| Year |
Citation |
Score |
| 2024 |
Harada R, Hirakawa Y, Yabuki A, Kim E, Yazaki E, Kamikawa R, Nakano K, Eliáš M, Inagaki Y. Encyclopaedia of family A DNA polymerases localized in organelles: Evolutionary contribution of bacteria including the proto-mitochondrion. Molecular Biology and Evolution. PMID 38271287 DOI: 10.1093/molbev/msae014 |
0.338 |
|
| 2023 |
Gyaltshen Y, Rozenberg A, Paasch A, Burns JA, Warring S, Larson R, Maurer-Alcalá XX, Dacks J, Narechania A, Kim E. Long-read-based genome assembly reveals numerous endogenous viral elements in the green algal bacterivore Cymbomonas tetramitiformis. Genome Biology and Evolution. PMID 37883709 DOI: 10.1093/gbe/evad194 |
0.331 |
|
| 2023 |
Blaz J, Galindo LJ, Heiss AA, Kaur H, Torruella G, Yang A, Alexa Thompson L, Filbert A, Warring S, Narechania A, Shiratori T, Ishida KI, Dacks JB, López-García P, Moreira D, ... Kim E, et al. One high quality genome and two transcriptome datasets for new species of Mantamonas, a deep-branching eukaryote clade. Scientific Data. 10: 603. PMID 37689692 DOI: 10.1038/s41597-023-02488-2 |
0.798 |
|
| 2023 |
Yubuki N, Torruella G, Galindo LJ, Heiss AA, Ciobanu MC, Shiratori T, Ishida KI, Blaz J, Kim E, Moreira D, López-García P, Eme L. Molecular and morphological characterization of four new ancyromonad genera and proposal for an updated taxonomy of the Ancyromonadida. The Journal of Eukaryotic Microbiology. e12997. PMID 37606230 DOI: 10.1111/jeu.12997 |
0.782 |
|
| 2022 |
Torruella G, Galindo LJ, Moreira D, Ciobanu M, Heiss AA, Yubuki N, Kim E, López-García P. Expanding the molecular and morphological diversity of Apusomonadida, a deep-branching group of gliding bacterivorous protists. The Journal of Eukaryotic Microbiology. e12956. PMID 36453005 DOI: 10.1111/jeu.12956 |
0.715 |
|
| 2020 |
Heiss AA, Warring SD, Lukacs K, Favate J, Yang A, Gyaltshen Y, Filardi C, Simpson AGB, Kim E. Description of Imasa heleensis, gen. nov., sp. nov. (Imasidae, fam. nov.), a Deep-Branching Marine Malawimonad and Possible Key Taxon in Understanding Early Eukaryotic Evolution. The Journal of Eukaryotic Microbiology. PMID 33274482 DOI: 10.1111/jeu.12837 |
0.773 |
|
| 2020 |
Maruyama S, Kim E. Evolution of Photosynthetic Eukaryotes; Current Opinion, Perplexity, and a New Perspective. Results and Problems in Cell Differentiation. 69: 337-351. PMID 33263878 DOI: 10.1007/978-3-030-51849-3_12 |
0.372 |
|
| 2019 |
Kerney R, Leavitt J, Hill E, Zhang H, Kim E, Burns J. Co-cultures of Oophila amblystomatis between Ambystoma maculatum and Ambystoma gracile hosts show host-symbiont fidelity Symbiosis. 78: 73-85. DOI: 10.1007/S13199-018-00591-2 |
0.324 |
|
| 2018 |
Cenci U, Sibbald SJ, Curtis BA, Kamikawa R, Eme L, Moog D, Henrissat B, Maréchal E, Chabi M, Djemiel C, Roger AJ, Kim E, Archibald JM. Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids. Bmc Biology. 16: 137. PMID 30482201 DOI: 10.1186/S12915-018-0593-5 |
0.732 |
|
| 2018 |
