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Mark R. Liles - Publications

Affiliations: 
Auburn University, Auburn, AL, United States 
Area:
Microbiology Biology, Molecular Biology, Genetics
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Year Citation  Score
2023 Xu T, Rasmussen-Ivey CR, Moen FS, Fernández-Bravo A, Lamy B, Beaz-Hidalgo R, Khan CD, Castro Escarpulli G, Yasin ISM, Figueras MJ, Azzam-Sayuti M, Karim MM, Alam KMM, Le TTT, Thao NHP, ... ... Liles MR, et al. A Global Survey of Hypervirulent Aeromonas hydrophila (vAh) Identified vAh Strains in the Lower Mekong River Basin and Diverse Opportunistic Pathogens from Farmed Fish and Other Environmental Sources. Microbiology Spectrum. e0370522. PMID 36815836 DOI: 10.1128/spectrum.03705-22  0.803
2021 Afroj S, Brannen AD, Nasrin S, Al Mouslem A, Hathcock T, Maxwell H, Rasmussen-Ivey CR, Sandage MJ, Davis EW, Panizzi P, Wang C, Liles MR. AP183 Inhibits Biofilm Formation and Proliferation in Murine and Bovine Disease Models. Frontiers in Microbiology. 12: 746410. PMID 34690995 DOI: 10.3389/fmicb.2021.746410  0.784
2021 Barger PC, Liles MR, Beck BH, Newton JC. Correction to: Differential production and secretion of potentially toxigenic extracellular proteins from hypervirulent Aeromonas hydrophila under biofilm and planktonic culture. Bmc Microbiology. 21: 33. PMID 33482719 DOI: 10.1186/s12866-021-02088-3  0.649
2021 Barger PC, Liles MR, Beck BH, Newton JC. Differential production and secretion of potentially toxigenic extracellular proteins from hypervirulent Aeromonas hydrophila under biofilm and planktonic culture. Bmc Microbiology. 21: 8. PMID 33407117 DOI: 10.1186/s12866-020-02065-2  0.695
2020 Santana-Pereira ALR, Sandoval-Powers M, Monsma S, Zhou J, Santos SR, Mead DA, Liles MR. Discovery of Novel Biosynthetic Gene Cluster Diversity From a Soil Metagenomic Library. Frontiers in Microbiology. 11: 585398. PMID 33365020 DOI: 10.3389/fmicb.2020.585398  0.784
2020 Barger PC, Liles MR, Newton JC. Type II Secretion Is Essential for Virulence of the Emerging Fish Pathogen, Hypervirulent . Frontiers in Veterinary Science. 7: 574113. PMID 33088835 DOI: 10.3389/fvets.2020.574113  0.667
2019 Heiss C, Wang Z, Thurlow CM, Hossain MJ, Sun D, Liles MR, Saper MA, Azadi P. Structure of the capsule and lipopolysaccharide O-antigen from the channel catfish pathogen, Aeromonas hydrophila. Carbohydrate Research. 486: 107858. PMID 31683071 DOI: 10.1016/J.Carres.2019.107858  0.759
2019 Warren MF, Hallowell HA, Higgins KV, Liles MR, Hood WR. Maternal Dietary Protein Intake Influences Milk and Offspring Gut Microbial Diversity in a Rat () Model. Nutrients. 11. PMID 31546967 DOI: 10.3390/Nu11092257  0.316
2019 Wang D, Xu Z, Zhang G, Xia L, Dong X, Li Q, Liles MR, Shao J, Shen Q, Zhang R. A genomic island in a plant beneficial rhizobacterium encodes novel antimicrobial fatty acids and a self-protection shield to enhance its competition. Environmental Microbiology. PMID 31106958 DOI: 10.1111/1462-2920.14683  0.345
2019 Thurlow CM, Hossain MJ, Sun D, Barger P, Foshee L, Beck BH, Newton JC, Terhune JS, Saper MA, Liles MR. The gfc operon is involved in the formation of the O antigen capsule in Aeromonas hydrophila and contributes to virulence in channel catfish Aquaculture. 512: 734334. DOI: 10.1016/J.Aquaculture.2019.734334  0.769
2019 Thurlow CM, Williams MA, Carrias A, Ran C, Newman M, Tweedie J, Allison E, Jescovitch LN, Wilson AE, Terhune JS, Liles MR. Bacillus velezensis AP193 exerts probiotic effects in channel catfish (Ictalurus punctatus) and reduces aquaculture pond eutrophication Aquaculture. 503: 347-356. DOI: 10.1016/J.Aquaculture.2018.11.051  0.756
2019 Wang E, Yuan Z, Wang K, Gao D, Liu Z", Liles MR. Consumption of florfenicol-medicated feed alters the composition of the channel catfish intestinal microbiota including enriching the relative abundance of opportunistic pathogens Aquaculture. 501: 111-118. DOI: 10.1016/J.Aquaculture.2018.11.019  0.335
2018 Ran C, Qin C, Xie M, Zhang J, Li J, Xie Y, Wang Y, Li S, Liu L, Fu X, Lin Q, Li N, Liles MR, Zhou Z. Aeromonas veronii and aerolysin are important for the pathogenesis of motile aeromonad septicemia in cyprinid fish. Environmental Microbiology. PMID 30136361 DOI: 10.1111/1462-2920.14390  0.652
2018 Li Y, Liles MR, Halanych KM. Endosymbiont genomes yield clues of tubeworm success. The Isme Journal. PMID 30022157 DOI: 10.1038/S41396-018-0220-Z  0.354
2018 Kumru S, Tekedar HC, Griffin MJ, Waldbieser GC, Liles MR, Sonstegard T, Schroeder SG, Lawrence ML, Karsi A. Draft Genome Sequence of Fish Pathogen Aeromonas bestiarum GA97-22. Genome Announcements. 6. PMID 29903823 DOI: 10.1128/Genomea.00524-18  0.378
