Keelnatham T. Shanmugam - Publications

Affiliations: 
University of Florida, Gainesville, Gainesville, FL, United States 
Area:
Microbiology Biology, Environmental Engineering
Website:
http://microcell.ufl.edu/people/faculty-directory/shanmugam/

149 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Chauliac D, Wang Q, St John F, Jones G, Hurlbert JC, Ingram LO, Shanmugam KT. Kinetic characterization and structure analysis of an altered polyol dehydrogenase with D-lactate dehydrogenase activity. Protein Science : a Publication of the Protein Society. PMID 33020946 DOI: 10.1002/pro.3963  0.6
2019 Shi A, Yomano LP, York SW, Zheng H, Shanmugam KT, Ingram LO. Chromosomal mutations in Escherichia coli that improve tolerance to nonvolatile side-products from dilute acid treatment of sugarcane bagasse. Biotechnology and Bioengineering. PMID 31612993 DOI: 10.1002/bit.27189  0.6
2019 Wang L, Chauliac D, Moritz BE, Zhang G, Ingram LO, Shanmugam KT. Metabolic engineering of for the production of butyric acid at high titer and productivity. Biotechnology For Biofuels. 12: 62. PMID 30949238 DOI: 10.1186/s13068-019-1408-9  0.6
2018 Wang L, York SW, Ingram LO, Shanmugam KT. Simultaneous fermentation of biomass-derived sugars to ethanol by a co-culture of an engineered Escherichia coli and Saccharomyces cerevisiae. Bioresource Technology. 273: 269-276. PMID 30448678 DOI: 10.1016/j.biortech.2018.11.016  0.6
2018 Wang L, Chauliac D, Rhee MS, Panneerselvam A, Ingram LO, Shanmugam KT. Fermentation of dihydroxyacetone by engineered and to products. Proceedings of the National Academy of Sciences of the United States of America. PMID 29632200 DOI: 10.1073/pnas.1801002115  0.6
2017 Wu W, Rondon V, Weeks K, Pullammanappallil P, Ingram LO, Shanmugam KT. Phosphoric acid based pretreatment of switchgrass and fermentation of entire slurry to ethanol using a simplified process. Bioresource Technology. 251: 171-180. PMID 29274857 DOI: 10.1016/j.biortech.2017.12.041  0.6
2017 Awasthi D, Rhee LWMS, Wang Q, Chauliac D, Ingram LO, Shanmugam KT. Metabolic Engineering of Bacillus subtilis for Production of D-Lactic acid. Biotechnology and Bioengineering. PMID 28986980 DOI: 10.1002/bit.26472  0.6
2016 Gubicza K, Nieves IU, Sagues WJ, Barta Z, Shanmugam KT, Ingram LO. Techno-economic analysis of ethanol production from sugarcane bagasse using a Liquefaction plus Simultaneous Saccharification and co-Fermentation process. Bioresource Technology. 208: 42-8. PMID 26918837 DOI: 10.1016/j.biortech.2016.01.093  0.96
2016 Shi A, Zheng H, Yomano LP, York SW, Shanmugam KT, Ingram LO. Plasmid expression of nemA and yafC* increased resistance of ethanologenic Escherichia coli LY180 to nonvolatile side products from dilute acid treatment of sugarcane bagasse and artificial hydrolysate. Applied and Environmental Microbiology. PMID 26826228 DOI: 10.1128/AEM.03488-15  0.96
2016 Ou MS, Awasthi D, Nieves I, Wang L, Erickson J, Vermerris W, Ingram LO, Shanmugam KT. Sweet Sorghum Juice and Bagasse as Feedstocks for the Production of Optically Pure Lactic Acid by Native and Engineered Bacillus coagulans Strains Bioenergy Research. 9: 123-131. DOI: 10.1007/s12155-015-9670-6  0.96
2015 Wang L, Ou MS, Nieves I, Erickson JE, Vermerris W, Ingram LO, Shanmugam KT. Fermentation of sweet sorghum derived sugars to butyric acid at high titer and productivity by a moderate thermophile Clostridium thermobutyricum at 50°C. Bioresource Technology. 198: 533-539. PMID 26432057 DOI: 10.1016/j.biortech.2015.09.062  0.96
2015 Chauliac D, Pullammanappallil PC, Ingram LO, Shanmugam KT. Removing chiral contamination of lactate solutions by selective metabolism of the D-enantiomer. Biotechnology Letters. 37: 2411-8. PMID 26272390 DOI: 10.1007/s10529-015-1924-z  0.96
2015 Sawisit A, Jantama K, Zheng H, Yomano LP, York SW, Shanmugam KT, Ingram LO. Mutation in galP improved fermentation of mixed sugars to succinate using engineered Escherichia coli AS1600a and AM1 mineral salts medium. Bioresource Technology. 193: 433-41. PMID 26159300 DOI: 10.1016/j.biortech.2015.06.108  0.6
2015 Geddes R, Shanmugam KT, Ingram LO. Combining treatments to improve the fermentation of sugarcane bagasse hydrolysates by ethanologenic Escherichia coli LY180. Bioresource Technology. 189: 15-22. PMID 25864026 DOI: 10.1016/j.biortech.2015.03.141  0.96
2015 Sawisit A, Jantama K, Zheng H, Yomano LP, York SW, Shanmugam KT, Ingram LO. Mutation in galP improved fermentation of mixed sugars to succinate using engineered Escherichia coli AS1600a and AM1 mineral salts medium Bioresource Technology. 193: 433-441. DOI: 10.1016/j.biortech.2015.06.108  0.96
2014 Geddes RD, Wang X, Yomano LP, Miller EN, Zheng H, Shanmugam KT, Ingram LO. Polyamine transporters and polyamines increase furfural tolerance during xylose fermentation with ethanologenic Escherichia coli strain LY180. Applied and Environmental Microbiology. 80: 5955-64. PMID 25063650 DOI: 10.1128/AEM.01913-14  0.6