Yabuki A, Gyaltshen Y, Heiss AA, Fujikura K, Kim E. Ophirina amphinema n. gen., n. sp., a New Deeply Branching Discobid with Phylogenetic Affinity to Jakobids. Scientific Reports. 8: 16219. PMID 30385814 DOI: 10.1038/S41598-018-34504-6 |
0.727 |
|
| 2018 |
Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, Agatha S, Berney C, Brown MW, Burki F, Cárdenas P, Čepička I, Chistyakova L, Del Campo J, Dunthorn M, ... ... Kim E, et al. Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes. The Journal of Eukaryotic Microbiology. PMID 30257078 DOI: 10.1111/Jeu.12691 |
0.737 |
|
| 2018 |
Yurchenko T, Ševčíková T, Přibyl P, El Karkouri K, Klimeš V, Amaral R, Zbránková V, Kim E, Raoult D, Santos LMA, Eliáš M. A gene transfer event suggests a long-term partnership between eustigmatophyte algae and a novel lineage of endosymbiotic bacteria. The Isme Journal. PMID 29880910 DOI: 10.1038/S41396-018-0177-Y |
0.45 |
|
| 2018 |
Burns JA, Pittis AA, Kim E. Gene-based predictive models of trophic modes suggest Asgard archaea are not phagocytotic. Nature Ecology & Evolution. PMID 29459706 DOI: 10.1038/S41559-018-0477-7 |
0.413 |
|
| 2018 |
Arroyo AS, López-Escardó D, Kim E, Ruiz-Trillo I, Najle SR. Novel Diversity of Deeply Branching Holomycota and Unicellular Holozoans Revealed by Metabarcoding in Middle Paraná River, Argentina Frontiers in Ecology and Evolution. 6. DOI: 10.3389/Fevo.2018.00099 |
0.438 |
|
| 2017 |
Heiss AA, Heiss AW, Lukacs K, Kim E. The Flagellar Apparatus of the Glaucophyte Cyanophora cuspidata. Journal of Phycology. PMID 28741699 DOI: 10.1111/Jpy.12569 |
0.724 |
|
| 2017 |
Burns JA, Zhang H, Hill E, Kim E, Kerney R. Transcriptome analysis illuminates the nature of the intracellular interaction in a vertebrate-algal symbiosis. Elife. 6. PMID 28462779 DOI: 10.7554/Elife.22054 |
0.302 |
|
| 2017 |
Berney C, Ciuprina A, Bender S, Brodie J, Edgcomb V, Kim E, Rajan J, Parfrey LW, Adl S, Audic S, Bass D, Caron DA, Cochrane G, Czech L, Dunthorn M, et al. UniEuk: Time to Speak a Common Language in Protistology! The Journal of Eukaryotic Microbiology. PMID 28337822 DOI: 10.1111/Jeu.12414 |
0.566 |
|
| 2017 |
Satjarak A, Burns JA, Kim E, Graham LE. Complete mitochondrial genomes of prasinophyte algae Pyramimonas parkeae and Cymbomonas tetramitiformis. Journal of Phycology. PMID 28191642 DOI: 10.1111/Jpy.12521 |
0.796 |
|
| 2016 |
Kim E, Sprung B, Duhamel S, Filardi C, Shin MK. Oligotrophic Lagoons of the South Pacific Ocean Are Home to a Surprising Number of Novel Eukaryotic Microorganisms. Environmental Microbiology. PMID 27581800 DOI: 10.1111/1462-2920.13523 |
0.357 |
|
| 2016 |
Satjarak A, Paasch AE, Graham LE, Kim E. Complete Chloroplast Genome Sequence of Phagomixotrophic Green Alga Cymbomonas tetramitiformis. Genome Announcements. 4. PMID 27313295 DOI: 10.1128/Genomea.00551-16 |
0.785 |
|
| 2016 |
Yang A, Narechania A, Kim E. Rickettsial endosymbiont in the "early-diverging" streptophyte green alga Mesostigma viride. Journal of Phycology. 52: 219-29. PMID 27037587 DOI: 10.1111/Jpy.12385 |
