David A. Relman - Publications

Stanford University, Palo Alto, CA 
Microbiology Biology, Molecular Biology, Immunology

219 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Sprockett DD, Martin M, Costello EK, Burns AR, Holmes SP, Gurven MD, Relman DA. Microbiota assembly, structure, and dynamics among Tsimane horticulturalists of the Bolivian Amazon. Nature Communications. 11: 3772. PMID 32728114 DOI: 10.1038/S41467-020-17541-6  0.44
2020 Proctor DM, Shelef KM, Gonzalez A, Davis CL, Dethlefsen L, Burns AR, Loomer PM, Armitage GC, Ryder MI, Millman ME, Knight R, Holmes SP, Relman DA. Microbial biogeography and ecology of the mouth and implications for periodontal diseases. Periodontology 2000. 82: 26-41. PMID 31850642 DOI: 10.1111/Prd.12268  0.52
2019 Roth TL, Switzer A, Watanabe-Chailland M, Bik EM, Relman DA, Romick-Rosendale LE, Ollberding NJ. Reduced Gut Microbiome Diversity and Metabolome Differences in Rhinoceros Species at Risk for Iron Overload Disorder. Frontiers in Microbiology. 10: 2291. PMID 31649637 DOI: 10.3389/Fmicb.2019.02291  0.44
2018 Davis NM, Proctor DM, Holmes SP, Relman DA, Callahan BJ. Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data. Microbiome. 6: 226. PMID 30558668 DOI: 10.1186/S40168-018-0605-2  0.44
2018 Goltsman DSA, Sun CL, Proctor DM, DiGiulio DB, Robaczewska A, Thomas BC, Shaw GM, Stevenson DK, Holmes SP, Banfield JF, Relman DA. Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome. Genome Research. PMID 30232199 DOI: 10.1101/Gr.236000.118  0.44
2018 Proctor DM, Fukuyama JA, Loomer PM, Armitage GC, Lee SA, Davis NM, Ryder MI, Holmes SP, Relman DA. A spatial gradient of bacterial diversity in the human oral cavity shaped by salivary flow. Nature Communications. 9: 681. PMID 29445174 DOI: 10.1038/S41467-018-02900-1  0.52
2017 Dudek NK, Sun CL, Burstein D, Kantor RS, Aliaga Goltsman DS, Bik EM, Thomas BC, Banfield JF, Relman DA. Novel Microbial Diversity and Functional Potential in the Marine Mammal Oral Microbiome. Current Biology : Cb. PMID 29153320 DOI: 10.1016/J.Cub.2017.10.040  0.44
2017 Callahan BJ, DiGiulio DB, Goltsman DSA, Sun CL, Costello EK, Jeganathan P, Biggio JR, Wong RJ, Druzin ML, Shaw GM, Stevenson DK, Holmes SP, Relman DA. Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women. Proceedings of the National Academy of Sciences of the United States of America. PMID 28847941 DOI: 10.1073/Pnas.1705899114  0.44
2017 Fukuyama J, Rumker L, Sankaran K, Jeganathan P, Dethlefsen L, Relman DA, Holmes SP. Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment. Plos Computational Biology. 13: e1005706. PMID 28821012 DOI: 10.1371/Journal.Pcbi.1005706  0.44
2016 Charbonneau MR, Blanton LV, DiGiulio DB, Relman DA, Lebrilla CB, Mills DA, Gordon JI. A microbial perspective of human developmental biology. Nature. 535: 48-55. PMID 27383979 DOI: 10.1038/Nature18845  1
2016 Strouts FR, Popper SJ, Partidos CD, Stinchcomb DT, Osorio JE, Relman DA. Early Transcriptional Signatures of the Immune Response to a Live Attenuated Tetravalent Dengue Vaccine Candidate in Non-human Primates. Plos Neglected Tropical Diseases. 10: e0004731. PMID 27214236 DOI: 10.1371/Journal.Pntd.0004731  1
2016 Relman DA. Gut microbiota: How to build healthy growth-promoting gut communities. Nature Reviews. Gastroenterology & Hepatology. PMID 27188819 DOI: 10.1038/Nrgastro.2016.74  1
2016 Bik EM, Costello EK, Switzer AD, Callahan BJ, Holmes SP, Wells RS, Carlin KP, Jensen ED, Venn-Watson S, Relman DA. Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea. Nature Communications. 7: 10516. PMID 26839246 DOI: 10.1038/Ncomms10516  1
2015 Palmer MJ, Fukuyama F, Relman DA. A more systematic approach to biological risk:Management of emerging risks in life science and technology requires new leadership and a sober assessment of the legacy of Asilomar Science. 350: 1471-1473. PMID 26680180 DOI: 10.1126/Science.Aad8849  1
2015 Hoy YE, Bik EM, Lawley TD, Holmes SP, Monack DM, Theriot JA, Relman DA. Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time. Plos One. 10: e0142825. PMID 26565698 DOI: 10.1371/Journal.Pone.0142825  1
2015 DiGiulio DB, Stevenson DK, Shaw G, Lyell DJ, Relman DA. Reply to Keelan and Payne: Microbiota-related pathways for preterm birth. Proceedings of the National Academy of Sciences of the United States of America. PMID 26515091 DOI: 10.1073/Pnas.1517939112  1
2015 Frank GM, Adalja A, Barbour A, Casadevall A, Dormitzer PR, Duchin J, Hayden FG, Hirsch MS, Hynes NA, Lipsitch M, Pavia AT, Relman DA. IDSA and Gain-of-Function Experiments with Pathogens having Pandemic Potential1. The Journal of Infectious Diseases. PMID 26416656 DOI: 10.1093/Infdis/Jiv474  1
2015 Relman DA. The Human Microbiome and the Future Practice of Medicine. Jama. 314: 1127-8. PMID 26372576 DOI: 10.1001/Jama.2015.10700  1
2015 DiGiulio DB, Callahan BJ, McMurdie PJ, Costello EK, Lyell DJ, Robaczewska A, Sun CL, Goltsman DS, Wong RJ, Shaw G, Stevenson DK, Holmes SP, Relman DA. Temporal and spatial variation of the human microbiota during pregnancy. Proceedings of the National Academy of Sciences of the United States of America. 112: 11060-5. PMID 26283357 DOI: 10.1073/Pnas.1502875112  1
2015 Duprex WP, Fouchier RA, Imperiale MJ, Lipsitch M, Relman DA. Gain-of-function experiments: time for a real debate. Nature Reviews. Microbiology. 13: 58-64. PMID 25482289 DOI: 10.1038/Nrmicro3405  1
2015 Relman DA. Actionable sequence data on infectious diseases in the clinical workplace. Clinical Chemistry. 61: 38-40. PMID 25398849 DOI: 10.1373/Clinchem.2014.229211  1
2014 Modi SR, Collins JJ, Relman DA. Antibiotics and the gut microbiota. The Journal of Clinical Investigation. 124: 4212-8. PMID 25271726 DOI: 10.1172/Jci72333  1
2014 Martens EC, Sonnenburg JL, Relman DA. Editorial overview: insights into molecular mechanisms of microbiota. Journal of Molecular Biology. 426: 3827-9. PMID 25218944 DOI: 10.1016/J.Jmb.2014.08.021  1
2014 Bik EM, Relman DA. Unrest at home: diarrheal disease and microbiota disturbance. Genome Biology. 15: 120. PMID 25002208 DOI: 10.1186/Gb4182  1
2014 Costello EK, Relman DA. Population health: immaturity in the gut microbial community. Nature. 510: 344-5. PMID 24896185 DOI: 10.1038/Nature13347  1
2014 Doshi P. The importance of influenza vaccination-reply. Jama Internal Medicine. 174: 645-6. PMID 24711195 DOI: 10.1001/jamainternmed.2013.11170  1