2018 Nasrin S, Ganji S, Kakirde KS, Jacob MR, Wang M, Ravu RR, Cobine PA, Khan IA, Wu CC, Mead DA, Li XC, Liles MR. Chloramphenicol Derivatives with Antibacterial Activity Identified by Functional Metagenomics. Journal of Natural Products. PMID 29897754 DOI: 10.1021/Acs.Jnatprod.7B00903  0.793
2018 Wang N, Liu J, Pang M, Wu Y, Awan F, Liles MR, Lu C, Liu Y. Diverse roles of Hcp family proteins in the environmental fitness and pathogenicity of Aeromonas hydrophila Chinese epidemic strain NJ-35. Applied Microbiology and Biotechnology. PMID 29862449 DOI: 10.1007/S00253-018-9116-0  0.395
2018 LaFrentz BR, García JC, Waldbieser GC, Evenhuis JP, Loch TP, Liles MR, Wong FS, Chang SF. Identification of Four Distinct Phylogenetic Groups inWith Fish Host Associations. Frontiers in Microbiology. 9: 452. PMID 29593693 DOI: 10.3389/Fmicb.2018.00452  0.373
2018 Baumgartner WA, Griffin MJ, Tekedar HC, Lawrence ML, Rasmussen-Ivey C, Liles MR. Experience with mortalities of cultured Catfish Ictalurus punctatus (Rafinesque 1818) and I. Punctatus X I. furcatus (valenciennes 1840) caused by highly virulent strains of Aeromonas hydrophila Asian Fisheries Science. 31: 59-75. DOI: 10.33997/J.Afs.2018.31.S1.004  0.772
2018 Wang X, Kweon H, Lee S, Shin H, Chua B, Liles MR, Lee M, Son A. Vulnerability of DNA hybridization in soils is due to Mg2+ ion induced DNA aggregation Soil Biology and Biochemistry. 125: 300-308. DOI: 10.1016/J.Soilbio.2018.08.003  0.344
2017 Lewin A, Zhou J, Pham VTT, Haugen T, Zeiny ME, Aarstad O, Liebl W, Wentzel A, Liles MR. Novel archaeal thermostable cellulases from an oil reservoir metagenome. Amb Express. 7: 183. PMID 28963711 DOI: 10.1186/S13568-017-0485-Z  0.787
2017 Tekedar HC, Kumru S, Kalindamar S, Karsi A, Waldbieser GC, Sonstegard T, Schroeder SG, Liles MR, Griffin MJ, Lawrence ML. Draft Genome Sequences of Three Aeromonas hydrophila Isolates from Catfish and Tilapia. Genome Announcements. 5. PMID 28104665 DOI: 10.1128/Genomea.01509-16  0.398
2017 Figueras MJ, Latif-Eugenín F, Ballester F, Pujol I, Tena D, Berg K, Hossain MJ, Beaz-Hidalgo R, Liles MR. 'Aeromonas intestinalis' and 'Aeromonas enterica' isolated from human faeces, 'Aeromonas crassostreae' from oyster and 'Aeromonas aquatilis' isolated from lake water represent novel species. New Microbes and New Infections. 15: 74-76. PMID 28050251 DOI: 10.1016/J.Nmni.2016.11.019  0.634
2017 Addo S, Carrias AA, Williams MA, Liles MR, Terhune JS, Davis DA. Effects ofBacillus subtilisstrains and the prebiotic Previda®on growth, immune parameters and susceptibility toAeromonas hydrophilainfection in Nile tilapia,Oreochromis niloticus Aquaculture Research. 48: 4798-4810. DOI: 10.1111/Are.13300  0.773
2016 Zhang D, Xu DH, Qiu J, Rasmussen-Ivey CR, Liles MR, Beck BH. Chitin degradation and utilization by virulent Aeromonas hydrophila strain ML10-51K. Archives of Microbiology. PMID 28032191 DOI: 10.1007/S00203-016-1326-1  0.786
2016 Zhang D, Xu DH, Qiu J, Rasmussen-Ivey CR, Liles MR, Beck BH. Draft Genome Sequence of Pseudomonas mosselii Gil3, Isolated from Catfish and Antagonistic against Hypervirulent Aeromonas hydrophila. Genome Announcements. 4. PMID 27856595 DOI: 10.1128/Genomea.01305-16  0.803
2016 Rasmussen-Ivey CR, Hossain MJ, Odom SE, Terhune JS, Hemstreet WG, Shoemaker CA, Zhang D, Xu DH, Griffin MJ, Liu YJ, Figueras MJ, Santos SR, Newton JC, Liles MR. Classification of a Hypervirulent Aeromonas hydrophila Pathotype Responsible for Epidemic Outbreaks in Warm-Water Fishes. Frontiers in Microbiology. 7: 1615. PMID 27803692 DOI: 10.3389/Fmicb.2016.01615  0.817
2016 Bouhajja E, McGuire M, Liles MR, Bataille G, Agathos SN, George IF. Identification of novel toluene monooxygenase genes in a hydrocarbon-polluted sediment using sequence- and function-based screening of metagenomic libraries. Applied Microbiology and Biotechnology. PMID 27785541 DOI: 10.1007/S00253-016-7934-5  0.395
2016 Rasmussen-Ivey CR, Figueras MJ, McGarey D, Liles MR. Virulence Factors of Aeromonas hydrophila: In the Wake of Reclassification. Frontiers in Microbiology. 7: 1337. PMID 27610107 DOI: 10.3389/Fmicb.2016.01337  0.792
2016 Tekedar HC, Kumru S, Karsi A, Waldbieser GC, Sonstegard T, Schroeder SG, Liles MR, Griffin MJ, Lawrence ML. Draft Genome Sequences of Four Virulent Aeromonas hydrophila Strains from Catfish Aquaculture. Genome Announcements. 4. PMID 27540076 DOI: 10.1128/Genomea.00860-16  0.394
