John W. Taylor, PhD - Publications

Affiliations: 
1980- University of California, Berkeley University of California, Berkeley, Berkeley, CA, United States 
Area:
Mycology, evolution
Website:
http://nature.berkeley.edu/taylorlab/

219 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Phillips S, Jones I, Sondermyer-Cooksey G, Yu AT, Heaney AK, Zhou B, Bhattachan A, Weaver AK, Campo SK, Mgbara W, Wagner R, Taylor J, Lettenmaier D, Okin GS, Jain S, et al. Association between wildfires and coccidioidomycosis incidence in California, 2000-2018: a synthetic control analysis. Environmental Epidemiology (Philadelphia, Pa.). 7: e254. PMID 37545805 DOI: 10.1097/EE9.0000000000000254  0.438
2023 Wagner R, Montoya L, Head JR, Campo S, Remais J, Taylor JW. Coccidioides undetected in soils from agricultural land and uncorrelated with time or the greater soil fungal community on undeveloped land. Plos Pathogens. 19: e1011391. PMID 37228157 DOI: 10.1371/journal.ppat.1011391  0.45
2022 Head JR, Sondermeyer-Cooksey G, Heaney AK, Yu AT, Jones I, Bhattachan A, Campo SK, Wagner R, Mgbara W, Phillips S, Keeney N, Taylor J, Eisen E, Lettenmaier DP, Hubbard A, et al. Effects of precipitation, heat, and drought on incidence and expansion of coccidioidomycosis in western USA: a longitudinal surveillance study. The Lancet. Planetary Health. 6: e793-e803. PMID 36208642 DOI: 10.1016/S2542-5196(22)00202-9  0.433
2022 Case NT, Berman J, Blehert DS, Cramer RA, Cuomo C, Currie CR, Ene IV, Fisher MC, Fritz-Laylin LK, Gerstein AC, Glass NL, Gow NAR, Gurr SJ, Hittinger CT, Hohl TM, ... ... Taylor JW, et al. The future of fungi: threats and opportunities. G3 (Bethesda, Md.). PMID 36179219 DOI: 10.1093/g3journal/jkac224  0.713
2022 Wagner R, Montoya L, Gao C, Head JR, Remais J, Taylor JW. The air mycobiome is decoupled from the soil mycobiome in the California San Joaquin Valley. Molecular Ecology. PMID 35933707 DOI: 10.1111/mec.16640  0.632
2022 Gao C, Xu L, Montoya L, Madera M, Hollingsworth J, Chen L, Purdom E, Singan V, Vogel J, Hutmacher RB, Dahlberg JA, Coleman-Derr D, Lemaux PG, Taylor JW. Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities. Nature Communications. 13: 3867. PMID 35790741 DOI: 10.1038/s41467-022-31343-y  0.47
2022 Gao C, Courty PE, Varoquaux N, Cole B, Montoya L, Xu L, Purdom E, Vogel J, Hutmacher RB, Dahlberg JA, Coleman-Derr D, Lemaux PG, Taylor JW. Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression. Molecular Ecology. PMID 35000239 DOI: 10.1111/mec.16343  0.544
2021 Willing CE, Pierroz G, Guzman A, Anderegg LDL, Gao C, Coleman-Derr D, Taylor JW, Bruns TD, Dawson TE. Keep your friends close: Host compartmentalisation of microbial communities facilitates decoupling from effects of habitat fragmentation. Ecology Letters. PMID 34523223 DOI: 10.1111/ele.13886  0.502
2021 Vite-Garín T, Estrada-Bárcenas DA, Gernandt DS, Reyes-Montes MDR, Sahaza JH, Canteros CE, Ramírez JA, Rodríguez-Arellanes G, Serra-Damasceno L, Zancopé-Oliveira RM, Taylor JW, Taylor ML. Isolated from Bats Captured in Mexico Form a Sister Group to North American Class 2 Clade. Journal of Fungi (Basel, Switzerland). 7. PMID 34209122 DOI: 10.3390/jof7070529  0.316
2021 Xu L, Dong Z, Chiniquy D, Pierroz G, Deng S, Gao C, Diamond S, Simmons T, Wipf HM, Caddell D, Varoquaux N, Madera MA, Hutmacher R, Deutschbauer A, Dahlberg JA, ... ... Taylor JW, et al. Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics. Nature Communications. 12: 3209. PMID 34050180 DOI: 10.1038/s41467-021-23553-7  0.49
2021 Xu L, Pierroz G, Wipf HM, Gao C, Taylor JW, Lemaux PG, Coleman-Derr D. Holo-omics for deciphering plant-microbiome interactions. Microbiome. 9: 69. PMID 33762001 DOI: 10.1186/s40168-021-01014-z  0.497
2020 Wipf HM, Xu L, Gao C, Spinner HB, Taylor J, Lemaux P, Mitchell J, Coleman-Derr D. Agricultural Soil Management Practices Differentially Shape the Bacterial and Fungal Microbiome of . Applied and Environmental Microbiology. PMID 33310712 DOI: 10.1128/AEM.02345-20  0.503
2020 Berbee ML, Strullu-Derrien C, Delaux PM, Strother PK, Kenrick P, Selosse MA, Taylor JW. Genomic and fossil windows into the secret lives of the most ancient fungi. Nature Reviews. Microbiology. PMID 32908302 DOI: 10.1038/S41579-020-0426-8  0.666
2020 Hamm PS, Taylor JW, Cook JA, Natvig DO. Decades-old studies of fungi associated with mammalian lungs and modern DNA sequencing approaches help define the nature of the lung mycobiome. Plos Pathogens. 16: e1008684. PMID 32730326 DOI: 10.1371/Journal.Ppat.1008684  0.646
2020 Adams RI, Sylvain I, Spilak MP, Taylor JW, Waring MS, Mendell MJ. Identifying a fungal signature of moisture damage in buildings: targeted and untargeted approaches with mycobiome data. Applied and Environmental Microbiology. PMID 32591374 DOI: 10.1128/Aem.01047-20  0.777
2020 Fisher MC, Gurr SJ, Cuomo CA, Blehert DS, Jin H, Stukenbrock EH, Stajich JE, Kahmann R, Boone C, Denning DW, Gow NAR, Klein BS, Kronstad JW, Sheppard DC, Taylor JW, et al. Threats Posed by the Fungal Kingdom to Humans, Wildlife, and Agriculture. Mbio. 11. PMID 32371596 DOI: 10.1128/Mbio.00449-20  0.669
2020 Gladieux P, De Bellis F, Hann-Soden C, Svedberg J, Johannesson H, Taylor JW. Neurospora from Natural Populations: Population Genomics Insights into the Life History of a Model Microbial Eukaryote. Methods in Molecular Biology (Clifton, N.J.). 2090: 313-336. PMID 31975173 DOI: 10.1007/978-1-0716-0199-0_13  0.803
2020 Gao C, Montoya L, Xu L, Madera M, Hollingsworth J, Purdom E, Singan V, Vogel J, Hutmacher RB, Dahlberg JA, Coleman-Derr D, Lemaux PG, Taylor JW. Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics. Nature Communications. 11: 34. PMID 31911594 DOI: 10.1038/S41467-019-13913-9  0.536
2020 Steidinger BS, Bhatnagar JM, Vilgalys R, Taylor JW, Qin C, Zhu K, Bruns TD, Peay KG. Ectomycorrhizal fungal diversity predicted to substantially decline due to climate changes in North American Pinaceae forests Journal of Biogeography. 47: 772-782. DOI: 10.1111/Jbi.13802  0.771
2019 Varoquaux N, Cole B, Gao C, Pierroz G, Baker CR, Patel D, Madera M, Jeffers T, Hollingsworth J, Sievert J, Yoshinaga Y, Owiti JA, Singan VR, DeGraaf S, Xu L, ... ... Taylor JW, et al. Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses. Proceedings of the National Academy of Sciences of the United States of America. PMID 31806758 DOI: 10.1073/Pnas.1907500116  0.554
2019 Whiston E, Taylor JW. Genomics in Coccidioides: Insights into evolution, ecology, and pathogenesis. Medical Mycology. PMID 31728523 DOI: 10.1093/Mmy/Myz107  0.805
2019 Berbee ML, Taylor JW. Kenneth Wells, 24 July 1927-19 July 2016. Mycologia. 1-4. PMID 31021716 DOI: 10.1080/00275514.2019.1591873  0.545
2019 Vilela R, Humber RA, Taylor JW, Mendoza L. Phylogenetic and physiological traits of oomycetes originally identified as Lagenidium giganteum from fly and mosquito larvae. Mycologia. 1-15. PMID 30985262 DOI: 10.1080/00275514.2019.1589316  0.383