2013 Zheng H, Wang X, Yomano LP, Geddes RD, Shanmugam KT, Ingram LO. Improving Escherichia coli FucO for furfural tolerance by saturation mutagenesis of individual amino acid positions. Applied and Environmental Microbiology. 79: 3202-8. PMID 23475621 DOI: 10.1128/AEM.00149-13  0.96
2013 Wang X, Yomano LP, Lee JY, York SW, Zheng H, Mullinnix MT, Shanmugam KT, Ingram LO. Engineering furfural tolerance in Escherichia coli improves the fermentation of lignocellulosic sugars into renewable chemicals. Proceedings of the National Academy of Sciences of the United States of America. 110: 4021-6. PMID 23431191 DOI: 10.1073/pnas.1217958110  0.96
2013 Geddes CC, Mullinnix MT, Nieves IU, Hoffman RW, Sagues WJ, York SW, Shanmugam KT, Erickson JE, Vermerris WE, Ingram LO. Seed train development for the fermentation of bagasse from sweet sorghum and sugarcane using a simplified fermentation process. Bioresource Technology. 128: 716-24. PMID 23375156 DOI: 10.1016/j.biortech.2012.09.121  0.96
2012 Chow V, Nong G, St John FJ, Rice JD, Dickstein E, Chertkov O, Bruce D, Detter C, Brettin T, Han J, Woyke T, Pitluck S, Nolan M, Pati A, Martin J, ... ... Shanmugam KT, et al. Complete genome sequence of Paenibacillus sp. strain JDR-2. Standards in Genomic Sciences. 6: 1-10. PMID 22675593 DOI: 10.4056/sigs.2374349  0.96
2012 Zheng H, Wang X, Yomano LP, Shanmugam KT, Ingram LO. Increase in furfural tolerance in ethanologenic Escherichia coli LY180 by plasmid-based expression of thyA. Applied and Environmental Microbiology. 78: 4346-52. PMID 22504824 DOI: 10.1128/AEM.00356-12  0.96
2012 Sun Z, Do PM, Rhee MS, Govindasamy L, Wang Q, Ingram LO, Shanmugam KT. Amino acid substitutions at glutamate-354 in dihydrolipoamide dehydrogenase of Escherichia coli lower the sensitivity of pyruvate dehydrogenase to NADH. Microbiology (Reading, England). 158: 1350-8. PMID 22343352 DOI: 10.1099/mic.0.055590-0  0.96
2012 Wang X, Miller EN, Yomano LP, Shanmugam KT, Ingram LO. Increased furan tolerance in Escherichia coli due to a cryptic ucpA gene. Applied and Environmental Microbiology. 78: 2452-5. PMID 22267665 DOI: 10.1128/AEM.07783-11  0.96
2012 Turner PC, Yomano LP, Jarboe LR, York SW, Baggett CL, Moritz BE, Zentz EB, Shanmugam KT, Ingram LO. Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes. Journal of Industrial Microbiology & Biotechnology. 39: 629-39. PMID 22075923 DOI: 10.1007/s10295-011-1052-2  0.96
2011 Rhee MS, Moritz BE, Xie G, Glavina Del Rio T, Dalin E, Tice H, Bruce D, Goodwin L, Chertkov O, Brettin T, Han C, Detter C, Pitluck S, Land ML, Patel M, ... ... Shanmugam KT, et al. Complete Genome Sequence of a thermotolerant sporogenic lactic acid bacterium, Bacillus coagulans strain 36D1. Standards in Genomic Sciences. 5: 331-40. PMID 22675583 DOI: 10.4056/sigs.2365342  0.96
2011 Wang Q, Ingram LO, Shanmugam KT. Evolution of D-lactate dehydrogenase activity from glycerol dehydrogenase and its utility for D-lactate production from lignocellulose. Proceedings of the National Academy of Sciences of the United States of America. 108: 18920-5. PMID 22065761 DOI: 10.1073/pnas.1111085108  0.96
2011 Wang Q, Zhao X, Chamu J, Shanmugam KT. Isolation, characterization and evolution of a new thermophilic Bacillus licheniformis for lactic acid production in mineral salts medium. Bioresource Technology. 102: 8152-8. PMID 21704521 DOI: 10.1016/j.biortech.2011.06.003  0.96
2011 Wang X, Miller EN, Yomano LP, Zhang X, Shanmugam KT, Ingram LO. Increased furfural tolerance due to overexpression of NADH-dependent oxidoreductase FucO in Escherichia coli strains engineered for the production of ethanol and lactate. Applied and Environmental Microbiology. 77: 5132-40. PMID 21685167 DOI: 10.1128/AEM.05008-11  0.96
2011 Nieves IU, Geddes CC, Mullinnix MT, Hoffman RW, Tong Z, Castro E, Shanmugam KT, Ingram LO. Injection of air into the headspace improves fermentation of phosphoric acid pretreated sugarcane bagasse by Escherichia coli MM170 Bioresource Technology. 102: 6959-6965. PMID 21531547 DOI: 10.1016/j.biortech.2011.04.036  0.96
2011 Geddes CC, Mullinnix MT, Nieves IU, Peterson JJ, Hoffman RW, York SW, Yomano LP, Miller EN, Shanmugam KT, Ingram LO. Simplified process for ethanol production from sugarcane bagasse using hydrolysate-resistant Escherichia coli strain MM160. Bioresource Technology. 102: 2702-11. PMID 21111615 DOI: 10.1016/j.biortech.2010.10.143  0.96
2011 Zhang X, Wang X, Shanmugam KT, Ingram LO. L-malate production by metabolically engineered Escherichia coli. Applied and Environmental Microbiology. 77: 427-34. PMID 21097588 DOI: 10.1128/AEM.01971-10  0.96