2016 Tekedar HC, Kumru S, Karsi A, Waldbieser GC, Sonstegard T, Schroeder SG, Liles MR, Griffin MJ, Lawrence ML. Draft Genome Sequence of Aeromonas hydrophila TN97-08. Genome Announcements. 4. PMID 27231367 DOI: 10.1128/Genomea.00436-16  0.409
2016 Davis RW, Brannen AD, Hossain MJ, Monsma S, Bock PE, Nahrendorf M, Mead D, Lodes M, Liles MR, Panizzi P. Complete genome of Staphylococcus aureus Tager 104 provides evidence of its relation to modern systemic hospital-acquired strains. Bmc Genomics. 17: 179. PMID 26940863 DOI: 10.1186/S12864-016-2433-8  0.625
2016 Newman MM, Lorenz N, Hoilett N, Lee NR, Dick RP, Liles MR, Ramsier C, Kloepper JW. Changes in rhizosphere bacterial gene expression following glyphosate treatment. The Science of the Total Environment. 553: 32-41. PMID 26901800 DOI: 10.1016/J.Scitotenv.2016.02.078  0.676
2016 Addo S, Carrias AA, Williams MA, Liles MR, Terhune JS, Davis DA. Effects ofBacillus subtilisStrains on Growth, Immune Parameters, andStreptococcus iniaeSusceptibility in Nile Tilapia,Oreochromis niloticus Journal of the World Aquaculture Society. 48: 257-267. DOI: 10.1111/Jwas.12380  0.772
2015 Hossain MJ, Thurlow CM, Sun D, Nasrin S, Liles MR. Genome modifications and cloning using a conjugally transferable recombineering system. Biotechnology Reports (Amsterdam, Netherlands). 8: 24-35. PMID 28352570 DOI: 10.1016/J.Btre.2015.08.005  0.802
2015 Mariita RM, Bhatnagar S, Hanselmann K, Hossain MJ, Korlach J, Boitano M, Roberts RJ, Liles MR, Moss AG, Leadbetter JR, Newman DK, Dawson SC. Complete Genome Sequence of Streptomyces sp. Strain CCM_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts. Genome Announcements. 3. PMID 26722012 DOI: 10.1128/Genomea.01506-15  0.6
2015 Mariita RM, Bhatnagar S, Hanselmann K, Hossain MJ, Korlach J, Boitano M, Roberts RJ, Liles MR, Moss AG, Leadbetter JR, Newman DK, Dawson SC. Complete Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts. Genome Announcements. 3. PMID 26722011 DOI: 10.1128/Genomea.01504-15  0.6
2015 Newman MM, Hoilett N, Lorenz N, Dick RP, Liles MR, Ramsier C, Kloepper JW. Glyphosate effects on soil rhizosphere-associated bacterial communities. The Science of the Total Environment. 543: 155-160. PMID 26580738 DOI: 10.1016/J.Scitotenv.2015.11.008  0.658
2015 Fasina YO, Newman MM, Stough JM, Liles MR. Effect of Clostridium perfringens infection and antibiotic administration on microbiota in the small intestine of broiler chickens. Poultry Science. PMID 26567176 DOI: 10.3382/Ps/Pev329  0.797
2015 Hossain MJ, Ran C, Liu K, Ryu CM, Rasmussen-Ivey CR, Williams MA, Hassan MK, Choi SK, Jeong H, Newman M, Kloepper JW, Liles MR. Deciphering the conserved genetic loci implicated in plant disease control through comparative genomics of Bacillus amyloliquefaciens subsp. plantarum. Frontiers in Plant Science. 6: 631. PMID 26347755 DOI: 10.3389/Fpls.2015.00631  0.793
2015 Newman MM, Liles MR, Feminella JW. Litter Breakdown and Microbial Succession on Two Submerged Leaf Species in a Small Forested Stream. Plos One. 10: e0130801. PMID 26098687 DOI: 10.1371/Journal.Pone.0130801  0.673
2015 Nasrin S, Hossain MJ, Liles MR. Draft Genome Sequence of Bacillus amyloliquefaciens AP183 with Antibacterial Activity against Methicillin-Resistant Staphylococcus aureus. Genome Announcements. 3. PMID 25883273 DOI: 10.1128/Genomea.00162-15  0.786
2015 Beaz-Hidalgo R, Latif-Eugenín F, Hossain MJ, Berg K, Niemi RM, Rapala J, Lyra C, Liles MR, Figueras MJ. Aeromonas aquatica sp. nov., Aeromonas finlandiensis sp. nov. and Aeromonas lacus sp. nov. isolated from Finnish waters associated with cyanobacterial blooms. Systematic and Applied Microbiology. 38: 161-8. PMID 25852023 DOI: 10.1016/J.Syapm.2015.02.005  0.602
2015 Ravu RR, Jacob MR, Chen X, Wang M, Nasrin S, Kloepper JW, Liles MR, Mead DA, Khan IA, Li XC. Bacillusin A, an Antibacterial Macrodiolide from Bacillus amyloliquefaciens AP183. Journal of Natural Products. 78: 924-8. PMID 25756620 DOI: 10.1021/Np500911K  0.699
2015 Beaz-Hidalgo R, Hossain MJ, Liles MR, Figueras MJ. Strategies to avoid wrongly labelled genomes using as example the detected wrong taxonomic affiliation for aeromonas genomes in the GenBank database. Plos One. 10: e0115813. PMID 25607802 DOI: 10.1371/Journal.Pone.0115813  0.616
2015 Zhou J, Sun D, Childers A, McDermott TR, Wang Y, Liles MR. Three novel virophage genomes discovered from Yellowstone Lake metagenomes. Journal of Virology. 89: 1278-85. PMID 25392206 DOI: 10.1128/Jvi.03039-14  0.804