2019 Sylvain IA, Adams RI, Taylor JW. A different suite: The assemblage of distinct fungal communities in water-damaged units of a poorly-maintained public housing building. Plos One. 14: e0213355. PMID 30883565 DOI: 10.1371/Journal.Pone.0213355  0.786
2019 Taylor JW, Barker BM. The endozoan, small-mammal reservoir hypothesis and the life cycle of Coccidioides species. Medical Mycology. 57: S16-S20. PMID 30690603 DOI: 10.1093/Mmy/Myy039  0.391
2018 Hibbett DS, Blackwell M, James TY, Spatafora JW, Taylor JW, Vilgalys R. Phylogenetic taxon definitions for and . Ima Fungus. 9: 291-298. PMID 30622884 DOI: 10.5598/imafungus.2018.09.02.05  0.66
2018 Cernak P, Estrela R, Poddar S, Skerker JM, Cheng YF, Carlson AK, Chen B, Glynn VM, Furlan M, Ryan OW, Donnelly MK, Arkin AP, Taylor JW, Cate JHD. Engineering Kluyveromyces marxianus as a Robust Synthetic Biology Platform Host. Mbio. 9. PMID 30254120 DOI: 10.1128/Mbio.01410-18  0.569
2018 Gao C, Montoya L, Xu L, Madera M, Hollingsworth J, Purdom E, Hutmacher RB, Dahlberg JA, Coleman-Derr D, Lemaux PG, Taylor JW. Strong succession in arbuscular mycorrhizal fungal communities. The Isme Journal. PMID 30171254 DOI: 10.1038/S41396-018-0264-0  0.61
2018 Misztal PK, Lymperopoulou DS, Adams R, Scott R, Lindow S, Bruns T, Taylor JW, Uehling J, Bonito G, Vilgalys R, Goldstein AH. Emission Factors of Microbial Volatile Organic Compounds from Environmental Bacteria and Fungi. Environmental Science & Technology. PMID 29947506 DOI: 10.1021/Acs.Est.8B00806  0.678
2018 Xu L, Naylor D, Dong Z, Simmons T, Pierroz G, Hixson KK, Kim YM, Zink EM, Engbrecht KM, Wang Y, Gao C, DeGraaf S, Madera MA, Sievert JA, Hollingsworth J, ... ... Taylor JW, et al. Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria. Proceedings of the National Academy of Sciences of the United States of America. PMID 29666229 DOI: 10.1073/Pnas.1717308115  0.546
2017 Bruns TD, Corradi N, Redecker D, Taylor JW, Öpik M. Glomeromycotina: what is a species and why should we care? The New Phytologist. PMID 29165821 DOI: 10.1111/Nph.14913  0.629
2017 Adams RI, Lymperopoulou DS, Misztal PK, De Cassia Pessotti R, Behie SW, Tian Y, Goldstein AH, Lindow SE, Nazaroff WW, Taylor JW, Traxler MF, Bruns TD. Microbes and associated soluble and volatile chemicals on periodically wet household surfaces. Microbiome. 5: 128. PMID 28950891 DOI: 10.1186/S40168-017-0347-6  0.526
2017 Taylor JW, Branco S, Gao C, Hann-Soden C, Montoya L, Sylvain I, Gladieux P. Sources of Fungal Genetic Variation and Associating It with Phenotypic Diversity. Microbiology Spectrum. 5. PMID 28936945 DOI: 10.1128/Microbiolspec.Funk-0057-2016  0.81
2017 Casadevall A, Freij JB, Hann-Soden C, Taylor J. Reply to Engelthaler and Meyer, "Furthering the Continental Drift Speciation Hypothesis in the Pathogenic Cryptococcus Species Complexes". Msphere. 2. PMID 28635996 DOI: 10.1128/mSphere.00242-17  0.8
2017 Casadevall A, Freij JB, Hann-Soden C, Taylor J. Continental Drift and Speciation of the Cryptococcus neoformans and Cryptococcus gattii Species Complexes. Msphere. 2. PMID 28435888 DOI: 10.1128/mSphere.00103-17  0.808
2017 Rosenthal LM, Larsson KH, Branco S, Chung JA, Glassman SI, Liao HL, Peay KG, Smith DP, Talbot JM, Taylor JW, Vellinga EC, Vilgalys R, Bruns TD. Survey of corticioid fungi in North American pinaceous forests reveals hyperdiversity, underpopulated sequence databases, and species that are potentially ectomycorrhizal. Mycologia. 109: 115-127. PMID 28402791 DOI: 10.1080/00275514.2017.1281677  0.815
2017 Levitis DA, Golan J, Pringle A, Taylor J. A century later, resolving Joseph Grinnell's “striking case of adventitious coloration” The Auk. 134: 551-552. DOI: 10.1642/Auk-17-36.1  0.761
2016 Branco S, Bi K, Liao HL, Gladieux P, Badouin H, Ellison CE, Nguyen NH, Vilgalys R, Peay KG, Taylor JW, Bruns TD. Continental-level population differentiation and environmental adaptation in the mushroom Suillus brevipes. Molecular Ecology. PMID 27761941 DOI: 10.1111/Mec.13892  0.811
2016 Hibbett D, Abarenkov K, Koljalg U, Opik M, Chai B, Cole JR, Wang Q, Crous PW, Robert VA, Helgason T, Herr J, Kirk P, Lueschow S, O'Donnell K, Nilsson H, ... ... Taylor JW, et al. Sequence-based classification and identification of Fungi. Mycologia. PMID 27760854 DOI: 10.3852/16-130  0.782
2016 Muñoz JF, Farrer RA, Desjardins CA, Gallo JE, Sykes S, Sakthikumar S, Misas E, Whiston EA, Bagagli E, Soares CM, Teixeira MM, Taylor JW, Clay OK, McEwen JG, Cuomo CA. Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides. Msphere. 1. PMID 27704050 DOI: 10.1128/mSphere.00213-16  0.84
2016 Zhang Y, Skaar I, Sulyok M, Liu X, Rao M, Taylor JW. The Microbiome and Metabolites in Fermented Pu-erh Tea as Revealed by High-Throughput Sequencing and Quantitative Multiplex Metabolite Analysis. Plos One. 11: e0157847. PMID 27337135 DOI: 10.1371/Journal.Pone.0157847  0.322
2016 Mendoza L, Taylor JW, Walker ED, Vilela R. Description of three novel Lagenidium (Oomycota) species causing infection in mammals. Revista Iberoamericana De Micologia. PMID 26924580 DOI: 10.1016/J.Riam.2015.07.005  0.337
2016 Bruns TD, Taylor JW. Comment on "Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism". Science (New York, N.Y.). 351: 826. PMID 26912889 DOI: 10.1126/Science.Aad4228  0.584
2016 Taylor JW, Göker M, Pitt JI. Choosing one name for pleomorphic fungi: The example of Aspergillus versus Eurotium, Neosartorya and Emericella Taxon. 65: 593-601. DOI: 10.12705/653.10  0.372
2015 Whiston E, Taylor JW. Comparative Phylogenomics of Pathogenic and Non-pathogenic Species. G3 (Bethesda, Md.). PMID 26613950 DOI: 10.1534/G3.115.022806  0.829
2015 Gladieux P, Wilson BA, Perraudeau F, Montoya LA, Kowbel D, Hann-Soden C, Fischer M, Sylvain I, Jacobson DJ, Taylor JW. Genomic Sequencing Reveals Historical, Demographic, and Selective Factors Associated with the Diversification of the Fire-Associated Fungus Neurospora discreta. Molecular Ecology. PMID 26453896 DOI: 10.1111/Mec.13417  0.825
2015 Muñoz JF, Gauthier GM, Desjardins CA, Gallo JE, Holder J, Sullivan TD, Marty AJ, Carmen JC, Chen Z, Ding L, Gujja S, Magrini V, Misas E, Mitreva M, Priest M, ... ... Taylor JW, et al. The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia. Plos Genetics. 11: e1005493. PMID 26439490 DOI: 10.1371/Journal.Pgen.1005493  0.833
2015 Adams RI, Tian Y, Taylor JW, Bruns TD, Hyvärinen A, Täubel M. Passive dust collectors for assessing airborne microbial material. Microbiome. 3: 46. PMID 26434807 DOI: 10.1186/S40168-015-0112-7  0.554
2015 Taylor JW, Hann-Soden C, Branco S, Sylvain I, Ellison CE. Clonal reproduction in fungi. Proceedings of the National Academy of Sciences of the United States of America. 112: 8901-8. PMID 26195774 DOI: 10.1073/Pnas.1503159112  0.792
