Cindy Nakatsu - Publications

Affiliations: 
Agronomy Purdue University, West Lafayette, IN, United States 
Area:
Microbiology Biology, Nutrition

93 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Bai X, Nakatsu CH, Bhunia AK. Bacterial Biofilms and Their Implications in Pathogenesis and Food Safety. Foods (Basel, Switzerland). 10. PMID 34574227 DOI: 10.3390/foods10092117  1
2021 Oladele P, Li E, Lu H, Cozannet P, Nakatsu C, Johnson T, Adeola O, Ajuwon KM. Effect of a Carbohydrase Admixture in Growing Pigs Fed Wheat-Based Diets in Thermoneutral and Heat Stress Conditions. Journal of Animal Science. PMID 34460910 DOI: 10.1093/jas/skab254  1
2021 Byappanahalli MN, Nevers MB, Shively D, Nakatsu CH, Kinzelman JL, Phanikumar MS. Influence of Filter Pore Size on Composition and Relative Abundance of Bacterial Communities and Select Host-Specific MST Markers in Coastal Waters of Southern Lake Michigan. Frontiers in Microbiology. 12: 665664. PMID 34335496 DOI: 10.3389/fmicb.2021.665664  1
2021 Kong Y, Kozik A, Nakatsu CH, Jones-Hall YL, Chun H. A zero-inflated non-negative matrix factorization for the deconvolution of mixed signals of biological data. The International Journal of Biostatistics. PMID 33783171 DOI: 10.1515/ijb-2020-0039  1
2021 French E, Kaplan I, Iyer-Pascuzzi A, Nakatsu CH, Enders L. Emerging strategies for precision microbiome management in diverse agroecosystems. Nature Plants. PMID 33686226 DOI: 10.1038/s41477-020-00830-9  0.01
2021 Cladis DP, Simpson AMR, Cooper KJ, Nakatsu CH, Ferruzzi MG, Weaver CM. Blueberry polyphenols alter gut microbiota & phenolic metabolism in rats. Food & Function. PMID 33629093 DOI: 10.1039/d0fo03457f  1
2020 Liu KY, Nakatsu CH, Jones-Hall Y, Kozik A, Jiang Q. Alpha- and gamma-tocopherol mitigate colitis, protect intestinal barrier function and modulate the gut microbiota in mice. Free Radical Biology & Medicine. PMID 33352218 DOI: 10.1016/j.freeradbiomed.2020.12.017  1
2020 Yang C, Zhao Y, Im S, Nakatsu C, Jones-Hall Y, Jiang Q. Vitamin E delta-tocotrienol and metabolite 13'-carboxychromanol inhibit colitis-associated colon tumorigenesis and modulate gut microbiota in mice: Tocotrienol and 13'-carboxychromanol modulate gut microbiota. The Journal of Nutritional Biochemistry. 108567. PMID 33347911 DOI: 10.1016/j.jnutbio.2020.108567  1
2020 Sato AY, Pellegrini GG, Cregor M, McAndrews K, Choi RB, Maiz M, Johnson O, McCabe LD, McCabe GP, Ferruzzi MG, Lila MA, Peacock M, Burr DB, Nakatsu CH, Weaver CM, et al. Skeletal protection and promotion of microbiome diversity by dietary boosting of the endogenous antioxidant response. Journal of Bone and Mineral Research : the Official Journal of the American Society For Bone and Mineral Research. PMID 33316081 DOI: 10.1002/jbmr.4231  1
2020 Kinzelman J, Byappanahalli MN, Nevers MB, Shively D, Kurdas S, Nakatsu C. Utilization of multiple microbial tools to evaluate efficacy of restoration strategies to improve recreational water quality at a Lake Michigan Beach (Racine, WI). Journal of Microbiological Methods. 106049. PMID 32891633 DOI: 10.1016/J.Mimet.2020.106049  1
