Aimee M. Dudley - Publications

Molecular and Cellular Biology University of Washington, Seattle, Seattle, WA 
Molecular Biology, Genetics, Microbiology Biology

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Sakhanenko NA, Cromie GA, Dudley AM, Galas DJ. Computational Inference Software for Tetrad Assembly from Randomly Arrayed Yeast Colonies. G3 (Bethesda, Md.). PMID 31109921 DOI: 10.1534/g3.119.400166  0.4
2019 Forche A, Solis NV, Swidergall M, Thomas R, Guyer A, Beach A, Cromie GA, Le GT, Lowell E, Pavelka N, Berman J, Dudley AM, Selmecki A, Filler SG. Selection of Candida albicans trisomy during oropharyngeal infection results in a commensal-like phenotype. Plos Genetics. 15: e1008137. PMID 31091232 DOI: 10.1371/journal.pgen.1008137  0.4
2019 Fay JC, Liu P, Ong GT, Dunham MJ, Cromie GA, Jeffery EW, Ludlow CL, Dudley AM. A polyploid admixed origin of beer yeasts derived from European and Asian wine populations. Plos Biology. 17: e3000147. PMID 30835725 DOI: 10.1371/journal.pbio.3000147  0.4
2017 Sirr A, Scott AC, Cromie GA, Ludlow CL, Ahyong V, Morgan TS, Gilbert T, Dudley AM. Natural Variation in SER1 and ENA6 Underlie Condition-Specific Growth Defects in Saccharomyces cerevisiae. G3 (Bethesda, Md.). PMID 29138237 DOI: 10.1534/g3.117.300392  0.4
2017 Cromie GA, Tan Z, Hays M, Sirr A, Jeffery EW, Dudley AM. Transcriptional Profiling of Biofilm Regulators Identified by an Overexpression Screen in Saccharomyces cerevisiae. G3 (Bethesda, Md.). PMID 28673928 DOI: 10.1534/g3.117.042440  0.4
2016 Cromie GA, Tan Z, Hays M, Jeffery EW, Dudley AM. Dissecting Gene Expression Changes Accompanying a Ploidy-Based Phenotypic Switch. G3 (Bethesda, Md.). PMID 27836908 DOI: 10.1534/g3.116.036160  0.4
2016 Ludlow CL, Cromie GA, Garmendia-Torres C, Sirr A, Hays M, Field C, Jeffery EW, Fay JC, Dudley AM. Independent Origins of Yeast Associated with Coffee and Cacao Fermentation. Current Biology : Cb. 26: 965-971. PMID 27020745 DOI: 10.1016/j.cub.2016.02.012  0.32
2015 Cary GA, Vinh DB, May P, Kuestner R, Dudley AM. Proteomic Analysis of Dhh1 Complexes Reveals a Role for Hsp40 Chaperone Ydj1 in Yeast P-Body Assembly. G3 (Bethesda, Md.). 5: 2497-511. PMID 26392412 DOI: 10.1534/g3.115.021444  0.32
2015 Cromie GA, Dudley AM. Aneuploidy: Tolerating Tolerance. Current Biology : Cb. 25: R771-3. PMID 26325142 DOI: 10.1016/j.cub.2015.06.056  0.32
2015 Sirr A, Cromie GA, Jeffery EW, Gilbert TL, Ludlow CL, Scott AC, Dudley AM. Allelic variation, aneuploidy, and nongenetic mechanisms suppress a monogenic trait in yeast. Genetics. 199: 247-62. PMID 25398792 DOI: 10.1534/genetics.114.170563  0.32
2014 Garmendia-Torres C, Skupin A, Michael SA, Ruusuvuori P, Kuwada NJ, Falconnet D, Cary GA, Hansen C, Wiggins PA, Dudley AM. Unidirectional P-body transport during the yeast cell cycle. Plos One. 9: e99428. PMID 24918601 DOI: 10.1371/journal.pone.0099428  0.32
2014 Scott AC, Ludlow CL, Cromie GA, Dudley AM. BEST: barcode enabled sequencing of tetrads. Journal of Visualized Experiments : Jove. PMID 24836713 DOI: 10.3791/51401  0.32
2014 Cary GA, Yoon SH, Torres CG, Wang K, Hays M, Ludlow C, Goodlett DR, Dudley AM. Identification and characterization of a drug-sensitive strain enables puromycin-based translational assays in Saccharomyces cerevisiae. Yeast (Chichester, England). 31: 167-78. PMID 24610064 DOI: 10.1002/yea.3007  0.32
2014 Ruusuvuori P, Lin J, Scott AC, Tan Z, Sorsa S, Kallio A, Nykter M, Yli-Harja O, Shmulevich I, Dudley AM. Quantitative analysis of colony morphology in yeast. Biotechniques. 56: 18-27. PMID 24447135 DOI: 10.2144/000114123  0.32