2015 Hossain MJ, Ran C, Liu K, Ryu CM, Rasmussen-Ivey CR, Williams MA, Hassan MK, Choi SK, Jeong H, Newman M, Kloepper JW, Liles MR. Deciphering the conserved genetic loci implicated in plant disease control through comparative genomics of Bacillus amyloliquefaciens subsp. plantarum Frontiers in Plant Science. 6. DOI: 10.3389/fpls.2015.00631  0.768
2015 Ravu RR, Jacob MR, Chen X, Wang M, Nasrin S, Kloepper JW, Liles MR, Mead DA, Khan IA, Li XC. Bacillusin A, an antibacterial macrodiolide from Bacillus amyloliquefaciens AP183 Journal of Natural Products. 78: 924-928. DOI: 10.1021/np500911k  0.652
2015 Hossain MJ, Thurlow CM, Sun D, Nasrin S, Liles MR. Genome modifications and cloning using a conjugally transferable recombineering system Biotechnology Reports. 8: 24-35. DOI: 10.1016/j.btre.2015.08.005  0.775
2014 Figueras MJ, Beaz-Hidalgo R, Hossain MJ, Liles MR. Taxonomic affiliation of new genomes should be verified using average nucleotide identity and multilocus phylogenetic analysis. Genome Announcements. 2. PMID 25477398 DOI: 10.1128/Genomea.00927-14  0.606
2014 Hossain MJ, Beaz-Hidalgo R, Figueras MJ, Liles MR. Draft genome sequences of two novel Aeromonas species recovered in association with cyanobacterial blooms. Genome Announcements. 2. PMID 25414500 DOI: 10.1128/Genomea.01181-14  0.613
2014 Chander Y, Koelbl J, Puckett J, Moser MJ, Klingele AJ, Liles MR, Carrias A, Mead DA, Schoenfeld TW. A novel thermostable polymerase for RNA and DNA loop-mediated isothermal amplification (LAMP). Frontiers in Microbiology. 5: 395. PMID 25136338 DOI: 10.3389/Fmicb.2014.00395  0.779
2014 Hossain MJ, Sun D, McGarey DJ, Wrenn S, Alexander LM, Martino ME, Xing Y, Terhune JS, Liles MR. An Asian origin of virulent Aeromonas hydrophila responsible for disease epidemics in United States-farmed catfish. Mbio. 5: e00848-14. PMID 24895303 DOI: 10.1128/Mbio.00848-14  0.726
2013 Hossain MJ, Waldbieser GC, Sun D, Capps NK, Hemstreet WB, Carlisle K, Griffin MJ, Khoo L, Goodwin AE, Sonstegard TS, Schroeder S, Hayden K, Newton JC, Terhune JS, Liles MR. Implication of lateral genetic transfer in the emergence of Aeromonas hydrophila isolates of epidemic outbreaks in channel catfish. Plos One. 8: e80943. PMID 24278351 DOI: 10.1371/Journal.Pone.0080943  0.724
2013 Looper JK, Cotto A, Kim BY, Lee MK, Liles MR, Ní Chadhain SM, Son A. Microbial community analysis of Deepwater Horizon oil-spill impacted sites along the Gulf coast using functional and phylogenetic markers. Environmental Science. Processes & Impacts. 15: 2068-79. PMID 24061682 DOI: 10.1039/C3Em00200D  0.35
2013 Tekedar HC, Waldbieser GC, Karsi A, Liles MR, Griffin MJ, Vamenta S, Sonstegard T, Hossain M, Schroeder SG, Khoo L, Lawrence ML. Complete Genome Sequence of a Channel Catfish Epidemic Isolate, Aeromonas hydrophila Strain ML09-119. Genome Announcements. 1. PMID 24051325 DOI: 10.1128/Genomea.00755-13  0.649
2013 Davis R, Hossain MJ, Liles MR, Panizzi P. Complete Genome Sequence of Staphylococcus aureus Tager 104, a Sequence Type 49 Ancestor. Genome Announcements. 1. PMID 24029757 DOI: 10.1128/Genomea.00706-13  0.621
2013 Zheng H, Chatfield CH, Liles MR, Cianciotto NP. Secreted pyomelanin of Legionella pneumophila promotes bacterial iron uptake and growth under iron-limiting conditions. Infection and Immunity. 81: 4182-91. PMID 23980114 DOI: 10.1128/Iai.00858-13  0.545
2013 Griffin MJ, Goodwin AE, Merry GE, Liles MR, Williams MA, Ware C, Waldbieser GC. Rapid quantitative detection of Aeromonas hydrophila strains associated with disease outbreaks in catfish aquaculture. Journal of Veterinary Diagnostic Investigation : Official Publication of the American Association of Veterinary Laboratory Diagnosticians, Inc. 25: 473-81. PMID 23847227 DOI: 10.1177/1040638713494210  0.645
2013 Morrow KM, Liles MR, Paul VJ, Moss AG, Chadwick NE. Bacterial shifts associated with coral-macroalgal competition in the Caribbean Sea Marine Ecology Progress Series. 488: 103-117. DOI: 10.3354/Meps10394  0.338
2013 Wang X, Liles MR, Son A. Quantification of Escherichia coli O157:H7 in soils using an inhibitor-resistant NanoGene assay Soil Biology and Biochemistry. 58: 9-15. DOI: 10.1016/J.Soilbio.2012.11.016  0.375
2012 Ran C, Carrias A, Williams MA, Capps N, Dan BC, Newton JC, Kloepper JW, Ooi EL, Browdy CL, Terhune JS, Liles MR. Identification of Bacillus strains for biological control of catfish pathogens. Plos One. 7: e45793. PMID 23029244 DOI: 10.1371/Journal.Pone.0045793  0.792
2012 Morrow KM, Moss AG, Chadwick NE, Liles MR. Bacterial associates of two Caribbean coral species reveal species-specific distribution and geographic variability. Applied and Environmental Microbiology. 78: 6438-49. PMID 22773636 DOI: 10.1128/Aem.01162-12  0.354