2020 Palacios C, Trak-Fellermeier, Pérez CM, Huffman F, Hernandez Suarez Y, Bursac Z, Gambon TB, Nakatsu CH, Weaver CM. Effect of soluble corn fiber supplementation for 1 year on bone metabolism in children, the MetA-bone trial: Rationale and design. Contemporary Clinical Trials. 106061. PMID 32574844 DOI: 10.1016/J.Cct.2020.106061  1
2020 Nevers MB, Byappanahalli MN, Nakatsu CH, Kinzelman JL, Phanikumar MS, Shively DA, Spoljaric AM. Interaction of bacterial communities and indicators of water quality in shoreline sand, sediment, and water of Lake Michigan. Water Research. 178: 115671. PMID 32380294 DOI: 10.1016/J.Watres.2020.115671  1
2019 Kozik AJ, Nakatsu CH, Chun H, Jones-Hall YL. Comparison of the fecal, cecal, and mucus microbiome in male and female mice after TNBS-induced colitis. Plos One. 14: e0225079. PMID 31703107 DOI: 10.1371/journal.pone.0225079  1
2019 Zhao Y, Nakatsu C, Jiang Q. A Grape Powder Attenuates Colonic Inflammation, Inhibits Colitis-associated Colorectal Cancer Development and Causes Favorable Changes of Gut Microbiota in Mice (OR04-07-19). Current Developments in Nutrition. 3. PMID 31224334 DOI: 10.1093/cdn/nzz030.OR04-07-19  1
2019 Nakatsu CH, Byappanahalli MN, Nevers MB. Bacterial Community 16S rRNA Gene Sequencing Characterizes Riverine Microbial Impact on Lake Michigan. Frontiers in Microbiology. 10: 996. PMID 31139161 DOI: 10.3389/Fmicb.2019.00996  1
2018 Nevins CJ, Nakatsu C, Armstrong S. Characterization of microbial community response to cover crop residue decomposition Soil Biology & Biochemistry. 127: 39-49. DOI: 10.1016/J.Soilbio.2018.09.015  0.01
2017 Kozik AJ, Nakatsu CH, Chun H, Jones-Hall YL. Age, sex, and TNF associated differences in the gut microbiota of mice and their impact on acute TNBS colitis. Experimental and Molecular Pathology. 103: 311-319. PMID 29175304 DOI: 10.1016/j.yexmp.2017.11.014  1
2017 Zhang X, Xu JR, Nakatsu CH. Draft Genome Sequence of Pseudomonas fluorescens Strain TR3, a Potential Biocontrol Agent against the Rice Blast Fungus Magnaporthe oryzae. Genome Announcements. 5. PMID 29167257 DOI: 10.1128/genomeA.01332-17  0.01
2017 Hillman ET, Lu H, Yao T, Nakatsu CH. [Microbial Ecology along the Gastrointestinal Tract]. Microbes and Environments. PMID 29129876 DOI: 10.1264/jsme2.ME17017  1
2016 Whisner CM, Martin BR, Nakatsu CH, Story JA, MacDonald-Clarke CJ, McCabe LD, McCabe GP, Weaver CM. Soluble Corn Fiber Increases Calcium Absorption Associated with Shifts in the Gut Microbiome: A Randomized Dose-Response Trial in Free-Living Pubertal Females. The Journal of Nutrition. PMID 27281813 DOI: 10.3945/Jn.115.227256  1
2016 Jones-Hall YL, Nakatsu CH. The Intersection of TNF, IBD and the Microbiome. Gut Microbes. 7: 58-62. PMID 26939853 DOI: 10.1080/19490976.2015.1121364  1
2016 Yan H, Lu H, Almeida VV, Ward MG, Adeola O, Nakatsu CH, Ajuwon KM. Effects of dietary resistant starch content on metabolic status, milk composition, and microbial profiling in lactating sows and on offspring performance. Journal of Animal Physiology and Animal Nutrition. PMID 26848026 DOI: 10.1111/jpn.12440  1
