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Evert K. Holwerda, Ph.D. - Publications

Affiliations: 
2014 Engineering Dartmouth College, Hanover, NH, United States 
Area:
Microbiology Biology, Alternative Energy, General Engineering
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26/26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Chirania P, Holwerda EK, Giannone RJ, Liang X, Poudel S, Ellis JC, Bomble YJ, Hettich RL, Lynd LR. Metaproteomics reveals enzymatic strategies deployed by anaerobic microbiomes to maintain lignocellulose deconstruction at high solids. Nature Communications. 13: 3870. PMID 35790765 DOI: 10.1038/s41467-022-31433-x  0.515
2022 Kubis MR, Holwerda EK, Lynd LR. Declining carbohydrate solubilization with increasing solids loading during fermentation of cellulosic feedstocks by Clostridium thermocellum: documentation and diagnostic tests. Biotechnology For Biofuels and Bioproducts. 15: 12. PMID 35418299 DOI: 10.1186/s13068-022-02110-4  0.53
2021 Mazzoli R, Olson DG, Concu AM, Holwerda EK, Lynd LR. In vivo evolution of lactic acid hyper-tolerant Clostridium thermocellum. New Biotechnology. 67: 12-22. PMID 34915174 DOI: 10.1016/j.nbt.2021.12.003  0.546
2021 Yayo J, Kuil T, Olson DG, Lynd LR, Holwerda EK, van Maris AJA. Laboratory evolution and reverse engineering of for growth on glucose and fructose. Applied and Environmental Microbiology. PMID 33608285 DOI: 10.1128/AEM.03017-20  0.514
2020 Holwerda EK, Zhou J, Hon S, Stevenson DM, Amador-Noguez D, Lynd LR, van Dijken JP. Metabolic fluxes of nitrogen and pyrophosphate in chemostat cultures of and . Applied and Environmental Microbiology. PMID 32978139 DOI: 10.1128/AEM.01795-20  0.54
2020 Holwerda EK, Olson DG, Ruppertsberger NM, Stevenson DM, Murphy SJL, Maloney MI, Lanahan AA, Amador-Noguez D, Lynd LR. Metabolic and evolutionary responses of to genetic interventions aimed at improving ethanol production. Biotechnology For Biofuels. 13: 40. PMID 32175007 DOI: 10.1186/S13068-020-01680-5  0.562
2020 Balch ML, Chamberlain MB, Worthen RS, Holwerda EK, Lynd LR. Fermentation with continuous ball milling: Effectiveness at enhancing solubilization for several cellulosic feedstocks and comparative tolerance of several microorganisms Biomass and Bioenergy. 134: 105468. DOI: 10.1016/J.Biombioe.2020.105468  0.592
2019 Holwerda EK, Worthen RS, Kothari N, Lasky RC, Davison BH, Fu C, Wang ZY, Dixon RA, Biswal AK, Mohnen D, Nelson RS, Baxter HL, Mazarei M, Stewart CN, Muchero W, et al. Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass. Biotechnology For Biofuels. 12: 25. PMID 30774713 DOI: 10.1186/S13068-019-1363-5  0.477
2019 Holwerda EK, Worthen RS, Kothari N, Lasky RC, Davison BH, Fu C, Wang ZY, Dixon RA, Biswal AK, Mohnen D, Nelson RS, Baxter HL, Mazarei M, Muchero W, Tuskan GA, et al. Multiple levers for overcoming the recalcitrance of lignocellulosic biomass. Biotechnology For Biofuels. 12: 15. PMID 30675183 DOI: 10.1186/S13068-019-1353-7  0.541
2018 Ghosh S, Holwerda EK, Worthen RS, Lynd LR, Epps BP. Rheological properties of corn stover slurries during fermentation by . Biotechnology For Biofuels. 11: 246. PMID 30202441 DOI: 10.1186/S13068-018-1248-Z  0.549
2018 Liang X, Whitham JM, Holwerda EK, Shao X, Tian L, Wu YW, Lombard V, Henrissat B, Klingeman DM, Yang ZK, Podar M, Richard TL, Elkins JG, Brown SD, Lynd LR. Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times. Biotechnology For Biofuels. 11: 243. PMID 30202438 DOI: 10.1186/S13068-018-1238-1  0.672
2018 Hon S, Holwerda EK, Worthen RS, Maloney MI, Tian L, Cui J, Lin PP, Lynd LR, Olson DG. Expressing the in engineered improves ethanol production. Biotechnology For Biofuels. 11: 242. PMID 30202437 DOI: 10.1186/S13068-018-1245-2  0.595
2018 Kothari N, Holwerda EK, Cai CM, Kumar R, Wyman CE. Biomass augmentation through thermochemical pretreatments greatly enhances digestion of switchgrass by . Biotechnology For Biofuels. 11: 219. PMID 30087696 DOI: 10.1186/S13068-018-1216-7  0.449