2014 Casadevall A, Enquist L, Imperiale MJ, Keim P, Osterholm MT, Relman DA. Redaction of sensitive data in the publication of dual use research of concern. Mbio. 5: e00991-13. PMID 24381302 DOI: 10.1128/Mbio.00991-13  1
2014 Relman DA. "Inconvenient truths" in the pursuit of scientific knowledge and public health. The Journal of Infectious Diseases. 209: 170-2. PMID 24106297 DOI: 10.1093/Infdis/Jit529  1
2014 Ravel J, Blaser MJ, Braun J, Brown E, Bushman FD, Chang EB, Davies J, Dewey KG, Dinan T, Dominguez-Bello M, Erdman SE, Finlay BB, Garrett WS, Huffnagle GB, Huttenhower C, ... ... Relman DA, et al. Human microbiome science: Vision for the future, Bethesda, MD, July 24 to 26, 2013 Microbiome. 2. DOI: 10.1186/2049-2618-2-16  1
2014 Relman DA, Falkow S. A Molecular Perspective of Microbial Pathogenicity Mandell, Douglas, and Bennett's Principles and Practice of Infectious Diseases. 1: 1-10. DOI: 10.1016/B978-1-4557-4801-3.00001-1  1
2014 Maiwald M, Relman DA. Whipple's disease Infections of the Central Nervous System: Fourth Edition. DOI: 10.1016/0753-3322(93)90307-7  1
2013 Yan M, Pamp SJ, Fukuyama J, Hwang PH, Cho DY, Holmes S, Relman DA. Nasal microenvironments and interspecific interactions influence nasal microbiota complexity and S. aureus carriage. Cell Host & Microbe. 14: 631-40. PMID 24331461 DOI: 10.1016/J.Chom.2013.11.005  1
2013 Petschow B, Doré J, Hibberd P, Dinan T, Reid G, Blaser M, Cani PD, Degnan FH, Foster J, Gibson G, Hutton J, Klaenhammer TR, Ley R, Nieuwdorp M, Pot B, ... Relman D, et al. Probiotics, prebiotics, and the host microbiome: the science of translation. Annals of the New York Academy of Sciences. 1306: 1-17. PMID 24266656 DOI: 10.1111/Nyas.12303  1
2013 Costello EK, Carlisle EM, Bik EM, Morowitz MJ, Relman DA. Microbiome assembly across multiple body sites in low-birthweight infants. Mbio. 4: e00782-13. PMID 24169577 DOI: 10.1128/Mbio.00782-13  1
2013 Kashyap PC, Marcobal A, Ursell LK, Smits SA, Sonnenburg ED, Costello EK, Higginbottom SK, Domino SE, Holmes SP, Relman DA, Knight R, Gordon JI, Sonnenburg JL. Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. Proceedings of the National Academy of Sciences of the United States of America. 110: 17059-64. PMID 24062455 DOI: 10.1073/Pnas.1306070110  1
2013 Sun CL, Relman DA. Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome. Genome Biology. 14: 127. PMID 23906048 DOI: 10.1186/Gb-2013-14-7-127  1
2013 Diaz MA, Bik EM, Carlin KP, Venn-Watson SK, Jensen ED, Jones SE, Gaston EP, Relman DA, Versalovic J. Identification of Lactobacillus strains with probiotic features from the bottlenose dolphin (Tursiops truncatus). Journal of Applied Microbiology. 115: 1037-51. PMID 23855505 DOI: 10.1111/Jam.12305  1
2013 Relman DA. Metagenomics, infectious disease diagnostics, and outbreak investigations: sequence first, ask questions later? Jama. 309: 1531-2. PMID 23571595 DOI: 10.1001/Jama.2013.3678  1
2013 Relman DA. The increasingly compelling moral responsibilities of life scientists. The Hastings Center Report. 43: 34-5. PMID 23494700 DOI: 10.1002/Hast.156  1
2013 Teles RM, Graeber TG, Krutzik SR, Montoya D, Schenk M, Lee DJ, Komisopoulou E, Kelly-Scumpia K, Chun R, Iyer SS, Sarno EN, Rea TH, Hewison M, Adams JS, Popper SJ, ... Relman DA, et al. Type I interferon suppresses type II interferon-triggered human anti-mycobacterial responses. Science (New York, N.Y.). 339: 1448-53. PMID 23449998 DOI: 10.1126/Science.1233665  1
2013 Relman DA. Microbiology. Undernutrition--looking within for answers. Science (New York, N.Y.). 339: 530-2. PMID 23363770 DOI: 10.1126/Science.1234723  1
2013 Lin A, Bik EM, Costello EK, Dethlefsen L, Haque R, Relman DA, Singh U. Distinct distal gut microbiome diversity and composition in healthy children from Bangladesh and the United States. Plos One. 8: e53838. PMID 23349750 DOI: 10.1371/Journal.Pone.0053838  1
2013 Relman DA. Restoration of the gut microbial habitat as a disease therapy. Nature Biotechnology. 31: 35-7. PMID 23302933 DOI: 10.1038/Nbt.2475  1
2013 Sharon I, Morowitz MJ, Thomas BC, Costello EK, Relman DA, Banfield JF. Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization. Genome Research. 23: 111-20. PMID 22936250 DOI: 10.1101/Gr.142315.112  1
2013 Gordon J, Knowlton N, Relman DA, Rohwer F, Youle M. Superorganisms and holobionts Microbe. 8: 152-153. DOI: 10.1128/Microbe.8.152.1  1
2012 Popper SJ, Gordon A, Liu M, Balmaseda A, Harris E, Relman DA. Temporal dynamics of the transcriptional response to dengue virus infection in Nicaraguan children. Plos Neglected Tropical Diseases. 6: e1966. PMID 23285306 DOI: 10.1371/Journal.Pntd.0001966  1
2012 Relman DA. The human microbiome: ecosystem resilience and health. Nutrition Reviews. 70: S2-9. PMID 22861804 DOI: 10.1111/J.1753-4887.2012.00489.X  1
2012 Chung H, Pamp SJ, Hill JA, Surana NK, Edelman SM, Troy EB, Reading NC, Villablanca EJ, Wang S, Mora JR, Umesaki Y, Mathis D, Benoist C, Relman DA, Kasper DL. Gut immune maturation depends on colonization with a host-specific microbiota. Cell. 149: 1578-93. PMID 22726443 DOI: 10.1016/J.Cell.2012.04.037  1
2012 Relman DA. Microbiology: Learning about who we are. Nature. 486: 194-5. PMID 22699602 DOI: 10.1038/486194A  1
2012 Lemon KP, Armitage GC, Relman DA, Fischbach MA. Microbiota-targeted therapies: an ecological perspective. Science Translational Medicine. 4: 137rv5. PMID 22674555 DOI: 10.1126/Scitranslmed.3004183  1
2012 Costello EK, Stagaman K, Dethlefsen L, Bohannan BJ, Relman DA. The application of ecological theory toward an understanding of the human microbiome. Science (New York, N.Y.). 336: 1255-62. PMID 22674335 DOI: 10.1126/Science.1224203  1
2012 Pride DT, Salzman J, Relman DA. Comparisons of clustered regularly interspaced short palindromic repeats and viromes in human saliva reveal bacterial adaptations to salivary viruses. Environmental Microbiology. 14: 2564-76. PMID 22583485 DOI: 10.1111/J.1462-2920.2012.02775.X  1
2012 Osterholm MT, Relman DA. Creating a mammalian-transmissible A/H5N1 influenza virus: social contracts, prudence, and alternative perspectives. The Journal of Infectious Diseases. 205: 1636-8. PMID 22454472 DOI: 10.1093/Infdis/Jis259  1
2012 Pamp SJ, Harrington ED, Quake SR, Relman DA, Blainey PC. Single-cell sequencing provides clues about the host interactions of segmented filamentous bacteria (SFB). Genome Research. 22: 1107-19. PMID 22434425 DOI: 10.1101/Gr.131482.111  1