2011 Ou MS, Ingram LO, Shanmugam KT. L: (+)-Lactic acid production from non-food carbohydrates by thermotolerant Bacillus coagulans. Journal of Industrial Microbiology & Biotechnology. 38: 599-605. PMID 20694852 DOI: 10.1007/s10295-010-0796-4  0.96
2011 Su Y, Rhee MS, Ingram LO, Shanmugam KT. Physiological and fermentation properties of Bacillus coagulans and a mutant lacking fermentative lactate dehydrogenase activity. Journal of Industrial Microbiology & Biotechnology. 38: 441-50. PMID 20677017 DOI: 10.1007/s10295-010-0788-4  0.96
2011 Turner PC, Miller EN, Jarboe LR, Baggett CL, Shanmugam KT, Ingram LO. YqhC regulates transcription of the adjacent Escherichia coli genes yqhD and dkgA that are involved in furfural tolerance. Journal of Industrial Microbiology & Biotechnology. 38: 431-9. PMID 20676725 DOI: 10.1007/s10295-010-0787-5  0.96
2010 Geddes CC, Peterson JJ, Mullinnix MT, Svoronos SA, Shanmugam KT, Ingram LO. Optimizing cellulase usage for improved mixing and rheological properties of acid-pretreated sugarcane bagasse. Bioresource Technology. 101: 9128-36. PMID 20678927 DOI: 10.1016/j.biortech.2010.07.040  0.96
2010 Jarboe LR, Zhang X, Wang X, Moore JC, Shanmugam KT, Ingram LO. Metabolic engineering for production of biorenewable fuels and chemicals: contributions of synthetic biology. Journal of Biomedicine & Biotechnology. 2010: 761042. PMID 20414363 DOI: 10.1155/2010/761042  0.96
2010 Zhang X, Shanmugam KT, Ingram LO. Fermentation of glycerol to succinate by metabolically engineered strains of Escherichia coli. Applied and Environmental Microbiology. 76: 2397-401. PMID 20154114 DOI: 10.1128/AEM.02902-09  0.96
2010 Wang Q, Ou MS, Kim Y, Ingram LO, Shanmugam KT. Metabolic flux control at the pyruvate node in an anaerobic Escherichia coli strain with an active pyruvate dehydrogenase. Applied and Environmental Microbiology. 76: 2107-14. PMID 20118372 DOI: 10.1128/AEM.02545-09  0.96
2010 Geddes CC, Peterson JJ, Roslander C, Zacchi G, Mullinnix MT, Shanmugam KT, Ingram LO. Optimizing the saccharification of sugar cane bagasse using dilute phosphoric acid followed by fungal cellulases. Bioresource Technology. 101: 1851-7. PMID 19880314 DOI: 10.1016/j.biortech.2009.09.070  0.96
2009 Zhang X, Jantama K, Moore JC, Jarboe LR, Shanmugam KT, Ingram LO. Metabolic evolution of energy-conserving pathways for succinate production in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 106: 20180-5. PMID 19918073 DOI: 10.1073/pnas.0905396106  0.96
2009 Zhang X, Jantama K, Shanmugam KT, Ingram LO. Reengineering Escherichia coli for Succinate Production in Mineral Salts Medium. Applied and Environmental Microbiology. 75: 7807-13. PMID 19837840 DOI: 10.1128/AEM.01758-09  0.96
2009 Miller EN, Jarboe LR, Turner PC, Pharkya P, Yomano LP, York SW, Nunn D, Shanmugam KT, Ingram LO. Furfural inhibits growth by limiting sulfur assimilation in ethanologenic Escherichia coli strain LY180. Applied and Environmental Microbiology. 75: 6132-41. PMID 19684179 DOI: 10.1128/AEM.01187-09  0.96
2009 Kajiya M, Sato K, Silva MJ, Ouhara K, Do PM, Shanmugam KT, Kawai T. Hydrogen from intestinal bacteria is protective for Concanavalin A-induced hepatitis. Biochemical and Biophysical Research Communications. 386: 316-21. PMID 19523450 DOI: 10.1016/j.bbrc.2009.06.024  0.96
2009 Yomano LP, York SW, Shanmugam KT, Ingram LO. Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli. Biotechnology Letters. 31: 1389-98. PMID 19458924 DOI: 10.1007/s10529-009-0011-8  0.96
2009 Miller EN, Jarboe LR, Yomano LP, York SW, Shanmugam KT, Ingram LO. Silencing of NADPH-dependent oxidoreductase genes (yqhD and dkgA) in furfural-resistant ethanologenic Escherichia coli. Applied and Environmental Microbiology. 75: 4315-23. PMID 19429550 DOI: 10.1128/AEM.00567-09  0.96
2009 Do PM, Angerhofer A, Hrdy I, Bardonova L, Ingram LO, Shanmugam KT. Engineering Escherichia coli for fermentative dihydrogen production: potential role of NADH-ferredoxin oxidoreductase from the hydrogenosome of anaerobic protozoa. Applied Biochemistry and Biotechnology. 153: 21-33. PMID 19172236 DOI: 10.1007/s12010-008-8508-5  0.96
2009 Ou MS, Mohammed N, Ingram LO, Shanmugam KT. Thermophilic Bacillus coagulans requires less cellulases for simultaneous saccharification and fermentation of cellulose to products than mesophilic microbial biocatalysts. Applied Biochemistry and Biotechnology. 155: 379-85. PMID 19156365 DOI: 10.1007/s12010-008-8509-4  0.96
2008 Jantama K, Zhang X, Moore JC, Shanmugam KT, Svoronos SA, Ingram LO. Eliminating side products and increasing succinate yields in engineered strains of Escherichia coli C. Biotechnology and Bioengineering. 101: 881-93. PMID 18781696 DOI: 10.1002/bit.22005  0.96
2008 Yomano LP, York SW, Zhou S, Shanmugam KT, Ingram LO. Re-engineering Escherichia coli for ethanol production. Biotechnology Letters. 30: 2097-103. PMID 18773150 DOI: 10.1007/s10529-008-9821-3  0.96
