Jake V. Bailey, Ph.D. - Publications

Affiliations: 
2008 Geological Sciences University of Southern California, Los Angeles, CA, United States 
Area:
Paleontology, Geology, Microbiology Biology

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Flood BE, Louw DC, Van der Plas AK, Bailey JV. Giant sulfur bacteria (Beggiatoaceae) from sediments underlying the Benguela upwelling system host diverse microbiomes. Plos One. 16: e0258124. PMID 34818329 DOI: 10.1371/journal.pone.0258124  0.328
2021 Medina Ferrer F, Rosen MR, Feyhl-Buska J, Russell VV, Sønderholm F, Loyd S, Shapiro R, Stamps BW, Petryshyn V, Demirel-Floyd C, Bailey JV, Johnson HA, Spear JR, Corsetti FA. Potential role for microbial ureolysis in the rapid formation of carbonate tufa mounds. Geobiology. PMID 34337850 DOI: 10.1111/gbi.12467  0.636
2021 Leprich DJ, Flood BE, Schroedl PR, Ricci E, Marlow JJ, Girguis PR, Bailey JV. Sulfur bacteria promote dissolution of authigenic carbonates at marine methane seeps. The Isme Journal. PMID 33574572 DOI: 10.1038/s41396-021-00903-3  0.385
2021 Petryshyn VA, Junkins EN, Stamps BW, Bailey JV, Stevenson BS, Spear JR, Corsetti FA. Builders, tenants, and squatters: the origins of genetic material in modern stromatolites. Geobiology. PMID 33524239 DOI: 10.1111/gbi.12429  0.714
2020 Medina Ferrer F, Hobart K, Bailey JV. Field detection of urease and carbonic anhydrase activity using rapid and economical tests to assess microbially induced carbonate precipitation. Microbial Biotechnology. PMID 32720477 DOI: 10.1111/1751-7915.13630  0.402
2019 Larina E, Bottjer DJ, Corsetti FA, Zonneveld JP, Celestian AJ, Bailey JV. Uppermost Triassic phosphorites from Williston Lake, Canada: link to fluctuating euxinic-anoxic conditions in northeastern Panthalassa before the end-Triassic mass extinction. Scientific Reports. 9: 18790. PMID 31827166 DOI: 10.1038/S41598-019-55162-2  0.641
2019 Jones DS, Walker GM, Johnson NW, Mitchell CPJ, Coleman Wasik JK, Bailey JV. Molecular evidence for novel mercury methylating microorganisms in sulfate-impacted lakes. The Isme Journal. PMID 30809010 DOI: 10.1038/S41396-019-0376-1  0.393
2019 Lumiste K, Mänd K, Bailey J, Paiste P, Lang L, Lepland A, Kirsimäe K. REE+Y uptake and diagenesis in Recent sedimentary apatites Chemical Geology. 525: 268-281. DOI: 10.1016/J.Chemgeo.2019.07.034  0.324
2018 Zoss R, Medina Ferrer F, Flood BE, Jones DS, Louw DC, Bailey J. Microbial communities associated with phosphogenic sediments and phosphoclast-associated DNA of the Benguela upwelling system. Geobiology. PMID 30369004 DOI: 10.1111/Gbi.12318  0.51
2018 Mänd K, Kirsimäe K, Lepland A, Crosby CH, Bailey JV, Konhauser KO, Wirth R, Schreiber A, Lumiste K. Authigenesis of biomorphic apatite particles from Benguela upwelling zone sediments off Namibia: The role of organic matter in sedimentary apatite nucleation and growth. Geobiology. PMID 30062734 DOI: 10.1111/Gbi.12309  0.445
2018 Flood BE, Leprich D, Bailey JV. Complete Genome Sequence of Celeribacter baekdonensis Strain LH4, a Thiosulfate-Oxidizing Alphaproteobacterial Isolate from Gulf of Mexico Continental Slope Sediments. Genome Announcements. 6. PMID 29773637 DOI: 10.1128/Genomea.00434-18  0.312
2018 Breiland AA, Flood BE, Nikrad J, Bakarich J, Husman M, Rhee T, Jones RS, Bailey JV. Polyphosphate-accumulating Bacteria: Potential Contributors to Mineral Dissolution in the Oral Cavity. Applied and Environmental Microbiology. PMID 29352083 DOI: 10.1128/Aem.02440-17  0.361
2018 Harrison BK, Myrbo A, Flood BE, Bailey JV. Abrupt burial imparts persistent changes to the bacterial diversity of turbidite-associated sediment profiles. Geobiology. PMID 29350440 DOI: 10.1111/Gbi.12271  0.453