2013 Lin J, Kreisberg R, Kallio A, Dudley AM, Nykter M, Shmulevich I, May P, Autio R. POMO--Plotting Omics analysis results for Multiple Organisms. Bmc Genomics. 14: 918. PMID 24365393 DOI: 10.1186/1471-2164-14-918  0.32
2013 Cromie GA, Hyma KE, Ludlow CL, Garmendia-Torres C, Gilbert TL, May P, Huang AA, Dudley AM, Fay JC. Genomic sequence diversity and population structure of Saccharomyces cerevisiae assessed by RAD-seq. G3 (Bethesda, Md.). 3: 2163-71. PMID 24122055 DOI: 10.1534/g3.113.007492  0.32
2013 Tan Z, Hays M, Cromie GA, Jeffery EW, Scott AC, Ahyong V, Sirr A, Skupin A, Dudley AM. Aneuploidy underlies a multicellular phenotypic switch. Proceedings of the National Academy of Sciences of the United States of America. 110: 12367-72. PMID 23812752 DOI: 10.1073/pnas.1301047110  0.32
2013 Ludlow CL, Scott AC, Cromie GA, Jeffery EW, Sirr A, May P, Lin J, Gilbert TL, Hays M, Dudley AM. High-throughput tetrad analysis. Nature Methods. 10: 671-5. PMID 23666411 DOI: 10.1038/nmeth.2479  0.32
2011 Nadeau JH, Dudley AM. Genetics. Systems genetics. Science (New York, N.Y.). 331: 1015-6. PMID 21350153 DOI: 10.1126/science.1203869  0.32
2010 Sípová H, Zhang S, Dudley AM, Galas D, Wang K, Homola J. Surface plasmon resonance biosensor for rapid label-free detection of microribonucleic acid at subfemtomole level. Analytical Chemistry. 82: 10110-5. PMID 21090631 DOI: 10.1021/ac102131s  0.32
2010 Ruusuvuori P, Aijö T, Chowdhury S, Garmendia-Torres C, Selinummi J, Birbaumer M, Dudley AM, Pelkmans L, Yli-Harja O. Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images. Bmc Bioinformatics. 11: 248. PMID 20465797 DOI: 10.1186/1471-2105-11-248  0.32
2009 Lee SI, Dudley AM, Drubin D, Silver PA, Krogan NJ, Pe'er D, Koller D. Learning a prior on regulatory potential from eQTL data. Plos Genetics. 5: e1000358. PMID 19180192 DOI: 10.1371/journal.pgen.1000358  0.32
2006 Lee SI, Pe'er D, Dudley AM, Church GM, Koller D. Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification. Proceedings of the National Academy of Sciences of the United States of America. 103: 14062-7. PMID 16968785 DOI: 10.1073/pnas.0601852103  0.32
2006 Dudley AM, Cardozo DL. Introduction to Biological Research: A Laboratory Course in Microbiology American Biology Teacher. 68: 14-23. DOI: 10.1662/0002-7685(2006)068[0014:ITBRAL]2.0.CO;2  0.32
2005 Dudley AM, Janse DM, Tanay A, Shamir R, Church GM. A global view of pleiotropy and phenotypically derived gene function in yeast. Molecular Systems Biology. 1: 2005.0001. PMID 16729036 DOI: 10.1038/msb4100004  0.32
2002 Dudley AM, Aach J, Steffen MA, Church GM. Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range. Proceedings of the National Academy of Sciences of the United States of America. 99: 7554-9. PMID 12032321 DOI: 10.1073/pnas.112683499  0.32
1999 Dudley AM, Rougeulle C, Winston F. The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo Genes and Development. 13: 2940-2945. PMID 10580001 DOI: 10.1101/gad.13.22.2940  0.32
1999 Dudley AM, Gansheroff LJ, Winston F. Specific components of the SAGA complex are required for Gcn4- and Gcr1- mediated activation of the his4-912δ promoter in Saccharomyces cerevisiae Genetics. 151: 1365-1378. PMID 10101163  0.32
1998 Madison JM, Dudley AM, Winston F. Identification and analysis of Mot3, a zinc finger protein that binds to the retrotransposon Ty long terminal repeat (δ) in Saccharomyces cerevisiae Molecular and Cellular Biology. 18: 1879-1890. PMID 9528759  0.32
1994 Pinkham JL, Dudley AM, Mason TL. T7 RNA polymerase-dependent expression of COXII in yeast mitochondria Molecular and Cellular Biology. 14: 4643-4652. PMID 8007968  0.32
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