Lee Rybeck Lynd - Publications

Affiliations: 
Engineering Dartmouth College, Hanover, NH, United States 
Area:
Microbiology Biology
Website:
http://biology.dartmouth.edu/people/lee-r-lynd

211 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Koendjbiharie JG, Hon S, Pabst M, Hooftman R, Stevenson DM, Cui J, Amador-Noguez D, Lynd LR, Olson DG, van Kranenburg R. The pentose phosphate pathway of cellulolytic clostridia relies on 6-phosphofructokinase instead of transaldolase. The Journal of Biological Chemistry. PMID 31871051 DOI: 10.1074/jbc.RA119.011239  0.44
2019 Hannon JR, Lynd LR, Andrade O, Benavides PT, Beckham GT, Biddy MJ, Brown N, Chagas MF, Davison BH, Foust T, Junqueira TL, Laser MS, Li Z, Richard T, Tao L, et al. Technoeconomic and life-cycle analysis of single-step catalytic conversion of wet ethanol into fungible fuel blendstocks. Proceedings of the National Academy of Sciences of the United States of America. PMID 31767762 DOI: 10.1073/pnas.1821684116  0.36
2019 Monteiro LA, Allee A, Campbell EE, Lynd LR, Soares JR, Jaiswal D, de C Oliveira J, Dos Santos Vianna M, Morishige AE, K D A Figueiredo G, Lamparelli RAC, Mueller ND, Gerber J, Cortez LAB, Sheehan JJ. Assessment of Yield Gaps on Global Grazed-Only Permanent Pasture using Climate Binning. Global Change Biology. PMID 31730282 DOI: 10.1111/gcb.14925  0.36
2019 Tian L, Conway PM, Cervenka ND, Cui J, Maloney M, Olson DG, Lynd LR. Metabolic engineering of for -butanol production from cellulose. Biotechnology For Biofuels. 12: 186. PMID 31367231 DOI: 10.1186/s13068-019-1524-6  0.44
2019 Dash S, Olson DG, Joshua Chan SH, Amador-Noguez D, Lynd LR, Maranas CD. Thermodynamic analysis of the pathway for ethanol production from cellobiose in Clostridium thermocellum. Metabolic Engineering. PMID 31220663 DOI: 10.1016/j.ymben.2019.06.006  0.44
2019 Holwerda EK, Worthen RS, Kothari N, Lasky RC, Davison BH, Fu C, Wang ZY, Dixon RA, Biswal AK, Mohnen D, Nelson RS, Baxter HL, Mazarei M, Stewart CN, Muchero W, ... ... Lynd LR, et al. Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass. Biotechnology For Biofuels. 12: 25. PMID 30774713 DOI: 10.1186/s13068-019-1363-5  0.92
2019 Tian L, Cervenka ND, Low AM, Olson DG, Lynd LR. A mutation in the AdhE alcohol dehydrogenase of Clostridium thermocellum increases tolerance to several primary alcohols, including isobutanol, n-butanol and ethanol. Scientific Reports. 9: 1736. PMID 30741948 DOI: 10.1038/s41598-018-37979-5  0.44
2019 Holwerda EK, Worthen RS, Kothari N, Lasky RC, Davison BH, Fu C, Wang ZY, Dixon RA, Biswal AK, Mohnen D, Nelson RS, Baxter HL, Mazarei M, Muchero W, Tuskan GA, ... ... Lynd LR, et al. Multiple levers for overcoming the recalcitrance of lignocellulosic biomass. Biotechnology For Biofuels. 12: 15. PMID 30675183 DOI: 10.1186/s13068-019-1353-7  0.92
2019 Lo J, Zheng T, Hon S, Olson DG, Lynd LR. Correction for Lo et al., "The Bifunctional Alcohol and Aldehyde Dehydrogenase Gene, , Is Necessary for Ethanol Production in Clostridium thermocellum and Thermoanaerobacterium saccharolyticum". Journal of Bacteriology. 201. PMID 30530845 DOI: 10.1128/JB.00405-18  0.44
2018 Cui J, Olson DG, Lynd LR. Characterization of the Clostridium thermocellum AdhE, NfnAB, Ferredoxin and Pfor proteins for their ability to support high titer ethanol production in Thermoanaerobacterium saccharolyticum. Metabolic Engineering. PMID 30218716 DOI: 10.1016/j.ymben.2018.09.006  0.44
2018 Ghosh S, Holwerda EK, Worthen RS, Lynd LR, Epps BP. Rheological properties of corn stover slurries during fermentation by . Biotechnology For Biofuels. 11: 246. PMID 30202441 DOI: 10.1186/s13068-018-1248-z  0.92
2018 Liang X, Whitham JM, Holwerda EK, Shao X, Tian L, Wu YW, Lombard V, Henrissat B, Klingeman DM, Yang ZK, Podar M, Richard TL, Elkins JG, Brown SD, Lynd LR. Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times. Biotechnology For Biofuels. 11: 243. PMID 30202438 DOI: 10.1186/s13068-018-1238-1  0.96
2018 Hon S, Holwerda EK, Worthen RS, Maloney MI, Tian L, Cui J, Lin PP, Lynd LR, Olson DG. Expressing the in engineered improves ethanol production. Biotechnology For Biofuels. 11: 242. PMID 30202437 DOI: 10.1186/s13068-018-1245-2  0.92
2018 Zheng T, Lanahan AA, Lynd LR, Olson DG. The redox-sensing protein Rex modulates ethanol production in Thermoanaerobacterium saccharolyticum. Plos One. 13: e0195143. PMID 29621294 DOI: 10.1371/journal.pone.0195143  0.44
2017 Eminoğlu A, Murphy SJ, Maloney M, Lanahan A, Giannone RJ, Hettich RL, Tripathi SA, Beldüz AO, Lynd LR, Olson DG. Deletion of the hfsB gene increases ethanol production in Thermoanaerobacterium saccharolyticum and several other thermophilic anaerobic bacteria. Biotechnology For Biofuels. 10: 282. PMID 29213322 DOI: 10.1186/s13068-017-0968-9  0.44
2017 Tian L, Perot SJ, Stevenson D, Jacobson T, Lanahan AA, Amador-Noguez D, Olson DG, Lynd LR. Metabolome analysis reveals a role for glyceraldehyde 3-phosphate dehydrogenase in the inhibition of C. thermocellum by ethanol. Biotechnology For Biofuels. 10: 276. PMID 29213320 DOI: 10.1186/s13068-017-0961-3  0.44
2017 Zheng T, Cui J, Bae HR, Lynd LR, Olson DG. Expression of adhA from different organisms in Clostridium thermocellum. Biotechnology For Biofuels. 10: 251. PMID 29213311 DOI: 10.1186/s13068-017-0940-8  0.44
2017 Bomble YJ, Lin CY, Amore A, Wei H, Holwerda EK, Ciesielski PN, Donohoe BS, Decker SR, Lynd LR, Himmel ME. Lignocellulose deconstruction in the biosphere. Current Opinion in Chemical Biology. 41: 61-70. PMID 29100023 DOI: 10.1016/j.cbpa.2017.10.013  0.92
2017 Tian L, Perot SJ, Hon S, Zhou J, Liang X, Bouvier JT, Guss AM, Olson DG, Lynd LR. Enhanced ethanol formation by Clostridium thermocellum via pyruvate decarboxylase. Microbial Cell Factories. 16: 171. PMID 28978312 DOI: 10.1186/s12934-017-0783-9  0.44
2017 Hon S, Olson DG, Holwerda EK, Lanahan AA, Jean-Loup Murphy S, Maloney MI, Zheng T, Papanek B, Guss AM, Lynd LR. The ethanol pathway from Thermoanaerobacterium saccharolyticum improves ethanol production in Clostridium thermocellum. Metabolic Engineering. PMID 28663138 DOI: 10.1016/j.ymben.2017.06.011  0.92
2017 Lynd LR, Liang X, Biddy MJ, Allee A, Cai H, Foust T, Himmel ME, Laser MS, Wang M, Wyman CE. Cellulosic ethanol: status and innovation. Current Opinion in Biotechnology. 45: 202-211. PMID 28528086 DOI: 10.1016/j.copbio.2017.03.008  0.36
2017 Dash S, Khodayari A, Zhou J, Holwerda EK, Olson DG, Lynd LR, Maranas CD. Development of a core Clostridium thermocellum kinetic metabolic model consistent with multiple genetic perturbations. Biotechnology For Biofuels. 10: 108. PMID 28469704 DOI: 10.1186/s13068-017-0792-2  0.92