2016 Lu H, Yan H, O'Neill HM, Bradley CL, Bedford M, Wilcock P, Nakatsu C, Adeola O, Ajuwon KM. 0928 Effect of xylanase and live yeast supplementation on growth performance and gut microflora diversity of growing pigs Journal of Animal Science. 94: 447-447. DOI: 10.2527/Jam2016-0928  1
2016 Lu H, Yan H, O’Neill HM, Bradley CL, Bedford M, Wilcock P, Nakatsu C, Adeola O, Ajuwon KM. 0927 Effect of timing of post-weaning supplementation of xylanase on growth performance, nutrient digestibility and fecal microbial composition in weanling pigs. Journal of Animal Science. 94: 446-446. DOI: 10.2527/Jam2016-0927  1
2016 Traoré L, Babana H, Antoun H, Lahbib M, Sacko O, Nakatsu C, Stott D. Isolation of Six Phosphate Dissolving Rhizosphere Bacteria (Bacillus subtilis) and Their Effects on the Growth, Phosphorus Nutrition and Yield of Maize (Zea mays L.) in Mali Journal of Agricultural Science and Technology: B. 6. DOI: 10.17265/2161-6264/2016.02.005  0.01
2015 Jones-Hall YL, Kozik A, Nakatsu C. Correction: Ablation of tumor necrosis factor is associated with decreased inflammation and alterations of the microbiota in a mouse model of inflammatory bowel disease. Plos One. 10: e0125309. PMID 25860670 DOI: 10.1371/journal.pone.0125309  1
2015 Jones-Hall YL, Kozik A, Nakatsu C. Ablation of tumor necrosis factor is associated with decreased inflammation and alterations of the microbiota in a mouse model of inflammatory bowel disease. Plos One. 10: e0119441. PMID 25775453 DOI: 10.1371/Journal.Pone.0119441  1
2015 Suseela V, Alpert P, Nakatsu CH, Armstrong A, Tharayil N. Plant-soil interactions regulate the identity of soil carbon in invaded ecosystems: Implication for legacy effects Functional Ecology. DOI: 10.1111/1365-2435.12591  1
2014 Tanaka T, Kawasaki K, Daimon S, Kitagawa W, Yamamoto K, Tamaki H, Tanaka M, Nakatsu CH, Kamagata Y. A hidden pitfall in the preparation of agar media undermines microorganism cultivability. Applied and Environmental Microbiology. 80: 7659-66. PMID 25281372 DOI: 10.1128/AEM.02741-14  1
2014 Nakatsu CH, Armstrong A, Clavijo AP, Martin BR, Barnes S, Weaver CM. Fecal bacterial community changes associated with isoflavone metabolites in postmenopausal women after soy bar consumption. Plos One. 9: e108924. PMID 25271941 DOI: 10.1371/Journal.Pone.0108924  1
2014 Whisner CM, Martin BR, Nakatsu CH, McCabe GP, McCabe LD, Peacock M, Weaver CM. Soluble maize fibre affects short-term calcium absorption in adolescent boys and girls: a randomised controlled trial using dual stable isotopic tracers. The British Journal of Nutrition. 112: 446-56. PMID 24848974 DOI: 10.1017/S0007114514000981  1
2014 Baldwin BR, Ogles D, Nakatsu CH. Monitoring microbial community dynamics to evaluate bioremediation Biodegradative Bacteria: How Bacteria Degrade, Survive, Adapt, and Evolve. 293-312. DOI: 10.1007/978-4-431-54520-0_15  1
2013 Utami NW, Sone T, Tanaka M, Nakatsu CH, Saito A, Asano K. Comparison of Yacon (Smallanthus sonchifolius) Tuber with Commercialized Fructo-oligosaccharides (FOS) in Terms of Physiology, Fermentation Products and Intestinal Microbial Communities in Rats. Bioscience of Microbiota, Food and Health. 32: 167-78. PMID 24936376 DOI: 10.12938/bmfh.32.167  1