2012 Berns KI, Casadevall A, Cohen ML, Ehrlich SA, Enquist LW, Fitch JP, Franz DR, Fraser-Liggett CM, Grant CM, Imperiale MJ, Kanabrocki J, Keim PS, Lemon SM, Levy SB, Lumpkin JR, ... ... Relman DA, et al. Public health and biosecurity. Adaptations of avian flu virus are a cause for concern. Science (New York, N.Y.). 335: 660-1. PMID 22294736 DOI: 10.1126/Science.1217994  1
2012 Berns KI, Casadevall A, Cohen ML, Ehrlich SA, Enquist LW, Fitch JP, Franz DR, Fraser-Liggett CM, Grant CM, Imperiale MJ, Kanabrocki J, Keim PS, Lemon SM, Levy SB, Lumpkin JR, ... ... Relman DA, et al. Policy: Adaptations of avian flu virus are a cause for concern. Nature. 482: 153-4. PMID 22294204 DOI: 10.1038/482153A  1
2012 Fukuyama J, McMurdie PJ, Dethlefsen L, Relman DA, Holmes S. Comparisons of distance methods for combining covariates and abundances in microbiome studies. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 213-24. PMID 22174277  1
2012 Pride DT, Salzman J, Haynes M, Rohwer F, Davis-Long C, White RA, Loomer P, Armitage GC, Relman DA. Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome. The Isme Journal. 6: 915-26. PMID 22158393 DOI: 10.1038/Ismej.2011.169  1
2012 Fukuyama J, McMurdie P, Dethlefsen L, Relman D, Holmes SP. UniFrac and double principal coordinates analysis F1000research. 3. DOI: 10.7490/F1000Research.1089813.1  0.44
2012 Relman DA. Presumed guilt in the anthrax case - Response Science. 336: 669-670. DOI: 10.1126/Science.336.6082.669-B  1
2011 Dieterich C, Relman DA. Modulation of the host interferon response and ISGylation pathway by B. pertussis filamentous hemagglutinin. Plos One. 6: e27535. PMID 22140447 DOI: 10.1371/Journal.Pone.0027535  1
2011 Relman DA. Microbial genomics and infectious diseases. The New England Journal of Medicine. 365: 347-57. PMID 21793746 DOI: 10.1056/Nejmra1003071  1
2011 Brickman TJ, Cummings CA, Liew SY, Relman DA, Armstrong SK. Transcriptional profiling of the iron starvation response in Bordetella pertussis provides new insights into siderophore utilization and virulence gene expression. Journal of Bacteriology. 193: 4798-812. PMID 21742863 DOI: 10.1128/Jb.05136-11  1
2011 Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, ... ... Relman DA, et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nature Biotechnology. 29: 415-20. PMID 21552244 DOI: 10.1038/Nbt.1823  1
2011 Pathan N, Franklin JL, Eleftherohorinou H, Wright VJ, Hemingway CA, Waddell SJ, Griffiths M, Dennis JL, Relman DA, Harding SE, Levin M. Myocardial depressant effects of interleukin 6 in meningococcal sepsis are regulated by p38 mitogen-activated protein kinase. Critical Care Medicine. 39: 1692-711. PMID 21494108 DOI: 10.1097/Ccm.0B013E3182186D27  1
2011 Rubins KH, Hensley LE, Relman DA, Brown PO. Stunned silence: gene expression programs in human cells infected with monkeypox or vaccinia virus. Plos One. 6: e15615. PMID 21267444 DOI: 10.1371/Journal.Pone.0015615  1
2011 Morowitz MJ, Denef VJ, Costello EK, Thomas BC, Poroyko V, Relman DA, Banfield JF. Strain-resolved community genomic analysis of gut microbial colonization in a premature infant. Proceedings of the National Academy of Sciences of the United States of America. 108: 1128-33. PMID 21191099 DOI: 10.1073/Pnas.1010992108  1
2011 Pride DT, Sun CL, Salzman J, Rao N, Loomer P, Armitage GC, Banfield JF, Relman DA. Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time. Genome Research. 21: 126-36. PMID 21149389 DOI: 10.1101/Gr.111732.110  1
2011 Shimizu C, Jain S, Hibberd ML, Lin KO, Molkara D, Frazer JR, Sun S, Baker AL, Newburger JW, Rowley AH, Shulman ST, Davila S, Burgner D, Breunis WB, Kuijpers TW, ... ... Relman DA, et al. Transforming growth factor-β signaling pathway in patients with Kawasaki disease Circulation: Cardiovascular Genetics. 4: 16-25. PMID 21127203 DOI: 10.1161/Circgenetics.110.940858  1
2011 Dethlefsen L, Relman DA. Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation. Proceedings of the National Academy of Sciences of the United States of America. 108: 4554-61. PMID 20847294 DOI: 10.1073/Pnas.1000087107  1
2011 Willner D, Furlan M, Schmieder R, Grasis JA, Pride DT, Relman DA, Angly FE, McDole T, Mariella RP, Rohwer F, Haynes M. Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity. Proceedings of the National Academy of Sciences of the United States of America. 108: 4547-53. PMID 20547834 DOI: 10.1073/Pnas.1000089107  1
2011 Morowitz MJ, Denef VJ, Costello EK, Thomas BC, Poroyko V, Relman DA, Banfield JF. Strain-resolved community genomic analysis of gut microbial colonization in a premature infant (Proceedings of the National Academy of Sciences of the United States of America (2011) 108, 3 (1128-1133) DOI: 10.1073/pnas.1010992108) Proceedings of the National Academy of Sciences of the United States of America. 108: 4512. DOI: 10.1073/Pnas.1102689108  1
2010 Harrington ED, Arumugam M, Raes J, Bork P, Relman DA. SmashCell: a software framework for the analysis of single-cell amplified genome sequences. Bioinformatics (Oxford, England). 26: 2979-80. PMID 20966005 DOI: 10.1093/Bioinformatics/Btq564  1
2010 Cho MK, Relman DA. Genetic technologies. Synthetic "life," ethics, national security, and public discourse. Science (New York, N.Y.). 329: 38-9. PMID 20595601 DOI: 10.1126/Science.1193749  1
2010 DiGiulio DB, Gervasi M, Romero R, Mazaki-Tovi S, Vaisbuch E, Kusanovic JP, Seok KS, Gómez R, Mittal P, Gotsch F, Chaiworapongsa T, Oyarzún E, Kim CJ, Relman DA. Microbial invasion of the amniotic cavity in preeclampsia as assessed by cultivation and sequence-based methods. Journal of Perinatal Medicine. 38: 503-13. PMID 20482470 DOI: 10.1515/Jpm.2010.078  1
2010 DiGiulio DB, Gervasi MT, Romero R, Vaisbuch E, Mazaki-Tovi S, Kusanovic JP, Seok KS, Gómez R, Mittal P, Gotsch F, Chaiworapongsa T, Oyarzún E, Kim CJ, Relman DA. Microbial invasion of the amniotic cavity in pregnancies with small-for-gestational-age fetuses. Journal of Perinatal Medicine. 38: 495-502. PMID 20482466 DOI: 10.1515/Jpm.2010.076  1
2010 Waddell SJ, Popper SJ, Rubins KH, Griffiths MJ, Brown PO, Levin M, Relman DA. Dissecting interferon-induced transcriptional programs in human peripheral blood cells. Plos One. 5: e9753. PMID 20339534 DOI: 10.1371/Journal.Pone.0009753  1
2010 Bik EM, Long CD, Armitage GC, Loomer P, Emerson J, Mongodin EF, Nelson KE, Gill SR, Fraser-Liggett CM, Relman DA. Bacterial diversity in the oral cavity of 10 healthy individuals. The Isme Journal. 4: 962-74. PMID 20336157 DOI: 10.1038/Ismej.2010.30  1
