Mark R. Liles - Publications

Affiliations: 
Auburn University, Auburn, AL, United States 
Area:
Microbiology Biology, Molecular Biology, Genetics

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Hassan MK, McInroy JA, Jones J, Shantharaj D, Liles MR, Kloepper JW. Pectin-Rich Amendment Enhances Soybean Growth Promotion and Nodulation Mediated by Strains. Plants (Basel, Switzerland). 8. PMID 31075893 DOI: 10.3390/plants8050120  0.44
2018 Nasrin S, Ganji S, Kakirde KS, Jacob MR, Wang M, Ravu RR, Cobine PA, Khan IA, Wu CC, Mead DA, Li XC, Liles MR. Chloramphenicol Derivatives with Antibacterial Activity Identified by Functional Metagenomics. Journal of Natural Products. PMID 29897754 DOI: 10.1021/acs.jnatprod.7b00903  0.8
2016 Newman MM, Lorenz N, Hoilett N, Lee NR, Dick RP, Liles MR, Ramsier C, Kloepper JW. Changes in rhizosphere bacterial gene expression following glyphosate treatment. The Science of the Total Environment. 553: 32-41. PMID 26901800 DOI: 10.1016/j.scitotenv.2016.02.078  0.76
2015 Newman MM, Hoilett N, Lorenz N, Dick RP, Liles MR, Ramsier C, Kloepper JW. Glyphosate effects on soil rhizosphere-associated bacterial communities. The Science of the Total Environment. 543: 155-160. PMID 26580738 DOI: 10.1016/j.scitotenv.2015.11.008  0.76
2015 Fasina YO, Newman MM, Stough JM, Liles MR. Effect of Clostridium perfringens infection and antibiotic administration on microbiota in the small intestine of broiler chickens. Poultry Science. PMID 26567176 DOI: 10.3382/ps/pev329  0.76
2015 Hossain MJ, Ran C, Liu K, Ryu CM, Rasmussen-Ivey CR, Williams MA, Hassan MK, Choi SK, Jeong H, Newman M, Kloepper JW, Liles MR. Deciphering the conserved genetic loci implicated in plant disease control through comparative genomics of Bacillus amyloliquefaciens subsp. plantarum. Frontiers in Plant Science. 6: 631. PMID 26347755 DOI: 10.3389/fpls.2015.00631  0.44
2015 Newman MM, Liles MR, Feminella JW. Litter Breakdown and Microbial Succession on Two Submerged Leaf Species in a Small Forested Stream. Plos One. 10: e0130801. PMID 26098687 DOI: 10.1371/journal.pone.0130801  0.76
2015 Ravu RR, Jacob MR, Chen X, Wang M, Nasrin S, Kloepper JW, Liles MR, Mead DA, Khan IA, Li XC. Bacillusin A, an Antibacterial Macrodiolide from Bacillus amyloliquefaciens AP183. Journal of Natural Products. 78: 924-8. PMID 25756620 DOI: 10.1021/np500911k  0.44
2015 Zhou J, Sun D, Childers A, McDermott TR, Wang Y, Liles MR. Three novel virophage genomes discovered from Yellowstone Lake metagenomes. Journal of Virology. 89: 1278-85. PMID 25392206 DOI: 10.1128/JVI.03039-14  0.76
2014 Chander Y, Koelbl J, Puckett J, Moser MJ, Klingele AJ, Liles MR, Carrias A, Mead DA, Schoenfeld TW. A novel thermostable polymerase for RNA and DNA loop-mediated isothermal amplification (LAMP). Frontiers in Microbiology. 5: 395. PMID 25136338 DOI: 10.3389/fmicb.2014.00395  0.76
2014 Hossain MJ, Sun D, McGarey DJ, Wrenn S, Alexander LM, Martino ME, Xing Y, Terhune JS, Liles MR. An Asian origin of virulent Aeromonas hydrophila responsible for disease epidemics in United States-farmed catfish. Mbio. 5: e00848-14. PMID 24895303 DOI: 10.1128/mBio.00848-14  0.76
2013 Hossain MJ, Waldbieser GC, Sun D, Capps NK, Hemstreet WB, Carlisle K, Griffin MJ, Khoo L, Goodwin AE, Sonstegard TS, Schroeder S, Hayden K, Newton JC, Terhune JS, Liles MR. Implication of lateral genetic transfer in the emergence of Aeromonas hydrophila isolates of epidemic outbreaks in channel catfish. Plos One. 8: e80943. PMID 24278351 DOI: 10.1371/journal.pone.0080943  0.76
2013 Zheng H, Chatfield CH, Liles MR, Cianciotto NP. Secreted pyomelanin of Legionella pneumophila promotes bacterial iron uptake and growth under iron-limiting conditions. Infection and Immunity. 81: 4182-91. PMID 23980114 DOI: 10.1128/IAI.00858-13  0.76
2013 Engel K, Ashby D, Brady SF, Cowan DA, Doemer J, Edwards EA, Fiebig K, Martens EC, McCormac D, Mead DA, Miyazaki K, Moreno-Hagelsieb G, O'Gara F, Reid A, Rose DR, ... ... Liles MR, et al. Meeting report: 1st international functional metagenomics workshop may 7-8, 2012, st. Jacobs, ontario, Canada. Standards in Genomic Sciences. 8: 106-11. PMID 23961315 DOI: 10.4056/sigs.3406845  0.76
2012 Ran C, Carrias A, Williams MA, Capps N, Dan BC, Newton JC, Kloepper JW, Ooi EL, Browdy CL, Terhune JS, Liles MR. Identification of Bacillus strains for biological control of catfish pathogens. Plos One. 7: e45793. PMID 23029244 DOI: 10.1371/journal.pone.0045793  0.76