2013 Nakatsu CH, Barabote R, Thompson S, Bruce D, Detter C, Brettin T, Han C, Beasley F, Chen W, Konopka A, Xie G. Complete genome sequence of Arthrobacter sp. strain FB24. Standards in Genomic Sciences. 9: 106-16. PMID 24501649 DOI: 10.4056/Sigs.4438185  1
2013 Mayumi D, Dolfing J, Sakata S, Maeda H, Miyagawa Y, Ikarashi M, Tamaki H, Takeuchi M, Nakatsu CH, Kamagata Y. Carbon dioxide concentration dictates alternative methanogenic pathways in oil reservoirs. Nature Communications. 4: 1998. PMID 23759740 DOI: 10.1038/ncomms2998  1
2013 Yan H, Potu R, Lu H, Vezzoni de Almeida V, Stewart T, Ragland D, Armstrong A, Adeola O, Nakatsu CH, Ajuwon KM. Dietary fat content and fiber type modulate hind gut microbial community and metabolic markers in the pig. Plos One. 8: e59581. PMID 23573202 DOI: 10.1371/journal.pone.0059581  1
2013 Whisner CM, Martin BR, Schoterman MH, Nakatsu CH, McCabe LD, McCabe GP, Wastney ME, van den Heuvel EG, Weaver CM. Galacto-oligosaccharides increase calcium absorption and gut bifidobacteria in young girls: a double-blind cross-over trial. The British Journal of Nutrition. 110: 1292-303. PMID 23507173 DOI: 10.1017/S000711451300055X  1
2013 Dewi Puspita I, Uehara M, Katayama T, Kikuchi Y, Kitagawa W, Kamagata Y, Asano K, Nakatsu CH, Tanaka M. Resuscitation promoting factor (Rpf) from Tomitella biformata AHU 1821(T) promotes growth and resuscitates non-dividing cells. Microbes and Environments / Jsme. 28: 58-64. PMID 23100022 DOI: DN/JST.JSTAGE/jsme2/ME12122  1
2013 Whisner CM, Nakatsu CH, Martin BR, McCabe LD, McCabe GP, Weaver CM. Soluble corn fiber modulates calcium absorption by altering colonic microbiota The Faseb Journal. 27. DOI: 10.1096/Fasebj.27.1_Supplement.1056.1  1
2012 Puspita ID, Kamagata Y, Tanaka M, Asano K, Nakatsu CH. Are uncultivated bacteria really uncultivable? Microbes and Environments / Jsme. 27: 356-66. PMID 23059723 DOI: DN/JST.JSTAGE/jsme2/ME12092  1
2012 Nasuno E, Kimura N, Fujita MJ, Nakatsu CH, Kamagata Y, Hanada S. Phylogenetically novel LuxI/LuxR-type quorum sensing systems isolated using a metagenomic approach. Applied and Environmental Microbiology. 78: 8067-74. PMID 22983963 DOI: 10.1128/AEM.01442-12  1
2012 Stephen KE, Homrighausen D, DePalma G, Nakatsu CH, Irudayaraj J. Surface enhanced Raman spectroscopy (SERS) for the discrimination of Arthrobacter strains based on variations in cell surface composition. The Analyst. 137: 4280-6. PMID 22842541 DOI: 10.1039/C2An35578G  1
2011 Weaver CM, Martin BR, Nakatsu CH, Armstrong AP, Clavijo A, McCabe LD, McCabe GP, Duignan S, Schoterman MH, van den Heuvel EG. Galactooligosaccharides improve mineral absorption and bone properties in growing rats through gut fermentation. Journal of Agricultural and Food Chemistry. 59: 6501-10. PMID 21553845 DOI: 10.1021/Jf2009777  1
2011 Henne KL, Turse JE, Nakatsu CH, Konopka AE. Protein Expression Profile of an Environmentally Important Bacterial Strain: The Chromate Response of Arthrobacter Species Strain FB24 Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. 663-674. DOI: 10.1002/9781118010518.ch70  1
