Penny L. Humby, Ph.D. - Related publications

2010 University of New Brunswick (Canada) 
Microbiology Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Peng L, Li EM, Xu LY. From start to end: phase separation and transcriptional regulation. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194641. PMID 33017669 DOI: 10.1016/j.bbagrm.2020.194641   
2020 Bandekar AC, Subedi S, Ioerger TR, Sassetti CM. Cell-Cycle-Associated Expression Patterns Predict Gene Function in Mycobacteria. Current Biology : Cb. PMID 32916109 DOI: 10.1016/j.cub.2020.07.070   
2020 Zhu Y, Berkowitz O, Selinski J, Hartmann A, Narsai R, Wang Y, Mao P, Whelan J. Conserved and Opposite Transcriptome Patterns during Germination in and . International Journal of Molecular Sciences. 21. PMID 33036486 DOI: 10.3390/ijms21197404   
2020 Laghmach R, Potoyan D. Liquid-liquid phase separation driven compartmentalization of reactive nucleoplasm. Physical Biology. PMID 33113512 DOI: 10.1088/1478-3975/abc5ad   
2020 Soules KR, LaBrie SD, May BH, Hefty PS. Sigma 54-Regulated Transcription Is Associated with Membrane Reorganization and Type III Secretion Effectors during Conversion to Infectious Forms of Chlamydia trachomatis. Mbio. 11. PMID 32900805 DOI: 10.1128/mBio.01725-20   
2020 Qi M, Wu Q, Liu T, Hou Y, Miao Y, Hu M, Liu Q. Hepatopancreas Transcriptome Profiling Analysis Reveals Physiological Responses to Acute Hypoxia and Reoxygenation in Juvenile Qingtian Paddy Field Carp . Frontiers in Physiology. 11: 1110. PMID 33041847 DOI: 10.3389/fphys.2020.01110   
2020 Knittel V, Sadana P, Seekircher S, Stolle AS, Körner B, Volk M, Jeffries CM, Svergun DI, Heroven AK, Scrima A, Dersch P. RovC - a novel type of hexameric transcriptional activator promoting type VI secretion gene expression. Plos Pathogens. 16: e1008552. PMID 32966346 DOI: 10.1371/journal.ppat.1008552   
2020 Sasaki K, Uchiumi T, Toshima T, Yagi M, Do Y, Hirai H, Igami K, Gotoh K, Kang D. Mitochondrial translation inhibition triggers ATF4 activation, leading to integrated stress response but not to mitochondria unfolded protein response. Bioscience Reports. PMID 33165592 DOI: 10.1042/BSR20201289   
2020 Tarbier M, Mackowiak SD, Frade J, Catuara-Solarz S, Biryukova I, Gelali E, Menéndez DB, Zapata L, Ossowski S, Bienko M, Gallant CJ, Friedländer MR. Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells. Nature Communications. 11: 5445. PMID 33116115 DOI: 10.1038/s41467-020-19011-5   
2020 Adlat S, Sah RK, Hayel F, Chen Y, Bah FB, Al-Azab M, Bahadar N, Myint M, Oo ZM, Nasser MI, Zhang L, Feng X, Zheng Y. Global transcriptome study of Dip2B-deficient mouse embryonic lung fibroblast reveals its important roles in cell proliferation and development. Computational and Structural Biotechnology Journal. 18: 2381-2390. PMID 33005301 DOI: 10.1016/j.csbj.2020.08.030   
2020 Rice C, Macdonald SJ, Wang X, Ward RE. The Broad Transcription Factor Links Hormonal Signaling, Gene Expression and Cellular Morphogenesis Events During Imaginal Disc Development. Genetics. PMID 33115752 DOI: 10.1534/genetics.120.303717   
2020 Ramírez-Zapata D, Ramos C, Aguilera S, Bardaji L, Martínez-Gil M, Murillo J. Two Homologues of the Global Regulator Csr/Rsm Redundantly Control Phaseolotoxin Biosynthesis and Virulence in the Plant Pathogen pv. phaseolicola 1448A. Microorganisms. 8. PMID 33036191 DOI: 10.3390/microorganisms8101536   