2008 Kim Y, Ingram LO, Shanmugam KT. Dihydrolipoamide dehydrogenase mutation alters the NADH sensitivity of pyruvate dehydrogenase complex of Escherichia coli K-12. Journal of Bacteriology. 190: 3851-8. PMID 18375566 DOI: 10.1128/JB.00104-08  0.96
2008 Shanmugam KT, Ingram LO. Engineering biocatalysts for production of commodity chemicals. Journal of Molecular Microbiology and Biotechnology. 15: 8-15. PMID 18349546 DOI: 10.1159/000111988  0.96
2008 Jantama K, Haupt MJ, Svoronos SA, Zhang X, Moore JC, Shanmugam KT, Ingram LO. Combining metabolic engineering and metabolic evolution to develop nonrecombinant strains of Escherichia coli C that produce succinate and malate. Biotechnology and Bioengineering. 99: 1140-53. PMID 17972330 DOI: 10.1002/bit.21694  0.96
2007 Zhang X, Jantama K, Moore JC, Shanmugam KT, Ingram LO. Production of L -alanine by metabolically engineered Escherichia coli. Applied Microbiology and Biotechnology. 77: 355-66. PMID 17874321 DOI: 10.1007/s00253-007-1170-y  0.96
2007 Kim Y, Ingram LO, Shanmugam KT. Construction of an Escherichia coli K-12 mutant for homoethanologenic fermentation of glucose or xylose without foreign genes. Applied and Environmental Microbiology. 73: 1766-71. PMID 17259366 DOI: 10.1128/AEM.02456-06  0.96
2007 Rhee MS, Kim JW, Qian Y, Ingram LO, Shanmugam KT. Development of plasmid vector and electroporation condition for gene transfer in sporogenic lactic acid bacterium, Bacillus coagulans. Plasmid. 58: 13-22. PMID 17215040 DOI: 10.1016/j.plasmid.2006.11.006  0.96
2007 Martinez A, Grabar TB, Shanmugam KT, Yomano LP, York SW, Ingram LO. Low salt medium for lactate and ethanol production by recombinant Escherichia coli B. Biotechnology Letters. 29: 397-404. PMID 17160622 DOI: 10.1007/s10529-006-9252-y  0.96
2006 Grabar TB, Zhou S, Shanmugam KT, Yomano LP, Ingram LO. Methylglyoxal bypass identified as source of chiral contamination in l(+) and d(-)-lactate fermentations by recombinant Escherichia coli. Biotechnology Letters. 28: 1527-35. PMID 16868860 DOI: 10.1007/s10529-006-9122-7  0.96
2006 Patel MA, Ou MS, Harbrucker R, Aldrich HC, Buszko ML, Ingram LO, Shanmugam KT. Isolation and characterization of acid-tolerant, thermophilic bacteria for effective fermentation of biomass-derived sugars to lactic acid. Applied and Environmental Microbiology. 72: 3228-35. PMID 16672461 DOI: 10.1128/AEM.72.5.3228-3235.2006  0.96
2006 Zhou S, Grabar TB, Shanmugam KT, Ingram LO. Betaine tripled the volumetric productivity of D(-)-lactate by Escherichia coli strain SZ132 in mineral salts medium. Biotechnology Letters. 28: 671-6. PMID 16642307 DOI: 10.1007/s10529-006-0033-4  0.96
2006 Zhou S, Shanmugam KT, Yomano LP, Grabar TB, Ingram LO. Fermentation of 12% (w/v) glucose to 1.2 M lactate by Escherichia coli strain SZ194 using mineral salts medium. Biotechnology Letters. 28: 663-70. PMID 16642306 DOI: 10.1007/s10529-006-0032-5  0.96
2006 Shanmugam KT. Lactic acid from biomass Industrial Bioprocessing. 28: 6-7.  0.96
2006 Shanmugam KT. Thermophile makes lactic acid from biomass sugars Industrial Bioprocessing. 28: 6.  0.96
2005 Zhou S, Yomano LP, Shanmugam KT, Ingram LO. Fermentation of 10% (w/v) sugar to D: (-)-lactate by engineered Escherichia coli B. Biotechnology Letters. 27: 1891-6. PMID 16328986 DOI: 10.1007/s10529-005-3899-7  0.96
2005 Patel MA, Ou MS, Ingram LO, Shanmugam KT. Simultaneous saccharification and co-fermentation of crystalline cellulose and sugar cane bagasse hemicellulose hydrolysate to lactate by a thermotolerant acidophilic Bacillus sp. Biotechnology Progress. 21: 1453-60. PMID 16209550 DOI: 10.1021/bp0400339  0.96
2005 Tao H, Hasona A, Do PM, Ingram LO, Shanmugam KT. Global gene expression analysis revealed an unsuspected deo operon under the control of molybdate sensor, ModE protein, in Escherichia coli. Archives of Microbiology. 184: 225-33. PMID 16205910 DOI: 10.1007/s00203-005-0039-7  0.96
2004 Hasona A, Kim Y, Healy FG, Ingram LO, Shanmugam KT. Pyruvate formate lyase and acetate kinase are essential for anaerobic growth of Escherichia coli on xylose Journal of Bacteriology. 186: 7593-7600. PMID 15516572 DOI: 10.1128/JB.186.22.7593-7600.2004  0.96
2004 Patel M, Ou M, Ingram LO, Shanmugam KT. Fermentation of sugar cane bagasse hemicellulose hydrolysate to L(+)-lactic acid by a thermotolerant acidophilic Bacillus sp. Biotechnology Letters. 26: 865-8. PMID 15269531 DOI: 10.1023/B:bile.0000025893.27700.5c  0.96
2004 Shukla VB, Zhou S, Yomano LP, Shanmugam KT, Preston JF, Ingram LO. Production of D(-)-lactate from sucrose and molasses. Biotechnology Letters. 26: 689-93. PMID 15195965 DOI: 10.1023/B:BILE.0000024088.36803.4e  0.96