2010 Ariefdjohan MW, Savaiano DA, Nakatsu CH. Comparison of DNA extraction kits for PCR-DGGE analysis of human intestinal microbial communities from fecal specimens. Nutrition Journal. 9: 23. PMID 20492702 DOI: 10.1186/1475-2891-9-23  1
2010 Kong W, Nakatsu CH. Optimization of RNA extraction for PCR quantification of aromatic compound degradation genes. Applied and Environmental Microbiology. 76: 1282-4. PMID 20023086 DOI: 10.1128/AEM.01939-09  1
2009 Henne KL, Nakatsu CH, Thompson DK, Konopka AE. High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes. Bmc Microbiology. 9: 199. PMID 19758450 DOI: 10.1186/1471-2180-9-199  1
2009 Kourtev PS, Nakatsu CH, Konopka A. Inhibition of nitrate reduction by chromium (VI) in anaerobic soil microcosms. Applied and Environmental Microbiology. 75: 6249-57. PMID 19684175 DOI: 10.1128/Aem.00347-09  1
2009 Nebe J, Baldwin BR, Kassab RL, Nies L, Nakatsu CH. Quantification of aromatic oxygenase genes to evaluate enhanced bioremediation by oxygen releasing materials at a gasoline-contaminated site. Environmental Science & Technology. 43: 2029-34. PMID 19368209 DOI: 10.1021/Es900146F  1
2009 Henne KL, Turse JE, Nicora CD, Lipton MS, Tollaksen SL, Lindberg C, Babnigg G, Giometti CS, Nakatsu CH, Thompson DK, Konopka AE. Global proteomic analysis of the chromate response in Arthrobacter sp. strain FB24. Journal of Proteome Research. 8: 1704-16. PMID 19231868 DOI: 10.1021/Pr800705F  1
2009 Baldwin BR, Nakatsu CH, Nebe J, Wickham GS, Parks C, Nies L. Enumeration of aromatic oxygenase genes to evaluate biodegradation during multi-phase extraction at a gasoline-contaminated site. Journal of Hazardous Materials. 163: 524-30. PMID 18706759 DOI: 10.1016/J.Jhazmat.2008.07.002  1
2008 Jerke K, Nakatsu CH, Beasley F, Konopka A. Comparative analysis of eight Arthrobacter plasmids. Plasmid. 59: 73-85. PMID 18241920 DOI: 10.1016/J.Plasmid.2007.12.003  1
2008 Baldwin BR, Nakatsu CH, Nies L. Enumeration of aromatic oxygenase genes to evaluate monitored natural attenuation at gasoline-contaminated sites. Water Research. 42: 723-31. PMID 17707876 DOI: 10.1016/J.Watres.2007.07.052  1
2007 Liu J, Lee LS, Nies LF, Nakatsu CH, Turcot RF. Biotransformation of 8:2 fluorotelomer alcohol in soil and by soil bacteria isolates. Environmental Science & Technology. 41: 8024-30. PMID 18186332 DOI: 10.1021/Es0708722  1
2007 Konopka A, Carrero-Colon M, Nakatsu CH. Community dynamics and heterogeneities in mixed bacterial communities subjected to nutrient periodicities. Environmental Microbiology. 9: 1584-90. PMID 17504495 DOI: 10.1111/J.1462-2920.2007.01326.X  1
2007 Park J, Wilbur JD, Ghosh JK, Nakatsu CH, Ackerman C. Selection of binary variables and classification by boosting Communications in Statistics: Simulation and Computation. 36: 855-869. DOI: 10.1080/03610910701419729  1
2006 Carrero-Colón M, Nakatsu CH, Konopka A. Microbial community dynamics in nutrient-pulsed chemostats. Fems Microbiology Ecology. 57: 1-8. PMID 16819944 DOI: 10.1111/J.1574-6941.2006.00095.X  1