2017 Zhou J, Shao X, Olson DG, Murphy SJ, Tian L, Lynd LR. Determining the roles of the three alcohol dehydrogenases (AdhA, AdhB and AdhE) in Thermoanaerobacter ethanolicus during ethanol formation. Journal of Industrial Microbiology & Biotechnology. PMID 28078513 DOI: 10.1007/s10295-016-1896-6  0.96
2016 Groom J, Chung D, Olson DG, Lynd LR, Guss AM, Westpheling J. Promiscuous plasmid replication in thermophiles: Use of a novel hyperthermophilic replicon for genetic manipulation ofat its optimum growth temperature. Metabolic Engineering Communications. 3: 30-38. PMID 29468112 DOI: 10.1016/j.meteno.2016.01.004  0.44
2016 Hon S, Lanahan AA, Tian L, Giannone RJ, Hettich RL, Olson DG, Lynd LR. Development of a plasmid-based expression system in Clostridium thermocellum and its use to screen heterologous expression of bifunctional alcohol dehydrogenases (adhEs). Metabolic Engineering Communications. 3: 120-129. PMID 29142822 DOI: 10.1016/j.meteno.2016.04.001  0.44
2016 Lo J, Olson DG, Murphy SJ, Tian L, Hon S, Lanahan A, Guss AM, Lynd LR. Engineering electron metabolism to increase ethanol production in Clostridium thermocellum. Metabolic Engineering. PMID 27989806 DOI: 10.1016/j.ymben.2016.10.018  0.44
2016 Olson DG, Hörl M, Fuhrer T, Cui J, Zhou J, Maloney MI, Amador-Noguez D, Tian L, Sauer U, Lynd LR. Glycolysis without pyruvate kinase in Clostridium thermocellum. Metabolic Engineering. PMID 27914869 DOI: 10.1016/j.ymben.2016.11.011  0.44
2016 Zheng T, Olson DG, Murphy SJ, Shao X, Tian L, Lynd LR. Both adhE and a separate NADPH-dependent alcohol dehydrogenase (adhA) are necessary for high ethanol production in Thermoanaerobacterium saccharolyticum. Journal of Bacteriology. PMID 27849176 DOI: 10.1128/JB.00542-16  0.96
2016 Tian L, Lo J, Shao X, Zheng T, Olson DG, Lynd LR. Identification of a ferredoxin:NAD+ oxidoreductase enzyme in Thermoanaerobacterium saccharolyticum and its role in ethanol formation. Applied and Environmental Microbiology. PMID 27694237 DOI: 10.1128/AEM.02130-16  0.96
2016 Herring CD, Kenealy WR, Joe Shaw A, Covalla SF, Olson DG, Zhang J, Ryan Sillers W, Tsakraklides V, Bardsley JS, Rogers SR, Thorne PG, Johnson JP, Foster A, Shikhare ID, Klingeman DM, ... ... Lynd LR, et al. Strain and bioprocess improvement of a thermophilic anaerobe for the production of ethanol from wood. Biotechnology For Biofuels. 9: 125. PMID 27313661 DOI: 10.1186/s13068-016-0536-8  1
2016 Tian L, Papanek B, Olson DG, Rydzak T, Holwerda EK, Zheng T, Zhou J, Maloney M, Jiang N, Giannone RJ, Hettich RL, Guss AM, Lynd LR. Simultaneous achievement of high ethanol yield and titer in Clostridium thermocellum. Biotechnology For Biofuels. 9: 116. PMID 27257435 DOI: 10.1186/s13068-016-0528-8  1
2016 Beri D, Olson DG, Holwerda EK, Lynd LR. Nicotinamide cofactor ratios in engineered strains of Clostridium thermocellum and Thermoanaerobacterium saccharolyticum. Fems Microbiology Letters. 363. PMID 27190292 DOI: 10.1093/femsle/fnw091  1
2016 Shao X, Zhou J, Olson DG, Lynd LR. A markerless gene deletion and integration system for Thermoanaerobacter ethanolicus. Biotechnology For Biofuels. 9: 100. PMID 27152121 DOI: 10.1186/s13068-016-0514-1  1
2016 Xu Q, Resch MG, Podkaminer K, Yang S, Baker JO, Donohoe BS, Wilson C, Klingeman DM, Olson DG, Decker SR, Giannone RJ, Hettich RL, Brown SD, Lynd LR, Bayer EA, et al. Dramatic performance of Clostridium thermocellum explained by its wide range of cellulase modalities. Science Advances. 2: e1501254. PMID 26989779 DOI: 10.1126/sciadv.1501254  1
2016 Herring CD, Thorne PG, Lynd LR. Clostridium thermocellum releases coumaric acid during degradation of untreated grasses by the action of an unknown enzyme. Applied Microbiology and Biotechnology. PMID 26762388 DOI: 10.1007/s00253-016-7294-1  1
2016 Paye JM, Guseva A, Hammer SK, Gjersing E, Davis MF, Davison BH, Olstad J, Donohoe BS, Nguyen TY, Wyman CE, Pattathil S, Hahn MG, Lynd LR. Biological lignocellulose solubilization: comparative evaluation of biocatalysts and enhancement via cotreatment. Biotechnology For Biofuels. 9: 8. PMID 26759604 DOI: 10.1186/s13068-015-0412-y  1
2016 Groom J, Chung D, Olson DG, Lynd LR, Guss AM, Westpheling J. Promiscuous plasmid replication in thermophiles: Use of a novel hyperthermophilic replicon for genetic manipulation of Clostridium thermocellum at its optimum growth temperature Metabolic Engineering Communications. 3: 30-38. DOI: 10.1016/j.meteno.2016.01.004  1
2015 Thompson RA, Layton DS, Guss AM, Olson DG, Lynd LR, Trinh CT. Elucidating central metabolic redox obstacles hindering ethanol production in Clostridium thermocellum. Metabolic Engineering. 32: 207-219. PMID 26497628 DOI: 10.1016/j.ymben.2015.10.004  1
2015 Lo J, Zheng T, Olson DG, Ruppertsberger N, Tripathi SA, Tian L, Guss AM, Lynd LR. Correction for Lo et al., Deletion of nfnAB in Thermoanaerobacterium saccharolyticum and Its Effect on Metabolism. Journal of Bacteriology. 197: 3367. PMID 26381190 DOI: 10.1128/JB.00688-15  1
2015 Zhou J, Olson DG, Lanahan AA, Tian L, Murphy SJ, Lo J, Lynd LR. Physiological roles of pyruvate ferredoxin oxidoreductase and pyruvate formate-lyase in Thermoanaerobacterium saccharolyticum JW/SL-YS485. Biotechnology For Biofuels. 8: 138. PMID 26379770 DOI: 10.1186/s13068-015-0304-1  1
2015 Sand A, Holwerda EK, Ruppertsberger NM, Maloney M, Olson DG, Nataf Y, Borovok I, Sonenshein AL, Bayer EA, Lamed R, Lynd LR, Shoham Y. Three cellulosomal xylanase genes in Clostridium thermocellum are regulated by both vegetative SigA (σ(A)) and alternative SigI6 (σ(I6)) factors. Febs Letters. 589: 3133-40. PMID 26320414 DOI: 10.1016/j.febslet.2015.08.026  1
2015 Rooney EA, Rowe KT, Guseva A, Huntemann M, Han JK, Chen A, Kyrpides NC, Mavromatis K, Markowitz VM, Palaniappan K, Ivanova N, Pati A, Liolios K, Nordberg HP, Cantor MN, ... ... Lynd LR, et al. Draft Genome Sequence of the Cellulolytic and Xylanolytic Thermophile Clostridium clariflavum Strain 4-2a. Genome Announcements. 3. PMID 26205857 DOI: 10.1128/genomeA.00797-15  0.56
2015 Rydzak T, Lynd LR, Guss AM. Elimination of formate production in Clostridium thermocellum. Journal of Industrial Microbiology & Biotechnology. 42: 1263-72. PMID 26162629 DOI: 10.1007/s10295-015-1644-3  1
2015 Lo J, Zheng T, Olson DG, Ruppertsberger N, Tripathi SA, Guss AM, Lynd LR. Deletion of nfnAB in Thermoanaerobacterium saccharolyticum and its effect on metabolism. Journal of Bacteriology. PMID 26124241 DOI: 10.1128/JB.00347-15  1
