Joshua A. Granek, Ph.D. - Publications

Affiliations: 
2006 Johns Hopkins University, Baltimore, MD 
Area:
Molecular Biology, Computer Science

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Sun S, Yadav V, Billmyre RB, Cuomo CA, Nowrousian M, Wang L, Souciet JL, Boekhout T, Porcel B, Wincker P, Granek JA, Sanyal K, Heitman J. Fungal genome and mating system transitions facilitated by chromosomal translocations involving intercentromeric recombination. Plos Biology. 15: e2002527. PMID 28800596 DOI: 10.1371/Journal.Pbio.2002527  0.409
2017 Chow EW, Clancey SA, Billmyre RB, Averette AF, Granek JA, Mieczkowski P, Cardenas ME, Heitman J. Elucidation of the calcineurin-Crz1 stress response transcriptional network in the human fungal pathogen Cryptococcus neoformans. Plos Genetics. 13: e1006667. PMID 28376087 DOI: 10.1371/Journal.Pgen.1006667  0.375
2015 Esher SK, Granek JA, Alspaugh JA. Rapid mapping of insertional mutations to probe cell wall regulation in Cryptococcus neoformans. Fungal Genetics and Biology : Fg & B. 82: 9-21. PMID 26112692 DOI: 10.1016/J.Fgb.2015.06.003  0.428
2015 Kokes M, Dunn JD, Granek JA, Nguyen BD, Barker JR, Valdivia RH, Bastidas RJ. Integrating chemical mutagenesis and whole-genome sequencing as a platform for forward and reverse genetic analysis of Chlamydia. Cell Host & Microbe. 17: 716-25. PMID 25920978 DOI: 10.1016/J.Chom.2015.03.014  0.426
2013 Granek JA, Murray D, Kayrkçi Ö, Magwene PM. The genetic architecture of biofilm formation in a clinical isolate of Saccharomyces cerevisiae. Genetics. 193: 587-600. PMID 23172850 DOI: 10.1534/Genetics.112.142067  0.71
2011 Granek JA, Kayıkçı Ö, Magwene PM. Pleiotropic signaling pathways orchestrate yeast development. Current Opinion in Microbiology. 14: 676-81. PMID 21962291 DOI: 10.1016/J.Mib.2011.09.004  0.683
2011 Magwene PM, Kayıkçı Ö, Granek JA, Reininga JM, Scholl Z, Murray D. Outcrossing, mitotic recombination, and life-history trade-offs shape genome evolution in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. 108: 1987-92. PMID 21245305 DOI: 10.1073/Pnas.1012544108  0.527
2010 Granek JA, Magwene PM. Environmental and genetic determinants of colony morphology in yeast. Plos Genetics. 6: e1000823. PMID 20107600 DOI: 10.1371/Journal.Pgen.1000823  0.717
2006 Liu X, Lee CK, Granek JA, Clarke ND, Lieb JD. Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection. Genome Research. 16: 1517-28. PMID 17053089 DOI: 10.1101/Gr.5655606  0.608
2005 Granek JA, Clarke ND. Explicit equilibrium modeling of transcription-factor binding and gene regulation. Genome Biology. 6: R87. PMID 16207358 DOI: 10.1186/Gb-2005-6-10-R87  0.574
2004 Carroll KL, Pradhan DA, Granek JA, Clarke ND, Corden JL. Identification of cis elements directing termination of yeast nonpolyadenylated snoRNA transcripts. Molecular and Cellular Biology. 24: 6241-52. PMID 15226427 DOI: 10.1128/Mcb.24.14.6241-6252.2004  0.53
2003 Clarke ND, Granek JA. Rank order metrics for quantifying the association of sequence features with gene regulation. Bioinformatics (Oxford, England). 19: 212-8. PMID 12538241 DOI: 10.1093/Bioinformatics/19.2.212  0.608
1999 Noll DM, Gogos A, Granek JA, Clarke ND. The C-terminal domain of the adenine-DNA glycosylase MutY confers specificity for 8-oxoguanine.adenine mispairs and may have evolved from MutT, an 8-oxo-dGTPase. Biochemistry. 38: 6374-9. PMID 10350454 DOI: 10.1021/Bi990335X  0.662
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