2006 Carrero-Colón M, Nakatsu CH, Konopka A. Effect of nutrient periodicity on microbial community dynamics. Applied and Environmental Microbiology. 72: 3175-83. PMID 16672455 DOI: 10.1128/Aem.72.5.3175-3183.2006  1
2006 Nakatsu CH, Hristova K, Hanada S, Meng XY, Hanson JR, Scow KM, Kamagata Y. Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria. International Journal of Systematic and Evolutionary Microbiology. 56: 983-9. PMID 16627642 DOI: 10.1099/Ijs.0.63524-0  1
2006 Vargha M, Takáts Z, Konopka A, Nakatsu CH. Optimization of MALDI-TOF MS for strain level differentiation of Arthrobacter isolates. Journal of Microbiological Methods. 66: 399-409. PMID 16513195 DOI: 10.1016/J.Mimet.2006.01.006  1
2006 Becker JM, Parkin T, Nakatsu CH, Wilbur JD, Konopka A. Bacterial activity, community structure, and centimeter-scale spatial heterogeneity in contaminated soil. Microbial Ecology. 51: 220-31. PMID 16463134 DOI: 10.1007/S00248-005-0002-9  1
2006 Joynt J, Bischoff M, Turco R, Konopka A, Nakatsu CH. Microbial community analysis of soils contaminated with lead, chromium and petroleum hydrocarbons. Microbial Ecology. 51: 209-19. PMID 16463132 DOI: 10.1007/S00248-005-0205-0  1
2006 Kourtev PS, Nakatsu CH, Konopka A. Responses of the anaerobic bacterial community to addition of organic C in chromium(VI)- and iron(III)-amended microcosms. Applied and Environmental Microbiology. 72: 628-37. PMID 16391100 DOI: 10.1128/Aem.72.1.628-637.2006  1
2005 Nakatsu CH, Carmosini N, Baldwin B, Beasley F, Kourtev P, Konopka A. Soil microbial community responses to additions of organic carbon substrates and heavy metals (Pb and Cr). Applied and Environmental Microbiology. 71: 7679-89. PMID 16332740 DOI: 10.1128/Aem.71.12.7679-7689.2005  1
2005 Maldonado Y, Fiser JC, Nakatsu CH, Bhunia AK. Cytotoxicity potential and genotypic characterization of Escherichia coli isolates from environmental and food sources. Applied and Environmental Microbiology. 71: 1890-8. PMID 15812017 DOI: 10.1128/Aem.71.4.1890-1898.2005  1
2004 Mesarch MB, Nakatsu CH, Nies L. Bench-scale and field-scale evaluation of catechol 2,3-dioxygenase specific primers for monitoring BTX bioremediation. Water Research. 38: 1281-8. PMID 14975661 DOI: 10.1016/J.Watres.2003.10.052  1
2003 Ritter KJ, Carruthers E, Carson CA, Ellender RD, Harwood VJ, Kingsley K, Nakatsu C, Sadowsky M, Shear B, West B, Whitlock JE, Wiggins BA, Wilbur JD. Assessment of statistical methods used in library-based approaches to microbial source tracking. Journal of Water and Health. 1: 209-23. PMID 15382725 DOI: 10.2166/Wh.2003.0022  1
2003 Myoda SP, Carson CA, Fuhrmann JJ, Hahm BK, Hartel PG, Yampara-Lquise H, Johnson L, Kuntz RL, Nakatsu CH, Sadowsky MJ, Samadpour M. Comparison of genotypic-based microbial source tracking methods requiring a host origin database. Journal of Water and Health. 1: 167-80. PMID 15382722 DOI: 10.2166/Wh.2003.0019  1
2003 Baldwin BR, Nakatsu CH, Nies L. Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR. Applied and Environmental Microbiology. 69: 3350-8. PMID 12788736 DOI: 10.1128/Aem.69.6.3350-3358.2003  1