2015 Adam RI, Bhangar S, Pasut W, Arens EA, Taylor JW, Lindow SE, Nazaroff WW, Bruns TD. Correction: Chamber Bioaerosol Study: Outdoor Air and Human Occupants as Sources of Indoor Airborne Microbes. Plos One. 10: e0133221. PMID 26173129 DOI: 10.1371/Journal.Pone.0133221  0.511
2015 Wang Y, Smith KM, Taylor JW, Freitag M, Stajich JE. Endogenous Small RNA Mediates Meiotic Silencing of a Novel DNA Transposon. G3 (Bethesda, Md.). PMID 26109355 DOI: 10.1534/G3.115.017921  0.652
2015 Adams RI, Bhangar S, Pasut W, Arens EA, Taylor JW, Lindow SE, Nazaroff WW, Bruns TD. Chamber bioaerosol study: outdoor air and human occupants as sources of indoor airborne microbes. Plos One. 10: e0128022. PMID 26024222 DOI: 10.1371/Journal.Pone.0128022  0.554
2015 Shrestha P, Ibáñez AB, Bauer S, Glassman SI, Szaro TM, Bruns TD, Taylor JW. Fungi isolated from Miscanthus and sugarcane: biomass conversion, fungal enzymes, and hydrolysis of plant cell wall polymers. Biotechnology For Biofuels. 8: 38. PMID 25784958 DOI: 10.1186/S13068-015-0221-3  0.688
2015 Branco S, Gladieux P, Ellison CE, Kuo A, LaButti K, Lipzen A, Grigoriev IV, Liao HL, Vilgalys R, Peay KG, Taylor JW, Bruns TD. Genetic isolation between two recently diverged populations of a symbiotic fungus. Molecular Ecology. 24: 2747-58. PMID 25728665 DOI: 10.1111/Mec.13132  0.823
2015 Bhangar S, Adams RI, Pasut W, Huffman JA, Arens EA, Taylor JW, Bruns TD, Nazaroff WW. Chamber bioaerosol study: human emissions of size-resolved fluorescent biological aerosol particles. Indoor Air. PMID 25704637 DOI: 10.1111/Ina.12195  0.508
2015 Glassman SI, Peay KG, Talbot JM, Smith DP, Chung JA, Taylor JW, Vilgalys R, Bruns TD. A continental view of pine-associated ectomycorrhizal fungal spore banks: a quiescent functional guild with a strong biogeographic pattern. The New Phytologist. 205: 1619-31. PMID 25557275 DOI: 10.1111/Nph.13240  0.786
2015 Natvig DO, Taylor JW, Tsang A, Hutchinson MI, Powell AJ. Mycothermus thermophilus gen. et comb. nov., a new home for the itinerant thermophile Scytalidium thermophilum (Torula thermophila). Mycologia. 107: 319-27. PMID 25550298 DOI: 10.3852/13-399  0.805
2015 de Hoog GS, Chaturvedi V, Denning DW, Dyer PS, Frisvad JC, Geiser D, Gräser Y, Guarro J, Haase G, Kwon-Chung KJ, Meis JF, Meyer W, Pitt JI, Samson RA, Taylor JW, et al. Name changes in medically important fungi and their implications for clinical practice. Journal of Clinical Microbiology. 53: 1056-62. PMID 25297326 DOI: 10.1128/Jcm.02016-14  0.561
2015 Adam RI, Bhangar S, Pasut W, Arens EA, Taylor JW, Lindow SE, Nazaroff WW, Bruns TD. Correction: Chamber bioaerosol study: Outdoor air and human occupants as sources of indoor airborne microbes Plos One. 10. DOI: 10.1371/journal.pone.0133221  0.45
2015 Taylor JW, Hann-Soden C, Branco S, Sylvain I, Ellison CE. Clonal reproduction in fungi Proceedings of the National Academy of Sciences of the United States of America. 112: 8901-8908. DOI: 10.1073/pnas.1503159112  0.772
2014 Taylor JW. Evolutionary Perspectives on Human Fungal Pathogens. Cold Spring Harbor Perspectives in Medicine. PMID 25384770 DOI: 10.1101/Cshperspect.A019588  0.494
2014 Liao HL, Chen Y, Bruns TD, Peay KG, Taylor JW, Branco S, Talbot JM, Vilgalys R. Metatranscriptomic analysis of ectomycorrhizal roots reveals genes associated with Piloderma-Pinus symbiosis: improved methodologies for assessing gene expression in situ. Environmental Microbiology. 16: 3730-42. PMID 25186788 DOI: 10.1111/1462-2920.12619  0.795
2014 Pitt JI, Taylor JW. Aspergillus, its sexual states and the new International Code of Nomenclature. Mycologia. 106: 1051-62. PMID 24871603 DOI: 10.3852/14-060  0.329
2014 Corcoran P, Dettman JR, Sun Y, Luque EM, Corrochano LM, Taylor JW, Lascoux M, Johannesson H. A global multilocus analysis of the model fungus Neurospora reveals a single recent origin of a novel genetic system. Molecular Phylogenetics and Evolution. 78: 136-47. PMID 24845789 DOI: 10.1016/J.Ympev.2014.05.007  0.783
2014 Talbot JM, Bruns TD, Taylor JW, Smith DP, Branco S, Glassman SI, Erlandson S, Vilgalys R, Liao HL, Smith ME, Peay KG. Endemism and functional convergence across the North American soil mycobiome. Proceedings of the National Academy of Sciences of the United States of America. 111: 6341-6. PMID 24733885 DOI: 10.1073/Pnas.1402584111  0.772
2014 Ellison CE, Kowbel D, Glass NL, Taylor JW, Brem RB. Discovering functions of unannotated genes from a transcriptome survey of wild fungal isolates. Mbio. 5: e01046-13. PMID 24692637 DOI: 10.1128/Mbio.01046-13  0.725
2014 Adams RI, Miletto M, Lindow SE, Taylor JW, Bruns TD. Airborne bacterial communities in residences: similarities and differences with fungi. Plos One. 9: e91283. PMID 24603548 DOI: 10.1371/Journal.Pone.0091283  0.585
2014 Whiston E, Taylor JW. Genomics in Coccidioides: insights into evolution, ecology, and pathogenesis. Medical Mycology. 52: 149-55. PMID 24576996 DOI: 10.1093/Mmy/Myt001  0.844
2014 Johannesson H, Townsend J, Taylor J. Concerted evolution of repeat units within the gene encoding an immunomodulating parasitic cell surface glycoprotein in the human pathogenic fungi Coccidioides immitis and C. posadasii F1000research. 5. DOI: 10.7490/F1000Research.1096506.1  0.548
2014 Adams RI, Bhangar S, Pasut W, Arens E, Taylor JW, Lindow SE, Huffman JA, Nazaroff WW, Bruns TD. Characterizing microbes in occupied spaces: Environmental chamber study of human emission factors Indoor Air 2014 - 13th International Conference On Indoor Air Quality and Climate. 185-188.  0.46
2013 Adams RI, Miletto M, Taylor JW, Bruns TD. The diversity and distribution of fungi on residential surfaces. Plos One. 8: e78866. PMID 24223861 DOI: 10.1371/Journal.Pone.0078866  0.561
2013 Palma-Guerrero J, Hall CR, Kowbel D, Welch J, Taylor JW, Brem RB, Glass NL. Genome wide association identifies novel loci involved in fungal communication. Plos Genetics. 9: e1003669. PMID 23935534 DOI: 10.1371/Journal.Pgen.1003669  0.398
2013 Adams RI, Amend AS, Taylor JW, Bruns TD. A unique signal distorts the perception of species richness and composition in high-throughput sequencing surveys of microbial communities: a case study of fungi in indoor dust. Microbial Ecology. 66: 735-41. PMID 23880792 DOI: 10.1007/S00248-013-0266-4  0.597
2013 Wise HZ, Hung CY, Whiston E, Taylor JW, Cole GT. Extracellular ammonia at sites of pulmonary infection with Coccidioides posadasii contributes to severity of the respiratory disease. Microbial Pathogenesis. 59: 19-28. PMID 23583291 DOI: 10.1016/J.Micpath.2013.04.003  0.782
2013 Adams RI, Miletto M, Taylor JW, Bruns TD. Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances. The Isme Journal. 7: 1262-73. PMID 23426013 DOI: 10.1038/Ismej.2013.28  0.557
2013 Hibbett DS, Taylor JW. Fungal systematics: is a new age of enlightenment at hand? Nature Reviews. Microbiology. 11: 129-33. PMID 23288349 DOI: 10.1038/Nrmicro2963  0.339