2015 Currie DH, Raman B, Gowen CM, Tschaplinski TJ, Land ML, Brown SD, Covalla SF, Klingeman DM, Yang ZK, Engle NL, Johnson CM, Rodriguez M, Shaw AJ, Kenealy WR, Lynd LR, et al. Genome-scale resources for Thermoanaerobacterium saccharolyticum. Bmc Systems Biology. 9: 30. PMID 26111937 DOI: 10.1186/s12918-015-0159-x  0.68
2015 Zheng T, Olson DG, Tian L, Bomble YJ, Himmel ME, Lo J, Hon S, Shaw AJ, van Dijken JP, Lynd LR. Cofactor Specificity of the Bifunctional Alcohol and Aldehyde Dehydrogenase (AdhE) in Wild-Type and Mutant Clostridium thermocellum and Thermoanaerobacterium saccharolyticum. Journal of Bacteriology. 197: 2610-9. PMID 26013492 DOI: 10.1128/JB.00232-15  1
2015 Mearls EB, Olson DG, Herring CD, Lynd LR. Development of a regulatable plasmid-based gene expression system for Clostridium thermocellum. Applied Microbiology and Biotechnology. 99: 7589-99. PMID 25994254 DOI: 10.1007/s00253-015-6610-5  1
2015 Filkins LM, Graber JA, Olson DG, Dolben EL, Lynd LR, Bhuju S, O'Toole GA. Coculture of Staphylococcus aureus with Pseudomonas aeruginosa Drives S. aureus towards Fermentative Metabolism and Reduced Viability in a Cystic Fibrosis Model. Journal of Bacteriology. 197: 2252-64. PMID 25917910 DOI: 10.1128/JB.00059-15  1
2015 Shao X, DiMarco K, Richard TL, Lynd LR. Winter rye as a bioenergy feedstock: impact of crop maturity on composition, biological solubilization and potential revenue. Biotechnology For Biofuels. 8: 35. PMID 25798193 DOI: 10.1186/s13068-015-0225-z  1
2015 Biswas R, Zheng T, Olson DG, Lynd LR, Guss AM. Elimination of hydrogenase active site assembly blocks H2 production and increases ethanol yield in Clostridium thermocellum. Biotechnology For Biofuels. 8: 20. PMID 25763101 DOI: 10.1186/s13068-015-0204-4  1
2015 Olson DG, Sparling R, Lynd LR. Ethanol production by engineered thermophiles. Current Opinion in Biotechnology. 33: 130-141. PMID 25745810 DOI: 10.1016/j.copbio.2015.02.006  1
2015 Lynd LR, Sow M, Chimphango AF, Cortez LA, Brito Cruz CH, Elmissiry M, Laser M, Mayaki IA, Moraes MA, Nogueira LA, Wolfaardt GM, Woods J, van Zyl WH. Bioenergy and African transformation. Biotechnology For Biofuels. 8: 18. PMID 25709714 DOI: 10.1186/s13068-014-0188-5  1
2015 Lo J, Zheng T, Hon S, Olson DG, Lynd LR. The bifunctional alcohol and aldehyde dehydrogenase gene, adhE, is necessary for ethanol production in Clostridium thermocellum and Thermoanaerobacterium saccharolyticum. Journal of Bacteriology. 197: 1386-93. PMID 25666131 DOI: 10.1128/JB.02450-14  1
2015 Olson DG, Maloney M, Lanahan AA, Hon S, Hauser LJ, Lynd LR. Identifying promoters for gene expression in Clostridium thermocellum Metabolic Engineering Communications. 2: 23-29. DOI: 10.1016/j.meteno.2015.03.002  1
2015 Fulton LM, Lynd LR, Körner A, Greene N, Tonachel LR. The need for biofuels as part of a low carbon energy future Biofuels, Bioproducts and Biorefining. 9: 476-483. DOI: 10.1002/bbb.1559  1
2015 Archambault-Léger V, Losordo Z, Lynd LR. Energy, sugar dilution, and economic analysis of hot water flow-through pre-treatment for producing biofuel from sugarcane residues Biofuels, Bioproducts and Biorefining. 9: 95-108. DOI: 10.1002/bbb.1524  1
2014 Izquierdo JA, Pattathil S, Guseva A, Hahn MG, Lynd LR. Comparative analysis of the ability of Clostridium clariflavum strains and Clostridium thermocellum to utilize hemicellulose and unpretreated plant material. Biotechnology For Biofuels. 7: 136. PMID 25426163 DOI: 10.1186/s13068-014-0136-4  0.56
2014 Holwerda EK, Thorne PG, Olson DG, Amador-Noguez D, Engle NL, Tschaplinski TJ, van Dijken JP, Lynd LR. The exometabolome of Clostridium thermocellum reveals overflow metabolism at high cellulose loading. Biotechnology For Biofuels. 7: 155. PMID 25379055 DOI: 10.1186/s13068-014-0155-1  0.92
2014 Archambault-Léger V, Shao X, Lynd LR. Simulated performance of reactor configurations for hot-water pretreatment of sugarcane bagasse. Chemsuschem. 7: 2721-7. PMID 25088298 DOI: 10.1002/cssc.201402087  1
2014 Dale BE, Anderson JE, Brown RC, Csonka S, Dale VH, Herwick G, Jackson RD, Jordan N, Kaffka S, Kline KL, Lynd LR, Malmstrom C, Ong RG, Richard TL, Taylor C, et al. Take a closer look: biofuels can support environmental, economic and social goals. Environmental Science & Technology. 48: 7200-3. PMID 24934084 DOI: 10.1021/es5025433  1
2014 Mearls EB, Lynd LR. The identification of four histidine kinases that influence sporulation in Clostridium thermocellum. Anaerobe. 28: 109-19. PMID 24933585 DOI: 10.1016/j.anaerobe.2014.06.004  1
2014 Currie DH, Guss AM, Herring CD, Giannone RJ, Johnson CM, Lankford PK, Brown SD, Hettich RL, Lynd LR. Profile of secreted hydrolases, associated proteins, and SlpA in Thermoanaerobacterium saccharolyticum during the degradation of hemicellulose. Applied and Environmental Microbiology. 80: 5001-11. PMID 24907337 DOI: 10.1128/AEM.00998-14  1
2014 Archambault-Léger V, Lynd LR. Fluid mechanics relevant to flow through pretreatment of cellulosic biomass. Bioresource Technology. 157: 278-83. PMID 24566286 DOI: 10.1016/j.biortech.2014.01.035  1
2014 Laser M, Lynd LR. Comparative efficiency and driving range of light- and heavy-duty vehicles powered with biomass energy stored in liquid fuels or batteries. Proceedings of the National Academy of Sciences of the United States of America. 111: 3360-4. PMID 24550477 DOI: 10.1073/pnas.1314039111  1
2014 Biswas R, Prabhu S, Lynd LR, Guss AM. Increase in ethanol yield via elimination of lactate production in an ethanol-tolerant mutant of Clostridium thermocellum. Plos One. 9: e86389. PMID 24516531 DOI: 10.1371/journal.pone.0086389  1
2014 Reed PT, Izquierdo JA, Lynd LR. Cellulose fermentation by Clostridium thermocellum and a mixed consortium in an automated repetitive batch reactor. Bioresource Technology. 155: 50-6. PMID 24413481 DOI: 10.1016/j.biortech.2013.12.051  1
2014 Dykstra AB, St Brice L, Rodriguez M, Raman B, Izquierdo J, Cook KD, Lynd LR, Hettich RL. Development of a multipoint quantitation method to simultaneously measure enzymatic and structural components of the Clostridium thermocellum cellulosome protein complex. Journal of Proteome Research. 13: 692-701. PMID 24274857 DOI: 10.1021/pr400788e  1
2014 Bhandiwad A, Shaw AJ, Guss A, Guseva A, Bahl H, Lynd LR. Metabolic engineering of Thermoanaerobacterium saccharolyticum for n-butanol production. Metabolic Engineering. 21: 17-25. PMID 24216277 DOI: 10.1016/j.ymben.2013.10.012  1
2014 St Brice LA, Shao X, Izquierdo JA, Lynd LR. Optimization of affinity digestion for the isolation of cellulosomes from Clostridium thermocellum. Preparative Biochemistry & Biotechnology. 44: 206-16. PMID 24152105 DOI: 10.1080/10826068.2013.829494  1