2003 Hahm BK, Maldonado Y, Schreiber E, Bhunia AK, Nakatsu CH. Subtyping of foodborne and environmental isolates of Escherichia coli by multiplex-PCR, rep-PCR, PFGE, ribotyping and AFLP. Journal of Microbiological Methods. 53: 387-99. PMID 12689716 DOI: 10.1016/S0167-7012(02)00259-2  1
2002 Konopka A, Zakharova T, Nakatsu C. Effect of starvation length upon microbial activity in a biomass recycle reactor. Journal of Industrial Microbiology & Biotechnology. 29: 286-291. PMID 12407465 DOI: 10.1038/Sj.Jim.7000322  1
2002 LaPara TM, Zakharova T, Nakatsu CH, Konopka A. Functional and structural adaptations of bacterial communities growing on particulate substrates under stringent nutrient limitation Microbial Ecology. 44: 317-326. PMID 12399897 DOI: 10.1007/S00248-002-1046-8  1
2002 Wilbur JD, Ghosh JK, Nakatsu CH, Brouder SM, Doerge RW. Variable selection in high-dimensional multivariate binary data with application to the analysis of microbial community DNA fingerprints. Biometrics. 58: 378-86. PMID 12071411 DOI: 10.1111/J.0006-341X.2002.00378.X  1
2002 Curtis P, Nakatsu CH, Konopka A. Aciduric Proteobacteria isolated from pH 2.9 soil. Archives of Microbiology. 178: 65-70. PMID 12070771 DOI: 10.1007/S00203-002-0427-1  1
2002 Morgan CA, Hudson A, Konopka A, Nakatsu CH. Analyses of microbial activity in biomass-recycle reactors using denaturing gradient gel electrophoresis of 16S rDNA and 16S rRNA PCR products. Canadian Journal of Microbiology. 48: 333-41. PMID 12030706 DOI: 10.1139/W02-029  1
2002 LaPara TM, Nakatsu CH, Pantea LM, Alleman JE. Stability of the bacterial communities supported by a seven-stage biological process treating pharmaceutical wastewater as revealed by PCR-DGGE. Water Research. 36: 638-46. PMID 11827326 DOI: 10.1016/S0043-1354(01)00277-9  1
2001 LaPara TM, Nakatsu CH, Pantea LM, Alleman JE. Aerobic biological treatment of a pharmaceutical wastewater: Effect of temperature on COD removal and bacterial community development Water Research. 35: 4417-4425. PMID 11763044 DOI: 10.1016/S0043-1354(01)00178-6  1
2001 Sigler WV, Nakatsu CH, Reicher ZJ, Turco RF. Fate of the biological control agent Pseudomonas aureofaciens TX-1 after application to turfgrass. Applied and Environmental Microbiology. 67: 3542-8. PMID 11472930 DOI: 10.1128/Aem.67.8.3542-3548.2001  1
2001 LaPara TM, Konopka A, Nakatsu CH, Alleman JE. Thermophilic aerobic treatment of a synthetic wastewater in a membrane-coupled bioreactor Journal of Industrial Microbiology and Biotechnology. 26: 203-209. PMID 11464370 DOI: 10.1038/Sj.Jim.7000110  1
2000 Lapara TM, Nakatsu CH, Pantea L, Alleman JE. Phylogenetic analysis of bacterial communities in mesophilic and thermophilic bioreactors treating pharmaceutical wastewater Applied and Environmental Microbiology. 66: 3951-3959. PMID 10966414 DOI: 10.1128/Aem.66.9.3951-3959.2000  1
2000 Mesarch MB, Nakatsu CH, Nies L. Development of catechol 2,3-dioxygenase-specific primers for monitoring bioremediation by competitive quantitative PCR Applied and Environmental Microbiology. 66: 678-683. PMID 10653735 DOI: 10.1128/Aem.66.2.678-683.2000  1
