German Rosas-Acosta - Related publications

Biological Sciences University of Texas at El Paso, El Paso, TX, United States 
Virology Biology, Microbiology Biology, Molecular Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Meyers JM, Ramanathan M, Shanderson RL, Donohue L, Ferguson I, Guo MG, Rao DS, Miao W, Reynolds D, Yang X, Zhao Y, Yang YY, Wang Y, Khavari PA. The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation. Biorxiv : the Preprint Server For Biology. PMID 33655243 DOI: 10.1101/2021.02.23.432450   
2021 Wang ZH, Ke F, Zhang QY, Gui JF. Structural and Functional Diversity among Five RING Finger Proteins from Carassius Auratus Herpesvirus (CaHV). Viruses. 13. PMID 33562288 DOI: 10.3390/v13020254   
2021 Beyer T, Klose F, Kuret A, Hoffmann F, Lukowski R, Ueffing M, Boldt K. Tissue- and isoform-specific protein complex analysis with natively processed bait proteins. Journal of Proteomics. 231: 103947. PMID 32853754 DOI: 10.1016/j.jprot.2020.103947   
2021 Zhang X, Thielert M, Li H, Cravatt BF. SPIN4 Is a Principal Endogenous Substrate of the E3 Ubiquitin Ligase DCAF16. Biochemistry. PMID 33636084 DOI: 10.1021/acs.biochem.1c00067   
2021 Meignié A, Combredet C, Santolini M, Kovács IA, Douché T, Gianetto QG, Eun H, Matondo M, Jacob Y, Grailhe R, Tangy F, Komarova AV. Proteomic Analysis Uncovers Measles Virus Protein C Interaction with p65/iASPP Protein Complex. Molecular & Cellular Proteomics : McP. 100049. PMID 33515806 DOI: 10.1016/j.mcpro.2021.100049   
2021 Simard JR, Lee L, Vieux E, Improgo R, Tieu T, Phillips AJ, Fisher SL, Pollock RM, Park E. High-Throughput Quantitative Assay Technologies for Accelerating the Discovery and Optimization of Targeted Protein Degradation Therapeutics. Slas Discovery : Advancing Life Sciences R & D. 2472555220985049. PMID 33430712 DOI: 10.1177/2472555220985049   
2021 Wang JY, Zhang W, Roehrl MW, Roehrl VB, Roehrl MH. An Autoantigen Profile of Human A549 Lung Cells Reveals Viral and Host Etiologic Molecular Attributes of Autoimmunity in COVID-19. Biorxiv : the Preprint Server For Biology. PMID 33655248 DOI: 10.1101/2021.02.21.432171   
2021 Campbell KL, Haspel N, Gath C, Kurniatash N, Nouduri Akkiraju I, Stuffers N, Vadher U. Protein Hormone Fragmentation in Intercellular Signaling: Hormones as Nested Information Systems†. Biology of Reproduction. PMID 33403392 DOI: 10.1093/biolre/ioaa234   
2021 Nagar N, Ecker N, Loewenthal G, Avram O, Ben-Meir D, Biran D, Ron E, Pupko T. Harnessing Machine Learning To Unravel Protein Degradation in Escherichia coli. Msystems. 6. PMID 33531410 DOI: 10.1128/mSystems.01296-20   
2021 Karagöz IK, Munk MR, Kaya M, Rückert R, Yıldırım M, Karabaş L. Using bioinformatic protein sequence similarity to investigate if SARS CoV-2 infection could cause an ocular autoimmune inflammatory reactions? Experimental Eye Research. 203: 108433. PMID 33400927 DOI: 10.1016/j.exer.2020.108433   
2021 Herrera NG, Morano NC, Celikgil A, Georgiev GI, Malonis RJ, Lee JH, Tong K, Vergnolle O, Massimi AB, Yen LY, Noble AJ, Kopylov M, Bonanno JB, Garrett-Thomson SC, Hayes DB, et al. Characterization of the SARS-CoV-2 S Protein: Biophysical, Biochemical, Structural, and Antigenic Analysis. Acs Omega. 6: 85-102. PMID 33458462 DOI: 10.1021/acsomega.0c03512   