2012 Hossain MJ, Rahman KhS, Terhune JS, Liles MR. An outer membrane porin protein modulates phage susceptibility in Edwardsiella ictaluri. Microbiology (Reading, England). 158: 474-87. PMID 22135098 DOI: 10.1099/Mic.0.054866-0  0.635
2011 George IF, Hartmann M, Liles MR, Agathos SN. Recovery of as-yet-uncultured soil acidobacteria on dilute solid media. Applied and Environmental Microbiology. 77: 8184-8. PMID 21948845 DOI: 10.1128/Aem.05956-11  0.362
2011 Zhou P, Hussain SK, Liles MR, Arias CR, Backert S, Kieninger J, Oyarzabal OA. A simplified and cost-effective enrichment protocol for the isolation of Campylobacter spp. from retail broiler meat without microaerobic incubation. Bmc Microbiology. 11: 175. PMID 21812946 DOI: 10.1186/1471-2180-11-175  0.309
2011 Parsley LC, Linneman J, Goode AM, Becklund K, George I, Goodman RM, Lopanik NB, Liles MR. Polyketide synthase pathways identified from a metagenomic library are derived from soil Acidobacteria. Fems Microbiology Ecology. 78: 176-87. PMID 21539584 DOI: 10.1111/J.1574-6941.2011.01122.X  0.776
2011 Sudini H, Liles MR, Arias CR, Bowen KL, Huettel RN. Exploring soil bacterial communities in different peanut-cropping sequences using multiple molecular approaches. Phytopathology. 101: 819-27. PMID 21281114 DOI: 10.1094/Phyto-11-10-0310  0.388
2011 Carrias A, Welch TJ, Waldbieser GC, Mead DA, Terhune JS, Liles MR. Comparative genomic analysis of bacteriophages specific to the channel catfish pathogen Edwardsiella ictaluri. Virology Journal. 8: 6. PMID 21214923 DOI: 10.1186/1743-422X-8-6  0.793
2011 Kakirde KS, Wild J, Godiska R, Mead DA, Wiggins AG, Goodman RM, Szybalski W, Liles MR. Gram negative shuttle BAC vector for heterologous expression of metagenomic libraries. Gene. 475: 57-62. PMID 21112378 DOI: 10.1016/J.Gene.2010.11.004  0.811
2011 Sudini H, Arias CR, Liles MR, Bowen KL, Huettel RN. Comparison of soil fungal community structure in different peanut rotation sequences using ribosomal intergenic spacer analysis in relation to aflatoxin-producing fungi. Phytopathology. 101: 52-7. PMID 20822431 DOI: 10.1094/Phyto-03-10-0072  0.361
2011 Morrow KM, Paul VJ, Liles MR, Chadwick NE. Allelochemicals produced by Caribbean macroalgae and cyanobacteria have species-specific effects on reef coral microorganisms Coral Reefs. 30: 309-320. DOI: 10.1007/S00338-011-0747-1  0.353
2011 Parsley LC, Wu C, Mead D, Goodman RM, Liles MR. Soil Microbial DNA Purification Strategies for Multiple Metagenomic Applications Handbook of Molecular Microbial Ecology Ii: Metagenomics in Different Habitats. 109-115. DOI: 10.1002/9781118010549.ch11  0.781
2010 Kakirde KS, Parsley LC, Liles MR. Size Does Matter: Application-driven Approaches for Soil Metagenomics. Soil Biology & Biochemistry. 42: 1911-1923. PMID 21076656 DOI: 10.1016/J.Soilbio.2010.07.021  0.781
2010 Parsley LC, Newman MM, Liles MR. Fluorescence in situ hybridization of bacterial cell suspensions. Cold Spring Harbor Protocols. 2010: pdb.prot5493. PMID 20810640 DOI: 10.1101/Pdb.Prot5493  0.776
2010 Parsley LC, Consuegra EJ, Kakirde KS, Land AM, Harper WF, Liles MR. Identification of diverse antimicrobial resistance determinants carried on bacterial, plasmid, or viral metagenomes from an activated sludge microbial assemblage. Applied and Environmental Microbiology. 76: 3753-7. PMID 20382816 DOI: 10.1128/Aem.03080-09  0.771
2010 Parsley LC, Consuegra EJ, Thomas SJ, Bhavsar J, Land AM, Bhuiyan NN, Mazher MA, Waters RJ, Wommack KE, Harper WF, Liles MR. Census of the viral metagenome within an activated sludge microbial assemblage. Applied and Environmental Microbiology. 76: 2673-7. PMID 20154108 DOI: 10.1128/Aem.02520-09  0.779
2010 Newman MM, Feminella JW, Liles MR. Purification of genomic DNA extracted from environmental sources for use in a polymerase chain reaction. Cold Spring Harbor Protocols. 2010: pdb.prot5383. PMID 20150146 DOI: 10.1101/Pdb.Prot5383  0.654
2010 Schoenfeld T, Liles M, Wommack KE, Polson SW, Godiska R, Mead D. Functional viral metagenomics and the next generation of molecular tools. Trends in Microbiology. 18: 20-9. PMID 19896852 DOI: 10.1016/J.Tim.2009.10.001  0.305
2010 Liles MR, Turkmen O, Manske BF, Zhang M, Rouillard JM, George I, Balser T, Billor N, Goodman RM. A phylogenetic microarray targeting 16S rRNA genes from the bacterial division Acidobacteria reveals a lineage-specific distribution in a soil clay fraction Soil Biology and Biochemistry. 42: 739-747. DOI: 10.1016/J.Soilbio.2010.01.007  0.567