2018 Medina Ferrer F, Bailey JV, Corsetti F, Moldowan JM, Barbanti SM, Caron D, Bryant-Huppert J. Assessing biomarker syngeneity: An in situ approach using monoclonal antibodies Organic Geochemistry. 124: 112-122. DOI: 10.1016/J.Orggeochem.2018.05.006  0.549
2017 Bailey JV, Flood BE, Ricci E, Delherbe N. Imaging of Cellular Oxidoreductase Activity Suggests Mixotrophic Metabolisms in Thiomargarita spp. Mbio. 8. PMID 29114021 DOI: 10.1128/Mbio.01263-17  0.358
2017 Crosby CH, Bailey JV. Experimental precipitation of apatite pseudofossils resembling fossil embryos. Geobiology. PMID 29047205 DOI: 10.1111/Gbi.12264  0.366
2017 Jones DS, Roepke EW, Hua AA, Flood BE, Bailey JV. Complete Genome Sequence of Sulfuriferula sp. Strain AH1, a Sulfur-Oxidizing Autotroph Isolated from Weathered Mine Tailings from the Duluth Complex in Minnesota. Genome Announcements. 5. PMID 28798167 DOI: 10.1128/Genomea.00673-17  0.312
2017 Jones DS, Lapakko KA, Wenz ZJ, Olson MC, Roepke EW, Sadowsky MJ, Novak PJ, Bailey JV. Novel microbial assemblages dominate weathered sulfide-bearing rock from copper-nickel deposits in the Duluth Complex, Minnesota, USA. Applied and Environmental Microbiology. PMID 28600313 DOI: 10.1128/Aem.00909-17  0.401
2017 Sharrar AM, Flood BE, Bailey JV, Jones DS, Biddanda BA, Ruberg SA, Marcus DN, Dick GJ. Novel Large Sulfur Bacteria in the Metagenomes of Groundwater-Fed Chemosynthetic Microbial Mats in the Lake Huron Basin. Frontiers in Microbiology. 8: 791. PMID 28533768 DOI: 10.3389/Fmicb.2017.00791  0.455
2016 Winkel M, Salman-Carvalho V, Woyke T, Richter M, Schulz-Vogt HN, Flood BE, Bailey JV, Mußmann M. Single-cell Sequencing of Thiomargarita Reveals Genomic Flexibility for Adaptation to Dynamic Redox Conditions. Frontiers in Microbiology. 7: 964. PMID 27446006 DOI: 10.3389/Fmicb.2016.00964  0.392
2016 Flood BE, Fliss P, Jones DS, Dick GJ, Jain S, Kaster AK, Winkel M, Mußmann M, Bailey J. Single-Cell (Meta-)Genomics of a Dimorphic Candidatus Thiomargarita nelsonii Reveals Genomic Plasticity. Frontiers in Microbiology. 7: 603. PMID 27199933 DOI: 10.3389/Fmicb.2016.00603  0.372
2016 Harrison BK, Myrbo A, Flood BE, Bailey JV. Identification of subannual patterns in microbial community signatures from individual sedimentary laminae using a freeze-coring approach Limnology and Oceanography. 61: 735-747. DOI: 10.1002/Lno.10250  0.404
2015 Stevens EW, Bailey JV, Flood BE, Jones DS, Gilhooly WP, Joye SB, Teske A, Mason OU. Barite encrustation of benthic sulfur-oxidizing bacteria at a marine cold seep. Geobiology. 13: 588-603. PMID 26462132 DOI: 10.1111/Gbi.12154  0.451
2015 Jones DS, Flood BE, Bailey JV. Metatranscriptomic insights into polyphosphate metabolism in marine sediments. The Isme Journal. PMID 26381585 DOI: 10.1038/Ismej.2015.169  0.386
2015 Flood BE, Jones DS, Bailey JV. Complete Genome Sequence of Sedimenticola thiotaurini Strain SIP-G1, a Polyphosphate- and Polyhydroxyalkanoate-Accumulating Sulfur-Oxidizing Gammaproteobacterium Isolated from Salt Marsh Sediments. Genome Announcements. 3. PMID 26089430 DOI: 10.1128/Genomea.00671-15  0.318
2015 Mason OU, Case DH, Naehr TH, Lee RW, Thomas RB, Bailey JV, Orphan VJ. Comparison of Archaeal and Bacterial Diversity in Methane Seep Carbonate Nodules and Host Sediments, Eel River Basin and Hydrate Ridge, USA. Microbial Ecology. PMID 25947096 DOI: 10.1007/S00248-015-0615-6  0.529
2015 Flood BE, Jones DS, Bailey JV. Sedimenticola thiotaurini sp. nov., a sulfide-oxidizing bacterium isolated from salt marsh sediments, and emended description of the genus Sedimenticola and Sedimenticola selenatireducens. International Journal of Systematic and Evolutionary Microbiology. PMID 25944805 DOI: 10.1099/Ijs.0.000295  0.388