2020 Kreynes AE, Yong Z, Ellis BE. Developmental phenotypes of plants expressing phosphovariants of . Plant Signaling & Behavior. 1836454. PMID 33100126 DOI: 10.1080/15592324.2020.1836454   
2020 Liu Y, Man J, Wang Y, Yuan C, Shi Y, Liu B, Hu X, Wu S, Zhang T, Lian C. Overexpression of Positively Regulates the Formation of Secondary Cell Wall in . International Journal of Molecular Sciences. 21. PMID 33086706 DOI: 10.3390/ijms21207734   
2020 Warmbold B, Ronzheimer S, Freibert SA, Seubert A, Hoffmann T, Bremer E. Two MarR-Type Repressors Balance Precursor Uptake and Glycine Betaine Synthesis in to Provide Cytoprotection Against Sustained Osmotic Stress. Frontiers in Microbiology. 11: 1700. PMID 32849357 DOI: 10.3389/fmicb.2020.01700   
2020 Xiao Y, Li LL, Bibi A, Zhang N, Chen T, Mo Y, Yue W, Miao Y. Role of Bm30kc6 gene in cell apoptosis and the silk gland degradation signaling pathway in Bombyx mori L. Archives of Insect Biochemistry and Physiology. e21741. PMID 33002240 DOI: 10.1002/arch.21741   
2020 Levy O, Amit G, Vaknin D, Snir T, Efroni S, Castaldi P, Liu YY, Cohen HY, Bashan A. Age-related loss of gene-to-gene transcriptional coordination among single cells. Nature Metabolism. PMID 33139959 DOI: 10.1038/s42255-020-00304-4   
2020 Charest J, Daniele T, Wang J, Bykov A, Mandlbauer A, Asparuhova M, Röhsner J, Gutiérrez-Pérez P, Cochella L. Combinatorial Action of Temporally Segregated Transcription Factors. Developmental Cell. PMID 33002421 DOI: 10.1016/j.devcel.2020.09.002   
2020 Ayers MC, Sherman ZN, Gallagher JEG. Oxidative Stress Responses and Nutrient Starvation in MCHM Treated . G3 (Bethesda, Md.). PMID 33109726 DOI: 10.1534/g3.120.401661   
2020 Yu G, Hui M, Li R, Zhang S. Pleiotropic regulation of daptomycin synthesis by DptR1, a LuxR family transcriptional regulator. World Journal of Microbiology & Biotechnology. 36: 173. PMID 33079235 DOI: 10.1007/s11274-019-2771-1   
2020 Du Y, Mo W, Ma T, Tang W, Tian L, Lin R. A pentatricopeptide repeat protein DUA1 interacts with sigma factor 1 to regulate chloroplast gene expression in Rice. Photosynthesis Research. PMID 33164144 DOI: 10.1007/s11120-020-00793-0   
2020 Wilson BC, Boehme L, Annibali A, Hodgkinson A, Carroll TS, Oakey RJ, Seitan VC. Intellectual disability-associated factor Zbtb11 cooperates with NRF-2/GABP to control mitochondrial function. Nature Communications. 11: 5469. PMID 33122634 DOI: 10.1038/s41467-020-19205-x   
2020 Kang G, Yan D, Chen X, Yang L, Zeng R. HbWRKY82, a novel IIc WRKY transcription factor from Hevea brasiliensis associated with abiotic stress tolerance and leaf senescence in Arabidopsis. Physiologia Plantarum. PMID 33034379 DOI: 10.1111/ppl.13238   
2020 de Souza-Guerreiro TC, Meng X, Dacheux E, Firczuk H, McCarthy J. Translational control of gene expression noise and its relationship to ageing in yeast. The Febs Journal. PMID 33090724 DOI: 10.1111/febs.15594   
2020 Zhu Y, Lu T, Zhang J, Zhang P, Tao M, Pang X. A novel XRE family regulator that controls antibiotic production and development in Streptomyces coelicolor. Applied Microbiology and Biotechnology. PMID 33057789 DOI: 10.1007/s00253-020-10950-z   