2013 Adams RI, Miletto M, Taylor JW, Bruns TD. Predictive factors of fungal community composition on surfaces within residential apartments. Plos One. DOI: 10.1371/Journal.Pone.0078866.T002  0.506
2012 Corcoran P, Jacobson DJ, Bidartondo MI, Hickey PC, Kerekes JF, Taylor JW, Johannesson H. Quantifying functional heterothallism in the pseudohomothallic ascomycete Neurospora tetrasperma. Fungal Biology. 116: 962-75. PMID 22954339 DOI: 10.1016/J.Funbio.2012.06.006  0.73
2012 Whiston E, Zhang Wise H, Sharpton TJ, Jui G, Cole GT, Taylor JW. Comparative transcriptomics of the saprobic and parasitic growth phases in Coccidioides spp. Plos One. 7: e41034. PMID 22911737 DOI: 10.1371/Journal.Pone.0041034  0.791
2012 Muñoz JF, Gallo JE, Whiston E, Misas E, Taylor JW, McEwen JG, Clay OK. Comparative genome analyses of Paracoccidioides brasiliensis and its non-pathogenic relatives Emmonsia parva and Emmonsia crescens F1000research. 3. DOI: 10.7490/F1000Research.1091932.1  0.798
2011 Hawksworth DL, Crous PW, Redhead SA, Reynolds DR, Samson RA, Seifert KA, Taylor JW, Wingfield MJ, Abaci O, Aime C, Asan A, Bai FY, de Beer ZW, Begerow D, Berikten D, et al. The amsterdam declaration on fungal nomenclature. Ima Fungus. 2: 105-12. PMID 22679594 DOI: 10.5598/imafungus.2011.02.01.14  0.574
2011 Gilbert LB, Kasuga T, Glass NL, Taylor JW. Array CGH phylogeny: how accurate are comparative genomic hybridization-based trees? Bmc Genomics. 12: 487. PMID 21978207 DOI: 10.1186/1471-2164-12-487  0.815
2011 Roper M, Ellison C, Taylor JW, Glass NL. Nuclear and genome dynamics in multinucleate ascomycete fungi. Current Biology : Cb. 21: R786-93. PMID 21959169 DOI: 10.1016/J.Cub.2011.06.042  0.745
2011 Gilbert LB, Chae L, Kasuga T, Taylor JW. Array Comparative Genomic Hybridizations: assessing the ability to recapture evolutionary relationships using an in silico approach. Bmc Genomics. 12: 456. PMID 21936922 DOI: 10.1186/1471-2164-12-456  0.822
2011 Turner E, Jacobson DJ, Taylor JW. Genetic architecture of a reinforced, postmating, reproductive isolation barrier between Neurospora species indicates evolution via natural selection. Plos Genetics. 7: e1002204. PMID 21876674 DOI: 10.1371/Journal.Pgen.1002204  0.554
2011 Ellison CE, Stajich JE, Jacobson DJ, Natvig DO, Lapidus A, Foster B, Aerts A, Riley R, Lindquist EA, Grigoriev IV, Taylor JW. Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma. Genetics. 189: 55-69. PMID 21750257 DOI: 10.1534/Genetics.111.130690  0.799
2011 Muszewska A, Taylor JW, Szczesny P, Grynberg M. Independent subtilases expansions in fungi associated with animals. Molecular Biology and Evolution. 28: 3395-404. PMID 21727238 DOI: 10.1093/Molbev/Msr176  0.39
2011 Shrestha P, Szaro TM, Bruns TD, Taylor JW. Systematic search for cultivatable fungi that best deconstruct cell walls of Miscanthus and sugarcane in the field. Applied and Environmental Microbiology. 77: 5490-504. PMID 21685162 DOI: 10.1128/Aem.02996-10  0.707
2011 Ellison CE, Hall C, Kowbel D, Welch J, Brem RB, Glass NL, Taylor JW. Population genomics and local adaptation in wild isolates of a model microbial eukaryote. Proceedings of the National Academy of Sciences of the United States of America. 108: 2831-6. PMID 21282627 DOI: 10.1073/Pnas.1014971108  0.737
2011 Hawksworth DL, Crous PW, Redhead SA, Reynolds DR, Samson RA, Seifert KA, Taylor JW, Wingfield MJ, Thrane U, Frisvad JC, Signatories. 2. The Amsterdam Declaration on fungal nomenclature Mycotaxon. 116: 491-500. DOI: 10.5248/116.491  0.302
2011 Taylor JW. The poetry of mycological accomplishment and challenge Fungal Biology Reviews. 25: 3-13. DOI: 10.1016/J.Fbr.2011.01.005  0.392
2010 Taylor JW, Ellison CE. Mushrooms: morphological complexity in the fungi. Proceedings of the National Academy of Sciences of the United States of America. 107: 11655-6. PMID 20571118 DOI: 10.1073/Pnas.1006430107  0.7
2010 Turner E, Jacobson DJ, Taylor JW. Reinforced postmating reproductive isolation barriers in Neurospora, an Ascomycete microfungus. Journal of Evolutionary Biology. 23: 1642-56. PMID 20546092 DOI: 10.1111/J.1420-9101.2010.02030.X  0.546
2010 Neafsey DE, Barker BM, Sharpton TJ, Stajich JE, Park DJ, Whiston E, Hung CY, McMahan C, White J, Sykes S, Heiman D, Young S, Zeng Q, Abouelleil A, Aftuck L, ... ... Taylor JW, et al. Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control. Genome Research. 20: 938-46. PMID 20516208 DOI: 10.1101/Gr.103911.109  0.831
2010 Berbee ML, Taylor JW. Dating the molecular clock in fungi - how close are we? Fungal Biology Reviews. 24: 1-16. DOI: 10.1016/J.Fbr.2010.03.001  0.615
2009 Villalta CF, Jacobson DJ, Taylor JW. Three new phylogenetic and biological Neurospora species: N. hispaniola, N. metzenbergii and N. perkinsii. Mycologia. 101: 777-89. PMID 19927744 DOI: 10.3852/08-219  0.801
2009 Stajich JE, Berbee ML, Blackwell M, Hibbett DS, James TY, Spatafora JW, Taylor JW. The fungi. Current Biology : Cb. 19: R840-5. PMID 19788875 DOI: 10.1016/J.Cub.2009.07.004  0.817
2009 Sharpton TJ, Stajich JE, Rounsley SD, Gardner MJ, Wortman JR, Jordar VS, Maiti R, Kodira CD, Neafsey DE, Zeng Q, Hung CY, McMahan C, Muszewska A, Grynberg M, Mandel MA, ... ... Taylor JW, et al. Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. Genome Research. 19: 1722-31. PMID 19717792 DOI: 10.1101/Gr.087551.108  0.746
2009 James TY, Litvintseva AP, Vilgalys R, Morgan JA, Taylor JW, Fisher MC, Berger L, Weldon C, du Preez L, Longcore JE. Rapid global expansion of the fungal disease chytridiomycosis into declining and healthy amphibian populations. Plos Pathogens. 5: e1000458. PMID 19478871 DOI: 10.1371/Journal.Ppat.1000458  0.816
2009 Vilela R, Rosa PS, Belone AF, Taylor JW, Diório SM, Mendoza L. Molecular phylogeny of animal pathogen Lacazia loboi inferred from rDNA and DNA coding sequences. Mycological Research. 113: 851-7. PMID 19439181 DOI: 10.1016/J.Mycres.2009.04.007  0.372
2008 Carrero LL, Niño-Vega G, Teixeira MM, Carvalho MJ, Soares CM, Pereira M, Jesuino RS, McEwen JG, Mendoza L, Taylor JW, Felipe MS, San-Blas G. New Paracoccidioides brasiliensis isolate reveals unexpected genomic variability in this human pathogen. Fungal Genetics and Biology : Fg & B. 45: 605-12. PMID 18364259 DOI: 10.1016/J.Fgb.2008.02.002  0.423
2008 Bruns TD, Blackwell M, Edwards I, Taylor AFS, Horton T, Zhang N, Kõljalg U, May G, Kuyper TW, Bever JD, Gilbert G, Taylor JW, DeSantis TZ, Pringle A, Borneman J, et al. Preserving accuracy in GenBank Science. 319: 1616. PMID 18356505 DOI: 10.1126/Science.319.5870.1616A  0.748
2008 Sharpton TJ, Neafsey DE, Galagan JE, Taylor JW. Mechanisms of intron gain and loss in Cryptococcus. Genome Biology. 9: R24. PMID 18234113 DOI: 10.1186/Gb-2008-9-1-R24  0.652