2014 Deng Y, Olson DG, Zhou J, Herring CD, Joe Shaw A, Lynd LR. Corrigendum to Redirecting carbon flux through exogenous pyruvate kinase to achieve high ethanol yields in Clostridium thermocellum [Metab. Eng. 15 (2013) 151-158] Metabolic Engineering. 22: 1-2. DOI: 10.1016/j.ymben.2013.11.006  1
2013 Dumitrache A, Wolfaardt GM, Allen DG, Liss SN, Lynd LR. Tracking the cellulolytic activity of Clostridium thermocellum biofilms. Biotechnology For Biofuels. 6: 175. PMID 24286524 DOI: 10.1186/1754-6834-6-175  1
2013 Brown SD, Klingeman DM, Johnson CM, Clum A, Aerts A, Salamov A, Sharma A, Zane M, Barry K, Grigoriev IV, Davison BH, Lynd LR, Gilna P, Hau H, Hogsett DA, et al. Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives. Genome Announcements. 1. PMID 23792743 DOI: 10.1128/genomeA.00323-13  0.68
2013 van der Veen D, Lo J, Brown SD, Johnson CM, Tschaplinski TJ, Martin M, Engle NL, van den Berg RA, Argyros AD, Caiazza NC, Guss AM, Lynd LR. Characterization of Clostridium thermocellum strains with disrupted fermentation end-product pathways. Journal of Industrial Microbiology & Biotechnology. 40: 725-34. PMID 23645383 DOI: 10.1007/s10295-013-1275-5  1
2013 Holwerda EK, Ellis LD, Lynd LR. Development and evaluation of methods to infer biosynthesis and substrate consumption in cultures of cellulolytic microorganisms. Biotechnology and Bioengineering. 110: 2380-8. PMID 23568345 DOI: 10.1002/bit.24915  1
2013 Holwerda EK, Lynd LR. Testing alternative kinetic models for utilization of crystalline cellulose (Avicel) by batch cultures of Clostridium thermocellum. Biotechnology and Bioengineering. 110: 2389-94. PMID 23568291 DOI: 10.1002/bit.24914  1
2013 Currie DH, Herring CD, Guss AM, Olson DG, Hogsett DA, Lynd LR. Functional heterologous expression of an engineered full length CipA from Clostridium thermocellum in Thermoanaerobacterium saccharolyticum. Biotechnology For Biofuels. 6: 32. PMID 23448319 DOI: 10.1186/1754-6834-6-32  1
2013 Zhou J, Olson DG, Argyros DA, Deng Y, van Gulik WM, van Dijken JP, Lynd LR. Atypical glycolysis in Clostridium thermocellum. Applied and Environmental Microbiology. 79: 3000-8. PMID 23435896 DOI: 10.1128/AEM.04037-12  1
2013 Olson DG, Giannone RJ, Hettich RL, Lynd LR. Role of the CipA scaffoldin protein in cellulose solubilization, as determined by targeted gene deletion and complementation in Clostridium thermocellum. Journal of Bacteriology. 195: 733-9. PMID 23204466 DOI: 10.1128/JB.02014-12  1
2013 Deng Y, Olson DG, Zhou J, Herring CD, Joe Shaw A, Lynd LR. Redirecting carbon flux through exogenous pyruvate kinase to achieve high ethanol yields in Clostridium thermocellum. Metabolic Engineering. 15: 151-8. PMID 23202749 DOI: 10.1016/j.ymben.2012.11.006  1
2013 Dumitrache A, Wolfaardt G, Allen G, Liss SN, Lynd LR. Form and function of Clostridium thermocellum biofilms. Applied and Environmental Microbiology. 79: 231-9. PMID 23087042 DOI: 10.1128/AEM.02563-12  1
2013 Waller BH, Olson DG, Currie DH, Guss AM, Lynd LR. Exchange of type II dockerin-containing subunits of the Clostridium thermocellum cellulosome as revealed by SNAP-tags. Fems Microbiology Letters. 338: 46-53. PMID 23082914 DOI: 10.1111/1574-6968.12029  1
2013 Archambault-Léger V, Shao X, Lynd LR. Hot water flowthrough pretreatment of cellulosic biomass Fuels and Petrochemicals Division 2013 - Core Programming Area At the 2013 Aiche Annual Meeting: Global Challenges For Engineering a Sustainable Future. 303-304.  1
2012 Podkaminer KK, Guss AM, Trajano HL, Hogsett DA, Lynd LR. Characterization of xylan utilization and discovery of a new endoxylanase in Thermoanaerobacterium saccharolyticum through targeted gene deletions. Applied and Environmental Microbiology. 78: 8441-7. PMID 23023741 DOI: 10.1128/AEM.02130-12  1
2012 Mearls EB, Izquierdo JA, Lynd LR. Formation and characterization of non-growth states in Clostridium thermocellum: spores and L-forms. Bmc Microbiology. 12: 180. PMID 22897981 DOI: 10.1186/1471-2180-12-180  1
2012 Archambault-Leger V, Shao X, Lynd LR. Integrated analysis of hydrothermal flow through pretreatment. Biotechnology For Biofuels. 5: 49. PMID 22812930 DOI: 10.1186/1754-6834-5-49  1
2012 Podkaminer KK, Kenealy WR, Herring CD, Hogsett DA, Lynd LR. Ethanol and anaerobic conditions reversibly inhibit commercial cellulase activity in thermophilic simultaneous saccharification and fermentation (tSSF). Biotechnology For Biofuels. 5: 43. PMID 22703989 DOI: 10.1186/1754-6834-5-43  1
2012 Izquierdo JA, Goodwin L, Davenport KW, Teshima H, Bruce D, Detter C, Tapia R, Han S, Land M, Hauser L, Jeffries CD, Han J, Pitluck S, Nolan M, Chen A, ... ... Lynd LR, et al. Complete Genome Sequence of Clostridium clariflavum DSM 19732. Standards in Genomic Sciences. 6: 104-15. PMID 22675603 DOI: 10.4056/sigs.2535732  1
2012 Olson DG, Lynd LR. Transformation of Clostridium thermocellum by electroporation. Methods in Enzymology. 510: 317-30. PMID 22608734 DOI: 10.1016/B978-0-12-415931-0.00017-3  1
2012 Olson DG, Lynd LR. Computational design and characterization of a temperature-sensitive plasmid replicon for gram positive thermophiles. Journal of Biological Engineering. 6: 5. PMID 22578246 DOI: 10.1186/1754-1611-6-5  1
2012 Guss AM, Olson DG, Caiazza NC, Lynd LR. Dcm methylation is detrimental to plasmid transformation in Clostridium thermocellum. Biotechnology For Biofuels. 5: 30. PMID 22559230 DOI: 10.1186/1754-6834-5-30  1
2012 Holwerda EK, Hirst KD, Lynd LR. A defined growth medium with very low background carbon for culturing Clostridium thermocellum. Journal of Industrial Microbiology & Biotechnology. 39: 943-7. PMID 22350066 DOI: 10.1007/s10295-012-1091-3  1
2012 You C, Zhang XZ, Sathitsuksanoh N, Lynd LR, Zhang YH. Enhanced microbial utilization of recalcitrant cellulose by an ex vivo cellulosome-microbe complex. Applied and Environmental Microbiology. 78: 1437-44. PMID 22210210 DOI: 10.1128/AEM.07138-11  1
2012 Olson DG, McBride JE, Shaw AJ, Lynd LR. Recent progress in consolidated bioprocessing. Current Opinion in Biotechnology. 23: 396-405. PMID 22176748 DOI: 10.1016/j.copbio.2011.11.026  1
2012 Ellis LD, Holwerda EK, Hogsett D, Rogers S, Shao X, Tschaplinski T, Thorne P, Lynd LR. Closing the carbon balance for fermentation by Clostridium thermocellum (ATCC 27405). Bioresource Technology. 103: 293-9. PMID 22055095 DOI: 10.1016/j.biortech.2011.09.128  1
2012 Surendran Nair S, Kang S, Zhang X, Miguez FE, Izaurralde RC, Post WM, Dietze MC, Lynd LR, Wullschleger SD. Bioenergy crop models: Descriptions, data requirements, and future challenges Gcb Bioenergy. 4: 620-633. DOI: 10.1111/j.1757-1707.2012.01166.x  1