2015 Jones DS, Flood BE, Bailey JV. Metatranscriptomic analysis of diminutive Thiomargarita-like bacteria ("Candidatus Thiopilula" spp.) from abyssal cold seeps of the Barbados Accretionary Prism. Applied and Environmental Microbiology. 81: 3142-56. PMID 25724961 DOI: 10.1128/Aem.00039-15  0.401
2014 Flood BE, Bailey JV, Biddle JF. Horizontal gene transfer and the rock record: comparative genomics of phylogenetically distant bacteria that induce wrinkle structure formation in modern sediments. Geobiology. 12: 119-32. PMID 24382125 DOI: 10.1111/Gbi.12072  0.452
2014 Crosby CH, Bailey JV, Sharma M. Fossil evidence of iron-oxidizing chemolithotrophy linked to phosphogenesis in the wake of the Great Oxidation Event Geology. 42: 1015-1018. DOI: 10.1130/G35922.1  0.334
2013 Salman V, Bailey JV, Teske A. Phylogenetic and morphologic complexity of giant sulphur bacteria. Antonie Van Leeuwenhoek. 104: 169-86. PMID 23793621 DOI: 10.1007/S10482-013-9952-Y  0.367
2013 Bailey JV, Corsetti FA, Greene SE, Crosby CH, Liu P, Orphan VJ. Filamentous sulfur bacteria preserved in modern and ancient phosphatic sediments: implications for the role of oxygen and bacteria in phosphogenesis. Geobiology. 11: 397-405. PMID 23786451 DOI: 10.1111/Gbi.12046  0.651
2012 Crosby CH, Bailey JV. The role of microbes in the formation of modern and ancient phosphatic mineral deposits. Frontiers in Microbiology. 3: 241. PMID 22783245 DOI: 10.3389/Fmicb.2012.00241  0.459
2012 Cunningham JA, Thomas CW, Bengtson S, Marone F, Stampanoni M, Turner FR, Bailey JV, Raff RA, Raff EC, Donoghue PC. Experimental taphonomy of giant sulphur bacteria: implications for the interpretation of the embryo-like Ediacaran Doushantuo fossils. Proceedings. Biological Sciences / the Royal Society. 279: 1857-64. PMID 22158954 DOI: 10.1098/Rspb.2011.2064  0.393
2011 Bailey JV, Salman V, Rouse GW, Schulz-Vogt HN, Levin LA, Orphan VJ. Dimorphism in methane seep-dwelling ecotypes of the largest known bacteria. The Isme Journal. 5: 1926-35. PMID 21697959 DOI: 10.1038/Ismej.2011.66  0.368
2011 Salman V, Amann R, Girnth AC, Polerecky L, Bailey JV, Høgslund S, Jessen G, Pantoja S, Schulz-Vogt HN. A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria. Systematic and Applied Microbiology. 34: 243-59. PMID 21498017 DOI: 10.1016/J.Syapm.2011.02.001  0.342
2010 Bailey JV, Raub TD, Meckler AN, Harrison BK, Raub TMD, Green AM, Orphan VJ. Pseudofossils in relict methane seep carbonates resemble endemic microbial consortia Palaeogeography, Palaeoclimatology, Palaeoecology. 285: 131-142. DOI: 10.1016/J.Palaeo.2009.11.002  0.457
2009 Bailey JV, Orphan VJ, Joye SB, Corsetti FA. Chemotrophic microbial mats and their potential for preservation in the rock record. Astrobiology. 9: 843-59. PMID 19968462 DOI: 10.1089/Ast.2008.0314  0.682
2007 Bailey JV, Joye SB, Kalanetra KM, Flood BE, Corsetti FA. Evidence of giant sulphur bacteria in Neoproterozoic phosphorites. Nature. 445: 198-201. PMID 17183268 DOI: 10.1038/Nature05457  0.622
2007 Bailey JV, Joye SB, Kalanetra KM, Flood BE, Corsetti FA. Palaeontology: Undressing and redressing Ediacaran embryos (reply) Nature. 446: E10-E11. DOI: 10.1038/Nature05754  0.561
2006 Bailey JV, Corsetti FA, Bottjer DJ, Marenco KN. Microbially-mediated environmental influences on metazoan colonization of matground ecosystems: Evidence from the Lower Cambrian Harkless Formation Palaios. 21: 215-226. DOI: 10.2110/Palo.2005-P05-51E  0.646
2005 Bailey JV, Cohen AS, Kring DA. Lacustrine fossil preservation in acidic environments: Implications of experimental and field studies for the Cretaceous-Paleogene boundary acid rain trauma Palaios. 20: 376-389. DOI: 10.2110/Palo.2003.P03-88  0.316
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