0.419 |
|
| 2015 |
Burns JA, Paasch A, Narechania A, Kim E. Comparative genomics of a bacterivorous green alga reveals evolutionary causalities and consequences of phago-mixotrophic mode of nutrition. Genome Biology and Evolution. PMID 26224703 DOI: 10.1093/Gbe/Evv144 |
0.43 |
|
| 2015 |
Derelle R, Torruella G, Klimeš V, Brinkmann H, Kim E, Vl?ek ?, Lang BF, Eliáš M. Bacterial proteins pinpoint a single eukaryotic root. Proceedings of the National Academy of Sciences of the United States of America. 112: E693-9. PMID 25646484 DOI: 10.1073/Pnas.1420657112 |
0.475 |
|
| 2014 |
Kim E, Lin Y, Kerney R, Blumenberg L, Bishop C. Phylogenetic analysis of algal symbionts associated with four North American amphibian egg masses. Plos One. 9: e108915. PMID 25393119 DOI: 10.1371/Journal.Pone.0108915 |
0.351 |
|
| 2014 |
Yabuki A, Kamikawa R, Ishikawa SA, Kolisko M, Kim E, Tanabe AS, Kume K, Ishida K, Inagki Y. Palpitomonas bilix represents a basal cryptist lineage: insight into the character evolution in Cryptista. Scientific Reports. 4: 4641. PMID 24717814 DOI: 10.1038/Srep04641 |
0.587 |
|
| 2014 |
Heger TJ, Edgcomb VP, Kim E, Lukeš J, Leander BS, Yubuki N. A resurgence in field research is essential to better understand the diversity, ecology, and evolution of microbial eukaryotes. The Journal of Eukaryotic Microbiology. 61: 214-23. PMID 24325268 DOI: 10.1111/Jeu.12095 |
0.366 |
|
| 2014 |
Kim E, Maruyama S. A contemplation on the secondary origin of green algal and plant plastids Acta Societatis Botanicorum Poloniae. 83: 331-336. DOI: 10.5586/Asbp.2014.040 |
0.366 |
|
| 2013 |
Maruyama S, Kim E. A modern descendant of early green algal phagotrophs. Current Biology : Cb. 23: 1081-4. PMID 23707430 DOI: 10.1016/J.Cub.2013.04.063 |
0.418 |
|
| 2013 |
Fulnecková J, SevcÃková T, Fajkus J, Lukesová A, Lukes M, Vlcek C, Lang BF, Kim E, Eliás M, Sykorová E. A broad phylogenetic survey unveils the diversity and evolution of telomeres in eukaryotes. Genome Biology and Evolution. 5: 468-83. PMID 23395982 DOI: 10.1093/Gbe/Evt019 |
0.445 |
|
| 2013 |
Kim E, Archibald JM. Ultrastructure and molecular phylogeny of the cryptomonad Goniomonas avonlea sp. nov. Protist. 164: 160-82. PMID 23127606 DOI: 10.1016/J.Protis.2012.10.002 |
0.632 |
|
| 2012 |
Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, ... ... Kim E, et al. Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature. 492: 59-65. PMID 23201678 DOI: 10.1038/Nature11681 |
0.759 |
|
| 2012 |
Takishita K, Chikaraishi Y, Leger MM, Kim E, Yabuki A, Ohkouchi N, Roger AJ. Lateral transfer of tetrahymanol-synthesizing genes has allowed multiple diverse eukaryote lineages to independently adapt to environments without oxygen. Biology Direct. 7: 5. PMID 22296756 DOI: 10.1186/1745-6150-7-5 |
0.31 |
|
| 2011 |
