☰

John J. Karijolich, Ph.D. - Publications

Affiliations: 
2011 University of Rochester, Rochester, NY 
Area:
Biochemistry
Tree Info Similar researchers PubMed Report error

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Qu S, Nelson H, Liu X, Semler E, Michell DL, Massick C, Franklin JL, Karijolich J, Weaver AM, Coffey RJ, Liu Q, Vickers KC, Patton JG. 5-Fluorouracil Treatment Represses Pseudouridine-Containing Small RNA Export into Extracellular Vesicles. Biorxiv : the Preprint Server For Biology. PMID 38293013 DOI: 10.1101/2024.01.15.575751  0.558
2024 Zhang R, Karijolich J. RNA recognition by PKR during DNA virus infection. Journal of Medical Virology. 96: e29424. PMID 38285432 DOI: 10.1002/jmv.29424  0.482
2023 Rajendren S, Ye X, Dunker W, Richardson A, Karijolich J. The cellular and KSHV A-to-I RNA editome in primary effusion lymphoma and its role in the viral lifecycle. Nature Communications. 14: 1367. PMID 36914661 DOI: 10.1038/s41467-023-37105-8  0.584
2022 Rajendren S, Karijolich J. The impact of RNA modifications on the biology of DNA virus infection. European Journal of Cell Biology. 101: 151239. PMID 35623231 DOI: 10.1016/j.ejcb.2022.151239  0.603
2021 Thoner TW, Ye X, Karijolich J, Ogden KM. Reovirus Low-Density Particles Package Cellular RNA. Viruses. 13. PMID 34201386 DOI: 10.3390/v13061096  0.597
2021 Dunker W, Ye X, Zhao Y, Liu L, Richardson A, Karijolich J. TDP-43 prevents endogenous RNAs from triggering a lethal RIG-I-dependent interferon response. Cell Reports. 35: 108976. PMID 33852834 DOI: 10.1016/j.celrep.2021.108976  0.599
2020 Zhao Y, Ye X, Shehata M, Dunker W, Xie Z, Karijolich J. The RNA quality control pathway nonsense-mediated mRNA decay targets cellular and viral RNAs to restrict KSHV. Nature Communications. 11: 3345. PMID 32620802 DOI: 10.1038/S41467-020-17151-2  0.643
2019 Zhao Y, Karijolich J. Know Thyself: RIG-I-Like Receptor Sensing of DNA Virus Infection. Journal of Virology. PMID 31511389 DOI: 10.1128/Jvi.01085-19  0.477
2019 Ye X, Zhao Y, Karijolich J. The landscape of transcription initiation across latent and lytic KSHV genomes. Plos Pathogens. 15: e1007852. PMID 31188901 DOI: 10.1371/Journal.Ppat.1007852  0.47
2019 Heinrich MJ, Purcell CA, Pruijssers AJ, Zhao Y, Spurlock CF, Sriram S, Ogden KM, Dermody TS, Scholz MB, Crooke PS, Karijolich J, Aune TM. Endogenous double-stranded Alu RNA elements stimulate IFN-responses in relapsing remitting multiple sclerosis. Journal of Autoimmunity. PMID 30826177 DOI: 10.1016/J.Jaut.2019.02.003  0.539
2018 Zhao Y, Ye X, Dunker W, Song Y, Karijolich J. RIG-I like receptor sensing of host RNAs facilitates the cell-intrinsic immune response to KSHV infection. Nature Communications. 9: 4841. PMID 30451863 DOI: 10.1038/S41467-018-07314-7  0.627
2018 Dunker W, Song Y, Zhao Y, Karijolich J. FUS Negatively Regulates Kaposi's Sarcoma-Associated Herpesvirus Gene Expression. Viruses. 10. PMID 29986386 DOI: 10.3390/V10070359  0.504
2018 Hesser C, Karijolich J, Dominissini D, He C, Glaunsinger BA. N6-methyladenosine modification and the YTHDF2 reader protein play cell type specific roles in lytic viral gene expression during Kaposi's sarcoma-associated herpesvirus infection. Plos Pathogens. 14: e1006995. PMID 29659627 DOI: 10.1371/Journal.Ppat.1006995  0.445
2018 Zhao Y, Dunker W, Yu YT, Karijolich J. The Role of Noncoding RNA Pseudouridylation in Nuclear Gene Expression Events. Frontiers in Bioengineering and Biotechnology. 6: 8. PMID 29473035 DOI: 10.3389/Fbioe.2018.00008  0.759
2017 Dunker W, Zhao Y, Song Y, Karijolich J. Recognizing the SINEs of Infection: Regulation of Retrotransposon Expression and Modulation of Host Cell Processes. Viruses. 9. PMID 29258254 DOI: 10.3390/V9120386  0.399