2021 Huang L, Qu X, Chen Y, Xu W, Huang C. Sandwiched-fusion strategy facilitates recombinant production of small labile proteins. Protein Science : a Publication of the Protein Society. PMID 33433908 DOI: 10.1002/pro.4024   
2021 Shakir S, Jander G, Nahid N, Mubin M, Younus A, Nawaz-Ul-Rehman MS. Interaction of eukaryotic proliferating cell nuclear antigen (PCNA) with the replication-associated protein (Rep) of cotton leaf curl Multan virus and pedilanthus leaf curl virus. 3 Biotech. 11: 14. PMID 33442513 DOI: 10.1007/s13205-020-02499-5   
2021 Huang LF, Sinaga DS, Tan CC, Hsieh SM, Huang CH. Expression of Recombinant Human Octamer-Binding Transcription Factor 4 in Rice Suspension Cells. International Journal of Molecular Sciences. 22. PMID 33573352 DOI: 10.3390/ijms22031409   
2021 Aweida D, Cohen S. Breakdown of Filamentous Myofibrils by the UPS-Step by Step. Biomolecules. 11. PMID 33467597 DOI: 10.3390/biom11010110   
2021 Romero-Suarez D, Wulff T, Rong Y, Jakočiu Nas T, Yuzawa S, Keasling JD, Jensen MK. A Reporter System for Cytosolic Protein Aggregates in Yeast. Acs Synthetic Biology. PMID 33577304 DOI: 10.1021/acssynbio.0c00476   
2021 Skruber K, Read TA, Vitriol EA. Delivering defined amounts of purified protein with high precision into living cells. Star Protocols. 2: 100272. PMID 33511357 DOI: 10.1016/j.xpro.2020.100272   
2021 Wang T, Guan W, Du Y, Xu Y, He Z, Zhang Y, Kang C, Wan X, Chi X, Sun K, Zhang X. Proteome-wide analyses reveal diverse functions of acetylation proteins in Neurospora crassa. Proteomics. e2000212. PMID 33491270 DOI: 10.1002/pmic.202000212   
2021 Ward TL, Tai W, Morton SU, Impens F, VanDamme P, Van Haver D, Timmerman E, Venturini G, Zhang K, Jang MY, Willcox JA, Haghighi A, Gelb BD, Chung WK, Goldmuntz E, et al. Mechanisms of Congenital Heart Disease Caused by NAA15 Haploinsufficiency. Circulation Research. PMID 33557580 DOI: 10.1161/CIRCRESAHA.120.316966   
2021 Pedicini L, Wiktor SD, Simmons KJ, Money A, McKeown L. Affinity-based proteomics reveals novel binding partners for Rab46 in endothelial cells. Scientific Reports. 11: 4054. PMID 33603063 DOI: 10.1038/s41598-021-83560-y   
2021 Haridhasapavalan KK, Ranjan SH, Bhattacharyya S, Thummer RP. Soluble expression, purification, and secondary structure determination of human MESP1 transcription factor. Applied Microbiology and Biotechnology. PMID 33651130 DOI: 10.1007/s00253-021-11194-1   
2021 Yang X, McMahon M, Ramachandran S, Garrett W, LeBlanc N, Crouch JA, Shishkoff N, Luster D. Comparative analysis of extracellular proteomes reveals putative effectors of the boxwood blight pathogens, Calonectria henricotiae and C. pseudonaviculata. Bioscience Reports. PMID 33619567 DOI: 10.1042/BSR20203544   
2021 Panigrahi R, Glover JNM. Structural insights into DNA double-strand break signaling. The Biochemical Journal. 478: 135-156. PMID 33439989 DOI: 10.1042/BCJ20200066   
2021 Zheng L, Wang X, Guo D, Cao J, Cheng L, Li X, Zou D, Zhang Y, Xu J, Wu X, Shen Y, Wang H, Yu W, Li L, Xiao L, et al. Porcine epidemic diarrhea virus E protein suppresses RIG-I signaling-mediated interferon-β production. Veterinary Microbiology. 254: 108994. PMID 33486326 DOI: 10.1016/j.vetmic.2021.108994   