2004 Underwood SA, Buszko ML, Shanmugam KT, Ingram LO. Lack of protective osmolytes limits final cell density and volumetric productivity of ethanologenic Escherichia coli KO11 during xylose fermentation. Applied and Environmental Microbiology. 70: 2734-40. PMID 15128526 DOI: 10.1128/AEM.70.5.2734-2740.2004  0.96
2004 Causey TB, Shanmugam KT, Yomano LP, Ingram LO. Engineering Escherichia coli for efficient conversion of glucose to pyruvate. Proceedings of the National Academy of Sciences of the United States of America. 101: 2235-40. PMID 14982993 DOI: 10.1073/pnas.0308171100  0.96
2004 Self WT, Hasona A, Shanmugam KT. Expression and regulation of a silent operon, hyf, coding for hydrogenase 4 isoenzyme in Escherichia coli. Journal of Bacteriology. 186: 580-7. PMID 14702328 DOI: 10.1128/JB.186.2.580-587.2004  0.96
2003 Healy FG, Latorre C, Albrecht SL, Reddy PM, Shanmugam KT. Altered kinetic properties of tyrosine-183 to cysteine mutation in glutamine synthetase of anabaena variabilis strain SA1 is responsible for excretion of ammonium ion produced by nitrogenase. Current Microbiology. 46: 423-31. PMID 12732949 DOI: 10.1007/s00284-002-3914-3  0.96
2003 Zhou S, Shanmugam KT, Ingram LO. Functional replacement of the Escherichia coli D-(-)-lactate dehydrogenase gene (ldhA) with the L-(+)-lactate dehydrogenase gene (ldhL) from Pediococcus acidilactici. Applied and Environmental Microbiology. 69: 2237-44. PMID 12676706 DOI: 10.1128/AEM.69.4.2237-2244.2003  0.96
2003 Gonzalez R, Tao H, Purvis JE, York SW, Shanmugam KT, Ingram LO. Gene array-based identification of changes that contribute to ethanol tolerance in ethanologenic Escherichia coli: Comparison of KO11 (parent) to LY01 (resistant mutant) Biotechnology Progress. 19: 612-623. PMID 12675606 DOI: 10.1021/bp025658q  0.96
2003 Causey TB, Zhou S, Shanmugam KT, Ingram LO. Engineering the metabolism of Escherichia coli W3110 for the conversion of sugar to redox-neutral and oxidized products: homoacetate production. Proceedings of the National Academy of Sciences of the United States of America. 100: 825-32. PMID 12556564 DOI: 10.1073/pnas.0337684100  0.96
2003 Zhou S, Causey TB, Hasona A, Shanmugam KT, Ingram LO. Production of optically pure D-lactic acid in mineral salts medium by metabolically engineered Escherichia coli W3110. Applied and Environmental Microbiology. 69: 399-407. PMID 12514021 DOI: 10.1128/AEM.69.1.399-407.2003  0.96
2002 Underwood SA, Zhou S, Causey TB, Yomano LP, Shanmugam KT, Ingram LO. Genetic changes to optimize carbon partitioning between ethanol and biosynthesis in ethanologenic Escherichia coli. Applied and Environmental Microbiology. 68: 6263-72. PMID 12450851 DOI: 10.1128/AEM.68.12.6263-6272.2002  0.96
2002 Hasona A, York SW, Yomano LP, Ingram LO, Shanmugam KT. Decreasing the level of ethyl acetate in ethanolic fermentation broths of Escherichia coli KO11 by expression of Pseudomonas putida estZ esterase. Applied and Environmental Microbiology. 68: 2651-9. PMID 12039716 DOI: 10.1128/AEM.68.6.2651-2659.2002  0.96
2002 Underwood SA, Buszko ML, Shanmugam KT, Ingram LO. Flux through citrate synthase limits the growth of ethanologenic Escherichia coli KO11 during xylose fermentation. Applied and Environmental Microbiology. 68: 1071-81. PMID 11872452 DOI: 10.1128/AEM.68.3.1071-1081.2002  0.96
2002 Gonzalez R, Tao H, Shanmugam KT, York SW, Ingram LO. Global gene expression differences associated with changes in glycolytic flux and growth rate in Escherichia coli during the fermentation of glucose and xylose. Biotechnology Progress. 18: 6-20. PMID 11822894 DOI: 10.1021/bp010121i  0.96
2001 Self WT, Hasona A, Shanmugam KT. N-terminal truncations in the FhlA protein result in formate- and MoeA-independent expression of the hyc (formate hydrogenlyase) operon of Escherichia coli. Microbiology (Reading, England). 147: 3093-104. PMID 11700359 DOI: 10.1099/00221287-147-11-3093  0.96
2001 Self WT, Grunden AM, Hasona A, Shanmugam KT. Molybdate transport. Research in Microbiology. 152: 311-21. PMID 11421278 DOI: 10.1016/S0923-2508(01)01202-5  0.96
2001 Hasona A, Self WT, Shanmugam KT. Transcriptional regulation of the moe (molybdate metabolism) operon of Escherichia coli. Archives of Microbiology. 175: 178-88. PMID 11357510 DOI: 10.1007/s002030100252  0.96
2001 Tao H, Gonzalez R, Martinez A, Rodriguez M, Ingram LO, Preston JF, Shanmugam KT. Engineering a homo-ethanol pathway in Escherichia coli: increased glycolytic flux and levels of expression of glycolytic genes during xylose fermentation. Journal of Bacteriology. 183: 2979-88. PMID 11325924 DOI: 10.1128/JB.183.10.2979-2988.2001  0.96
2000 Self WT, Shanmugam KT. Isolation and characterization of mutated FhlA proteins which activate transcription of the hyc operon (formate hydrogenlyase) of Escherichia coli in the absence of molybdate(1). Fems Microbiology Letters. 184: 47-52. PMID 10689164 DOI: 10.1016/S0378-1097(00)00015-X  0.96