2011 Lynd LR, Aziz RA, de Brito Cruz CH, Chimphango AF, Cortez LA, Faaij A, Greene N, Keller M, Osseweijer P, Richard TL, Sheehan J, Chugh A, van der Wielen L, Woods J, van Zyl WH. A global conversation about energy from biomass: the continental conventions of the global sustainable bioenergy project. Interface Focus. 1: 271-9. PMID 22419984 DOI: 10.1098/rsfs.2010.0047  1
2011 Argyros DA, Tripathi SA, Barrett TF, Rogers SR, Feinberg LF, Olson DG, Foden JM, Miller BB, Lynd LR, Hogsett DA, Caiazza NC. High ethanol titers from cellulose by using metabolically engineered thermophilic, anaerobic microbes. Applied and Environmental Microbiology. 77: 8288-94. PMID 21965408 DOI: 10.1128/AEM.00646-11  1
2011 Shao X, Raman B, Zhu M, Mielenz JR, Brown SD, Guss AM, Lynd LR. Mutant selection and phenotypic and genetic characterization of ethanol-tolerant strains of Clostridium thermocellum. Applied Microbiology and Biotechnology. 92: 641-52. PMID 21874277 DOI: 10.1007/s00253-011-3492-z  1
2011 Brown SD, Guss AM, Karpinets TV, Parks JM, Smolin N, Yang S, Land ML, Klingeman DM, Bhandiwad A, Rodriguez M, Raman B, Shao X, Mielenz JR, Smith JC, Keller M, ... Lynd LR, et al. Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum. Proceedings of the National Academy of Sciences of the United States of America. 108: 13752-7. PMID 21825121 DOI: 10.1073/pnas.1102444108  1
2011 Lynd LR, Woods J. Perspective: A new hope for Africa. Nature. 474: S20-1. PMID 21697839 DOI: 10.1038/474S020a  1
2011 van Zyl JM, van Rensburg E, van Zyl WH, Harms TM, Lynd LR. A kinetic model for simultaneous saccharification and fermentation of Avicel with Saccharomyces cerevisiae. Biotechnology and Bioengineering. 108: 924-33. PMID 21404265 DOI: 10.1002/bit.23000  1
2011 Sizova MV, Izquierdo JA, Panikov NS, Lynd LR. Cellulose- and xylan-degrading thermophilic anaerobic bacteria from biocompost. Applied and Environmental Microbiology. 77: 2282-91. PMID 21317267 DOI: 10.1128/AEM.01219-10  1
2011 Podkaminer KK, Shao X, Hogsett DA, Lynd LR. Enzyme inactivation by ethanol and development of a kinetic model for thermophilic simultaneous saccharification and fermentation at 50 °C with Thermoanaerobacterium saccharolyticum ALK2. Biotechnology and Bioengineering. 108: 1268-78. PMID 21192004 DOI: 10.1002/bit.23050  1
2010 Lynd LR, Cruz CH. Make way for ethanol. Science (New York, N.Y.). 330: 1176. PMID 21109651 DOI: 10.1126/science.330.6008.1176-a  1
2010 Hemme CL, Mouttaki H, Lee YJ, Zhang G, Goodwin L, Lucas S, Copeland A, Lapidus A, Glavina del Rio T, Tice H, Saunders E, Brettin T, Detter JC, Han CS, Pitluck S, ... ... Lynd LR, et al. Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production. Journal of Bacteriology. 192: 6494-6. PMID 20889752 DOI: 10.1128/JB.01064-10  1
2010 Olson DG, Tripathi SA, Giannone RJ, Lo J, Caiazza NC, Hogsett DA, Hettich RL, Guss AM, Dubrovsky G, Lynd LR. Deletion of the Cel48S cellulase from Clostridium thermocellum. Proceedings of the National Academy of Sciences of the United States of America. 107: 17727-32. PMID 20837514 DOI: 10.1073/pnas.1003584107  1
2010 Tripathi SA, Olson DG, Argyros DA, Miller BB, Barrett TF, Murphy DM, McCool JD, Warner AK, Rajgarhia VB, Lynd LR, Hogsett DA, Caiazza NC. Development of pyrF-based genetic system for targeted gene deletion in Clostridium thermocellum and creation of a pta mutant. Applied and Environmental Microbiology. 76: 6591-9. PMID 20693441 DOI: 10.1128/AEM.01484-10  1
2010 Zhang J, Lynd LR. Ethanol production from paper sludge by simultaneous saccharification and co-fermentation using recombinant xylose-fermenting microorganisms. Biotechnology and Bioengineering. 107: 235-44. PMID 20506488 DOI: 10.1002/bit.22811  1
2010 Shaw AJ, Hogsett DA, Lynd LR. Natural competence in Thermoanaerobacter and Thermoanaerobacterium species. Applied and Environmental Microbiology. 76: 4713-9. PMID 20472726 DOI: 10.1128/AEM.00402-10  1
2010 Izquierdo JA, Sizova MV, Lynd LR. Diversity of bacteria and glycosyl hydrolase family 48 genes in cellulolytic consortia enriched from thermophilic biocompost. Applied and Environmental Microbiology. 76: 3545-53. PMID 20382819 DOI: 10.1128/AEM.02689-09  1
2010 Mandels M, Hontz L, Nystrom J, Lee R Lynd IB. Enzymatic hydrolysis of waste cellulose. Biotechnol Bioeng. Vol. XVI, pages 1471-93 (1974). Biotechnology and Bioengineering. 105: 3-25; discussion 1-2. PMID 19937801 DOI: 10.1002/bit.22603  1
2010 Wullschleger SD, Davis EB, Borsuk ME, Gunderson CA, Lynd LR. Biomass production in switchgrass across the United States: Database description and determinants of yield Agronomy Journal. 102: 1158-1168. DOI: 10.2134/agronj2010.0087  1
2010 Lynd LR. Bioenergy: In search of clarity Energy and Environmental Science. 3: 1150-1152. DOI: 10.1039/c002335n  1
2009 Shaw AJ, Hogsett DA, Lynd LR. Identification of the [FeFe]-hydrogenase responsible for hydrogen generation in Thermoanaerobacterium saccharolyticum and demonstration of increased ethanol yield via hydrogenase knockout. Journal of Bacteriology. 191: 6457-64. PMID 19648238 DOI: 10.1128/JB.00497-09  1
2009 Zhang J, Shao X, Lynd LR. Simultaneous saccharification and co-fermentation of paper sludge to ethanol by Saccharomyces cerevisiae RWB222. Part II: investigation of discrepancies between predicted and observed performance at high solids concentration. Biotechnology and Bioengineering. 104: 932-8. PMID 19575440 DOI: 10.1002/bit.22465  1
2009 Zhang J, Shao X, Townsend OV, Lynd LR. Simultaneous saccharification and co-fermentation of paper sludge to ethanol by Saccharomyces cerevisiae RWB222--Part I: kinetic modeling and parameters. Biotechnology and Bioengineering. 104: 920-31. PMID 19575439 DOI: 10.1002/bit.22464  1
2009 Zhang J, Heiss C, Thorne PG, Bal C, Azadi P, Lynd LR. Formation of ethyl β-xylopyranoside during simultaneous saccharification and co-fermentation of paper sludge Enzyme and Microbial Technology. 44: 196-202. DOI: 10.1016/j.enzmictec.2008.10.013  1
2009 Laser M, Larson E, Dale B, Wang M, Greene N, Lynd LR. Comparative analysis of efficiency, environmental impact, and process economics for mature biomass refining scenarios Biofuels, Bioproducts and Biorefining. 3: 247-270. DOI: 10.1002/bbb.136  1
2009 Lynd LR, Larson E, Greene N, Laser M, Sheehan J, Dale BE, McLaughlin S, Wang M. The role of biomass in America's energy future: Framing the analysis Biofuels, Bioproducts and Biorefining. 3: 113-123. DOI: 10.1002/bbb.134  1
2009 Laser M, Jin H, Jayawardhana K, Lynd LR. Coproduction of ethanonl and power from switchgrass Biofuels, Bioproducts and Biorefining. 3: 195-218. DOI: 10.1002/bbb.133  1