2017 Ge J, Karijolich J, Zhai Y, Zheng J, Yu YT. 5-Fluorouracil Treatment Alters the Efficiency of Translational Recoding. Genes. 8. PMID 29088058 DOI: 10.3390/Genes8110295  0.68
2017 Karijolich J, Zhao Y, Alla R, Glaunsinger B. Genome-wide mapping of infection-induced SINE RNAs reveals a role in selective mRNA export. Nucleic Acids Research. PMID 28334904 DOI: 10.1093/Nar/Gkx180  0.68
2016 Zhao Y, Karijolich J, Glaunsinger B, Zhou Q. Pseudouridylation of 7SK snRNA promotes 7SK snRNP formation to suppress HIV-1 transcription and escape from latency. Embo Reports. PMID 27558685 DOI: 10.15252/Embr.201642682  0.472
2016 Huang C, Karijolich J, Yu YT. Detection and quantification of RNA 2'-O-methylation and pseudouridylation. Methods (San Diego, Calif.). PMID 26853326 DOI: 10.1016/J.Ymeth.2016.02.003  0.743
2015 Karijolich J, Abernathy E, Glaunsinger BA. Infection-Induced Retrotransposon-Derived Noncoding RNAs Enhance Herpesviral Gene Expression via the NF-κB Pathway. Plos Pathogens. 11: e1005260. PMID 26584434 DOI: 10.1371/Journal.Ppat.1005260  0.627
2015 Karijolich J, Yi C, Yu YT. Transcriptome-wide dynamics of RNA pseudouridylation. Nature Reviews. Molecular Cell Biology. PMID 26285676 DOI: 10.1038/Nrm4040  0.756
2015 Karijolich J, Yu YT. The new era of RNA modification. Rna (New York, N.Y.). 21: 659-60. PMID 25780180 DOI: 10.1261/Rna.049650.115  0.761
2014 Lim SJ, Scott A, Xiong XP, Vahidpour S, Karijolich J, Guo D, Pei S, Yu YT, Zhou R, Li WX. Requirement for CRIF1 in RNA interference and Dicer-2 stability. Rna Biology. 11: 1171-9. PMID 25483042 DOI: 10.4161/Rna.34381  0.68
2014 Karijolich J, Yu YT. Therapeutic suppression of premature termination codons: mechanisms and clinical considerations (review). International Journal of Molecular Medicine. 34: 355-62. PMID 24939317 DOI: 10.3892/Ijmm.2014.1809  0.584
2014 Karijolich J, Zhao Y, Peterson B, Zhou Q, Glaunsinger B. Kaposi's sarcoma-associated herpesvirus ORF45 mediates transcriptional activation of the HIV-1 long terminal repeat via RSK2. Journal of Virology. 88: 7024-35. PMID 24719417 DOI: 10.1128/Jvi.00931-14  0.354
2012 Karijolich JJ, Hampsey M. The Mediator complex. Current Biology : Cb. 22: R1030-1. PMID 23257183 DOI: 10.1016/J.Cub.2012.11.011  0.44
2011 Karijolich J, Yu YT. Converting nonsense codons into sense codons by targeted pseudouridylation. Nature. 474: 395-8. PMID 21677757 DOI: 10.1038/Nature10165  0.664
2011 Huang C, Karijolich J, Yu YT. Post-transcriptional modification of RNAs by artificial Box H/ACA and Box C/D RNPs. Methods in Molecular Biology (Clifton, N.J.). 718: 227-44. PMID 21370052 DOI: 10.1007/978-1-61779-018-8_14  0.757
2010 Karijolich J, Kantartzis A, Yu YT. Quantitative analysis of RNA modifications. Methods in Molecular Biology (Clifton, N.J.). 629: 21-32. PMID 20387140 DOI: 10.1007/978-1-60761-657-3_2  0.732
2010 Karijolich J, Kantartzis A, Yu YT. RNA modifications: a mechanism that modulates gene expression. Methods in Molecular Biology (Clifton, N.J.). 629: 1-19. PMID 20387139 DOI: 10.1007/978-1-60761-657-3_1  0.692
2010 Karijolich J, Yu YT. Spliceosomal snRNA modifications and their function. Rna Biology. 7: 192-204. PMID 20215871 DOI: 10.4161/Rna.7.2.11207  0.732
2008 Karijolich J, Yu YT. Insight into the Protein Components of the Box H/ACA RNP. Current Proteomics. 5: 129-137. PMID 19829749 DOI: 10.2174/157016408784911936  0.688
2007 Karijolich J, Stephenson D, Yu YT. Biochemical purification of box H/ACA RNPs involved in pseudouridylation. Methods in Enzymology. 425: 241-62. PMID 17673087 DOI: 10.1016/S0076-6879(07)25011-6  0.727
Show low-probability matches.