2009 Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Parsley LC, Goodman RM, Handelsman J. Isolation and cloning of high-molecular-weight metagenomic DNA from soil microorganisms. Cold Spring Harbor Protocols. 2009: pdb.prot5271. PMID 20147247 DOI: 10.1101/Pdb.Prot5271  0.782
2009 George IF, Liles MR, Hartmann M, Ludwig W, Goodman RM, Agathos SN. Changes in soil Acidobacteria communities after 2,4,6-trinitrotoluene contamination. Fems Microbiology Letters. 296: 159-66. PMID 19459956 DOI: 10.1111/J.1574-6968.2009.01632.X  0.538
2008 Walakira JK, Carrias AA, Hossain MJ, Jones E, Terhune JS, Liles MR. Identification and characterization of bacteriophages specific to the catfish pathogen, Edwardsiella ictaluri. Journal of Applied Microbiology. 105: 2133-42. PMID 19120659 DOI: 10.1111/J.1365-2672.2008.03933.X  0.78
2008 Srinivasiah S, Bhavsar J, Thapar K, Liles M, Schoenfeld T, Wommack KE. Phages across the biosphere: contrasts of viruses in soil and aquatic environments. Research in Microbiology. 159: 349-57. PMID 18565737 DOI: 10.1016/J.Resmic.2008.04.010  0.31
2008 Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Goodman RM, Handelsman J. Recovery, purification, and cloning of high-molecular-weight DNA from soil microorganisms. Applied and Environmental Microbiology. 74: 3302-5. PMID 18359830 DOI: 10.1128/Aem.02630-07  0.67
2006 Sabree ZL, Bergendahl V, Liles MR, Burgess RR, Goodman RM, Handelsman J. Identification and characterization of the gene encoding the Acidobacterium capsulatum major sigma factor. Gene. 376: 144-51. PMID 16698197 DOI: 10.1016/J.Gene.2006.02.033  0.795
2003 Liles MR, Manske BF, Bintrim SB, Handelsman J, Goodman RM. A census of rRNA genes and linked genomic sequences within a soil metagenomic library. Applied and Environmental Microbiology. 69: 2684-91. PMID 12732537 DOI: 10.1128/Aem.69.5.2684-2691.2003  0.724
2002 Nelson BP, Liles MR, Frederick KB, Corn RM, Goodman RM. Label-free detection of 16S ribosomal RNA hybridization on reusable DNA arrays using surface plasmon resonance imaging. Environmental Microbiology. 4: 735-43. PMID 12460281 DOI: 10.1046/J.1462-2920.2002.00350.X  0.532
2002 Gillespie DE, Brady SF, Bettermann AD, Cianciotto NP, Liles MR, Rondon MR, Clardy J, Goodman RM, Handelsman J. Isolation of antibiotics turbomycin a and B from a metagenomic library of soil microbial DNA. Applied and Environmental Microbiology. 68: 4301-6. PMID 12200279 DOI: 10.1128/Aem.68.9.4301-4306.2002  0.77
2002 Handelsman J, Liles M, Mann D, Riesenfeld C, Goodman RM. Cloning the metagenome: Culture-independent access to thediversity and functions of the uncultivated microbial world Methods in Microbiology. 33: 241-255. DOI: 10.1016/S0580-9517(02)33014-9  0.653
2001 Nelson BP, Grimsrud TE, Liles MR, Goodman RM, Corn RM. Surface plasmon resonance imaging measurements of DNA and RNA hybridization adsorption onto DNA microarrays. Analytical Chemistry. 73: 1-7. PMID 11195491 DOI: 10.1021/Ac0010431  0.496
2000 Rondon MR, August PR, Bettermann AD, Brady SF, Grossman TH, Liles MR, Loiacono KA, Lynch BA, MacNeil IA, Minor C, Tiong CL, Gilman M, Osburne MS, Clardy J, Handelsman J, et al. Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms. Applied and Environmental Microbiology. 66: 2541-7. PMID 10831436 DOI: 10.1128/Aem.66.6.2541-2547.2000  0.734
2000 Liles MR, Scheel TA, Cianciotto NP. Discovery of a nonclassical siderophore, legiobactin, produced by strains of Legionella pneumophila. Journal of Bacteriology. 182: 749-57. PMID 10633110 DOI: 10.1128/Jb.182.3.749-757.2000  0.591
1999 Liles MR, Edelstein PH, Cianciotto NP. The prepilin peptidase is required for protein secretion by and the virulence of the intracellular pathogen Legionella pneumophila. Molecular Microbiology. 31: 959-70. PMID 10048038 DOI: 10.1046/J.1365-2958.1999.01239.X  0.588
1998 Liles MR, Viswanathan VK, Cianciotto NP. Identification and temperature regulation of Legionella pneumophila genes involved in type IV pilus biogenesis and type II protein secretion. Infection and Immunity. 66: 1776-82. PMID 9529113 DOI: 10.1128/Iai.66.4.1776-1782.1998  0.612
1996 Liles MR, Cianciotto NP. Absence of siderophore-like activity in Legionella pneumophila supernatants. Infection and Immunity. 64: 1873-5. PMID 8613408 DOI: 10.1128/Iai.64.5.1873-1875.1996  0.581
Low-probability matches (unlikely to be authored by this person)
2012 Morrow KM, Ritson-Williams R, Ross C, Liles MR, Paul VJ. Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals. Plos One. 7: e44859. PMID 23028648 DOI: 10.1371/Journal.Pone.0044859  0.298