2008 Baker SE, Thykaer J, Adney WS, Brettin TS, Brockman FJ, D'haeseleer P, Martinez AD, Miller RM, Rokhsar DS, Schadt CW, Torok T, Tuskan G, Bennett J, Berka RM, Briggs SP, ... ... Taylor J, et al. Fungal genome sequencing and bioenergy Fungal Biology Reviews. 22: 1-5. DOI: 10.1016/J.Fbr.2008.03.001  0.394
2007 Morgan JA, Vredenburg VT, Rachowicz LJ, Knapp RA, Stice MJ, Tunstall T, Bingham RE, Parker JM, Longcore JE, Moritz C, Briggs CJ, Taylor JW. Population genetics of the frog-killing fungus Batrachochytrium dendrobatidis. Proceedings of the National Academy of Sciences of the United States of America. 104: 13845-50. PMID 17693553 DOI: 10.1073/Pnas.0701838104  0.693
2007 Berbee ML, Taylor JW. Rhynie chert: a window into a lost world of complex plant-fungus interactions. The New Phytologist. 174: 475-9. PMID 17447903 DOI: 10.1111/J.1469-8137.2007.02080.X  0.572
2007 Taylor JW, Turner E, Pringle A, Dettman J, Johannesson H. Fungal species: Thoughts on their recognition, maintenance and selection Fungi in the Environment. 313-339. DOI: 10.1017/CBO9780511541797.016  0.799
2006 Taylor JW, Berbee ML. Dating divergences in the Fungal Tree of Life: review and new analyses. Mycologia. 98: 838-49. PMID 17486961 DOI: 10.3852/Mycologia.98.6.838  0.639
2006 Blackwell M, Hibbett DS, Taylor JW, Spatafora JW. Research Coordination Networks: a phylogeny for kingdom Fungi (Deep Hypha). Mycologia. 98: 829-37. PMID 17486960 DOI: 10.3852/Mycologia.98.6.829  0.333
2006 Jacobson DJ, Dettman JR, Adams RI, Boesl C, Sultana S, Roenneberg T, Merrow M, Duarte M, Marques I, Ushakova A, Carneiro P, Videira A, Navarro-Sampedro L, Olmedo M, Corrochano LM, Taylor JW, et al. New findings of Neurospora in Europe and comparisons of diversity in temperate climates on continental scales. Mycologia. 98: 550-9. PMID 17139848 DOI: 10.3852/Mycologia.98.4.550  0.711
2006 Taylor JW, Turner E, Townsend JP, Dettman JR, Jacobson D. Eukaryotic microbes, species recognition and the geographic limits of species: examples from the kingdom Fungi. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 361: 1947-63. PMID 17062413 DOI: 10.1098/Rstb.2006.1923  0.814
2006 James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox CJ, Celio G, Gueidan C, Fraker E, Miadlikowska J, Lumbsch HT, Rauhut A, Reeb V, Arnold AE, Amtoft A, ... ... Taylor JW, et al. Reconstructing the early evolution of Fungi using a six-gene phylogeny. Nature. 443: 818-22. PMID 17051209 DOI: 10.1038/Nature05110  0.815
2006 Dettman JR, Jacobson DJ, Taylor JW. Multilocus sequence data reveal extensive phylogenetic species diversity within the Neurospora discreta complex. Mycologia. 98: 436-46. PMID 17040072 DOI: 10.3852/Mycologia.98.3.436  0.749
2006 Aa E, Townsend JP, Adams RI, Nielsen KM, Taylor JW. Population structure and gene evolution in Saccharomyces cerevisiae. Fems Yeast Research. 6: 702-15. PMID 16879422 DOI: 10.1111/J.1567-1364.2006.00059.X  0.639
2006 Matute DR, Sepulveda VE, Quesada LM, Goldman GH, Taylor JW, Restrepo A, McEwen JG. Microsatellite analysis of three phylogenetic species of Paracoccidioides brasiliensis. Journal of Clinical Microbiology. 44: 2153-7. PMID 16757613 DOI: 10.1128/Jcm.02540-05  0.433
2006 Johannesson H, Kasuga T, Schaller RA, Good B, Gardner MJ, Townsend JP, Cole GT, Taylor JW. Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii. Fungal Genetics and Biology : Fg & B. 43: 545-59. PMID 16697669 DOI: 10.1016/J.Fgb.2006.02.003  0.798
2006 Matute DR, McEwen JG, Puccia R, Montes BA, San-Blas G, Bagagli E, Rauscher JT, Restrepo A, Morais F, Niño-Vega G, Taylor JW. Cryptic speciation and recombination in the fungus Paracoccidioides brasiliensis as revealed by gene genealogies. Molecular Biology and Evolution. 23: 65-73. PMID 16151188 DOI: 10.1093/Molbev/Msj008  0.428
2005 Kasuga T, Townsend JP, Tian C, Gilbert LB, Mannhaupt G, Taylor JW, Glass NL. Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination. Nucleic Acids Research. 33: 6469-85. PMID 16287898 DOI: 10.1093/Nar/Gki953  0.782
2005 Pringle A, Baker DM, Platt JL, Wares JP, Latgé JP, Taylor JW. Cryptic speciation in the cosmopolitan and clonal human pathogenic fungus Aspergillus fumigatus. Evolution; International Journal of Organic Evolution. 59: 1886-99. PMID 16261727 DOI: 10.1111/J.0014-3820.2005.Tb01059.X  0.681
2005 Whitaker RJ, Grogan DW, Taylor JW. Recombination shapes the natural population structure of the hyperthermophilic archaeon Sulfolobus islandicus. Molecular Biology and Evolution. 22: 2354-61. PMID 16093568 DOI: 10.1093/Molbev/Msi233  0.669
2005 Johannesson H, Townsend JP, Hung CY, Cole GT, Taylor JW. Concerted evolution in the repeats of an immunomodulating cell surface protein, SOWgp, of the human pathogenic fungi Coccidioides immitis and C. posadasii. Genetics. 171: 109-17. PMID 15965255 DOI: 10.1534/Genetics.105.040923  0.733
2005 Townsend JP, Taylor JW. Designing experiments using spotted microarrays to detect gene regulation differences within and among species. Methods in Enzymology. 395: 597-617. PMID 15865986 DOI: 10.1016/S0076-6879(05)95031-3  0.593
2005 Rachowicz LJ, Hero JM, Alford RA, Taylor JW, Morgan JAT, Vredenburg VT, Collins JP, Briggs CJ. The novel and endemic pathogen hypotheses: Competing explanations for the origin of emerging infectious diseases of wildlife Conservation Biology. 19: 1441-1448. DOI: 10.1111/J.1523-1739.2005.00255.X  0.672
2005 Pawlowska TE, Taylor JW. Arbuscular mycorrhizal fungi: Hyphal fusion and multigenomic structure (reply) Nature. 433: E4-E4. DOI: 10.1038/Nature03295  0.712
2004 Jacobson DJ, Powell AJ, Dettman JR, Saenz GS, Barton MM, Hiltz MD, Dvorachek WH, Glass NL, Taylor JW, Natvig DO. Neurospora in temperate forests of western North America. Mycologia. 96: 66-74. PMID 21148830 DOI: 10.1080/15572536.2005.11832998  0.825
2004 Dettman JR, Taylor JW. Mutation and evolution of microsatellite loci in Neurospora. Genetics. 168: 1231-48. PMID 15579682 DOI: 10.1534/Genetics.104.029322  0.701
2004 Nascimento E, Martinez R, Lopes AR, de Souza Bernardes LA, Barco CP, Goldman MH, Taylor JW, McEwen JG, Nobrega MP, Nobrega FG, Goldman GH. Detection and selection of microsatellites in the genome of Paracoccidioides brasiliensis as molecular markers for clinical and epidemiological studies. Journal of Clinical Microbiology. 42: 5007-14. PMID 15528688 DOI: 10.1128/Jcm.42.11.5007-5014.2004  0.388
2004 Johannesson H, Vidal P, Guarro J, Herr RA, Cole GT, Taylor JW. Positive directional selection in the proline-rich antigen (PRA) gene among the human pathogenic fungi Coccidioides immitis, C. posadasii and their closest relatives. Molecular Biology and Evolution. 21: 1134-45. PMID 15034131 DOI: 10.1093/Molbev/Msh124  0.658
2004 Pawlowska TE, Taylor JW. Organization of genetic variation in individuals of arbuscular mycorrhizal fungi. Nature. 427: 733-7. PMID 14973485 DOI: 10.1038/Nature02290  0.727