2010 DiGiulio DB, Romero R, Kusanovic JP, Gómez R, Kim CJ, Seok KS, Gotsch F, Mazaki-Tovi S, Vaisbuch E, Sanders K, Bik EM, Chaiworapongsa T, Oyarzún E, Relman DA. Prevalence and diversity of microbes in the amniotic fluid, the fetal inflammatory response, and pregnancy outcome in women with preterm pre-labor rupture of membranes. American Journal of Reproductive Immunology (New York, N.Y. : 1989). 64: 38-57. PMID 20331587 DOI: 10.1111/J.1600-0897.2010.00830.X  1
2010 Relman DA. The biological century: coming to terms with risk in the life sciences. Nature Immunology. 11: 275-8. PMID 20300132 DOI: 10.1038/Ni0410-275  1
2010 Casadevall A, Relman DA. Microbial threat lists: obstacles in the quest for biosecurity? Nature Reviews. Microbiology. 8: 149-54. PMID 20065941 DOI: 10.1038/Nrmicro2299  1
2009 Popper SJ, Watson VE, Shimizu C, Kanegaye JT, Burns JC, Relman DA. Gene transcript abundance profiles distinguish Kawasaki disease from adenovirus infection. The Journal of Infectious Diseases. 200: 657-66. PMID 19583510 DOI: 10.1086/603538  1
2009 DiGiulio DB, Relman DA. Majority rules? Tallying the microbial census in an abscess by means of molecular methods. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 48: 1179-81. PMID 19335163 DOI: 10.1086/597579  1
2009 Julio SM, Inatsuka CS, Mazar J, Dieterich C, Relman DA, Cotter PA. Natural-host animal models indicate functional interchangeability between the filamentous haemagglutinins of Bordetella pertussis and Bordetella bronchiseptica and reveal a role for the mature C-terminal domain, but not the RGD motif, during infection. Molecular Microbiology. 71: 1574-90. PMID 19220744 DOI: 10.1111/J.1365-2958.2009.06623.X  1
2009 Dinalo JE, Relman DA. Cross-talk in the gut. Genome Biology. 10: 203. PMID 19216729 DOI: 10.1186/Gb-2009-10-1-203  1
2008 Relman DA. 'Til death do us part': coming to terms with symbiotic relationships. Forward. Nature Reviews. Microbiology. 6: 721-4. PMID 19086265 DOI: 10.1038/Nrmicro1990  1
2008 Abramson T, Kedem H, Relman DA. Modulation of the NF-kappaB pathway by Bordetella pertussis filamentous hemagglutinin. Plos One. 3: e3825. PMID 19043589 DOI: 10.1371/Journal.Pone.0003825  1
2008 Huse SM, Dethlefsen L, Huber JA, Mark Welch D, Welch DM, Relman DA, Sogin ML. Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing. Plos Genetics. 4: e1000255. PMID 19023400 DOI: 10.1371/Journal.Pgen.1000255  1
2008 Dethlefsen L, Huse S, Sogin ML, Relman DA. The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. Plos Biology. 6: e280. PMID 19018661 DOI: 10.1371/Journal.Pbio.0060280  1
2008 DiGiulio DB, Romero R, Amogan HP, Kusanovic JP, Bik EM, Gotsch F, Kim CJ, Erez O, Edwin S, Relman DA. Microbial prevalence, diversity and abundance in amniotic fluid during preterm labor: a molecular and culture-based investigation. Plos One. 3: e3056. PMID 18725970 DOI: 10.1371/Journal.Pone.0003056  1
2008 Rubins KH, Hensley LE, Bell GW, Wang C, Lefkowitz EJ, Brown PO, Relman DA. Comparative analysis of viral gene expression programs during poxvirus infection: a transcriptional map of the vaccinia and monkeypox genomes. Plos One. 3: e2628. PMID 18612436 DOI: 10.1371/Journal.Pone.0002628  1
2008 Medini D, Serruto D, Parkhill J, Relman DA, Donati C, Moxon R, Falkow S, Rappuoli R. Microbiology in the post-genomic era. Nature Reviews. Microbiology. 6: 419-30. PMID 18475305 DOI: 10.1038/Nrmicro1901  1
2008 Relman DA. Learning to appreciate our differences. The Journal of Infectious Diseases. 198: 4-5. PMID 18454681 DOI: 10.1086/588672  1
2008 Behrens S, Lösekann T, Pett-Ridge J, Weber PK, Ng WO, Stevenson BS, Hutcheon ID, Relman DA, Spormann AM. Linking microbial phylogeny to metabolic activity at the single-cell level by using enhanced element labeling-catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS. Applied and Environmental Microbiology. 74: 3143-50. PMID 18359832 DOI: 10.1128/Aem.00191-08  1
2008 Lawley TD, Bouley DM, Hoy YE, Gerke C, Relman DA, Monack DM. Host transmission of Salmonella enterica serovar Typhimurium is controlled by virulence factors and indigenous intestinal microbiota. Infection and Immunity. 76: 403-16. PMID 17967858 DOI: 10.1128/Iai.01189-07  1
2007 Popper SJ, Shimizu C, Shike H, Kanegaye JT, Newburger JW, Sundel RP, Brown PO, Burns JC, Relman DA. Gene-expression patterns reveal underlying biological processes in Kawasaki disease. Genome Biology. 8: R261. PMID 18067656 DOI: 10.1186/Gb-2007-8-12-R261  1
2007 Long CD, Turner-Shelef K, Relman DA. Building a better virus trap. Trends in Biotechnology. 25: 535-8. PMID 17997180 DOI: 10.1016/J.Tibtech.2007.08.013  1
2007 Dethlefsen L, McFall-Ngai M, Relman DA. An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature. 449: 811-8. PMID 17943117 DOI: 10.1038/Nature06245  1
2007 Rubins KH, Hensley LE, Wahl-Jensen V, Daddario DiCaprio KM, Young HA, Reed DS, Jahrling PB, Brown PO, Relman DA, Geisbert TW. The temporal program of peripheral blood gene expression in the response of nonhuman primates to Ebola hemorrhagic fever. Genome Biology. 8: R174. PMID 17725815 DOI: 10.1186/Gb-2007-8-8-R174  1
2007 Marcy Y, Ouverney C, Bik EM, Lösekann T, Ivanova N, Martin HG, Szeto E, Platt D, Hugenholtz P, Relman DA, Quake SR. Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth. Proceedings of the National Academy of Sciences of the United States of America. 104: 11889-94. PMID 17620602 DOI: 10.1073/Pnas.0704662104  1
2007 Palmer C, Bik EM, DiGiulio DB, Relman DA, Brown PO. Development of the human infant intestinal microbiota. Plos Biology. 5: e177. PMID 17594176 DOI: 10.1371/Journal.Pbio.0050177  1
2007 Gogol EB, Cummings CA, Burns RC, Relman DA. Phase variation and microevolution at homopolymeric tracts in Bordetella pertussis. Bmc Genomics. 8: 122. PMID 17509142 DOI: 10.1186/1471-2164-8-122  1
2007 Simmons CP, Popper S, Dolocek C, Chau TN, Griffiths M, Dung NT, Long TH, Hoang DM, Chau NV, Thao le TT, Hien TT, Relman DA, Farrar J. Patterns of host genome-wide gene transcript abundance in the peripheral blood of patients with acute dengue hemorrhagic fever. The Journal of Infectious Diseases. 195: 1097-107. PMID 17357045 DOI: 10.1086/512162  1
2007 Dethlefsen L, Relman DA. The importance of individuals and scale: moving towards single cell microbiology. Environmental Microbiology. 9: 8-10. PMID 17227405 DOI: 10.1111/J.1462-2920.2006.01222_8.X  1
2007 Eckburg PB, Relman DA. The role of microbes in Crohn's disease. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 44: 256-62. PMID 17173227 DOI: 10.1086/510385  1