2012 Morrow KM, Ritson-Williams R, Ross C, Liles MR, Paul VJ. Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals. Plos One. 7: e44859. PMID 23028648 DOI: 10.1371/journal.pone.0044859  0.76
2012 Morrow KM, Moss AG, Chadwick NE, Liles MR. Bacterial associates of two Caribbean coral species reveal species-specific distribution and geographic variability. Applied and Environmental Microbiology. 78: 6438-49. PMID 22773636 DOI: 10.1128/AEM.01162-12  0.76
2011 Zhou P, Hussain SK, Liles MR, Arias CR, Backert S, Kieninger J, Oyarzabal OA. A simplified and cost-effective enrichment protocol for the isolation of Campylobacter spp. from retail broiler meat without microaerobic incubation. Bmc Microbiology. 11: 175. PMID 21812946 DOI: 10.1186/1471-2180-11-175  0.76
2011 Parsley LC, Linneman J, Goode AM, Becklund K, George I, Goodman RM, Lopanik NB, Liles MR. Polyketide synthase pathways identified from a metagenomic library are derived from soil Acidobacteria. Fems Microbiology Ecology. 78: 176-87. PMID 21539584 DOI: 10.1111/j.1574-6941.2011.01122.x  0.76
2011 Kakirde KS, Wild J, Godiska R, Mead DA, Wiggins AG, Goodman RM, Szybalski W, Liles MR. Gram negative shuttle BAC vector for heterologous expression of metagenomic libraries. Gene. 475: 57-62. PMID 21112378 DOI: 10.1016/j.gene.2010.11.004  0.76
2010 Kakirde KS, Parsley LC, Liles MR. Size Does Matter: Application-driven Approaches for Soil Metagenomics. Soil Biology & Biochemistry. 42: 1911-1923. PMID 21076656 DOI: 10.1016/j.soilbio.2010.07.021  0.92
2010 Parsley LC, Newman MM, Liles MR. Fluorescence in situ hybridization of bacterial cell suspensions. Cold Spring Harbor Protocols. 2010: pdb.prot5493. PMID 20810640  0.92
2010 Parsley LC, Consuegra EJ, Kakirde KS, Land AM, Harper WF, Liles MR. Identification of diverse antimicrobial resistance determinants carried on bacterial, plasmid, or viral metagenomes from an activated sludge microbial assemblage. Applied and Environmental Microbiology. 76: 3753-7. PMID 20382816 DOI: 10.1128/AEM.03080-09  0.76
2010 Parsley LC, Consuegra EJ, Thomas SJ, Bhavsar J, Land AM, Bhuiyan NN, Mazher MA, Waters RJ, Wommack KE, Harper WF, Liles MR. Census of the viral metagenome within an activated sludge microbial assemblage. Applied and Environmental Microbiology. 76: 2673-7. PMID 20154108 DOI: 10.1128/AEM.02520-09  0.76
2010 Newman MM, Feminella JW, Liles MR. Purification of genomic DNA extracted from environmental sources for use in a polymerase chain reaction. Cold Spring Harbor Protocols. 2010: pdb.prot5383. PMID 20150146 DOI: 10.1101/pdb.prot5383  0.92
2009 Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Parsley LC, Goodman RM, Handelsman J. Isolation and cloning of high-molecular-weight metagenomic DNA from soil microorganisms. Cold Spring Harbor Protocols. 2009: pdb.prot5271. PMID 20147247 DOI: 10.1101/pdb.prot5271  0.76
2009 George IF, Liles MR, Hartmann M, Ludwig W, Goodman RM, Agathos SN. Changes in soil Acidobacteria communities after 2,4,6-trinitrotoluene contamination. Fems Microbiology Letters. 296: 159-66. PMID 19459956 DOI: 10.1111/j.1574-6968.2009.01632.x  0.76
2008 Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Goodman RM, Handelsman J. Recovery, purification, and cloning of high-molecular-weight DNA from soil microorganisms. Applied and Environmental Microbiology. 74: 3302-5. PMID 18359830 DOI: 10.1128/AEM.02630-07  0.76
2006 Sabree ZL, Bergendahl V, Liles MR, Burgess RR, Goodman RM, Handelsman J. Identification and characterization of the gene encoding the Acidobacterium capsulatum major sigma factor. Gene. 376: 144-51. PMID 16698197 DOI: 10.1016/j.gene.2006.02.033  0.76
2003 Liles MR, Manske BF, Bintrim SB, Handelsman J, Goodman RM. A census of rRNA genes and linked genomic sequences within a soil metagenomic library. Applied and Environmental Microbiology. 69: 2684-91. PMID 12732537 DOI: 10.1128/AEM.69.5.2684-2691.2003  0.76
2002 Nelson BP, Liles MR, Frederick KB, Corn RM, Goodman RM. Label-free detection of 16S ribosomal RNA hybridization on reusable DNA arrays using surface plasmon resonance imaging. Environmental Microbiology. 4: 735-43. PMID 12460281 DOI: 10.1046/j.1462-2920.2002.00350.x  0.76
2002 Gillespie DE, Brady SF, Bettermann AD, Cianciotto NP, Liles MR, Rondon MR, Clardy J, Goodman RM, Handelsman J. Isolation of antibiotics turbomycin a and B from a metagenomic library of soil microbial DNA. Applied and Environmental Microbiology. 68: 4301-6. PMID 12200279 DOI: 10.1128/AEM.68.9.4301-4306.2002  0.76
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