2020 Xu H, Wang J, Liang Y, Fu Y, Li S, Huang J, Xu H, Zou W, Chen B. TriTag: an integrative tool to correlate chromatin dynamics and gene expression in living cells. Nucleic Acids Research. PMID 33104788 DOI: 10.1093/nar/gkaa906   
2020 Anzai T, Imamura S, Ishihama A, Shimada T. Expanded roles of pyruvate-sensing PdhR in transcription regulation of the K-12 genome: fatty acid catabolism and cell motility. Microbial Genomics. PMID 32975502 DOI: 10.1099/mgen.0.000442   
2020 Hood SE, Kofler XV, Chen Q, Scott J, Ortega J, Lehmann M. Nuclear translocation ability of Lipin differentially affects gene expression and survival in fed and fasting . Journal of Lipid Research. PMID 32989002 DOI: 10.1194/jlr.RA120001051   
2020 Zarnack K, Balasubramanian S, Gantier MP, Kunetsky V, Kracht M, Schmitz ML, Sträßer K. Dynamic mRNP Remodeling in Response to Internal and External Stimuli. Biomolecules. 10. PMID 32932892 DOI: 10.3390/biom10091310   
2020 Han Q, Guo X, Jia K, Jing J, Dang W, Li Y, Qin X, Li P, Ren Y, Liu W, Kebreab E, Lyu L. Effects of FOXO1 on the proliferation and cell cycle-, apoptosis- and steroidogenesis-related genes expression in sheep granulosa cells. Animal Reproduction Science. 221: 106604. PMID 32980650 DOI: 10.1016/j.anireprosci.2020.106604   
2020 Islam S, Bhor SA, Tanaka K, Sakamoto H, Yaeno T, Kaya H, Kobayashi K. Transcriptome Analysis Shows Activation of Stress and Defense Responses by Silencing of Chlorophyll Biosynthetic Enzyme CHLI in Transgenic Tobacco. International Journal of Molecular Sciences. 21. PMID 32987929 DOI: 10.3390/ijms21197044   
2020 Zhang Z, Liu C, Guo Y. Wheat Transcription Factor TaSNAC11-4B Positively Regulates Leaf Senescence through Promoting ROS Production in Transgenic . International Journal of Molecular Sciences. 21. PMID 33081330 DOI: 10.3390/ijms21207672   
2020 Zheng PF, Wang X, Yang YY, You CX, Zhang ZL, Hao YJ. Identification of Phytochrome-Interacting Factor Family Members and Functional Analysis of in . International Journal of Molecular Sciences. 21. PMID 33027937 DOI: 10.3390/ijms21197350   
2020 Kirtana R, Manna S, Patra SK. Molecular mechanisms of KDM5A in cellular functions: Facets during development and disease. Experimental Cell Research. 112314. PMID 33010254 DOI: 10.1016/j.yexcr.2020.112314   
2020 Kirtana R, Manna S, Patra SK. Molecular mechanisms of KDM5A in cellular functions: Facets during development and disease. Experimental Cell Research. 112314. PMID 33010254 DOI: 10.1016/j.yexcr.2020.112314   
2020 Aljazi MB, Gao Y, Wu Y, Mias GI, He J. Cell Signaling Coordinates Global PRC2 Recruitment and Developmental Gene Expression in Murine Embryonic Stem Cells. Iscience. 23: 101646. PMID 33103084 DOI: 10.1016/j.isci.2020.101646   
2020 An SY, Lee M, Yoon HK, Abekura F, Kim KS, Kim DH, Kim HJ, Lee K, Kim CH, Lee YC. Regulation of human β-galactoside α2,6-sialyltransferase (hST6Gal I) gene expression during differentiation of human osteoblastic MG-63 cells. Glycoconjugate Journal. PMID 33108606 DOI: 10.1007/s10719-020-09959-3   
2020 Niu J, Ma M, Yin X, Liu X, Dong T, Sun W, Yang F. Transcriptional and physiological analyses of reduced density in apple provide insight into the regulation involved in photosynthesis. Plos One. 15: e0239737. PMID 33044972 DOI: 10.1371/journal.pone.0239737   