2021 Gladyck S, Aras S, Hüttemann M, Grossman LI. Regulation of COX Assembly and Function by Twin CXC Proteins-Implications for Human Disease. Cells. 10. PMID 33498264 DOI: 10.3390/cells10020197   
2021 Cardone C, Caseau CM, Pereira N, Sizun C. Pneumoviral Phosphoprotein, a Multidomain Adaptor-Like Protein of Apparent Low Structural Complexity and High Conformational Versatility. International Journal of Molecular Sciences. 22. PMID 33546457 DOI: 10.3390/ijms22041537   
2021 Duś-Szachniewicz K, Rymkiewicz G, Agrawal AK, Kołodziej P, Wiśniewski JR. Large-Scale Proteomic Analysis of Follicular Lymphoma Reveals Extensive Remodeling of Cell Adhesion Pathway and Identifies Hub Proteins Related to the Lymphomagenesis. Cancers. 13. PMID 33562532 DOI: 10.3390/cancers13040630   
2021 Vishweshwaraiah YL, Chen J, Dokholyan NV. Engineering an Allosteric Control of Protein Function. The Journal of Physical Chemistry. B. PMID 33566608 DOI: 10.1021/acs.jpcb.0c11640   
2021 Chen M, Horn HT, Wen T, Cryns VL, Anderson RA. Assessing In Situ Phosphoinositide-Protein Interactions Through Fluorescence Proximity Ligation Assay in Cultured Cells. Methods in Molecular Biology (Clifton, N.J.). 2251: 133-142. PMID 33481236 DOI: 10.1007/978-1-0716-1142-5_9   
2021 Zhao N, Jia L, He X, Zhang B. Proteomics of mucosal exosomes of Cynoglossus semilaevis altered when infected by Vibrio harveyi. Developmental and Comparative Immunology. 104045. PMID 33582105 DOI: 10.1016/j.dci.2021.104045   
2021 Yang Y, Xue J, Teng Q, Li X, Bu Y, Zhang G. Mechanisms and consequences of Newcastle disease virus W protein subcellular localization in the nucleus or mitochondria. Journal of Virology. PMID 33441338 DOI: 10.1128/JVI.02087-20   
2021 Lee JH, Ryu SW, Ender NA, Paull TT. Poly-ADP-ribosylation drives loss of protein homeostasis in ATM and Mre11 deficiency. Molecular Cell. PMID 33571423 DOI: 10.1016/j.molcel.2021.01.019   
2021 Cao W, Qin X, Wang Y, Dai Z, Dai X, Wang H, Xuan W, Zhang Y, Liu Y, Liu T. A general supramolecular approach to regulate protein functions by cucurbit[7]uril and unnatural amino acid recognition. Angewandte Chemie (International Ed. in English). PMID 33580548 DOI: 10.1002/anie.202100916   
2021 Zhang N, Zhang L, Li L, Geng J, Zhao L, Ren Y, Dong Z, Chen F. Global Profiling of 2-hydroxyisobutyrylome in Common Wheat. Genomics, Proteomics & Bioinformatics. PMID 33581340 DOI: 10.1016/j.gpb.2020.06.008   
2021 Bhatwa A, Wang W, Hassan YI, Abraham N, Li XZ, Zhou T. Challenges Associated With the Formation of Recombinant Protein Inclusion Bodies in and Strategies to Address Them for Industrial Applications. Frontiers in Bioengineering and Biotechnology. 9: 630551. PMID 33644021 DOI: 10.3389/fbioe.2021.630551   
2021 Zhang J, He S. Tobacco System for Studying Protein Colocalization and Interactions. Methods in Molecular Biology (Clifton, N.J.). 2297: 167-174. PMID 33656681 DOI: 10.1007/978-1-0716-1370-2_18   
2021 Gruebele M, Pielak GJ. Dynamical spectroscopy and microscopy of proteins in cells. Current Opinion in Structural Biology. 70: 1-7. PMID 33662744 DOI: 10.1016/   
2021 Gulzar B, Mujib A, Rajam MV, Zafar N, Mamgain J, Malik M, Syeed R, Ejaz B. Shotgun label-free proteomic and biochemical study of somatic embryos (cotyledonary and maturation stage) in (L.) G. Don. 3 Biotech. 11: 86. PMID 33505840 DOI: 10.1007/s13205-021-02649-3   