1999 Martinez-Morales F, Borges AC, Martinez A, Shanmugam KT, Ingram LO. Chromosomal integration of heterologous DNA in Escherichia coli with precise removal of markers and replicons used during construction. Journal of Bacteriology. 181: 7143-8. PMID 10559184 DOI: 10.1128/jb.181.22.7143-7148.1999  0.96
1999 Grunden AM, Self WT, Villain M, Blalock JE, Shanmugam KT. An analysis of the binding of repressor protein ModE to modABCD (molybdate transport) operator/promoter DNA of Escherichia coli. The Journal of Biological Chemistry. 274: 24308-15. PMID 10446207 DOI: 10.1074/jbc.274.34.24308  0.96
1999 Self WT, Grunden AM, Hasona A, Shanmugam KT. Transcriptional regulation of molybdoenzyme synthesis in Escherichia coli in response to molybdenum: ModE-molybdate, a repressor of the modABCD (molybdate transport) operon is a secondary transcriptional activator for the hyc and nar operons. Microbiology (Reading, England). 145: 41-55. PMID 10206709 DOI: 10.1099/13500872-145-1-41  0.96
1998 Hasona A, Self WT, Ray RM, Shanmugam KT. Molybdate-dependent transcription of hyc and nar operons of Escherichia coli requires MoeA protein and ModE-molybdate. Fems Microbiology Letters. 169: 111-6. PMID 9851041 DOI: 10.1016/S0378-1097(98)00471-6  0.96
1998 Hasona A, Ray RM, Shanmugam KT. Physiological and genetic analyses leading to identification of a biochemical role for the moeA (molybdate metabolism) gene product in Escherichia coli. Journal of Bacteriology. 180: 1466-72. PMID 9515915  0.96
1998 Kamuru F, Albrecht SL, Allen LH, Shanmugam KT. Dry matter and nitrogen accumulation in rice inoculated with a nitrogenase-derepressed mutant of Anabaena variabilis Agronomy Journal. 90: 529-535.  0.96
1997 Grunden AM, Shanmugam KT. Molybdate transport and regulation in bacteria. Archives of Microbiology. 168: 345-54. PMID 9325422 DOI: 10.1007/s002030050508  0.96
1997 Kamuru F, Albrecht SL, Allen LH, Shanmugam KT. Growth and accumulation of 15N in rice inoculated with the parent and a nitrogenase-derepressed mutant strain of Anabaena variabilis Applied Soil Ecology. 5: 189-195.  0.96
1996 Grunden AM, Ray RM, Rosentel JK, Healy FG, Shanmugam KT. Repression of the Escherichia coli modABCD (molybdate transport) operon by ModE Journal of Bacteriology. 178: 735-744. PMID 8550508  0.96
1996 Reddy PM, Spiller H, Albrecht SL, Shanmugam KT. Photodissimilation of fructose to H2 and CO2 by a dinitrogen-fixing cyanobacterium, Anabaena variabilis Applied and Environmental Microbiology. 62: 1220-1226.  0.96
1995 Rosentel JK, Healy F, Maupin-Furlow JA, Jong Ho Lee, Shanmugam KT. Molybdate and regulation of mod (molybdate transport), fdhF, and hyc (formate hydrogenlyase) operons in Escherichia coli Journal of Bacteriology. 177: 4857-4864. PMID 7665461  0.96
1995 Maupin-Furlow JA, Rosentel JK, Jong Ho Lee, Deppenmeier U, Gunsalus RP, Shanmugam KT. Genetic analysis of the modABCD (molybdate transport) operon of Escherichia coli Journal of Bacteriology. 177: 4851-4856. PMID 7665460  0.96
1995 Healy FG, Ray RM, Aldrich HC, Wilkie AC, Ingram LO, Shanmugam KT. Direct isolation of functional genes encoding cellulases from the microbial consortia in a thermophilic, anaerobic digester maintained on lignocellulose Applied Microbiology and Biotechnology. 43: 667-674. PMID 7546604 DOI: 10.1007/BF00164771  0.96
1994 Menon NK, Chatelus CY, Dervartanian M, Wendt JC, Shanmugam KT, Peck HD, Przybyla AE. Cloning, sequencing, and mutational analysis of the hyb operon encoding Escherichia coli hydrogenase 2 Journal of Bacteriology. 176: 4416-4423. PMID 8021226  0.96
1994 Kamura F, Albrecht SL, Baker JT, Allen LH, Shanmugam KT. Growth responses of paddy rice to an ammonia-excreting mutant cyanobacterium at elevated CO2 concentration Applied Soil Ecology. 1: 199-206. DOI: 10.1016/0929-1393(94)90011-6  0.96
1992 Shanmugam KT, Stewart V, Gunsalus RP, Boxer DH, Cole JA, Chippaux M, DeMoss JA, Giordano G, Lin EC, Rajagopalan KV. Proposed nomenclature for the genes involved in molybdenum metabolism in Escherichia coli and Salmonella typhimurium. Molecular Microbiology. 6: 3452-4. PMID 1484496 DOI: 10.1111/j.1365-2958.1992.tb02215.x  0.96
1991 Ohta K, Beall DS, Mejia JP, Shanmugam KT, Ingram LO. Genetic improvement of Escherichia coli for ethanol production: chromosomal integration of Zymomonas mobilis genes encoding pyruvate decarboxylase and alcohol dehydrogenase II. Applied and Environmental Microbiology. 57: 893-900. PMID 2059047 DOI: 10.1128/aem.57.4.893-900.1991  0.96
1991 Menon NK, Robbins J, Wendt JC, Shanmugam KT, Przybyla AE. Mutational analysis and characterization of the Escherichia coli hya operon, which encodes [NiFe] hydrogenase 1 Journal of Bacteriology. 173: 4851-4861. PMID 1856178  0.96