2006 Diavatopoulos DA, Cummings CA, van der Heide HG, van Gent M, Liew S, Relman DA, Mooi FR. Characterization of a highly conserved island in the otherwise divergent Bordetella holmesii and Bordetella pertussis genomes. Journal of Bacteriology. 188: 8385-94. PMID 17041054 DOI: 10.1128/Jb.01081-06  1
2006 Nakamura MM, Liew SY, Cummings CA, Brinig MM, Dieterich C, Relman DA. Growth phase- and nutrient limitation-associated transcript abundance regulation in Bordetella pertussis. Infection and Immunity. 74: 5537-48. PMID 16988229 DOI: 10.1128/Iai.00781-06  1
2006 Brinig MM, Register KB, Ackermann MR, Relman DA. Genomic features of Bordetella parapertussis clades with distinct host species specificity. Genome Biology. 7: R81. PMID 16956413 DOI: 10.1186/Gb-2006-7-9-R81  1
2006 Dethlefsen L, Eckburg PB, Bik EM, Relman DA. Assembly of the human intestinal microbiota. Trends in Ecology & Evolution. 21: 517-23. PMID 16820245 DOI: 10.1016/J.Tree.2006.06.013  1
2006 Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, Gordon JI, Relman DA, Fraser-Liggett CM, Nelson KE. Metagenomic analysis of the human distal gut microbiome. Science (New York, N.Y.). 312: 1355-9. PMID 16741115 DOI: 10.1126/Science.1124234  1
2006 Liu M, Popper SJ, Rubins KH, Relman DA. Early days: genomics and human responses to infection. Current Opinion in Microbiology. 9: 312-9. PMID 16679048 DOI: 10.1016/J.Mib.2006.04.006  1
2006 Relman DA, Choffnes E, Lemon SM. In search of biosecurity. Science (New York, N.Y.). 311: 1835. PMID 16574824 DOI: 10.1126/Science.1127725  1
2006 Brinig MM, Cummings CA, Sanden GN, Stefanelli P, Lawrence A, Relman DA. Significant gene order and expression differences in Bordetella pertussis despite limited gene content variation. Journal of Bacteriology. 188: 2375-82. PMID 16547023 DOI: 10.1128/Jb.188.7.2375-2382.2006  1
2006 Cummings CA, Bootsma HJ, Relman DA, Miller JF. Species- and strain-specific control of a complex, flexible regulon by Bordetella BvgAS. Journal of Bacteriology. 188: 1775-85. PMID 16484188 DOI: 10.1128/Jb.188.5.1775-1785.2006  1
2006 Relman DA. Bioterrorism--preparing to fight the next war. The New England Journal of Medicine. 354: 113-5. PMID 16407505 DOI: 10.1056/Nejmp058078  1
2006 Palmer C, Bik EM, Eisen MB, Eckburg PB, Sana TR, Wolber PK, Relman DA, Brown PO. Rapid quantitative profiling of complex microbial populations. Nucleic Acids Research. 34: e5. PMID 16407321 DOI: 10.1093/Nar/Gnj007  1
2006 Bik EM, Eckburg PB, Gill SR, Nelson KE, Purdom EA, Francois F, Perez-Perez G, Blaser MJ, Relman DA. Molecular analysis of the bacterial microbiota in the human stomach. Proceedings of the National Academy of Sciences of the United States of America. 103: 732-7. PMID 16407106 DOI: 10.1073/Pnas.0506655103  1
2006 Choffnes ER, Lemon SM, Relman DA. A brave new world in the life sciences Bulletin of the Atomic Scientists. 62. DOI: 10.2968/062005009  1
2005 Diavatopoulos DA, Cummings CA, Schouls LM, Brinig MM, Relman DA, Mooi FR. Bordetella pertussis, the causative agent of whooping cough, evolved from a distinct, human-associated lineage of B. bronchiseptica. Plos Pathogens. 1: e45. PMID 16389302 DOI: 10.1371/Journal.Ppat.0010045  1
2005 Mai V, Stine OC, Morris JG, Eckburg PB, Bik EM, Bernstein CN, Dethlefsen L, Purdom E, Sargent M, Gill SR, Nelson KE, Relman DA. Timing in collection of stool samples [3] (multiple letters) Science. 310: 1118-1119. PMID 16293741 DOI: 10.1126/science.310.5751.1118  1
2005 Kampmann B, Hemingway C, Stephens A, Davidson R, Goodsall A, Anderson S, Nicol M, Schölvinck E, Relman D, Waddell S, Langford P, Sheehan B, Semple L, Wilkinson KA, Wilkinson RJ, et al. Acquired predisposition to mycobacterial disease due to autoantibodies to IFN-gamma. The Journal of Clinical Investigation. 115: 2480-8. PMID 16127458 DOI: 10.1172/Jci19316  1
2005 Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, Sargent M, Gill SR, Nelson KE, Relman DA. Diversity of the human intestinal microbial flora. Science (New York, N.Y.). 308: 1635-8. PMID 15831718 DOI: 10.1126/Science.1110591  1
2005 Diaz LS, Foster H, Stone MR, Fujimura S, Relman DA, Levy JA. VCAM-1 expression on CD8+ cells correlates with enhanced anti-HIV suppressing activity. Journal of Immunology (Baltimore, Md. : 1950). 174: 1574-9. PMID 15661918 DOI: 10.4049/Jimmunol.174.3.1574  1
2005 Fredricks DN, Relman DA. The infectious aetiology of disease: The search for new agents Medicine. 33: 37-38. DOI: 10.1383/Medc.  1
2004 Rubins KH, Hensley LE, Jahrling PB, Whitney AR, Geisbert TW, Huggins JW, Owen A, Leduc JW, Brown PO, Relman DA. The host response to smallpox: analysis of the gene expression program in peripheral blood cells in a nonhuman primate model. Proceedings of the National Academy of Sciences of the United States of America. 101: 15190-5. PMID 15477590 DOI: 10.1073/Pnas.0405759101  1
2004 Jahrling PB, Hensley LE, Martinez MJ, Leduc JW, Rubins KH, Relman DA, Huggins JW. Exploring the potential of variola virus infection of cynomolgus macaques as a model for human smallpox. Proceedings of the National Academy of Sciences of the United States of America. 101: 15196-200. PMID 15477589 DOI: 10.1073/Pnas.0405954101  1
2004 Lepp PW, Brinig MM, Ouverney CC, Palm K, Armitage GC, Relman DA. Methanogenic Archaea and human periodontal disease. Proceedings of the National Academy of Sciences of the United States of America. 101: 6176-81. PMID 15067114 DOI: 10.1073/Pnas.0308766101  1
2004 Shumilla JA, Lacaille V, Hornell TM, Huang J, Narasimhan S, Relman DA, Mellins ED. Bordetella pertussis infection of primary human monocytes alters HLA-DR expression. Infection and Immunity. 72: 1450-62. PMID 14977950 DOI: 10.1128/Iai.72.3.1450-1462.2004  1
2004 Cummings CA, Brinig MM, Lepp PW, van de Pas S, Relman DA. Bordetella species are distinguished by patterns of substantial gene loss and host adaptation. Journal of Bacteriology. 186: 1484-92. PMID 14973121 DOI: 10.1128/Jb.186.5.1484-1492.2004  1
2004 Pathan N, Hemingway CA, Alizadeh AA, Stephens AC, Boldrick JC, Oragui EE, McCabe C, Welch SB, Whitney A, O'Gara P, Nadel S, Relman DA, Harding SE, Levin M. Role of interleukin 6 in myocardial dysfunction of meningococcal septic shock. Lancet (London, England). 363: 203-9. PMID 14738793 DOI: 10.1016/S0140-6736(03)15326-3  1
2003 Petro JB, Relman DA. Understanding Threats to Scientific Openness Science. 302: 1898. PMID 14671279 DOI: 10.1126/Science.1092493  1