2021 Sandoval-Powers M, Králová S, Nguyen GS, Fawwal DV, Degnes K, Lewin AS, Klinkenberg G, Wentzel A, Liles MR. Streptomyces poriferorum sp. nov., a novel marine sponge-derived Actinobacteria species expressing anti-MRSA activity. Systematic and Applied Microbiology. 44: 126244. PMID 34392062 DOI: 10.1016/j.syapm.2021.126244  0.293
2022 Churchman EM, Parello G, Lange MD, Farmer BD, LaFrentz BR, Beck BH, Liles MR. Draft Genome Sequences of Strains LSU-066-04 and LV-359-01. Microbiology Resource Announcements. e0035222. PMID 35703564 DOI: 10.1128/mra.00352-22  0.288
2021 Azzam-Sayuti M, Ina-Salwany MY, Zamri-Saad M, Annas S, Yusof MT, Monir MS, Mohamad A, Muhamad-Sofie MHN, Lee JY, Chin YK, Amir-Danial Z, Asyiqin A, Lukman B, Liles MR, Amal MNA. Comparative Pathogenicity of spp. in Cultured Red Hybrid Tilapia (). Biology. 10. PMID 34827185 DOI: 10.3390/biology10111192  0.284
2023 Abernathy JW, Zhang D, Liles MR, Lange MD, Shoemaker CA, Beck BH. Whole-Genome Sequencing and Annotation of Aeromonas veronii Isolates from Channel Catfish. Microbiology Resource Announcements. e0123122. PMID 36700629 DOI: 10.1128/mra.01231-22  0.282
2021 Králová S, Sandoval-Powers M, Fawwal DV, Degnes KF, Lewin AS, Klinkenberg G, Nguyen GS, Liles MR, Wentzel A. sp. nov.: A Slow-Growing Actinobacterium Producing Candicidin, Isolated From Sediments of the Trondheim Fjord. Frontiers in Microbiology. 12: 714233. PMID 34421874 DOI: 10.3389/fmicb.2021.714233  0.271
2022 Azzam-Sayuti M, Ina-Salwany MY, Zamri-Saad M, Annas S, Liles MR, Xu T, Amal MNA, Yusof MT. Draft genome sequence of -inositol utilizing 1P11S3 isolated from striped catfish ( in a local fish farm in Malaysia. Data in Brief. 41: 107974. PMID 35252492 DOI: 10.1016/j.dib.2022.107974  0.267
2020 Wang E, Yuan Z, Wang K, Gao D, Liu Z", Liles MR. Corrigendum to “Consumption of florfenicol-medicated feed alters the composition of the channel catfish intestinal microbiota including enriching the relative abundance of opportunistic pathogens” [Aquaculture Volume 501, (2019), Pages 111–118] Aquaculture. 516: 734313. DOI: 10.1016/J.Aquaculture.2019.734313  0.245
2023 Santana-Pereira ALR, Moen FS, Severance B, Liles MR. Influence of soil nutrients on the presence and distribution of CPR bacteria in a long-term crop rotation experiment. Frontiers in Microbiology. 14: 1114548. PMID 37577441 DOI: 10.3389/fmicb.2023.1114548  0.243
2013 Engel K, Ashby D, Brady SF, Cowan DA, Doemer J, Edwards EA, Fiebig K, Martens EC, McCormac D, Mead DA, Miyazaki K, Moreno-Hagelsieb G, O'Gara F, Reid A, Rose DR, ... ... Liles MR, et al. Meeting report: 1st international functional metagenomics workshop may 7-8, 2012, st. Jacobs, ontario, Canada. Standards in Genomic Sciences. 8: 106-11. PMID 23961315 DOI: 10.4056/Sigs.3406845  0.239
2017 Sloan AWN, Santana-Pereira ALR, Goswami J, Liles MR, Davis VA. Single-Walled Carbon Nanotube Dispersion in Tryptic Soy Broth Acs Macro Letters. 6: 1228-1231. DOI: 10.1021/Acsmacrolett.7B00656  0.231
2023 Aroh O, Liles MR, Halanych KM. Genomic characterization of a novel, widely distributed Mycoplasma species "Candidatus Mycoplasma mahonii" associated with the brittlestar Gorgonocephalus chilensis. Plos One. 18: e0290305. PMID 37616244 DOI: 10.1371/journal.pone.0290305  0.231
1994 Miceli MV, Liles MR, Newsome DA. Evaluation of oxidative processes in human pigment epithelial cells associated with retinal outer segment phagocytosis. Experimental Cell Research. 214: 242-9. PMID 8082727 DOI: 10.1006/Excr.1994.1254  0.225
2013 Wu Y, Wang K, Buschle-Diller G, Liles MR. Fiber formation by dehydration-induced aggregation of albumin Journal of Applied Polymer Science. 129: 3591-3600. DOI: 10.1002/App.38771  0.216
1991 Liles MR, Newsome DA, Oliver PD. Antioxidant enzymes in the aging human retinal pigment epithelium. Archives of Ophthalmology (Chicago, Ill. : 1960). 109: 1285-8. PMID 1929958 DOI: 10.1001/Archopht.1991.01080090111033  0.208
2007 Shi J, Aono S, Lu W, Ouellette AJ, Hu X, Ji Y, Wang L, Lenz S, van Ginkel FW, Liles M, Dykstra C, Morrison EE, Elson CO. A novel role for defensins in intestinal homeostasis: regulation of IL-1beta secretion. Journal of Immunology (Baltimore, Md. : 1950). 179: 1245-53. PMID 17617617 DOI: 10.4049/Jimmunol.179.2.1245  0.2
1992 Newsome D, Oliver P, Tate D, Miceli M, Liles M. Antioxidant activity and aging of the human macula Experimental Eye Research. 55: 253. DOI: 10.1016/0014-4835(92)91115-E  0.199
2013 Liles MR. Branches: ASM Activities at the Local Level Microbe Magazine. 8: 295-297. DOI: 10.1128/Microbe.8.295.2  0.196