2021 Bonfá G, Cella F, Siciliano V. Engineering Protein-Based Parts for Genetic Devices in Mammalian Cells. Methods in Molecular Biology (Clifton, N.J.). 2229: 331-346. PMID 33405230 DOI: 10.1007/978-1-0716-1032-9_16   
2021 James J, Yarnall B, Koranteng A, Gibson J, Rahman T, Doyle DA. Protein over-expression in Escherichia coli triggers adaptation analogous to antimicrobial resistance. Microbial Cell Factories. 20: 13. PMID 33430875 DOI: 10.1186/s12934-020-01462-6   
2021 Zhang G, Zhong F, Chen L, Qin P, Li J, Zhi F, Tian L, Zhou D, Lin P, Chen H, Tang K, Liu W, Jin Y, Wang A. Integrated Proteomic and Transcriptomic Analyses Reveal the Roles of Homolog of BAX Inhibitor 1 in Cell Division and Membrane Homeostasis of S2. Frontiers in Microbiology. 12: 632095. PMID 33584633 DOI: 10.3389/fmicb.2021.632095   
2021 Wang JY, Zhang W, Roehrl MW, Roehrl VB, Roehrl MH. An Autoantigen Atlas from Human Lung HFL1 Cells Offers Clues to Neurological and Diverse Autoimmune Manifestations of COVID-19. Biorxiv : the Preprint Server For Biology. PMID 33501444 DOI: 10.1101/2021.01.24.427965   
2021 Bornberg-Bauer E, Hlouchova K, Lange A. Structure and function of naturally evolved de novo proteins. Current Opinion in Structural Biology. 68: 175-183. PMID 33567396 DOI: 10.1016/   
2021 Ren YR, Zhao Q, Yang YY, Zhang TE, Wang XF, You CX, Hao YJ. The apple 14-3-3 protein MdGRF11 interacts with the BTB protein MdBT2 to regulate nitrate deficiency-induced anthocyanin accumulation. Horticulture Research. 8: 22. PMID 33518703 DOI: 10.1038/s41438-020-00457-z   
2021 Huang S, Zheng F, Lin H, Zhou X, Xu H, Zhang C, Dai W, Hocher B, Zhang X, Tang D, Dai Y. Quantitative proteomics analysis of lysine 2-hydroxyisobutyrylation in IgA nephropathy. Clinical Proteomics. 18: 7. PMID 33557746 DOI: 10.1186/s12014-021-09314-0   
2021 Luo L, Li Z, Zhao T, Ju X, Ma P, Jin B, Zhou Y, He S, Huang J, Xu X, Zou Y, Li P, Liang A, Liu J, Chi T, et al. SARS-CoV-2 nucleocapsid protein phase separates with G3BPs to disassemble stress granules and facilitate viral production. Science Bulletin. PMID 33495715 DOI: 10.1016/j.scib.2021.01.013   
2021 Meng H, Sun M, Jiang Z, Liu Y, Sun Y, Liu D, Jiang C, Ren M, Yuan G, Yu W, Feng Q, Yang A, Cheng L, Wang Y. Comparative transcriptome analysis reveals resistant and susceptible genes in tobacco cultivars in response to infection by Phytophthora nicotianae. Scientific Reports. 11: 809. PMID 33436928 DOI: 10.1038/s41598-020-80280-7   
2021 Baker HA, Bernardini JP. It's not just a phase; ubiquitination in cytosolic protein quality control. Biochemical Society Transactions. 49: 365-377. PMID 33634825 DOI: 10.1042/BST20200694   
2021 Jiang H, Ma QJ, Zhong MS, Gao HN, Li YY, Hao YJ. The apple palmitoyltransferase MdPAT16 influences sugar content and salt tolerance via an MdCBL1-MdCIPK13-MdSUT2.2 pathway. The Plant Journal : For Cell and Molecular Biology. PMID 33548154 DOI: 10.1111/tpj.15191   
2021 Biswas A, Raran-Kurussi S, Narayan A, Kar A, Chandra Mashurabad P, Bhattacharyya MK, Mandal K. Efficient refolding and functional characterization of AMA1(DI+DII) expressed in . Biochemistry and Biophysics Reports. 26: 100950. PMID 33665380 DOI: 10.1016/j.bbrep.2021.100950