Tanifuji G, Kim E, Onodera NT, Gibeault R, Dlutek M, Cawthorn RJ, Fiala I, Lukes J, Greenwood SJ, Archibald JM. Genomic characterization of Neoparamoeba pemaquidensis (Amoebozoa) and its kinetoplastid endosymbiont. Eukaryotic Cell. 10: 1143-6. PMID 21666073 DOI: 10.1128/Ec.05027-11 |
0.62 |
|
| 2011 |
Kerney R, Kim E, Hangarter RP, Heiss AA, Bishop CD, Hall BK. Intracellular invasion of green algae in a salamander host. Proceedings of the National Academy of Sciences of the United States of America. 108: 6497-502. PMID 21464324 DOI: 10.1073/Pnas.1018259108 |
0.712 |
|
| 2011 |
Kim E, Harrison JW, Sudek S, Jones MD, Wilcox HM, Richards TA, Worden AZ, Archibald JM. Newly identified and diverse plastid-bearing branch on the eukaryotic tree of life. Proceedings of the National Academy of Sciences of the United States of America. 108: 1496-500. PMID 21205890 DOI: 10.1073/Pnas.1013337108 |
0.64 |
|
| 2010 |
Graham LE, Kim E, Arancibia-Avila P, Graham JM, Wilcox LW. Evolutionary and ecophysiological significance of sugar utilization by the peat moss Sphagnum compactum (Sphagnaceae) and the common charophycean associates Cylindrocystis brebissonii and Mougeotia sp. (Zygnemataceae). American Journal of Botany. 97: 1485-91. PMID 21616902 DOI: 10.3732/Ajb.0900341 |
0.751 |
|
| 2010 |
Kim E, Archibald JM. Plastid evolution: gene transfer and the maintenance of 'stolen' organelles. Bmc Biology. 8: 73. PMID 20594287 DOI: 10.1186/1741-7007-8-73 |
0.613 |
|
| 2010 |
Kim E, Park JS, Simpson AG, Matsunaga S, Watanabe M, Murakami A, Sommerfeld K, Onodera NT, Archibald JM. Complex array of endobionts in Petalomonas sphagnophila, a large heterotrophic euglenid protist from Sphagnum-dominated peatlands. The Isme Journal. 4: 1108-20. PMID 20376101 DOI: 10.1038/Ismej.2010.40 |
0.73 |
|
| 2008 |
Kim E, Lane CE, Curtis BA, Kozera C, Bowman S, Archibald JM. Complete sequence and analysis of the mitochondrial genome of Hemiselmis andersenii CCMP644 (Cryptophyceae). Bmc Genomics. 9: 215. PMID 18474103 DOI: 10.1186/1471-2164-9-215 |
0.644 |
|
| 2008 |
Cuvelier ML, Ortiz A, Kim E, Moehlig H, Richardson DE, Heidelberg JF, Archibald JM, Worden AZ. Widespread distribution of a unique marine protistan lineage. Environmental Microbiology. 10: 1621-34. PMID 18341584 DOI: 10.1111/J.1462-2920.2008.01580.X |
0.615 |
|
| 2006 |
Kim E, Simpson AG, Graham LE. Evolutionary relationships of apusomonads inferred from taxon-rich analyses of 6 nuclear encoded genes. Molecular Biology and Evolution. 23: 2455-66. PMID 16982820 DOI: 10.1093/Molbev/Msl120 |
0.632 |
|
| 2006 |
Kim E, Wilcox LW, Fawley MW, Graham LE. Phylogenetic position of the green flagellate Mesostigma viride based on α-tubulin and β-tubulin gene sequences International Journal of Plant Sciences. 167: 873-883. DOI: 10.1086/504391 |
0.699 |
|
| 2003 |
Kim E, Graham J, Graham L. 77 Cryptic speciation of Peridinium Limbatum Journal of Phycology. 39: 27-27. DOI: 10.1111/J.0022-3646.2003.03906001_77.X |
0.742 |
|
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