2003 Andersen B, Nielsen KF, Thrane U, Szaro T, Taylor JW, Jarvis BB. Molecular and phenotypic descriptions of Stachybotrys chlorohalonata sp. nov. and two chemotypes of Stachybotrys chartarum found in water-damaged buildings. Mycologia. 95: 1227-38. PMID 21149024 DOI: 10.1080/15572536.2004.11833031  0.355
2003 Dettman JR, Jacobson DJ, Turner E, Pringle A, Taylor JW. Reproductive isolation and phylogenetic divergence in Neurospora: comparing methods of species recognition in a model eukaryote. Evolution; International Journal of Organic Evolution. 57: 2721-41. PMID 14761052 DOI: 10.1111/J.0014-3820.2003.Tb01515.X  0.818
2003 Dettman JR, Jacobson DJ, Taylor JW. A multilocus genealogical approach to phylogenetic species recognition in the model eukaryote Neurospora. Evolution; International Journal of Organic Evolution. 57: 2703-20. PMID 14761051 DOI: 10.1111/J.0014-3820.2003.Tb01514.X  0.74
2003 Kroken S, Glass NL, Taylor JW, Yoder OC, Turgeon BG. Phylogenomic analysis of type I polyketide synthase genes in pathogenic and saprobic ascomycetes. Proceedings of the National Academy of Sciences of the United States of America. 100: 15670-5. PMID 14676319 DOI: 10.1073/Pnas.2532165100  0.781
2003 Kasuga T, White TJ, Koenig G, McEwen J, Restrepo A, Castañeda E, Da Silva Lacaz C, Heins-Vaccari EM, De Freitas RS, Zancopé-Oliveira RM, Qin Z, Negroni R, Carter DA, Mikami Y, Tamura M, ... ... Taylor JW, et al. Phylogeography of the fungal pathogen Histoplasma capsulatum. Molecular Ecology. 12: 3383-401. PMID 14629354 DOI: 10.1046/J.1365-294X.2003.01995.X  0.814
2003 Taylor JW, Fisher MC. Fungal multilocus sequence typing--it's not just for bacteria. Current Opinion in Microbiology. 6: 351-6. PMID 12941403 DOI: 10.1016/S1369-5274(03)00088-2  0.634
2003 Whitaker RJ, Grogan DW, Taylor JW. Geographic barriers isolate endemic populations of hyperthermophilic archaea. Science (New York, N.Y.). 301: 976-8. PMID 12881573 DOI: 10.1126/Science.1086909  0.675
2003 Pringle A, Chen D, Taylor JW. Sexual Fecundity is Correlated to Size in the Lichenized Fungus Xanthoparmelia cumberlandia The Bryologist. 106: 221-225. DOI: 10.1639/0007-2745(2003)106[0221:Sficts]2.0.Co;2  0.599
2003 Medina M, Collins AG, Taylor JW, Valentine JW, Lipps JH, Amaral-Zettler L, Sogin ML. Phylogeny of Opisthokonta and the evolution of multicellularity and complexity in Fungi and Metazoa International Journal of Astrobiology. 2: 203-211. DOI: 10.1017/S1473550403001551  0.39
2002 Cruse M, Telerant R, Gallagher T, Lee T, Taylor JW. Cryptic species in Stachybotrys chartarum. Mycologia. 94: 814-22. PMID 21156555 DOI: 10.1080/15572536.2003.11833175  0.415
2002 Lobuglio KF, Taylor JW. Recombination and genetic differentiation in the mycorrhizal fungus Cenococcum geophilum Fr. Mycologia. 94: 772-80. PMID 21156551 DOI: 10.1080/15572536.2003.11833171  0.798
2002 Kasuga T, White TJ, Taylor JW. Estimation of nucleotide substitution rates in Eurotiomycete fungi. Molecular Biology and Evolution. 19: 2318-24. PMID 12446823 DOI: 10.1093/Oxfordjournals.Molbev.A004056  0.678
2002 Pringle A, Taylor J. The fitness of filamentous fungi. Trends in Microbiology. 10: 474-81. PMID 12377558 DOI: 10.1016/S0966-842X(02)02447-2  0.61
2002 Mendoza L, Taylor JW, Ajello L. The class mesomycetozoea: a heterogeneous group of microorganisms at the animal-fungal boundary. Annual Review of Microbiology. 56: 315-44. PMID 12142489 DOI: 10.1146/Annurev.Micro.56.012302.160950  0.338
2002 Fisher MC, Rannala B, Chaturvedi V, Taylor JW. Disease surveillance in recombining pathogens: multilocus genotypes identify sources of human Coccidioides infections. Proceedings of the National Academy of Sciences of the United States of America. 99: 9067-71. PMID 12084944 DOI: 10.1073/Pnas.132178099  0.546
2002 Högberg N, Kroken S, Thor G, Taylor JW. Reproductive mode and genetic variation suggest a North American origin of European Letharia vulpina. Molecular Ecology. 11: 1191-6. PMID 12074726 DOI: 10.1046/J.1365-294X.2002.01513.X  0.764
2002 Fisher MC, Koenig GL, White TJ, Taylor JW. Molecular and phenotypic description ofCoccidioides posadasiisp. nov., previously recognized as the non-California population ofCoccidioides immitis Mycologia. 94: 73-84. DOI: 10.1080/15572536.2003.11833250  0.559
2001 Kroken S, Taylor JW. Outcrossing and Recombination in the Lichenized Fungus Letharia Fungal Genetics and Biology. 34: 83-92. PMID 11686674 DOI: 10.1006/Fgbi.2001.1291  0.787
2001 Dettman JR, Harbinski FM, Taylor JW. Ascospore morphology is a poor predictor of the phylogenetic relationships of Neurospora and Gelasinospora. Fungal Genetics and Biology : Fg & B. 34: 49-61. PMID 11567551 DOI: 10.1006/Fgbi.2001.1289  0.729
2001 Carter DA, Taylor JW, Dechairo B, Burt A, Koenig GL, White TJ. Amplified single-nucleotide polymorphisms and a (GA)(n) microsatellite marker reveal genetic differentiation between populations of Histoplasma capsulatum from the Americas. Fungal Genetics and Biology : Fg & B. 34: 37-48. PMID 11567550 DOI: 10.1006/Fgbi.2001.1283  0.6
2001 Koufopanou V, Burt A, Szaro T, Taylor JW. Gene genealogies, cryptic species, and molecular evolution in the human pathogen Coccidioides immitis and relatives (Ascomycota, Onygenales). Molecular Biology and Evolution. 18: 1246-58. PMID 11420364 DOI: 10.1093/Oxfordjournals.Molbev.A003910  0.816
2001 Fisher MC, Koenig GL, White TJ, San-Blas G, Negroni R, Alvarez IG, Wanke B, Taylor JW. Biogeographic range expansion into South America by Coccidioides immitis mirrors New World patterns of human migration. Proceedings of the National Academy of Sciences of the United States of America. 98: 4558-62. PMID 11287648 DOI: 10.1073/Pnas.071406098  0.581
2001 Herr RA, Tarcha EJ, Taborda PR, Taylor JW, Ajello L, Mendoza L. Phylogenetic analysis of Lacazia loboi places this previously uncharacterized pathogen within the dimorphic Onygenales. Journal of Clinical Microbiology. 39: 309-14. PMID 11136789 DOI: 10.1128/Jcm.39.1.309-314.2001  0.421
2001 Kroken S, Taylor JW. A gene genealogical approach to recognize phylogenetic species boundaries in the lichenized fungus Letharia Mycologia. 93: 38-53. DOI: 10.1080/00275514.2001.12061278  0.785
2000 Geiser DM, Dorner JW, Horn BW, Taylor JW. The phylogenetics of mycotoxin and sclerotium production in Aspergillus flavus and Aspergillus oryzae. Fungal Genetics and Biology : Fg & B. 31: 169-79. PMID 11273679 DOI: 10.1006/Fgbi.2000.1215  0.6
2000 McEwen JG, Taylor JW, Carter D, Xu J, Felipe MS, Vilgalys R, Mitchell TG, Kasuga T, White T, Bui T, Soares CM. Molecular typing of pathogenic fungi. Medical Mycology. 38: 189-97. PMID 11204145 DOI: 10.1080/Mmy.38.S1.189.197  0.735
2000 Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS, Fisher MC. Phylogenetic species recognition and species concepts in fungi. Fungal Genetics and Biology : Fg & B. 31: 21-32. PMID 11118132 DOI: 10.1006/Fgbi.2000.1228  0.804