2020 Mao L, Deng M, Jiang S, Zhu H, Yang Z, Yue Y, Zhao K. Characterization of the DREBA4-Type Transcription Factor (SlDREBA4), Which Contributes to Heat Tolerance in Tomatoes. Frontiers in Plant Science. 11: 554520. PMID 33101326 DOI: 10.3389/fpls.2020.554520   
2020 Yan P, Lu JY, Niu J, Gao J, Zhang MQ, Yin Y, Shen X. LncRNA Platr22 promotes super-enhancer activity and stem cell pluripotency. Journal of Molecular Cell Biology. PMID 33049031 DOI: 10.1093/jmcb/mjaa056   
2020 Jin J, Li Y, Zhou Z, Zhang H, Guo J, Wan F. Heat Shock Factor Is Involved in Regulating the Transcriptional Expression of Two Potential Hsps ( and ) and Its Role in Heat Shock Response of . Frontiers in Physiology. 11: 562204. PMID 33041860 DOI: 10.3389/fphys.2020.562204   
2020 Mertens JA, Skory CD, Nichols NN, Hector RE. Impact of stress-response related transcription factor overexpression on lignocellulosic inhibitor tolerance of Saccharomyces cerevisiae environmental isolates. Biotechnology Progress. e3094. PMID 33085224 DOI: 10.1002/btpr.3094   
2020 Pei W, Jain A, Zhao G, Feng B, Xu D, Wang X. Knockdown of OsSAE1a affects the growth and development and phosphate homeostasis in rice. Journal of Plant Physiology. 255: 153275. PMID 33161338 DOI: 10.1016/j.jplph.2020.153275   
2020 Robert VJ, Knutson AK, Rechtsteiner A, Garvis S, Yvert G, Strome S, Palladino F. SET1/COMPASS Maintains Germline Identity by Preventing Transcriptional Deregulation Across Generations. Frontiers in Cell and Developmental Biology. 8: 561791. PMID 33072747 DOI: 10.3389/fcell.2020.561791   
2020 Ziegler N, Bader E, Epanchintsev A, Margerie D, Kannt A, Schmoll D. AMPKβ1 and AMPKβ2 define an isoform-specific gene signature in human pluripotent stem cells, differentially mediating cardiac lineage specification. The Journal of Biological Chemistry. PMID 33067322 DOI: 10.1074/jbc.RA120.013990   
2020 Giosa D, Felice MR, Giuffrè L, Aiese Cigliano R, Paytuví-Gallart A, Lo Passo C, Barresi C, D'Alessandro E, Huang H, Criseo G, Mora-Montes HM, de Hoog S, Romeo O. Transcriptome-wide expression profiling of yeast and mycelial forms and the establishment of the Sporothrix Genome DataBase. Microbial Genomics. PMID 33034552 DOI: 10.1099/mgen.0.000445   
2020 Leszczyński P, Śmiech M, Salam Teeli A, Haque E, Viger R, Ogawa H, Pierzchała M, Taniguchi H. Deletion of the Gene Causes a Neuronal Differentiation Deficiency in P19 Cells. International Journal of Molecular Sciences. 21. PMID 33003409 DOI: 10.3390/ijms21197192   
2020 Leszczyński P, Śmiech M, Salam Teeli A, Haque E, Viger R, Ogawa H, Pierzchała M, Taniguchi H. Deletion of the Gene Causes a Neuronal Differentiation Deficiency in P19 Cells. International Journal of Molecular Sciences. 21. PMID 33003409 DOI: 10.3390/ijms21197192   
2020 Lira BS, Oliveira MJ, Shiose L, Wu RTA, Rosado D, Lupi ACD, Freschi L, Rossi M. Light and ripening-regulated BBX protein-encoding genes in Solanum lycopersicum. Scientific Reports. 10: 19235. PMID 33159121 DOI: 10.1038/s41598-020-76131-0   
2020 Wang L, Qiao H. Chromatin regulation in plant hormone and plant stress responses. Current Opinion in Plant Biology. 57: 164-170. PMID 33142261 DOI: 10.1016/j.pbi.2020.08.007