2021 Wise AL, LaFrentz BR, Kelly AM, Khoo LH, Xu T, Liles MR, Bruce TJ. A Review of Bacterial Co-Infections in Farmed Catfish: Components, Diagnostics, and Treatment Directions. Animals : An Open Access Journal From Mdpi. 11. PMID 34827972 DOI: 10.3390/ani11113240  0.183
1992 Miceli M, Liles M, Oliver P, Newsome D. The RPE respiratory burst is intracellular Experimental Eye Research. 55: 202. DOI: 10.1016/0014-4835(92)90930-Q  0.181
2022 Noor MM, Santana-Pereira ALR, Liles MR, Davis VA. Dispersant Effects on Single-Walled Carbon Nanotube Antibacterial Activity. Molecules (Basel, Switzerland). 27. PMID 35268706 DOI: 10.3390/molecules27051606  0.178
2021 LaFrentz BR, Králová S, Burbick CR, Alexander TL, Phillips CW, Griffin MJ, Waldbieser GC, García JC, de Alexandre Sebastião F, Soto E, Loch TP, Liles MR, Snekvik KR. The fish pathogen Flavobacterium columnare represents four distinct species: Flavobacterium columnare, Flavobacterium covae sp. nov., Flavobacterium davisii sp. nov. and Flavobacterium oreochromis sp. nov., and emended description of Flavobacterium columnare. Systematic and Applied Microbiology. 45: 126293. PMID 35026686 DOI: 10.1016/j.syapm.2021.126293  0.177
2023 Padeniya U, Davis DA, Liles MR, LaFrentz SA, LaFrentz BR, Shoemaker CA, Beck BH, Wells DE, Bruce TJ. Probiotics enhance resistance to Streptococcus iniae in Nile tilapia (Oreochromis niloticus) reared in biofloc systems. Journal of Fish Diseases. PMID 37422900 DOI: 10.1111/jfd.13833  0.17
2019 Hassan MK, McInroy JA, Jones J, Shantharaj D, Liles MR, Kloepper JW. Pectin-Rich Amendment Enhances Soybean Growth Promotion and Nodulation Mediated by Strains. Plants (Basel, Switzerland). 8. PMID 31075893 DOI: 10.3390/plants8050120  0.169
1994 Newsome DA, Miceli MV, Liles MR, Tate DJ, Oliver PD. Antioxidants in the retinal pigment epithelium Progress in Retinal and Eye Research. 13: 101-123. DOI: 10.1016/1350-9462(94)90006-X  0.165
2024 Wise AL, LaFrentz BR, Kelly AM, Liles MR, Griffin MJ, Beck BH, Bruce TJ. Coinfection of channel catfish (Ictalurus punctatus) with virulent Aeromonas hydrophila and Flavobacterium covae exacerbates mortality. Journal of Fish Diseases. PMID 38214100 DOI: 10.1111/jfd.13912  0.158
2022 Nguyen KQ, Bruce TJ, Afe OE, Liles MR, Beck BH, Davis DA. Growth Performance, Survival, Blood Chemistry, and Immune Gene Expression of Channel Catfish () Fed Probiotic-Supplemented Diets. Veterinary Sciences. 9. PMID 36548862 DOI: 10.3390/vetsci9120701  0.157
2020 Jin H, Yoon Y, Liles MR, Chua B, Son A. A simple reagent-less approach using electrical discharge as a substitution for chelating agent in addressing genomic assay inhibition by divalent cations. The Analyst. PMID 33000771 DOI: 10.1039/d0an01666g  0.15
2021 Hassan MK, Lawrence KS, Sikora EJ, Liles MR, Kloepper JW. Enhanced biological control of root-knot nematode, , by combined inoculation of cotton or soybean seeds with a plant growth-promoting rhizobacterium and pectin-rich orange peel. Journal of Nematology. 53. PMID 34250503 DOI: 10.21307/jofnem-2021-058  0.143
2011 Wommack KE, Srinivasiah S, Liles MR, Bhavsar J, Bench S, Williamson KE, Polson SW. Metagenomic Contrasts of Viruses in Soil and Aquatic Environments Handbook of Molecular Microbial Ecology Ii: Metagenomics in Different Habitats. 25-36. DOI: 10.1002/9781118010549.ch4  0.142
2022 Jin H, Lim HJ, Liles MR, Chua B, Son A. Switchable inhibitory behavior of divalent magnesium ion in DNA hybridization-based gene quantification. The Analyst. PMID 36129343 DOI: 10.1039/d2an01164f  0.14
2023 Wise AL, LaFrentz BR, Kelly AM, Liles MR, Griffin MJ, Beck BH, Bruce TJ. The Infection Dynamics of Experimental and Coinfection in Channel Catfish (). Pathogens (Basel, Switzerland). 12. PMID 36986384 DOI: 10.3390/pathogens12030462  0.122
2022 Pacheco da Silva ML, Moen FS, Liles MR, Feng Y, Sanz-Saez A. The Response to Inoculation with PGPR Plus Orange Peel Amendment on Soybean Is Cultivar and Environment Dependent. Plants (Basel, Switzerland). 11. PMID 35567141 DOI: 10.3390/plants11091138  0.117
2017 Sloan AWN, Santana-Pereira ALR, Goswami J, Liles MR, Davis VA. Single-Walled Carbon Nanotube Dispersion in Tryptic Soy Broth. Acs Macro Letters. 6: 1228-1231. PMID 35650799 DOI: 10.1021/acsmacrolett.7b00656  0.085
2011 Lawitz E, Gruener D, Hill J, Marbury T, Komjathy S, DeMicco M, Murillo A, Jenkin F, Kim K, Simpson J, Aycock M, Mathias A, Yang C, Dowdy E, Liles M, et al. 1219 THREE-DAY, DOSE-RANGING STUDY OF THE HCV NS5A INHIBITOR GS-5885 Journal of Hepatology. 54: S481-S482. DOI: 10.1016/S0168-8278(11)61221-X  0.01
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