1991 Ohta K, Beall DS, Mejia JP, Shanmugam KT, Ingram LO. Metabolic engineering of Klebsiella oxytoca M5A1 for ethanol production from xylose and glucose. Applied and Environmental Microbiology. 57: 2810-5. PMID 1746941 DOI: 10.1128/aem.57.10.2810-2815.1991  0.96
1990 Francis K, Patel P, Wendt JC, Shanmugam KT. Purification and characterization of two forms of hydrogenase isoenzyme 1 from Escherichia coli. Journal of Bacteriology. 172: 5750-7. PMID 2211509  0.96
1990 Lee JH, Wendt JC, Shanmugam KT. Identification of a new gene, molR, essential for utilization of molybdate by Escherichia coli. Journal of Bacteriology. 172: 2079-87. PMID 2156810  0.96
1990 Maupin JA, Shanmugam KT. Genetic regulation of formate hydrogenlyase of Escherichia coli: role of the fhlA gene product as a transcriptional activator for a new regulatory gene, fhlB. Journal of Bacteriology. 172: 4798-806. PMID 2118503  0.96
1990 Hendry AT, Bhatnagar RK, Shanmugam KT, Jensen RA. Exploitation of the broad specificity of the membrane-bound isoenzyme of lactate dehydrogenase for direct selection of null mutants in Neisseria gonorrhoeae. Journal of General Microbiology. 136: 45-50. PMID 2112587 DOI: 10.1099/00221287-136-1-45  0.96
1989 Bhatnagar RK, Hendry AT, Shanmugam KT, Jensen RA. The broad-specificity, membrane-bound lactate dehydrogenase of Neisseria gonorrhoeae: ties to aromatic metabolism. Journal of General Microbiology. 135: 353-60. PMID 2515246 DOI: 10.1099/00221287-135-2-353  0.96
1988 Sankar P, Shanmugam KT. Hydrogen metabolism in Escherichia coli: biochemical and genetic evidence for a hydF gene Journal of Bacteriology. 170: 5446-5451. PMID 3056901  0.96
1988 Sankar P, Lee JH, Shanmugam KT. Gene-product relationships of fhlA and fdv genes of Escherichia coli Journal of Bacteriology. 170: 5440-5445. PMID 3056900  0.96
1988 Sankar P, Shanmugam KT. Biochemical and genetic analysis of hydrogen metabolism in Escherichia coli: the hydB gene Journal of Bacteriology. 170: 5433-5439. PMID 2848007  0.96
1987 Spiller H, Shanmugam KT. Physiological conditions for nitrogen fixation in a unicellular marine cyanobacterium, Synechococcus sp. strain SF1. Journal of Bacteriology. 169: 5379-84. PMID 3119563  0.96
1986 Spiller H, Latorre C, Hassan ME, Shanmugam KT. Isolation and characterization of nitrogenase-derepressed mutant strains of cyanobacterium Anabaena variabilis Journal of Bacteriology. 165: 412-419. PMID 2867990  0.96
1986 Latorre C, Lee JH, Spiller H, Shanmugam KT. Ammonium ion-excreting cyanobacterial mutant as a source of nitrogen for growth of rice: A feasibility study Biotechnology Letters. 8: 507-512. DOI: 10.1007/BF01025211  0.96
1985 Sankar P, Lee JH, Shanmugam KT. Cloning of hydrogenase genes and fine structure analysis of an operon essential for H2 metabolism in Escherichia coli Journal of Bacteriology. 162: 353-360. PMID 3884595  0.96
1985 Lee JH, Patel P, Sankar P, Shanmugam KT. Isolation and characterization of mutant strains of Escherichia coli altered in H2 metabolism Journal of Bacteriology. 162: 344-352. PMID 3884594  0.96
1983 Spiller H, Bookjans G, Shanmugam KT. Regulation of hydrogenase activity in vegetative cells of Anabaena variabilis Journal of Bacteriology. 155: 129-137. PMID 6408057  0.96
1983 Klingmüller W, Shanmugam KT, Singh M. Nif-hybrids of enterobacter: Selection for nif gene integration with chlorate Mgg Molecular &Amp; General Genetics. 191: 221-224. PMID 6353161 DOI: 10.1007/BF00334817  0.96
1983 Satoh T, Hom SS, Shanmugam KT. Production of nitrous oxide from nitrite in Klebsiella pneumoniae: mutants altered in nitrogen metabolism. Journal of Bacteriology. 155: 454-8. PMID 6348020  0.96
1981 Rodriguez RL, West RW, Tait RC, Jaynes JM, Shanmugam KT. Isolation and characterization of the hisG and hisD genes of Klebsiella pneumoniae. Gene. 16: 317-20. PMID 7044893 DOI: 10.1016/0378-1119(81)90087-1  0.96
1981 Tait RC, Andersen K, Cangelosi G, Shanmugam KT. Hydrogenase genes Basic Life Sciences. 18: 279-303. PMID 7023460 DOI: 10.1007/978-1-4684-3980-9_17  0.96
1980 Hom SS, Hennecke H, Shanmugam KT. Regulation of nitrogenase biosynthesis in Klebsiella pneumoniae: effect of nitrate. Journal of General Microbiology. 117: 169-79. PMID 6993623 DOI: 10.1099/00221287-117-1-169  0.96
1980 Close TJ, Shanmugam KT. Genetic analysis of a pleiotropic mutant of Klebsiella pneumoniae affected in nitrogen metabolism Journal of General Microbiology. 116: 501-510. PMID 6989957  0.96
1980 Andersen K, Shanmugam KT, Lim ST, Csonka LN, Tait R, Hennecke H, Scott DB, Hom SSM, Haury JF, Valentine A, Valentine RC. Genetic engineering in agriculture with emphasis on nitrogen fixation Trends in Biochemical Sciences. 5: 35-39. DOI: 10.1016/S0968-0004(80)80092-2  0.96
1980 Shanmugam KT, Valentine RC. [5] Nitrogen fixation (nif) mutants of Klebsiella pneumoniae Methods in Enzymology. 69: 47-52. DOI: 10.1016/S0076-6879(80)69007-7  0.96