2003 Relman DA. Shedding Light on Microbial Detection New England Journal of Medicine. 349: 2162-2163. PMID 14645646 DOI: 10.1056/Nejmcibr035737  1
2003 Ouverney CC, Armitage GC, Relman DA. Single-cell enumeration of an uncultivated TM7 subgroup in the human subgingival crevice. Applied and Environmental Microbiology. 69: 6294-8. PMID 14532094 DOI: 10.1128/Aem.69.10.6294-6298.2003  1
2003 Maiwald M, von Herbay A, Fredricks DN, Ouverney CC, Kosek JC, Relman DA. Cultivation of Tropheryma whipplei from cerebrospinal fluid. The Journal of Infectious Diseases. 188: 801-8. PMID 12964110 DOI: 10.1086/378073  1
2003 Olson PD, Yoder K, Fajardo L-G LF, Marty AM, van de Pas S, Olivier C, Relman DA. Lethal invasive cestodiasis in immunosuppressed patients. The Journal of Infectious Diseases. 187: 1962-6. PMID 12792874 DOI: 10.1086/375357  1
2003 Maiwald M, Lepp PW, Relman DA. Analysis of conserved non-rRNA genes of Tropheryma whipplei Systematic and Applied Microbiology. 26: 3-12. PMID 12747404 DOI: 10.1078/072320203322337254  1
2003 Brinig MM, Lepp PW, Ouverney CC, Armitage GC, Relman DA. Prevalence of bacteria of division TM7 in human subgingival plaque and their association with disease. Applied and Environmental Microbiology. 69: 1687-94. PMID 12620860 DOI: 10.1128/Aem.69.3.1687-1694.2003  1
2003 Bentley SD, Maiwald M, Murphy LD, Pallen MJ, Yeats CA, Dover LG, Norbertczak HT, Besra GS, Quail MA, Harris DE, von Herbay A, Goble A, Rutter S, Squares R, Squares S, ... ... Relman DA, et al. Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei. Lancet (London, England). 361: 637-44. PMID 12606174 DOI: 10.1016/S0140-6736(03)12597-4  1
2003 Whitney AR, Diehn M, Popper SJ, Alizadeh AA, Boldrick JC, Relman DA, Brown PO. Individuality and variation in gene expression patterns in human blood. Proceedings of the National Academy of Sciences of the United States of America. 100: 1896-901. PMID 12578971 DOI: 10.1073/Pnas.252784499  1
2003 Rubins K, Relman DA. Progression of the lesion at the site of inoculation after smallpox vaccination New England Journal of Medicine. 348: 414. PMID 12556544 DOI: 10.1056/Nejmicm020924  1
2003 Eckburg PB, Lepp PW, Relman DA. Archaea and their potential role in human disease Infection and Immunity. 71: 591-596. PMID 12540534 DOI: 10.1128/Iai.71.2.591-596.2003  1
2003 Artenstein AW, Rubins K, Relman DA. Smallpox vaccination [2] (multiple letters) New England Journal of Medicine. 348: 1925. DOI: 10.1056/NEJM200305083481915  1
2002 Neilan BA, Burns BP, Relman DA, Lowe DR. Molecular identification of cyanobacteria associated with stromatolites from distinct geographical locations. Astrobiology. 2: 271-80. PMID 12530237 DOI: 10.1089/153110702762027853  1
2002 Ishibashi Y, Yoshimura K, Nishikawa A, Claus S, Laudanna C, Relman DA. Role of phosphatidylinositol 3-kinase in the binding of Bordetella pertussis to human monocytes Cellular Microbiology. 4: 825-833. PMID 12464013 DOI: 10.1046/J.1462-5822.2002.00235.X  1
2002 Relman DA. New technologies, human-microbe interactions, and the search for previously unrecognized pathogens Journal of Infectious Diseases. 186. PMID 12424706 DOI: 10.1086/344935  1
2002 Relman DA. Genome-wide responses of a pathogenic bacterium to its host Journal of Clinical Investigation. 110: 1071-1073. PMID 12393841 DOI: 10.1172/Jci16944  1
2002 Relman DA. Mining the natural world for new pathogens American Journal of Tropical Medicine and Hygiene. 67: 133-134. PMID 12389934 DOI: 10.4269/Ajtmh.2002.67.133  1
2002 LeDuc JW, Damon I, Meegan JM, Relman DA, Huggins J, Jahrling PB. Smallpox research activities: U.S. interagency collaboration, 2001 Emerging Infectious Diseases. 8: 743-745. PMID 12095449 DOI: 10.3201/Eid0807.020032  1
2002 Cummings CA, Relman DA. Genomics and microbiology. Microbial forensics--"cross-examining pathogens". Science (New York, N.Y.). 296: 1976-9. PMID 12004075 DOI: 10.1126/Science.1073125  1
2002 Nikkari S, Lopez FA, Lepp PW, Cieslak PR, Ladd-Wilson S, Passaro D, Danila R, Relman DA. Broad-range bacterial detection and the analysis of unexplained death and critical illness Emerging Infectious Diseases. 8: 188-194. PMID 11897072 DOI: 10.3201/Eid0802.010150  1
2002 Nikkari S, Gotoff R, Bourbeau PP, Brown RE, Kamal NR, Relman DA. Identification of Cardiobacterium hominis by broad-range bacterial polymerase chain reaction analysis in a case of culture-negative endocarditis Archives of Internal Medicine. 162: 477-479. PMID 11863484 DOI: 10.1001/Archinte.162.4.477  1
2002 Relman DA. The human body as microbial observatory Nature Genetics. 30: 131-133. PMID 11818955 DOI: 10.1038/Ng0202-131  1
2002 Boldrick JC, Alizadeh AA, Diehn M, Dudoit S, Liu CL, Belcher CE, Botstein D, Staudt LM, Brown PO, Relman DA. Stereotyped and specific gene expression programs in human innate immune responses to bacteria. Proceedings of the National Academy of Sciences of the United States of America. 99: 972-7. PMID 11805339 DOI: 10.1073/Pnas.231625398  1
2002 Fredricks DN, Martin TM, Edwards AO, Rosenbaum JT, Relman DA. Human herpesvirus 8 and sarcoidosis [4] Clinical Infectious Diseases. 34: 559-560. PMID 11797191 DOI: 10.1086/338406  1
2002 Relman DA, Olson JE. Smallpox: A brief overview Consultant. 42.  1
2002 Relman DA, Olson JE. Ricin and staphylococcal enterotoxin B: Potential biologic weapons Consultant. 42: 370-371.  1
2002 Relman DA, Olson JE. Tularemia: A brief overview Consultant. 42: 56.  1
2002 Relman DA, Olson JE. Bioterrorism preparedness: Would you be ready? Consultant. 42: 25-32.  1
2002 Relman DA, Olson JE. Plague: What you need to know now Consultant. 42: 33.  1
2001 Olivier C, Van De Pas S, Lepp PW, Yoder K, Relman DA. Sequence variability in the first internal transcribed spacer region within and among Cyclospora species is consistent with polyparasitism International Journal For Parasitology. 31: 1475-1487. PMID 11595235 DOI: 10.1016/S0020-7519(01)00283-1  1
2001 Ishibashi Y, Relman DA, Nishikawa A. Invasion of human respiratory epithelial cells by Bordetella pertussis: Possible role for a filamentous hemagglutinin Arg-Gly-Asp sequence and α5β1 integrin Microbial Pathogenesis. 30: 279-288. PMID 11373122 DOI: 10.1006/Mpat.2001.0432  1
2001 Relman DA, Falkow S. The meaning and impact of the human genome sequence for microbiology. Trends in Microbiology. 9: 206-8. PMID 11336835 DOI: 10.1016/S0966-842X(01)02041-8  1
2001 Nikkari S, McLaughlin IJ, Bi W, Dodge DE, Relman DA. Does blood of healthy subjects contain bacterial ribosomal DNA? Journal of Clinical Microbiology. 39: 1956-1959. PMID 11326021 DOI: 10.1128/Jcm.39.5.1956-1959.2001  1