2000 Lapara TM, Konopka A, Nakatsu CH, Alleman JE. Thermophilic aerobic wastewater treatment in continuous-flow bioreactors Journal of Environmental Engineering. 126: 739-744. DOI: 10.1061/(Asce)0733-9372(2000)126:8(739)  1
2000 LaPara TM, Konopka A, Nakatsu CH, Alleman JE. Effects of elevated temperature on bacterial community structure and function in bioreactors treating a synthetic wastewater Journal of Industrial Microbiology and Biotechnology. 24: 140-145. DOI: 10.1038/Sj.Jim.2900790  1
2000 Huang X, Lee LS, Nakatsu C. Impact of animal waste lagoon effluents on chlorpyrifos degradation in soils Environmental Toxicology and Chemistry. 19: 2864-2870. DOI: 10.1002/Etc.5620191202  1
1999 Konopka A, Bercot T, Nakatsu C. Bacterioplankton community diversity in a series of thermally stratified lakes Microbial Ecology. 38: 126-135. PMID 10441705 DOI: 10.1007/S002489900166  1
1999 Konopka A, Zakharova T, Bischoff M, Oliver L, Nakatsu C, Turco RF. Microbial biomass and activity in lead-contaminated soil Applied and Environmental Microbiology. 65: 2256-9. PMID 10224032 DOI: 10.1128/Aem.65.5.2256-2259.1999  1
1998 Nakatsu CH, Korona R, Lenski RE, de Bruijn FJ, Marsh TL, Forney LJ. Parallel and divergent genotypic evolution in experimental populations of Ralstonia sp. Journal of Bacteriology. 180: 4325-31. PMID 9721265 DOI: 10.1128/Jb.180.17.4325-4331.1998  1
1997 Hogan DA, Buckley DH, Nakatsu CH, Schmidt TM, Hausinger RP. Distribution of the tfda gene in soil bacteria that do not degrade 2,4-dichlorophenoxyacetic acid (2,4-D) Microbial Ecology. 34: 90-96. DOI: 10.1007/s002489900038  1
1996 Matheson VG, Forney LJ, Suwa Y, Nakatsu CH, Sexstone AJ, Holben WE. Evidence for acquisition in nature of a chromosomal 2,4- dichlorophenoxyacetic acid/α-ketoglutarate dioxygenase gene by different Burkholderia spp Applied and Environmental Microbiology. 62: 2457-2463.  1
1995 Nakatsu CH, Fulthorpe RR, Holland BA, Peel MC, Wyndham RC. The phylogenetic distribution of a transposable dioxygenase from the Niagara River watershed Molecular Ecology. 4: 593-603. PMID 7582167 DOI: 10.1111/j.1365-294X.1995.tb00259.x  1
1994 Korona R, Nakatsu CH, Forney LJ, Lenski RE. Evidence for multiple adaptive peaks from populations of bacteria evolving in a structured habitat. Proceedings of the National Academy of Sciences of the United States of America. 91: 9037-41. PMID 8090765 DOI: 10.1073/Pnas.91.19.9037  1
1991 Nakatsu C, Ng J, Singh R, Straus N, Wyndham C. Chlorobenzoate catabolic transposon Tn5271 is a composite class I element with flanking class II insertion sequences Proceedings of the National Academy of Sciences of the United States of America. 88: 8312-8316. PMID 1656436 DOI: 10.1073/Pnas.88.19.8312  1
1988 Nakatsu C, Hutchinson TC. Extreme metal and acid tolerance ofEuglena mutabilis and an associated yeast from Smoking Hills, Northwest Territories, and their apparent mutualism. Microbial Ecology. 16: 213-31. PMID 24201573 DOI: 10.1007/BF02018915  1
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