2000 Fisher MC, Koenig G, White TJ, Taylor JW. A test for concordance between the multilocus genealogies of genes and microsatellites in the pathogenic fungus Coccidioides immitis. Molecular Biology and Evolution. 17: 1164-74. PMID 10908636 DOI: 10.1093/Oxfordjournals.Molbev.A026399  0.597
2000 Greene DR, Koenig G, Fisher MC, Taylor JW. Soil Isolation and Molecular Identification of Coccidioides immitis Mycologia. 92: 406. DOI: 10.2307/3761498  0.554
2000 Kroken S, Taylor JW. Phylogenetic Species, Reproductive Mode, and Specificity of the Green AlgaTrebouxiaForming Lichens with the Fungal GenusLetharia The Bryologist. 103: 645-660. DOI: 10.1639/0007-2745(2000)103[0645:Psrmas]2.0.Co;2  0.785
2000 Fisher MC, Koenig GL, White TJ, Taylor JW. Pathogenic Clones versus Environmentally Driven Population Increase: Analysis of an Epidemic of the Human Fungal PathogenCoccidioides immitis Journal of Clinical Microbiology. 38: 807-813. DOI: 10.1128/Jcm.38.2.807-813.2000  0.584
1999 Taylor J, Jacobson D, Fisher M. THE EVOLUTION OF ASEXUAL FUNGI: Reproduction, Speciation and Classification Annual Review of Phytopathology. 37: 197-246. PMID 11701822 DOI: 10.1146/Annurev.Phyto.37.1.197  0.601
1999 Herr RA, Ajello L, Taylor JW, Arseculeratne SN, Mendoza L. Phylogenetic analysis of Rhinosporidium seeberi's 18S small-subunit ribosomal DNA groups this pathogen among members of the protoctistan Mesomycetozoa clade. Journal of Clinical Microbiology. 37: 2750-4. PMID 10449446 DOI: 10.1128/Jcm.37.9.2750-2754.1999  0.377
1999 Fisher MC, White TJ, Taylor JW. Primers for genotyping single nucleotide polymorphisms and microsatellites in the pathogenic fungus Coccidioides immitis. Molecular Ecology. 8: 1082-4. PMID 10434430 DOI: 10.1046/J.1365-294X.1999.00655_5.X  0.494
1999 Kasuga T, Taylor JW, White TJ. Phylogenetic Relationships of Varieties and Geographical Groups of the Human Pathogenic Fungus Histoplasma capsulatum Darling Journal of Clinical Microbiology. 37: 653-663. PMID 9986828 DOI: 10.1128/Jcm.37.3.653-663.1999  0.682
1999 Taylor JW, Geiser DM, Burt A, Koufopanou V. The evolutionary biology and population genetics underlying fungal strain typing. Clinical Microbiology Reviews. 12: 126-46. PMID 9880478 DOI: 10.1128/Cmr.12.1.126  0.807
1999 Saenz GS, Taylor JW. Phylogeny of the Erysiphales (powdery mildews) inferred from internal transcribed spacer ribosomal DNA sequences. Botany. 77: 150-168. DOI: 10.1139/Cjb-77-1-150  0.358
1999 Saenz GS, Taylor JW. Phylogenetic relationships of Meliola and Meliolina inferred from nuclear small subunit rRNA sequences Mycological Research. 103: 1049-1056. DOI: 10.1017/S0953756298008211  0.349
1999 Skouboe P, Frisvad JC, Taylor JW, Lauritsen D, Boysen M, Rossen L. Phylogenetic analysis of nucleotide sequences from the ITS region of terverticillate Penicillium species Fungal Biology. 103: 873-881. DOI: 10.1017/S0953756298007904  0.368
1998 Geiser DM, Pitt JI, Taylor JW. Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. Proceedings of the National Academy of Sciences of the United States of America. 95: 388-93. PMID 9419385 DOI: 10.1073/Pnas.95.1.388  0.631
1998 Geiser DM, Frisvad JC, Taylor JW. Evolutionary relationships in Aspergillus section Fumigati inferred from partial beta-tubulin and hydrophobin DNA sequences Mycologia. 90: 831-845. DOI: 10.1080/00275514.1998.12026977  0.639
1998 Geiser DM, Taylor JW, Ritchie KB, Smith GW. Cause of sea fan death in the West Indies Nature. 394: 137-138. DOI: 10.1038/28079  0.59
1997 Burt A, Dechairo BM, Koenig GL, Carter DA, White TJ, Taylor JW. Molecular markers reveal differentiation among isolates of Coccidioides immitis from California, Arizona and Texas. Molecular Ecology. 6: 781-6. PMID 9262014 DOI: 10.1046/J.1365-294X.1997.00245.X  0.576
1997 Carter DA, Burt A, Taylor JW, Koenig GL, Dechairo BM, White TJ. A set of electrophoretic molecular markers for strain typing and population genetic studies of Histoplasma capsulatum. Electrophoresis. 18: 1047-53. PMID 9237553 DOI: 10.1002/Elps.1150180703  0.579
1997 Koufopanou V, Burt A, Taylor JW. Concordance of gene genealogies reveals reproductive isolation in the pathogenic fungus Coccidioides immitis. Proceedings of the National Academy of Sciences of the United States of America. 94: 5478-82. PMID 9144263 DOI: 10.1073/Pnas.94.10.5478  0.804
1996 LoBuglio KF, Berbee ML, Taylor JW. Phylogenetic origins of the asexual mycorrhizal symbiont Cenococcum geophilum Fr. and other mycorrhizal fungi among the ascomycetes. Molecular Phylogenetics and Evolution. 6: 287-94. PMID 8899729 DOI: 10.1006/Mpev.1996.0077  0.662
1996 Carter DA, Burt A, Taylor JW, Koenig GL, White TJ. Clinical isolates of Histoplasma capsulatum from Indianapolis, Indiana, have a recombining population structure. Journal of Clinical Microbiology. 34: 2577-84. PMID 8880523 DOI: 10.1128/Jcm.34.10.2577-2584.1996  0.572
1996 Bowman BH, White TJ, Taylor JW. Human Pathogeneic Fungi and Their Close Nonpathogenic Relatives Molecular Phylogenetics and Evolution. 6: 89-96. PMID 8812309 DOI: 10.1006/Mpev.1996.0061  0.407
1996 Burt A, Carter DA, Koenig GL, White TJ, Taylor JW. Molecular markers reveal cryptic sex in the human pathogen Coccidioides immitis. Proceedings of the National Academy of Sciences of the United States of America. 93: 770-3. PMID 8570632 DOI: 10.1073/Pnas.93.2.770  0.598
1996 Spanggaard B, Skouboe P, Rossen L, Taylor JW. Phylogenetic relationships of the intercellular fish pathogenIchthyophonus hoferi and fungi, choanoflagellates and the rosette agent Marine Biology. 126: 109-115. DOI: 10.1007/Bf00571382  0.415
1995 Gargas A, DePriest PT, Taylor JW. Positions of multiple insertions in SSU rDNA of lichen-forming fungi. Molecular Biology and Evolution. 12: 208-218. PMID 7700150 DOI: 10.1093/Oxfordjournals.Molbev.A040199  0.742
1995 LoBuglio KF, Taylor JW. Phylogeny and PCR identification of the human pathogenic fungus Penicillium marneffei. Journal of Clinical Microbiology. 33: 85-89. PMID 7699073 DOI: 10.1128/Jcm.33.1.85-89.1995  0.382
1995 Gargas A, Taylor JW. Phylogeny of Discomycetes and early radiations of the apothecial Ascomycotina inferred from SSU rDNA sequence data. Experimental Mycology. 19: 7-15. PMID 7614369 DOI: 10.1006/Emyc.1995.1002  0.738
1995 Burt A, Carter DA, Koenig GL, White TJ, Taylor JW. A safe method of extracting DNA from Coccidioides immitis Fungal Genetics Reports. 42: 23. DOI: 10.4148/1941-4765.1335  0.482
1995 Swann EC, Taylor JW. Phylogenetic perspectives on basidiomycete systematics: evidence from the 18S rRNA gene Botany. 73: 862-868. DOI: 10.1139/B95-332  0.367
1995 Taylor JW. Making the Deuteromycota redundant: a practical integration of mitosporic and meiosporic fungi Botany. 73: 754-759. DOI: 10.1139/B95-319  0.333