2017 Bomble YJ, Lin CY, Amore A, Wei H, Holwerda EK, Ciesielski PN, Donohoe BS, Decker SR, Lynd LR, Himmel ME. Lignocellulose deconstruction in the biosphere. Current Opinion in Chemical Biology. 41: 61-70. PMID 29100023 DOI: 10.1016/J.Cbpa.2017.10.013  0.558
2017 Hon S, Olson DG, Holwerda EK, Lanahan AA, Jean-Loup Murphy S, Maloney MI, Zheng T, Papanek B, Guss AM, Lynd LR. The ethanol pathway from Thermoanaerobacterium saccharolyticum improves ethanol production in Clostridium thermocellum. Metabolic Engineering. PMID 28663138 DOI: 10.1016/J.Ymben.2017.06.011  0.592
2017 Dash S, Khodayari A, Zhou J, Holwerda EK, Olson DG, Lynd LR, Maranas CD. Development of a core Clostridium thermocellum kinetic metabolic model consistent with multiple genetic perturbations. Biotechnology For Biofuels. 10: 108. PMID 28469704 DOI: 10.1186/S13068-017-0792-2  0.537
2017 Rydzak T, Garcia D, Stevenson DM, Sladek M, Klingeman DM, Holwerda EK, Amador-Noguez D, Brown SD, Guss AM. Deletion of Type I glutamine synthetase deregulates nitrogen metabolism and increases ethanol production in Clostridium thermocellum. Metabolic Engineering. PMID 28400329 DOI: 10.1016/J.Ymben.2017.04.002  0.412
2017 Balch ML, Holwerda EK, Davis MF, Sykes RW, Happs RM, Kumar R, Wyman CE, Lynd LR. Lignocellulose fermentation and residual solids characterization for senescent switchgrass fermentation by Clostridium thermocellum in the presence and absence of continuous in situ ball-milling Energy & Environmental Science. 10: 1252-1261. DOI: 10.1039/C6Ee03748H  0.604
2016 Tian L, Papanek B, Olson DG, Rydzak T, Holwerda EK, Zheng T, Zhou J, Maloney M, Jiang N, Giannone RJ, Hettich RL, Guss AM, Lynd LR. Simultaneous achievement of high ethanol yield and titer in Clostridium thermocellum. Biotechnology For Biofuels. 9: 116. PMID 27257435 DOI: 10.1186/S13068-016-0528-8  0.618
2016 Beri D, Olson DG, Holwerda EK, Lynd LR. Nicotinamide cofactor ratios in engineered strains of Clostridium thermocellum and Thermoanaerobacterium saccharolyticum. Fems Microbiology Letters. 363. PMID 27190292 DOI: 10.1093/Femsle/Fnw091  0.613
2015 Sand A, Holwerda EK, Ruppertsberger NM, Maloney M, Olson DG, Nataf Y, Borovok I, Sonenshein AL, Bayer EA, Lamed R, Lynd LR, Shoham Y. Three cellulosomal xylanase genes in Clostridium thermocellum are regulated by both vegetative SigA (σ(A)) and alternative SigI6 (σ(I6)) factors. Febs Letters. 589: 3133-40. PMID 26320414 DOI: 10.1016/J.Febslet.2015.08.026  0.493
2014 Holwerda EK, Thorne PG, Olson DG, Amador-Noguez D, Engle NL, Tschaplinski TJ, van Dijken JP, Lynd LR. The exometabolome of Clostridium thermocellum reveals overflow metabolism at high cellulose loading. Biotechnology For Biofuels. 7: 155. PMID 25379055 DOI: 10.1186/S13068-014-0155-1  0.569
2013 Holwerda EK, Ellis LD, Lynd LR. Development and evaluation of methods to infer biosynthesis and substrate consumption in cultures of cellulolytic microorganisms. Biotechnology and Bioengineering. 110: 2380-8. PMID 23568345 DOI: 10.1002/Bit.24915  0.578
2013 Holwerda EK, Lynd LR. Testing alternative kinetic models for utilization of crystalline cellulose (Avicel) by batch cultures of Clostridium thermocellum. Biotechnology and Bioengineering. 110: 2389-94. PMID 23568291 DOI: 10.1002/Bit.24914  0.583
2012 Holwerda EK, Hirst KD, Lynd LR. A defined growth medium with very low background carbon for culturing Clostridium thermocellum. Journal of Industrial Microbiology & Biotechnology. 39: 943-7. PMID 22350066 DOI: 10.1007/S10295-012-1091-3  0.583
2012 Ellis LD, Holwerda EK, Hogsett D, Rogers S, Shao X, Tschaplinski T, Thorne P, Lynd LR. Closing the carbon balance for fermentation by Clostridium thermocellum (ATCC 27405). Bioresource Technology. 103: 293-9. PMID 22055095 DOI: 10.1016/J.Biortech.2011.09.128  0.679
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