2009 Dale BE, Allen MS, Laser M, Lynd LR. Protein feeds coproduction in biomass conversion to fuels and chemicals Biofuels, Bioproducts and Biorefining. 3: 219-230. DOI: 10.1002/bbb.132  1
2009 Laser M, Jin H, Jayawardhana K, Dale BE, Lynd LR. Projected mature technology scenarios for conversion of cellulosic biomass to ethanol with coproduction thermochemical fuels, power, and/or animal feed protein Biofuels, Bioproducts and Biorefining. 3: 231-246. DOI: 10.1002/bbb.131  1
2009 Zhang YHP, Lynd LR. New Generation Biomass Conversion: Consolidated Bioprocessing Biomass Recalcitrance: Deconstructing the Plant Cell Wall For Bioenergy. 480-494. DOI: 10.1002/9781444305418.ch16  1
2009 Shaw AJ, Podkaminer KK, Desai SG, Bardsley JS, Rogers SR, Thorne PG, Hogsett DA, Lynd LR. Metabolic engineering of a thermophilic bacterium to produce ethanol at high yield International Sugar Journal. 111: 164-171.  1
2008 Shaw AJ, Podkaminer KK, Desai SG, Bardsley JS, Rogers SR, Thorne PG, Hogsett DA, Lynd LR. Metabolic engineering of a thermophilic bacterium to produce ethanol at high yield. Proceedings of the National Academy of Sciences of the United States of America. 105: 13769-74. PMID 18779592 DOI: 10.1073/pnas.0801266105  1
2008 Lynd LR, Laser MS, Bransby D, Dale BE, Davison B, Hamilton R, Himmel M, Keller M, McMillan JD, Sheehan J, Wyman CE. How biotech can transform biofuels. Nature Biotechnology. 26: 169-72. PMID 18259168 DOI: 10.1038/nbt0208-169  1
2008 Joe Shaw A, Jenney FE, Adams MWW, Lynd LR. End-product pathways in the xylose fermenting bacterium, Thermoanaerobacterium saccharolyticum Enzyme and Microbial Technology. 42: 453-458. DOI: 10.1016/j.enzmictec.2008.01.005  1
2008 Lynd LR. Energy biotechnology Current Opinion in Biotechnology. 19: 199-201. DOI: 10.1016/j.copbio.2008.05.005  1
2007 van Zyl WH, Lynd LR, den Haan R, McBride JE. Consolidated bioprocessing for bioethanol production using Saccharomyces cerevisiae. Advances in Biochemical Engineering/Biotechnology. 108: 205-35. PMID 17846725 DOI: 10.1007/10_2007_061  1
2007 Zhang YH, Ding SY, Mielenz JR, Cui JB, Elander RT, Laser M, Himmel ME, McMillan JR, Lynd LR. Fractionating recalcitrant lignocellulose at modest reaction conditions. Biotechnology and Bioengineering. 97: 214-23. PMID 17318910 DOI: 10.1002/bit.21386  1
2007 Den Haan R, Rose SH, Lynd LR, van Zyl WH. Hydrolysis and fermentation of amorphous cellulose by recombinant Saccharomyces cerevisiae. Metabolic Engineering. 9: 87-94. PMID 17112757 DOI: 10.1016/j.ymben.2006.08.005  1
2007 Fan Z, Lynd LR. Conversion of paper sludge to ethanol, II: process design and economic analysis. Bioprocess and Biosystems Engineering. 30: 35-45. PMID 17106699 DOI: 10.1007/s00449-006-0092-x  1
2007 Fan Z, Lynd LR. Conversion of paper sludge to ethanol. I: impact of feeding frequency and mixing energy characterization. Bioprocess and Biosystems Engineering. 30: 27-34. PMID 17093972 DOI: 10.1007/s00449-006-0091-y  1
2007 Anex RP, Lynd LR, Laser MS, Heggenstaller AH, Liebman M. Potential for enhanced nutrient cycling through coupling of agricultural and bioenergy systems Crop Science. 47: 1327-1335. DOI: 10.2135/cropsci2006.06.0406  1
2007 Den Haan R, Mcbride JE, Grange DCL, Lynd LR, Van Zyl WH. Functional expression of cellobiohydrolases in Saccharomyces cerevisiae towards one-step conversion of cellulose to ethanol Enzyme and Microbial Technology. 40: 1291-1299. DOI: 10.1016/j.enzmictec.2006.09.022  1
2007 Lynd LR, Laser MS, McBride J, Podkaminer K, Hannon J. Energy myth three-high land requirements and an unfavorable energy balance preclude biomass ethanol from playing a large role in providing energy services Energy and American Society - Thirteen Myths. 75-101. DOI: 10.1007/1-4020-5564-1_4  1
2007 Lynd LR. Thermophilic bacterium for biomass ethanol Industrial Bioprocessing. 29: 4.  1
2007 Hannon JR, Bakker A, Lynd LR, Wyman CE. Comparing the scale-up of aerobic and anaerobic biological processes 2007 Aiche Annual Meeting 1
2006 Lu Y, Zhang YH, Lynd LR. Enzyme-microbe synergy during cellulose hydrolysis by Clostridium thermocellum. Proceedings of the National Academy of Sciences of the United States of America. 103: 16165-9. PMID 17060624 DOI: 10.1073/pnas.0605381103  1
2006 Zhang YH, Lynd LR. A functionally based model for hydrolysis of cellulose by fungal cellulase. Biotechnology and Bioengineering. 94: 888-98. PMID 16685742 DOI: 10.1002/bit.20906  1
2006 Zhang YH, Cui J, Lynd LR, Kuang LR. A transition from cellulose swelling to cellulose dissolution by o-phosphoric acid: evidence from enzymatic hydrolysis and supramolecular structure. Biomacromolecules. 7: 644-8. PMID 16471942 DOI: 10.1021/bm050799c  1
2006 Zhang YHP, Lynd LR. Biosynthesis of radiolabeled cellodextrins by the Clostridium thermocellum cellobiose and cellodextrin phosphorylases for measurement of intracellular sugars Applied Microbiology and Biotechnology. 70: 123-129. PMID 16402169 DOI: 10.1007/s00253-005-0278-1  1
2006 Tyurin MV, Lynd LR, Wiegel J. 13 Gene Transfer Systems for Obligately Anaerobic Thermophilic Bacteria Methods in Microbiology. 35: 309-330. DOI: 10.1016/S0580-9517(08)70016-3  1
2006 Zhang YHP, Lynd LR. Novel lignocellulose fractionation featuring modest reaction conditions and reagent recycling Acs National Meeting Book of Abstracts. 231.  1
2006 Kim S, Dale BE, Laser M, Lynd LR. Life cycle assessment of integrated biorefinery: Corn grain, corn stover and switchgrass Aiche Annual Meeting, Conference Proceedings 1
2006 Laser M, Sokhansanj S, Bransby D, Martin RL, Jin H, Lynd LR, Larson ED, Dale BE. Considering advanced biorefineries in context Aiche Annual Meeting, Conference Proceedings 1
2005 Tyurin MV, Sullivan CR, Lynd LR. Role of spontaneous current oscillations during high-efficiency electrotransformation of thermophilic anaerobes. Applied and Environmental Microbiology. 71: 8069-76. PMID 16332787 DOI: 10.1128/AEM.71.12.8069-8076.2005  1
2005 Lynd LR, van Zyl WH, McBride JE, Laser M. Consolidated bioprocessing of cellulosic biomass: an update. Current Opinion in Biotechnology. 16: 577-83. PMID 16154338 DOI: 10.1016/j.copbio.2005.08.009  1
2005 Fan Z, McBride JE, van Zyl WH, Lynd LR. Theoretical analysis of selection-based strain improvement for microorganisms with growth dependent upon extracytoplasmic enzymes. Biotechnology and Bioengineering. 92: 35-44. PMID 16136587 DOI: 10.1002/bit.20576  1