2001 Fredricks DN, Relman DA. Localization of Tropheryma whippelii rRNA in tissues from patients with Whipple's disease Journal of Infectious Diseases. 183: 1229-1237. PMID 11262205 DOI: 10.1086/319684  1
2001 Abramson T, Kedem H, Relman DA. Proinflammatory and proapoptotic activities associated with Bordetella pertussis filamentous hemagglutinin Infection and Immunity. 69: 2650-2658. PMID 11254631 DOI: 10.1128/Iai.69.4.2650-2658.2001  1
2001 Maiwald M, Von Herbay A, Persing DH, Mitchell PS, Abdelmalek MF, Thorvilson JN, Fredricks DN, Relman DA. Tropheryma whippelii DNA is rare in the intestinal mucosa of patients without other evidence of Whipple disease Annals of Internal Medicine. 134: 115-119. PMID 11177314 DOI: 10.7326/0003-4819-134-2-200101160-00011  1
2001 Diehn M, Relman DA. Comparing functional genomic datasets: lessons from DNA microarray analyses of host-pathogen interactions. Current Opinion in Microbiology. 4: 95-101. PMID 11173041 DOI: 10.1016/S1369-5274(00)00171-5  1
2001 Maiwald M, Relman DA. Whipple's disease and Tropheryma whippelii: Secrets slowly revealed Clinical Infectious Diseases. 32: 457-463. PMID 11170954 DOI: 10.1086/318512  1
2001 Relman DA, Olson JE. Bioterrorism preparedness: What practitioners need to know Infections in Medicine. 18: 497-514.  1
2000 Belcher CE, Drenkow J, Kehoe B, Gingeras TR, McNamara N, Lemjabbar H, Basbaum C, Relman DA. The transcriptional responses of respiratory epithelial cells to Bordetella pertussis reveal host defensive and pathogen counter-defensive strategies Proceedings of the National Academy of Sciences of the United States of America. 97: 13847-13852. PMID 11087813 DOI: 10.1073/Pnas.230262797  1
2000 Cummings CA, Relman DA. Using DNA microarrays to study host-microbe interactions. Emerging Infectious Diseases. 6: 513-25. PMID 10998383 DOI: 10.3201/Eid0605.000511  1
2000 Tompkins LS, Schachter J, Boman J, Chernesky MA, Dowell S, Gaydos CA, Levison ME, Maass M, Madico G, Orfila J, Ouchi K, Peeling RW, Taylor-Robinson D, Stamm WE, Wang SP, ... ... Relman D, et al. Collaborative multidisciplinary workshop report: detection, culture, serology, and antimicrobial susceptibility testing of Chlamydia pneumoniae. The Journal of Infectious Diseases. 181: S460-1. PMID 10839740 DOI: 10.1086/315599  1
2000 Jacob-Dubuisson F, Kehoe B, Willery E, Reveneau N, Locht C, Relman DA. Molecular characterization of Bordetella bronchiseptica filamentous haemagglutinin and its secretion machinery Microbiology. 146: 1211-1221. PMID 10832649 DOI: 10.1099/00221287-146-5-1211  1
2000 Fredricks DN, Jolley JA, Lepp PW, Kosek JC, Relman DA. Rhinosporidium seeberi: a human pathogen from a novel group of aquatic protistan parasites. Emerging Infectious Diseases. 6: 273-82. PMID 10827117 DOI: 10.3201/Eid0603.000307  1
2000 Maiwald M, Von Herbay A, Lepp PW, Relman DA. Organization, structure, and variability of the rRNA operon of the Whipple's disease bacterium (Tropheryma whippelii) Journal of Bacteriology. 182: 3292-3297. PMID 10809715 DOI: 10.1128/Jb.182.11.3292-3297.2000  1
2000 Manger ID, Relman DA. How the host 'sees' pathogens: Global gene expression responses to infection Current Opinion in Immunology. 12: 215-218. PMID 10712949 DOI: 10.1016/S0952-7915(99)00077-1  1
2000 Olson JE, Relman DA. Biologic weapons: What infectious diseases practitioners need to know Infections in Medicine. 17: 29-44.  1
1999 Kroes I, Lepp PW, Relman DA. Bacterial diversity within the human subgingival crevice Proceedings of the National Academy of Sciences of the United States of America. 96: 14547-14552. PMID 10588742 DOI: 10.1073/Pnas.96.25.14547  1
1999 Fredricks DN, Relman DA. Application of polymerase chain reaction to the diagnosis of infectious diseases Clinical Infectious Diseases. 29: 475-488. PMID 10530433 DOI: 10.1086/598618  1
1999 Relman DA, Fredricks DN, Yoder KE, Mirowski G, Berger T, Koehler JE. Absence of Kaposi's sarcoma-associated herpesvirus DNA in bacillary angiomatosis-peliosis lesions Journal of Infectious Diseases. 180: 1386-1389. PMID 10479179 DOI: 10.1086/314975  1
1999 Relman DA. The search for unrecognized pathogens Science. 284: 1308-1310. PMID 10334977 DOI: 10.1126/Science.284.5418.1308  1
1999 Fredricks DN, Relman DA. Paraffin removal from tissue sections for digestion and PCR analysis Biotechniques. 26: 198-200. PMID 10023524 DOI: 10.2144/99262Bm04  1
1999 Lopez FA, Manglicmot J, Schmidt TM, Yeh C, Smith HV, Relman DA. Molecular characterization of Cyclospora-like organisms from baboons. The Journal of Infectious Diseases. 179: 670-6. PMID 9952374 DOI: 10.1086/314645  1
1999 Nikkari S, Relman DA. Molecular approaches for identification of infectious agents in Wegener's granulomatosis and other vasculitides Current Opinion in Rheumatology. 11: 11-16. PMID 9894625 DOI: 10.1097/00002281-199901000-00003  1
1998 Cotter PA, Yuk MH, Mattoo S, Akerley BJ, Boschwitz J, Relman DA, Miller JF. Filamentous hemagglutinin of Bordetella bronchiseptica is required for efficient establishment of tracheal colonization. Infection and Immunity. 66: 5921-9. PMID 9826374 DOI: 10.1128/Iai.66.12.5921-5929.1998  1
1998 Fredricks DN, Relman DA. Infectious agents and the etiology of chronic idiopathic diseases Current Clinical Topics in Infectious Diseases. 180-200. PMID 9779355  1
1998 Fredricks DN, Relman DA. Improved amplification of microbial DNA from blood cultures by removal of the PCR inhibitor sodium polyanetholesulfonate Journal of Clinical Microbiology. 36: 2810-2816. PMID 9738025 DOI: 10.1128/Jcm.36.10.2810-2816.1998  1
1998 Petrides PE, Müller-Höcker J, Fredricks DN, Relman DA. PCR analysis of T. whippelii DNA in a case of Whipple's disease: Effect of antibiotics and correlation with histology American Journal of Gastroenterology. 93: 1579-1582. PMID 9732952 DOI: 10.1111/J.1572-0241.1998.00416.X  1
1998 Relman DA. The 'emergence' of Bartonella and the development of molecular discovery methods for microbial pathogens Netherlands Journal of Medicine. 52: 249-255. PMID 9718924 DOI: 10.1016/S0300-2977(98)00039-4  1
1998 Perkins BA, Relman D. Explaining the unexplained in clinical infectious diseases: Looking forward Emerging Infectious Diseases. 4: 395-397. PMID 9716953 DOI: 10.3201/Eid0403.980312  1
1998 Relman DA. Detection and identification of previously unrecognized microbial pathogens Emerging Infectious Diseases. 4: 382-389. PMID 9716951 DOI: 10.3201/Eid0403.980310  1
