noguera DR. mathFISH, a web tool that uses thermodynamics-based mathematical models for in silico evaluation of oligonucleotide probes for fluorescence in situ hybridization. Applied and Environmental Microbiology. 77: 1118-22. PMID 21148691 DOI: 10.1128/Aem.01733-10 |
0.736 |
|
| 2010 |
Yilmaz LS, Kontur WS, Sanders AP, Sohmen U, Donohue TJ, Noguera DR. Electron partitioning during light- and nutrient-powered hydrogen production by Rhodobacter sphaeroides Bioenergy Research. 3: 55-66. DOI: 10.1007/S12155-009-9072-8 |
0.469 |
|
| 2010 |
Yilmaz LS, Starke J, Ramos F, Gall D, Harrington GW, Noguera DR. Designing high-density microarrays for detection of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) in water samples Water Quality Technology Conference and Exposition 2010. 2663-2668. |
0.415 |
|
| 2008 |
Yilmaz LS, Bergsven LI, Noguera DR. Systematic evaluation of single mismatch stability predictors for fluorescence in situ hybridization. Environmental Microbiology. 10: 2872-85. PMID 18707615 DOI: 10.1111/J.1462-2920.2008.01719.X |
0.658 |
|
| 2008 |
Hoshino T, Yilmaz LS, Noguera DR, Daims H, Wagner M. Quantification of target molecules needed to detect microorganisms by fluorescence in situ hybridization (FISH) and catalyzed reporter deposition-FISH. Applied and Environmental Microbiology. 74: 5068-77. PMID 18552182 DOI: 10.1128/Aem.00208-08 |
0.695 |
|
| 2007 |
Yilmaz LS, Noguera DR. Development of thermodynamic models for simulating probe dissociation profiles in fluorescence in situ hybridization. Biotechnology and Bioengineering. 96: 349-63. PMID 16878331 DOI: 10.1002/Bit.21114 |
0.707 |
|
| 2006 |
Yilmaz LS, Okten HE, Noguera DR. Making all parts of the 16S rRNA of Escherichia coli accessible in situ to single DNA oligonucleotides. Applied and Environmental Microbiology. 72: 733-44. PMID 16391113 DOI: 10.1128/AEM.72.1.733-744.2006 |
0.747 |
|
| 2004 |
Yilmaz LS, Noguera DR. Mechanistic approach to the problem of hybridization efficiency in fluorescent in situ hybridization. Applied and Environmental Microbiology. 70: 7126-39. PMID 15574909 DOI: 10.1128/Aem.70.12.7126-7139.2004 |
0.728 |
|
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