2005 Zhang YH, Lynd LR. Cellulose utilization by Clostridium thermocellum: bioenergetics and hydrolysis product assimilation. Proceedings of the National Academy of Sciences of the United States of America. 102: 7321-5. PMID 15883376 DOI: 10.1073/pnas.0408734102  1
2005 Zhang YH, Lynd LR. Determination of the number-average degree of polymerization of cellodextrins and cellulose with application to enzymatic hydrolysis. Biomacromolecules. 6: 1510-5. PMID 15877372 DOI: 10.1021/bm049235j  1
2005 Zhang YH, Lynd LR. Regulation of cellulase synthesis in batch and continuous cultures of Clostridium thermocellum. Journal of Bacteriology. 187: 99-106. PMID 15601693 DOI: 10.1128/JB.187.1.99-106.2005  1
2005 Shaw IV AJ, Martin RL, Desai SG, Tyurin M, Lynd LR. Metabolic engineering of the xylose utilizing thermophile thermoanaerobacterium saccharolyticum Jw/Sl-Ys485 for ethanol production Aiche Annual Meeting, Conference Proceedings. 8400.  1
2005 Newton ED, Dale B, Kim S, Alizadeh H, Lynd LR, Laser M. Recent process improvements for the afex process and resulting processing cost reductions Aiche Annual Meeting Conference Proceedings. 2005.  1
2005 Laser M, Jin H, Jayawardhana K, Lynd LR, Larson ED, Celik F, Dale B. Mature technology biorefinery scenarios emphasizing fuels and power Aiche Annual Meeting, Conference Proceedings. 12093.  1
2004 Ozkan M, Yilmaz EI, Lynd LR, Ozcengiz G. Cloning and expression of the Clostridium thermocellum L-lactate dehydrogenase gene in Escherichia coli and enzyme characterization. Canadian Journal of Microbiology. 50: 845-51. PMID 15644899 DOI: 10.1139/w04-071  1
2004 Zhang YH, Lynd LR. Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems. Biotechnology and Bioengineering. 88: 797-824. PMID 15538721 DOI: 10.1002/bit.20282  1
2004 Jeffries TW, Lynd LR. Introduction to microbial catalysis and engineering. Applied Biochemistry and Biotechnology. 113: 323-4. PMID 15241866  1
2004 Desai SG, Guerinot ML, Lynd LR. Cloning of L-lactate dehydrogenase and elimination of lactic acid production via gene knockout in Thermoanaerobacterium saccharolyticum JW/SL-YS485. Applied Microbiology and Biotechnology. 65: 600-5. PMID 15007569 DOI: 10.1007/s00253-004-1575-9  1
2004 Zhang YH, Lynd LR. Kinetics and relative importance of phosphorolytic and hydrolytic cleavage of cellodextrins and cellobiose in cell extracts of Clostridium thermocellum. Applied and Environmental Microbiology. 70: 1563-9. PMID 15006779 DOI: 10.1128/AEM.70.3.1563-1569.2004  1
2004 Tyurin MV, Desai SG, Lynd LR. Electrotransformation of Clostridium thermocellum. Applied and Environmental Microbiology. 70: 883-90. PMID 14766568 DOI: 10.1128/AEM.70.2.883-890.2004  1
2004 Lynd LR, Wang MQ. A product-nonspecific framework for evaluating the potential of biomass-based products to displace fossil fuels Journal of Industrial Ecology. 7: 17-32. DOI: 10.1162/108819803323059370  1
2004 Lynd LR. Biomass refining in response to sustainability and security challenges Aiche Annual Meeting, Conference Proceedings. 9981.  1
2004 Lynd LR. Ethanol from paper mill waste Industrial Bioprocessing. 26: 7.  1
2004 Lynd LR. Consolidated bioprocessing for cellulosic biomass Industrial Bioprocessing. 26: 4.  1
2004 Jeffries TW, Lynd LR. Introduction to microbial catalysis and engineering Applied Biochemistry and Biotechnology - Part a Enzyme Engineering and Biotechnology. 114: 323-324.  1
2003 Fan Z, South C, Lyford K, Munsie J, van Walsum P, Lynd LR. Conversion of paper sludge to ethanol in a semicontinuous solids-fed reactor. Bioprocess and Biosystems Engineering. 26: 93-101. PMID 14615931 DOI: 10.1007/s00449-003-0337-x  1
2003 Zhang YH, Lynd LR. Cellodextrin preparation by mixed-acid hydrolysis and chromatographic separation. Analytical Biochemistry. 322: 225-32. PMID 14596831 DOI: 10.1016/j.ab.2003.07.021  1
2003 Zhang Y, Lynd LR. Quantification of cell and cellulase mass concentrations during anaerobic cellulose fermentation: development of an enzyme-linked immunosorbent assay-based method with application to Clostridium thermocellum batch cultures. Analytical Chemistry. 75: 219-27. PMID 12553755 DOI: 10.1021/ac020271n  1
2003 Lynd LR, Von Blottnltz H, Tait B, De Boer J, Pretorius IS, Rumbold K, Van Zyl WH. Converting plant biomass to fuels and commodity chemicals in South Africa: A third chapter? South African Journal of Science. 99: 499-507.  1
2002 Lynd LR, Weimer PJ, van Zyl WH, Pretorius IS. Microbial cellulose utilization: fundamentals and biotechnology. Microbiology and Molecular Biology Reviews : Mmbr. 66: 506-77, table of con. PMID 12209002 DOI: 10.1128/MMBR.66.3.506-577.2002  1
2002 McLaughlin SB, De La Torre Ugarte DG, Garten CT, Lynd LR, Sanderson MA, Tolbert VR, Wolf DD. High-value renewable energy from prairie grasses Environmental Science and Technology. 36: 2122-2129. PMID 12038820 DOI: 10.1021/es010963d  1
2002 Lynd LR, Zhang Y. Quantitative determination of cellulase concentration as distinct from cell concentration in studies of microbial cellulose utilization: analytical framework and methodological approach. Biotechnology and Bioengineering. 77: 467-75. PMID 11787020 DOI: 10.1002/bit.10142  1
2002 Laser M, Schulman D, Allen SG, Lichwa J, Antal MJ, Lynd LR. A comparison of liquid hot water and steam pretreatments of sugar cane bagasse for bioconversion to ethanol. Bioresource Technology. 81: 33-44. PMID 11708754 DOI: 10.1016/S0960-8524(01)00103-1  1
2001 Ozkan M, Desai SG, Zhang Y, Stevenson DM, Beane J, White EA, Guerinot ML, Lynd LR. Characterization of 13 newly isolated strains of anaerobic, cellulolytic, thermophilic bacteria. Journal of Industrial Microbiology & Biotechnology. 27: 275-80. PMID 11781801 DOI: 10.1038/sj/jim/7000082  1
2001 Lynd LR, Baskaran S, Casten S. Salt accumulation resulting from base added for pH control, and not ethanol, limits growth of Thermoanaerobacteriumthermosaccharolyticum HG-8 at elevated feed xylose concentrations in continuous culture. Biotechnology Progress. 17: 118-25. PMID 11170489 DOI: 10.1021/bp000158n  1
2001 Lynd LR, Lyford K, Levenson K, South CR, Van Walsum GP. Evaluation of paper sludges for amenability to enzymatic hydrolysis and conversion to ethanol Appita Journal. 54: 314.  1
2001 Allen SG, Schulman D, Lichwa J, Antal MJ, Laser M, Lynd LR. A comparison between hot liquid water and steam fractionation of corn fiber Industrial and Engineering Chemistry Research. 40: 2934-2941.  1
1999 Lynd LR, Wyman CE, Gerngross TU. Biocommodity engineering Biotechnology Progress. 15: 777-793. DOI: 10.1021/bp990109e  1
1998 Van Walsum GP, Lynd LR. Allocation of ATP to synthesis of cells and hydrolytic enzymes in cellulolytic fermentative microorganisms: Bioenergetics, kinetics, and bioprocessing Biotechnology and Bioengineering. 58: 316-320. PMID 10191409 DOI: 10.1002/(SICI)1097-0290(19980420)58:2/3<316::AID-BIT31>3.0.CO;2-7  1