1979 Mielenz JR, Jackson LE, O'Gara F, Shanmugam KT. Fingerprinting bacterial chromosomal DNA with restriction endonuclease EcoRI: comparison of Rhizobium spp. and identification of mutants Canadian Journal of Microbiology. 25: 803-807. PMID 476554  0.96
1979 Hennecke H, Shanmugam KT. Temperature control of nitrogen fixation in Klebsiella pneumoniae Archives of Microbiology. 123: 259-265. PMID 393199 DOI: 10.1007/BF00406659  0.96
1979 Lim ST, Andersen K, Shanmugam KT. Genetic engineering of symbiotic nitrogen fixation Biochemical Society Symposia. 81-87. PMID 227398  0.96
1979 Lim ST, Shanmugam KT. Regulation of hydrogen utilisation in Rhizobium japonicum by cyclic AMP Bba - General Subjects. 584: 479-492. PMID 222344 DOI: 10.1016/0304-4165(79)90121-1  0.96
1978 Lemke TL, Cramer MB, Shanmugam K. Heterocyclic tricycles as potential CNS agents I: 4-aminoalkylindeno[1,2-c]pyrazoles. Journal of Pharmaceutical Sciences. 67: 1377-81. PMID 702284 DOI: 10.1002/jps.2600671012  0.72
1978 O'Gara F, Shanmugam KT. Mutant strains of clover rhizobium (Rhizobium trifolii) that form nodules on soybean (Glycine max) Proceedings of the National Academy of Sciences of the United States of America. 75: 2343-2347.  0.96
1977 O'Gara F, Shanmugam KT. Regulation of nitrogen fixation in Rhizobium spp. Isolation of mutants of Rhizobium trifulii which induce nitrogenase activity Bba - General Subjects. 500: 277-290. PMID 588592 DOI: 10.1016/0304-4165(77)90020-4  0.96
1977 Andersen K, Shanmugam KT, Valentine RC. Nitrogen fixation (NIF) regulatory mutants of Klebsiella: determination of the energy cost of N2 fixation in vivo Basic Life Sciences. 9: 95-110. PMID 336030  0.96
1977 Andersen K, Shanmugam KT. Energetics of biological nitrogen fixation: determination of the ratio of formation of H2 to NH4+ catalysed by nitrogenase of Klebsiella pneumoniae in vivo Journal of General Microbiology. 103: 107-122. PMID 22579  0.96
1976 Weare NM, Shanmugam KT. Photoproduction of ammonium ion from N2 in Rhodospirillum rubrum Archives of Microbiology. 110: 207-213. PMID 13753 DOI: 10.1007/BF00690229  0.96
1976 O'Gara F, Shanmugam KT. Control of symbiotic nitrogen fixation in Rhizobia regulation of NH4+ assimilation Bba - General Subjects. 451: 342-352. PMID 11819 DOI: 10.1016/0304-4165(76)90129-X  0.96
1976 Shanmugam KT, Morandi C. Amino acids as repressors of nitrogenase biosynthesis in Klebsiella pneumoniae Bba - General Subjects. 437: 322-332. PMID 8101 DOI: 10.1016/0304-4165(76)90002-7  0.96
1976 O'Gara F, Shanmugam KT. Regulation of nitrogen fixation by Rhizobia export of fixed N2 as NH4+ Bba - General Subjects. 437: 313-321. PMID 8100 DOI: 10.1016/0304-4165(76)90001-5  0.96
1975 Shanmugam KT, Valentine RC. Microbial production of ammonium ion from nitrogen Proceedings of the National Academy of Sciences of the United States of America. 72: 136-139. PMID 1090930  0.96
1975 Shanmugam KT, Valentine RC. Molecular biology of nitrogen fixation Science. 187: 919-924. PMID 238283  0.96
1975 Shanmugam KT, Chan I, Morandi C. Regulation of nitrogen fixation. Nitrogenase-derepressed mutants of Klebsiella pneumoniae Bba - Bioenergetics. 408: 101-111. PMID 59 DOI: 10.1016/0005-2728(75)90002-X  0.96
1974 Streicher SL, Shanmugam KT, Ausubel F, Morandi C, Goldberg RB. Regulation of nitrogen fixation in Klebsiella pneumoniae: evidence for a role of glutamine synthetase as a regulator of nitrogenase synthesis Journal of Bacteriology. 120: 815-821. PMID 4156359  0.96
1974 Shanmugam KT, Loo AS, Valentine RC. Deletion mutants of nitrogen fixation in Klebsiella pneumoniae: Mapping of a cluster of nif genes essential for nitrogenase activity Bba - General Subjects. 338: 545-553. DOI: 10.1016/0304-4165(74)90317-1  0.96
1972 Buchanan BB, Schürmann P, Shanmugam KT. Role of the reductive carboxylic acid cycle in a photosynthetic bacterium lacking ribulose 1,5-diphosphate carboxylase Bba - Bioenergetics. 283: 136-145. PMID 4643350 DOI: 10.1016/0005-2728(72)90105-3  0.96
1972 Shanmugam KT, Arnon DI. Effect of ferredoxin on bacterial photophosphorylation. Biochimica Et Biophysica Acta. 256: 487-97. PMID 4622736 DOI: 10.1016/0005-2728(72)90077-1  0.96
1972 Shanmugam KT, Buchanan BB, Arnon DI. Ferredoxins in light- and dark-grown photosynthetic cells with special reference to Rhodospirillum rubrum. Biochimica Et Biophysica Acta. 256: 477-86. PMID 4401426 DOI: 10.1016/0005-2728(72)90076-X  0.96
1969 Shanmugam KT, Berger LR. Mechanism of catalase induction in Rhodopseudomonas spheroides: the effects of acridine, acriflavin, and diphenylamine. Archiv FüR Mikrobiologie. 69: 206-15. PMID 5385700 DOI: 10.1007/BF00408973  0.96
1969 Shanmugam KT, Berger LR. Mechanism of catalase induction in Rhodopseudomonas spheroides: role of porphyrin excretion. Archiv FüR Mikrobiologie. 69: 197-205. PMID 5385699 DOI: 10.1007/BF00408972  0.96
Show low-probability matches.