1998 Relman DA. Are all Bartonella henselae strains created equal? Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 26: 1300-1301. PMID 9636851 DOI: 10.1086/516347  1
1998 Baorto E, Payne RM, Slater LN, Lopez F, Relman DA, Min KW, St. Geme JW. Culture-negative endocarditis caused by Bartonella henselae Journal of Pediatrics. 132: 1051-1054. PMID 9627605 DOI: 10.1016/S0022-3476(98)70410-X  1
1998 Soave R, Herwaldt BL, Relman DA. Cyclospora Infectious Disease Clinics of North America. 12: 1-12. PMID 9494825 DOI: 10.1016/S0891-5520(05)70404-9  1
1998 Stark P, Relman DA, Santamaria-Fries M, Luis Felipe Fajardo LG. Case report. Radiologic features of a fatal platyhelminth (tapeworm) infection in an AIDS patient American Journal of Roentgenology. 170: 136-138.  1
1997 Boschwitz JS, Van der Heide HGJ, Mooi FR, Relman DA. Bordetella bronchiseptica expresses the fimbrial structural subunit gene fimA Journal of Bacteriology. 179: 7882-7885. PMID 9401052 DOI: 10.1128/Jb.179.24.7882-7885.1997  1
1997 Fredricks DN, Relman DA. Cultivation of Whipple bacillus: The irony and the ecstasy Lancet. 350: 1262-1263. PMID 9357400 DOI: 10.1016/S0140-6736(97)22044-1  1
1997 Relman DA. Editorial: The whipple bacillus lives (Ex Vivo)! Journal of Infectious Diseases. 176: 752-754. PMID 9291325 DOI: 10.1086/514100  1
1997 Boschwitz JS, Batanghari JW, Kedem H, Relman DA. Bordetella pertussis infection of human monocytes inhibits antigen- dependent CD4 T cell proliferation Journal of Infectious Diseases. 176: 678-686. PMID 9291315 DOI: 10.1086/514090  1
1997 Lynch T, Odel J, Fredericks DN, Louis ED, Forman S, Rotterdam H, Fahn S, Relman DA. Polymerase chain reaction-based detection of Tropheryma whippelii in central nervous system Whipple's disease. Annals of Neurology. 42: 120-4. PMID 9225695 DOI: 10.1002/Ana.410420120  1
1997 Relman DA. Emerging infections and newly-recognised pathogens Netherlands Journal of Medicine. 50: 216-220. PMID 9175403 DOI: 10.1016/S0300-2977(97)00016-8  1
1997 Ramzan NN, Loftus E, Burgart LJ, Rooney M, Batts KP, Wiesner RH, Fredricks DN, Relman DA, Persing DH. Diagnosis and monitoring of Whipple disease by polymerase chain reaction Annals of Internal Medicine. 126: 520-527. PMID 9092317 DOI: 10.7326/0003-4819-126-7-199704010-00004  1
1997 Lofez FA, Manglicmot J, Yeh C, Smith H, Relman DA. Molecular characterization of baboon-associated Cyclospora-like oocysts Clinical Infectious Diseases. 25: 428.  1
1997 Denney CF, Ikeda RK, Colt HG, Lopez FA, Relman DA, Fierer J. Pleural bacillary angiomatosis in the acquired immunodeficiency syndrome Clinical Infectious Diseases. 25: 460.  1
1996 Marth T, Fredricks D, Strober W, Relman DA. Limited role for PCR-based diagnosis of Whipple's disease from peripheral blood mononuclear cells [18] Lancet. 348: 66-67. PMID 8691962 DOI: 10.1016/S0140-6736(05)64400-5  1
1996 Santamaría-Fríes M, Fajardo L-G LF, Sogin ML, Olson PD, Relman DA. Lethal infection by a previously unrecognised metazoan parasite Lancet. 347: 1797-1801. PMID 8667924 DOI: 10.1016/S0140-6736(96)91618-9  1
1996 Relman DA, Schmidt TM, Gajadhar A, Sogin M, Cross J, Yoder K, Sethabutr O, Echeverria P. Molecular phylogenetic analysis of Cyclospora, the human intestinal pathogen, suggests that it is closely related to Eimeria species. The Journal of Infectious Diseases. 173: 440-5. PMID 8568307 DOI: 10.1093/Infdis/173.2.440  1
1996 Relman DA. Advances in the diagnosis of uveitis Investigative Ophthalmology and Visual Science. 37.  1
1994 Schmidt TM, Relman DA. Phylogenetic identification of uncultured pathogens using ribosomal RNA sequences. Methods in Enzymology. 235: 205-22. PMID 7520119 DOI: 10.1016/0076-6879(94)35142-2  1
1993 Relman DA, Koehler JE, Brenner DJ. Isolation of Rochalimaea species [3] New England Journal of Medicine. 328: 1422-1423. PMID 7682656 DOI: 10.1056/NEJM199305133281912  1
1992 Relman DA, Lepp PW, Sadler KN, Schmidt TM. Phylogenetic relationships among the agent of bacillary angiomatosis, Bartonella bacilliformis, and other alpha-proteobacteria. Molecular Microbiology. 6: 1801-7. PMID 1378524 DOI: 10.1111/J.1365-2958.1992.Tb01352.X  1
1992 Relman DA, Schmidt TM, MacDermott RP, Falkow S. Identification of the uncultured bacillus of Whipple's disease. The New England Journal of Medicine. 327: 293-301. PMID 1377787 DOI: 10.1056/Nejm199207303270501  1
1991 Relman DA, Falkow S, LeBoit PE, Perkocha LA, Min KW, Welch DF, Slater LN. The organism causing bacillary angiomatosis, peliosis hepatis, and fever and bacteremia in immunocompromised patients. The New England Journal of Medicine. 324: 1514. PMID 2023615 DOI: 10.1056/Nejm199105233242117  1
1991 Birtles RJ, Harrison TG, Taylor AG, Relman DA, Schmidt TM, Cockerell CJ, Tierno PM, Friedman-Kien AE, Kim KS. The causative agent of bacillary angiomatosis [4] New England Journal of Medicine. 325: 1447-1448. PMID 1922261 DOI: 10.1056/Nejm199111143252014  1
1990 Domenighini M, Relman D, Capiau C, Falkow S, Prugnola A, Scarlato V, Rappuoli R. Genetic characterization of Bordetella pertussis filamentous haemagglutinin: a protein processed from an unusually large precursor. Molecular Microbiology. 4: 787-800. PMID 2388559 DOI: 10.1111/J.1365-2958.1990.Tb00649.X  1
1990 Relman D, Tuomanen E, Falkow S, Golenbock DT, Saukkonen K, Wright SD. Recognition of a bacterial adhesion by an integrin: macrophage CR3 (alpha M beta 2, CD11b/CD18) binds filamentous hemagglutinin of Bordetella pertussis. Cell. 61: 1375-82. PMID 2364431 DOI: 10.1016/0092-8674(90)90701-F  1
1990 Kimura A, Mountzouros KT, Relman DA, Falkow S, Cowell JL. Bordetella pertussis filamentous hemagglutinin: evaluation as a protective antigen and colonization factor in a mouse respiratory infection model. Infection and Immunity. 58: 7-16. PMID 2294058 DOI: 10.1128/Iai.58.1.7-16.1990  1
1990 Relman DA, Loutit JS, Schmidt TM, Falkow S, Tompkins LS. The agent of bacillary angiomatosis. An approach to the identification of uncultured pathogens. The New England Journal of Medicine. 323: 1573-80. PMID 2233945 DOI: 10.1056/Nejm199012063232301  1
1989 Relman DA, Domenighini M, Tuomanen E, Rappuoli R, Falkow S. Filamentous hemagglutinin of Bordetella pertussis: nucleotide sequence and crucial role in adherence. Proceedings of the National Academy of Sciences of the United States of America. 86: 2637-41. PMID 2539596 DOI: 10.1073/Pnas.86.8.2637  1
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