1998 Ozcengiz G, Kim JH, Lin WR, Ozcengiz E, Westenberg D, Lynd LR, Demain AL. Superiority of the PCR-based approach for cloning the acetate kinase gene of Clostridium thermocellum Journal of Industrial Microbiology and Biotechnology. 21: 145-149. DOI: 10.1038/sj.jim.2900567  1
1996 Klapatch TR, Demain AL, Lynd LR. Restriction endonuclease activity in Clostridium thermocellum and Clostridium thermosaccharolyticum Applied Microbiology and Biotechnology. 45: 127-131. PMID 11536742 DOI: 10.1007/s002530050659  1
1996 Klapatch TR, Guerinot ML, Lynd LR. Electrotransformation of Clostridium thermosaccharolyticum Journal of Industrial Microbiology. 16: 342-347. PMID 8987491  1
1996 Ahn HJ, Lynd LR. Cellulose degradation and ethanol production by thermophilic bacteria using mineral growth medium Applied Biochemistry and Biotechnology - Part a Enzyme Engineering and Biotechnology. 57: 599-604. PMID 8669915  1
1996 Demain AL, Klapatch TR, Jung KH, Lynd LR. Recombinant DNA technology in development of an economical conversion of waste to liquid fuel Annals of the New York Academy of Sciences. 782: 402-412. DOI: 10.1111/j.1749-6632.1996.tb40578.x  1
1996 Lynd LR. Overview and evaluation of fuel ethanol from cellulosic biomass: Technology, economics, the environment, and policy Annual Review of Energy and the Environment. 21: 403-465.  1
1996 Garant H, Lynd LR. Perchloroethylene utilization by methanogenic fed-batch cultures: Acclimation and degradation Applied Biochemistry and Biotechnology - Part a Enzyme Engineering and Biotechnology. 57: 895-904.  1
1996 Lynd LR, Elander RT, Wyman CE. Likely features and costs of mature biomass ethanol technology Applied Biochemistry and Biotechnology - Part a Enzyme Engineering and Biotechnology. 57: 741-761.  1
1996 Van Walsum GP, Allen SG, Spencer MJ, Laser MS, Antal MJ, Lynd LR. Conversion of lignocellulosics pretreated with liquid hot water to ethanol Applied Biochemistry and Biotechnology - Part a Enzyme Engineering and Biotechnology. 57: 157-170.  1
1995 South CR, Hogsett DAL, Lynd LR. Modeling simultaneous saccharification and fermentation of lignocellulose to ethanol in batch and continuous reactors Enzyme and Microbial Technology. 17: 797-803. DOI: 10.1016/0141-0229(94)00016-K  1
1995 Stone K, Lynd LR. Analysis of internal and external energy flows associated with projected process improvements in biomass ethanol production Applied Biochemistry and Biotechnology. 51: 569-584. DOI: 10.1007/BF02933459  1
1995 Baskaran S, Hogsett DAL, Lynd LR. Optimization of a chemically defined, minimal medium for Clostridium thermosaccharolyticum Applied Biochemistry and Biotechnology. 51: 399-411. DOI: 10.1007/BF02933443  1
1995 Baskaran S, Ahn HJ, Lynd LR. Investigation of the ethanol tolerance of Clostridium thermosaccharolyticum in continuous culture Biotechnology Progress. 11: 276-281.  1
1994 South CR, Lynd LR. Analysis of conversion of particulate biomass to ethanol in continuous solids retaining and cascade bioreactors Applied Biochemistry and Biotechnology. 45: 467-481. DOI: 10.1007/BF02941822  1
1994 Klapatch TR, Hogsett DAL, Baskaran S, Pal S, Lynd LR. Organism development and characterization for ethanol production using thermophilic bacteria Applied Biochemistry and Biotechnology. 45: 209-223. DOI: 10.1007/BF02941800  1
1994 Bernardez TD, Lyford KA, Lynd LR. Kinetics of the extracellular cellulases of Clostridium thermocellum acting on pretreated mixed hardwood and Avicel Applied Microbiology and Biotechnology. 41: 620-625. DOI: 10.1007/BF00178500  1
1993 Hill PW, Klapatch TR, Lynd LR. Bioenergetics and end-product regulation of Clostridium thermosaccharolyticum in response to nutrient limitation. Biotechnology and Bioengineering. 42: 873-83. PMID 18613135 DOI: 10.1002/bit.260420712  1
1993 South CR, Hogsett DA, Lynd LR. Continuous fermentation of cellulosic biomass to ethanol Applied Biochemistry and Biotechnology. 39: 587-600. DOI: 10.1007/BF02919020  1
1993 Lynd LR, Goodman BJ. Introduction to session 4 - Bioengineering research Applied Biochemistry and Biotechnology. 39: 385. DOI: 10.1007/BF02919004  1
1993 Bernardez TD, Lyford K, Hogsett DA, Lynd LR. Adsorption of Clostridium thermocellum cellulases onto pretreated mixed hardwood, Avicel, and lignin Biotechnology and Bioengineering. 42: 899-907.  1
1992 Hogsett DA, Ahn HJ, Bernardez TD, South R, Lynd LR. Direct microbial conversion - Prospects, progress, and obstacles Applied Biochemistry and Biotechnology. 34: 527-541. DOI: 10.1007/BF02920576  1
1992 Busche RM, Scott CD, Davison BH, Lynd LR. Ethanol, the ultimate feedstock - A technoeconomic evaluation of ethanol manufacture in fluidized bed bioreactors operating with immobilized cells Applied Biochemistry and Biotechnology. 34: 395-417. DOI: 10.1007/BF02920564  1
1992 Clancy PB, Venkataraman N, Lynd LR. Biochemical inhibition of sulfate reduction in batch and continuous anaerobic digesters Water Science and Technology. 25: 51-60.  1
1992 Lynd LR, Ahn HJ, Hogsett DA, South CR. Advanced concepts for cellulose conversion Proceedings - Society of Automotive Engineers. 751-758.  1
1991 Lynd LR, Ahn HJ, Anderson G, Hill P, Sean Kersey D, Klapatch T. Thermophilic ethanol production investigation of ethanol yield and tolerance in continuous culture Applied Biochemistry and Biotechnology. 28: 549-570. DOI: 10.1007/BF02922633  1
1991 Lynd LR, Cushman JH, Nichols RJ, Wyman CE. Fuel ethanol from cellulosic biomass Science. 251: 1318-1323.  1
1990 Lynd LR. Large-scale fuel ethanol from lignocellulose - Potential, economics, and research priorities Applied Biochemistry and Biotechnology. 24: 695-719. DOI: 10.1007/BF02920289  1
1989 Torres JL, Grethlein HE, Lynd LR. Computer simulation of the dartmouth process for separation of dilute Ethanol/Water mixtures Applied Biochemistry and Biotechnology. 20: 621-633. DOI: 10.1007/BF02936513  1
1989 Lynd LR, Grethlein HE, Wolkin RH. Fermentation of cellulosic substrates in batch and continuous culture by Clostridium thermocellum Applied and Environmental Microbiology. 55: 3131-3139.  1
1987 Lynd LR, Grethlein HE. Hydrolysis of dilute acid pretreated mixed hardwood and purified microcrystalline cellulose by cell-free broth from Clostridium thermocellum Biotechnology and Bioengineering. 29: 92-100.  1
1986 Lynd LR, Grethlein HE. DISTILLATION WITH INTERMEDIATE HEAT PUMPS AND OPTIMAL SIDESTREAM RETURN Aiche Journal. 32: 1347-1359.  1
Show low-probability matches.