1995 Berbee ML, Taylor JW. From 18S ribosomal sequence data to evolution of morphology among the fungi Canadian Journal of Botany. 73: 677-683. DOI: 10.1139/B95-310  0.665
1995 Swann EC, Taylor JW. Phylogenetic diversity of yeast-producing basidiomycetes Fungal Biology. 99: 1205-1210. DOI: 10.1016/S0953-7562(09)80280-3  0.434
1994 Mitchell TG, Freedman EZ, White TJ, Taylor JW. Unique oligonucleotide primers in PCR for identification of Cryptococcus neoformans. Journal of Clinical Microbiology. 32: 253-255. PMID 8126194 DOI: 10.1128/Jcm.32.1.253-255.1994  0.336
1994 Burt A, Carter DA, White TJ, Taylor JW. DNA sequencing with arbitrary primer pairs. Molecular Ecology. 3: 523-5. PMID 7952333 DOI: 10.1111/J.1365-294X.1994.Tb00131.X  0.58
1994 Saenz GS, Taylor JW, Gargas A. 18S rRNA gene sequences and supraordinal classification of the Erysiphales Mycologia. 86: 212-216. DOI: 10.1080/00275514.1994.12026397  0.73
1994 Lobuglio KF, Pitt JI, Taylor JW. Independent origins of the synnematous Penicillium species, P. duclauxii, P. clavigerum, and P. vulpinum, as assessed by two ribosomal DNA regions Fungal Biology. 98: 250-256. DOI: 10.1016/S0953-7562(09)80194-9  0.372
1993 Berbee ML, Taylor JW. Dating the evolutionary radiations of the true fungi Botany. 71: 1114-1127. DOI: 10.1139/B93-131  0.368
1993 Taylor JW, Bowman BH, Berbee ML, White TJ. Fungal Model Organisms: Phylogenetics of Saccharomyces, Aspergillus, and Neurospora Systematic Biology. 42: 440-457. DOI: 10.1093/Sysbio/42.4.440  0.354
1993 Swann EC, Taylor JW. Higher taxa of basidiomycetes: an 18S rRNA gene perspective Mycologia. 85: 923-936. DOI: 10.1080/00275514.1993.12026354  0.338
1993 LoBuglio KF, Pitt JI, Taylor JW. Phylogenetic Analysis of Two Ribosomal Dna Regions Indicates Multiple Independent Losses of a Sexual Talaromyces State Among Asexual Penicillium Species in Subgenus Biverticillium Mycologia. 85: 592-604. DOI: 10.1080/00275514.1993.12026313  0.322
1992 Lee SB, Taylor JW. Phylogeny of five fungus-like protoctistan Phytophthora species, inferred from the internal transcribed spacers of ribosomal DNA. Molecular Biology and Evolution. 9: 636-653. PMID 1630304 DOI: 10.1093/Oxfordjournals.Molbev.A040750  0.384
1992 Bowman BH, Taylor JW, Brownlee AG, Lee J, Lu SD, White TJ. Molecular evolution of the fungi: relationship of the Basidiomycetes, Ascomycetes, and Chytridiomycetes. Molecular Biology and Evolution. 9: 285-96. PMID 1560764 DOI: 10.1093/Oxfordjournals.Molbev.A040720  0.38
1992 Berbee ML, Taylor JW. Two ascomycete classes based on fruiting-body characters and ribosomal DNA sequence. Molecular Biology and Evolution. 9: 278-84. PMID 1560763 DOI: 10.1093/Oxfordjournals.Molbev.A040719  0.623
1992 Berbee ML, Kloeckener B, Taylor JW. Yeast biology. Science (New York, N.Y.). 257: 1610-1. PMID 1529345  0.566
1992 Bowman BH, Taylor JW, White TJ. Molecular evolution of the fungi: human pathogens. Molecular Biology and Evolution. 9: 893-904. PMID 1528111 DOI: 10.1093/Oxfordjournals.Molbev.A040766  0.392
1992 Berbee ML, Taylor JW. Convergence in ascospore discharge mechanism among pyrenomycete fungi based on 18S ribosomal RNA gene sequence. Molecular Phylogenetics and Evolution. 1: 59-71. PMID 1342925 DOI: 10.1016/1055-7903(92)90036-G  0.654
1992 Berbee ML, Taylor JW. Detecting morphological convergence in true fungi, using 18S rRNA gene sequence data. Bio Systems. 28: 117-25. PMID 1292657 DOI: 10.1016/0303-2647(92)90014-P  0.662
1992 Taylor J, Cockburn A. Masterly Coverage@@@An Introduction to Evolutionary Ecology. Journal of Biogeography. 19: 461. DOI: 10.2307/2845575  0.383
1992 Mitchell TG, White TJ, Taylor JW. Comparison of 5.8S ribosomal DNA sequences among the basidiomycetous yeast genera Cystofilobasidium, Filobasidium and Filobasidiella Medical Mycology. 30: 207-218. DOI: 10.1080/02681219280000271  0.337
1992 Gargas A, Taylor JW. Polymerase Chain Reaction (PCR) Primers for Amplifying and Sequencing Nuclear 18S rDNA from Lichenized Fungi Mycologia. 84: 589-592. DOI: 10.1080/00275514.1992.12026182  0.735
1992 Berbee ML, Taylor JW. 18S Ribosomal RNA gene sequence characters place the human pathogenSporothrix schenckii in the genusOphiostoma Experimental Mycology. 16: 87-91. DOI: 10.1016/0147-5975(92)90044-R  0.65
1991 Bruns TD, White TJ, Taylor JW. Fungal Molecular Systematics Annual Review of Ecology and Systematics. 22: 525-564. DOI: 10.1146/Annurev.Es.22.110191.002521  0.579
1991 Gardes M, White TJ, Fortin JA, Bruns TD, Taylor JW. Identification of indigenous and introduced symbiotic fungi in ectomycorrhizae by amplification of nuclear and mitochondrial ribosomal DNA Canadian Journal of Botany. 69: 180-190. DOI: 10.1139/B91-026  0.615
1990 Bruns TD, Fogel R, Taylor JW. Amplification and Sequencing of DNA from Fungal Herbarium Specimens Mycologia. 82: 175. DOI: 10.2307/3759846  0.558
1989 Taylor JW, Natvig DO. Mitochondrial DNA and evolution of heterothallic and pseudohomothallic Neurospora species Mycological Research. 93: 257-272. DOI: 10.1016/S0953-7562(89)80152-2  0.681
1988 Lee SB, Milgroom MG, Taylor JW. A rapid, high yield mini-prep method for isolation of total genomic DNA from fungi. Fungal Genetics Reports. 35: 23. DOI: 10.4148/1941-4765.1531  0.533
1987 Natvig DO, Jackson DA, Taylor JW. RANDOM-FRAGMENT HYBRIDIZATION ANALYSIS OF EVOLUTION IN THE GENUS NEUROSPORA: THE STATUS OF FOUR-SPORED STRAINS. Evolution; International Journal of Organic Evolution. 41: 1003-1021. PMID 28563413 DOI: 10.1111/J.1558-5646.1987.Tb05873.X  0.7
1986 Taylor JW, Smolich BD, May G. EVOLUTION AND MITOCHONDRIAL DNA IN NEUROSPORA CRASSA. Evolution; International Journal of Organic Evolution. 40: 716-739. PMID 28556147 DOI: 10.1111/J.1558-5646.1986.Tb00533.X  0.578
1985 Taylor JW, Smolich BD, May G. An evolutionary comparison of homologous mitochondrial plasmid DNAs from three Neurospora species Molecular Genetics and Genomics. 201: 161-167. PMID 3003521 DOI: 10.1007/Bf00425654  0.346
1985 Taylor JW, Smolich BD. Molecular cloning and physical mapping of the Neurospora crassa 74-OR23-1A mitochondrial genome. Current Genetics. 9: 597-603. PMID 2836095 DOI: 10.1007/Bf00381173  0.322
1980 Taylor JW, Fuller MS. Microtubules, organelle movement, and cross-wall formation at the sporangial-rhizoidal interface in the fungus, Chytridium confervae Protoplasma. 104: 201-221. DOI: 10.1007/Bf01279768  0.528
1979 Taylor JW, Wells K. Observations of Mitosis in Living Cells and Synchrony of Mitosis in Bullera alba Mycologia. 71: 502-519. DOI: 10.1080/00275514.1979.12021033  0.455
1979 Taylor JW, Wells K. The mitochondrion in mitotic and starved cells of Bullera alba Experimental Mycology. 3: 16-27. DOI: 10.1016/S0147-5975(79)80015-8  0.442
1975 Osborn G, Taylor J. Lichenometry on calcareous substrates in the Canadian Rockies Quaternary Research. 5: 111-120. DOI: 10.1016/0033-5894(75)90051-4  0.353
Show low-probability matches.